Glutamicibacter halophytocola strain KLBMP 5180 plasmid pKLBMP5180, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae; Glutamicibacter.
Submitted (09-JUL-2015) The Key Lab of Biotechnology for Medicinal Plants of Jiangsu Province, Jiangsu Normal University, No.101 Shanghai Road, Xuzhou, Jiangsu 210000, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP012751.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: DEC-2014\nAssembly Method :: Celera Assembler v. 8.2\nAssembly Name :: KLBMP5180\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: Illumina MiSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 18:47:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,658\nCDSs (total) :: 3,572\nGenes (coding) :: 3,557\nCDSs (with protein) :: 3,557\nGenes (RNA) :: 86\nrRNAs :: 7, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 6, 6 (5S, 16S, 23S)\ntRNAs :: 64\nncRNAs :: 3\nPseudo Genes (total) :: 15\nCDSs (without protein) :: 15\nPseudo Genes (ambiguous residues) :: 0 of 15\nPseudo Genes (frameshifted) :: 3 of 15\nPseudo Genes (incomplete) :: 9 of 15\nPseudo Genes (internal stop) :: 5 of 15\nPseudo Genes (multiple problems) :: 2 of 15\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Inner tissues of halophyte Limonium sinense (Girard) Kuntze
type strain of Glutamicibacter halophytocola
COORDINATES: similar to AA sequence:RefSeq:WP_013347356.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_013347353.1
COORDINATES: similar to AA sequence:RefSeq:WP_013347351.1
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_013347350.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: protein motif:HMM:NF021640.2