Photobacterium toruni strain WD2103 plasmid unnamed4, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.
Photobacterium toruni isolated from olive flounder(Paralichthys olivaceus) in Korea: pathogenicity and completed genome sequences
Submitted (21-JUL-2022) Department of Aqualife Medical Sciences, Chonnam National University, 50, Daehak-ro, Yeosu-si, Yeosu 59626, South Korea
REFSEQ INFORMATION: The reference sequence is identical to\nCP101699.1.\nBacteria and source DNA available from Department of Aqualife\nMedicine, Chonnam National University, Yeosu, Republic of\nKorea-59626.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 25-MAR-2021\nAssembly Method :: Unicycler v. V0.4.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/31/2022 10:22:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 4,319\nCDSs (total) :: 4,037\nGenes (coding) :: 3,963\nCDSs (with protein) :: 3,963\nGenes (RNA) :: 282\nrRNAs :: 22, 20, 20 (5S, 16S, 23S)\ncomplete rRNAs :: 22, 20, 20 (5S, 16S, 23S)\ntRNAs :: 216\nncRNAs :: 4\nPseudo Genes (total) :: 74\nCDSs (without protein) :: 74\nPseudo Genes (ambiguous residues) :: 0 of 74\nPseudo Genes (frameshifted) :: 18 of 74\nPseudo Genes (incomplete) :: 51 of 74\nPseudo Genes (internal stop) :: 22 of 74\nPseudo Genes (multiple problems) :: 14 of 74\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.