Candidatus Erwinia haradaeae strain ErCicurvipes voucher 3402 plasmid pBio.
type: Entry
definition: Candidatus Erwinia haradaeae strain ErCicurvipes voucher 3402 plasmid pBio.
sequence version: NZ_LR217714.1
sequence date: 2022-12-27
sequence: sequence
division: CON
label: NZ_LR217714.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA5379129
keyword: RefSeq
source: Candidatus Erwinia haradaeae
organism: Candidatus Erwinia haradaeae
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Erwinia.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR217714.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/27/2022 01:59:34\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 675\nCDSs (total) :: 633\nGenes (coding) :: 618\nCDSs (with protein) :: 618\nGenes (RNA) :: 42\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 36\nncRNAs :: 3\nPseudo Genes (total) :: 15\nCDSs (without protein) :: 15\nPseudo Genes (ambiguous residues) :: 0 of 15\nPseudo Genes (frameshifted) :: 7 of 15\nPseudo Genes (incomplete) :: 9 of 15\nPseudo Genes (internal stop) :: 1 of 15\nPseudo Genes (multiple problems) :: 1 of 15\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 36062
topology: linear
so has quality: SO_0000987
location: 1..36062
location: region:1-36062:1
RO_0002162: 1922217

NZ_LR217714
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA5379129
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Manzano-Marin, A.
journal: Submitted (27-FEB-2019) Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062), Adaptation of plant-eaters, their natural enemies and their symbionts, 755 avenue du campus Agropolis, CS 30016, F-34988 Montferrier-sur-Lez, France

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36062:1
position: 36062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-36062:1:source
so part of: sequence
organism: Candidatus Erwinia haradaeae
mol type: genomic DNA
strain: ErCicurvipes
isolate: 3402
isolation source: host's whole body
host: Cinara curvipes
specimen voucher: 3402
plasmid: pBio
lat lon: 48.675722 N 116.946698 W
collection date: 2013-08-20
collected by: Armelle Coeur d'acier; Emmanuelle Jousselin

1922217
type: Taxonomy
SIO_000068: taxonomy

HACICURV3402_RS03285
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03285
old locus tag: E4U99_RS03285
old locus tag: ERCICURV3402_663
so part of: sequence
location: complement(1575..2630)
location: region:1575-2630:-1
so has part: feature:1575-2630:-1:exon
subclass of: SO_0000010

66304936
type: Gene
SIO_000068: ncbigene

position:1575:-1
position: 1575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2630:-1
position: 2630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1575-2630:-1:exon

HACICURV3402_RS03285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03285
old locus tag: E4U99_RS03285
old locus tag: ERCICURV3402_663
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708261.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Replication protein
translation: MNNNTVMLQESDQVVYRQTRRGEANCQRKGQVKTHRNHQPQFTGKIPRGMAAKVMACIKNHDWRQNSDLIALRKNGYTPYSRIFDRSYQPKPLRITVRSESREALSALSLALAANCDYSPYSQYMFEVILPIAEIAQRMGVLHVYNNGRKAYDVLLHALRVLEQLDYVIVHRGRESDSGQNKPMRVFLTENFFTSRGMNVESVRQWLHKYRQWAISAGISVSLRSKYERHQLKMARLGIDIDRHHSLKNRLKSIKRWVVSPELFNEKESIIADLNTYLIAHKKQRILSRNLSEVRYQMAWWAWSASDACTPVIRLNLENAIKTEFPHLLNHSTSTEQYYRLLLERAGIPLP
SIO_010081: HACICURV3402_RS03285
subclass of: SO_0000673
so part of: HACICURV3402_RS03285
location: complement(1575..2630)
location: region:1575-2630:-1
so has part: feature:1575-2630:-1:exon

WP_157992939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1575-2630:-1:exon

HACICURV3402_RS03290
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03290
old locus tag: E4U99_RS03290
so part of: sequence
location: complement(2623..2781)
location: region:2623-2781:-1
so has part: feature:2623-2781:-1:exon
subclass of: SO_0000010

66304937
type: Gene
SIO_000068: ncbigene

position:2623:-1
position: 2623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2781:-1
position: 2781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2623-2781:-1:exon

HACICURV3402_RS03290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03290
old locus tag: E4U99_RS03290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVVRCKNPSILRQLGGRTRDRGVVYRLMPVKDYNECILKKQHLSAIRFGQGE
SIO_010081: HACICURV3402_RS03290
subclass of: SO_0000673
so part of: HACICURV3402_RS03290
location: complement(2623..2781)
location: region:2623-2781:-1
so has part: feature:2623-2781:-1:exon

WP_157992940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2623-2781:-1:exon

HACICURV3402_RS03295
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
gene: bioB
locus tag: HACICURV3402_RS03295
old locus tag: E4U99_RS03295
old locus tag: ERCICURV3402_664
so part of: sequence
location: complement(4955..5992)
location: region:4955-5992:-1
so has part: feature:4955-5992:-1:exon
subclass of: SO_0000010

66304938
type: Gene
SIO_000068: ncbigene

position:4955:-1
position: 4955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5992:-1
position: 5992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4955-5992:-1:exon

HACICURV3402_RS03295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
gene: bioB
locus tag: HACICURV3402_RS03295
old locus tag: E4U99_RS03295
old locus tag: ERCICURV3402_664
EC number: 2.8.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013183852.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin synthase BioB
translation: MSIPQRWTTEQVRSLFDQPFFDLLFKAQQIHRQHFISGEIQVSTLLSIKTGACPEDCKYCPQSARYNSGIQREDLIEVQKVLDAAEKARKAGSTRFCMGAAWKNPRDRDMPLLEEMVKGVKAMGLETCMTLGMINNDQAQQLAKAGLDFYNHNLDTSPEFYNEIITTRSYQDRLDTLSTIRQAGIKICSGGIVGMGENINDRAGLLVQLANLPIQPESVPINMLVKSPGTPLSDASDVDPFDFIRTIAVARIMMPNSYVRLSAGREQMNEQTQALCFMAGTNSVFYGCKLLTAPNPDEDHDLRLFKKLGLTIQHKKISEGNQEQEKNLTESLLSLDTDKYYNAAH
SIO_010081: HACICURV3402_RS03295
subclass of: SO_0000673
so part of: HACICURV3402_RS03295
location: complement(4955..5992)
location: region:4955-5992:-1
so has part: feature:4955-5992:-1:exon

WP_157992941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4955-5992:-1:exon

HACICURV3402_RS03300
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
gene: bioA
locus tag: HACICURV3402_RS03300
old locus tag: E4U99_RS03300
old locus tag: ERCICURV3402_665
so part of: sequence
location: 6096..7397
location: region:6096-7397:1
so has part: feature:6096-7397:1:exon
subclass of: SO_0000010

66304939
type: Gene
SIO_000068: ncbigene

position:6096:1
position: 6096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7397:1
position: 7397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6096-7397:1:exon

HACICURV3402_RS03300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
gene: bioA
locus tag: HACICURV3402_RS03300
old locus tag: E4U99_RS03300
old locus tag: ERCICURV3402_665
EC number: 2.6.1.62
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410763.1
GO function: GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylmethionine--8-amino-7-oxononanoate transaminase
translation: MQADDLAFDKRHVWHPYTSMTQPLPTYPIVSASGCELILRDGRRLVDGMSSWWAAIHGYNHPTINQAMHKQINEMSHVMFGGITHPPAVELCRRLVALMPSDLECIFLADSGSVAVEVAMKMALQYWQASGRPRCKFLALRQGYHGDTLGAMSVCDPIKSMHSMYSSYLPVNRFVDTLRRRFGETWQIGDDTELSTLFSSCHHTLAAVIMEPIVQGAGGMHFYHPEYLRVARALCDQYGILLIADEIATGFGRTGTWLACNHANIIPDILCLGKALTGGALTLSATLTRRYIAEIISDSAAGCFMHGPTFMGNPLACAAAIASLSLLEDKAWYHRVTAISAQLRRGLSPLVGHPNVLDVRVLGAIGVVEVTKVVNISLLQHWFVEHGVWIRPFRNLIYLIPPYIISSEELTQLIEAISDSLDHPEHFDSSIPI
SIO_010081: HACICURV3402_RS03300
subclass of: SO_0000673
so part of: HACICURV3402_RS03300
location: 6096..7397
location: region:6096-7397:1
so has part: feature:6096-7397:1:exon

WP_157992942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6096-7397:1:exon

HACICURV3402_RS03305
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03305
old locus tag: E4U99_RS03305
old locus tag: ERCICURV3402_666
so part of: sequence
location: 7500..8684
location: region:7500-8684:1
so has part: feature:7500-8684:1:exon
subclass of: SO_0000010

66304940
type: Gene
SIO_000068: ncbigene

position:7500:1
position: 7500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8684:1
position: 8684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7500-8684:1:exon

HACICURV3402_RS03305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03305
old locus tag: E4U99_RS03305
old locus tag: ERCICURV3402_666
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016190140.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside transporter C-terminal domain-containing protein
translation: MSRILHFLASLVVIIVLSMLVSDDRKEIRIRFLSQLLVVEVLLAWFFLHFEIGLEFVKKMSELFDHLLRCAAYGTNFVFGNMSDRGLAFFWLNVLCPIIFISALIGILQHLRVLPAIIRILGTILSKINGMGKLESFNAVSSLLLGQSENFIIYKDILGQISEKRMYTLAATAMSTVSMSIVGAYMTLLQPRYVILALVLNMFSTFIILSLINPYCVDFQDDLKLADPHQKQGFFEMLSEYILAGFKVMVIVTAMLIGFIALIASFNSVFDSVFGISFQEVLGYIFFPLAWVLGVPGYEALQVGSIMATKLVSNEFVAMIDLQKVIEKLSLHSEGILSVFLVSFANFSSIGIISGSIKGLHEEQGNTVSRFGLKLLYGSTLVSLLSAAITGFVL
SIO_010081: HACICURV3402_RS03305
subclass of: SO_0000673
so part of: HACICURV3402_RS03305
location: 7500..8684
location: region:7500-8684:1
so has part: feature:7500-8684:1:exon

WP_157992943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7500-8684:1:exon

HACICURV3402_RS03310
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03310
old locus tag: E4U99_RS03310
old locus tag: ERCICURV3402_667
so part of: sequence
location: complement(9766..10266)
location: region:9766-10266:-1
so has part: feature:9766-10266:-1:exon
subclass of: SO_0000010

66304941
type: Gene
SIO_000068: ncbigene

position:9766:-1
position: 9766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10266:-1
position: 10266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9766-10266:-1:exon

HACICURV3402_RS03310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03310
old locus tag: E4U99_RS03310
old locus tag: ERCICURV3402_667
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011279200.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20 family protein
translation: MAYRSFSLMPTWSNNLLSDRFTQIDNLFSRLTGESPVGDNPAYNLLQKDKDHYEMTVSVPGYTQDELDISVLNNHFTLRGTPKSEDITSTEEKESTTYLHKGIQKKEFSLSFSLEHRIMIYQAKLDNGLLTLQFTYDIPEQEKPKKISIGSNNNNKDGHVVEHNKT
SIO_010081: HACICURV3402_RS03310
subclass of: SO_0000673
so part of: HACICURV3402_RS03310
location: complement(9766..10266)
location: region:9766-10266:-1
so has part: feature:9766-10266:-1:exon

WP_157992944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9766-10266:-1:exon

HACICURV3402_RS03315
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03315
old locus tag: E4U99_RS03315
old locus tag: ERCICURV3402_668
so part of: sequence
location: 12271..12768
location: region:12271-12768:1
so has part: feature:12271-12768:1:exon
subclass of: SO_0000010

66304942
type: Gene
SIO_000068: ncbigene

position:12271:1
position: 12271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12768:1
position: 12768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12271-12768:1:exon

HACICURV3402_RS03315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03315
old locus tag: E4U99_RS03315
old locus tag: ERCICURV3402_668
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888259.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D family protein
translation: MITSLPLYAVCITDQDIEVGFSPGGTAQHIVLSAITGARKSIDIAAYSFTSKPIALALIEAKNRGVNIRVVADRKSNSSKYTAVTYLINKNVSVKLNEKYAIMHNKFMIIDGISVETGSFNYTQNAVSHNAENVIYLHNRLDIANKYSKEFNRLWLESISVKPMY
SIO_010081: HACICURV3402_RS03315
subclass of: SO_0000673
so part of: HACICURV3402_RS03315
location: 12271..12768
location: region:12271-12768:1
so has part: feature:12271-12768:1:exon

WP_232037534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12271-12768:1:exon

HACICURV3402_RS03320
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03320
old locus tag: E4U99_RS03320
old locus tag: ERCICURV3402_669
so part of: sequence
location: 13886..14458
location: region:13886-14458:1
so has part: feature:13886-14458:1:exon
subclass of: SO_0000010

66304943
type: Gene
SIO_000068: ncbigene

position:13886:1
position: 13886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14458:1
position: 14458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13886-14458:1:exon

HACICURV3402_RS03320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03320
old locus tag: E4U99_RS03320
old locus tag: ERCICURV3402_669
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000147566.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MIGQRIGYTRISTIHQNPQRQLDSVKVDRIFTDVASGKEIKRPQLEALINFVRSGDTVLIHSMDRLARNLNDLRRIVQMLTERGVRVEFIQENLSFTGKDSPLSNLMLAVIGAFAEFERSLLKERQREGIELAKQRGVYRGRKRTLSDRQVTELCQRVASGEKKVKVARDFSISRETLYQYIRREGSRVV
SIO_010081: HACICURV3402_RS03320
subclass of: SO_0000673
so part of: HACICURV3402_RS03320
location: 13886..14458
location: region:13886-14458:1
so has part: feature:13886-14458:1:exon

WP_157992946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13886-14458:1:exon

HACICURV3402_RS03325
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03325
old locus tag: E4U99_RS03325
old locus tag: ERCICURV3402_670
so part of: sequence
location: 16732..17787
location: region:16732-17787:1
so has part: feature:16732-17787:1:exon
subclass of: SO_0000010

66304944
type: Gene
SIO_000068: ncbigene

position:16732:1
position: 16732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17787:1
position: 17787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16732-17787:1:exon

HACICURV3402_RS03325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03325
old locus tag: E4U99_RS03325
old locus tag: ERCICURV3402_670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004164544.1
GO process: GO:0017013 - protein flavinylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD:protein FMN transferase
translation: MNNAYRYFVFYILIFMQSSCSYPHPLLNYKTTILTGHSMGTIWRVNVVDIQAERKHALHTSIQKILDYDDAQLSTWKTDSVLSRFNQYKGYHSQPVSTEIADIITQALRVGNQMNGAMDITIGSLVNLWGFGPRGSLKFTPTQRQIDCARSLHGLSYLTVTNSSTQSYLRKDMPGIYIDLSSVGEGYAVDHLVHLMQKEGIDNYLVSVGGAIVTCGHNAQGKPWKIAIQKPIDQENAVQDIVELKGCGISTSGTYRNYYELNGKPISHLINPFTGQPAQNELVSATVIAPTALEADCWDSGLMILGLKKSQELAIKHKKAVYLVYKKNDQLISWISPKFFPFIQSPSLGNS
SIO_010081: HACICURV3402_RS03325
subclass of: SO_0000673
so part of: HACICURV3402_RS03325
location: 16732..17787
location: region:16732-17787:1
so has part: feature:16732-17787:1:exon

WP_157992947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16732-17787:1:exon

HACICURV3402_RS03330
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
gene: gpmA
locus tag: HACICURV3402_RS03330
old locus tag: E4U99_RS03330
old locus tag: ERCICURV3402_671
so part of: sequence
location: 18282..19022
location: region:18282-19022:1
so has part: feature:18282-19022:1:exon
subclass of: SO_0000010

66304945
type: Gene
SIO_000068: ncbigene

position:18282:1
position: 18282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19022:1
position: 19022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18282-19022:1:exon

HACICURV3402_RS03330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
gene: gpmA
locus tag: HACICURV3402_RS03330
old locus tag: E4U99_RS03330
old locus tag: ERCICURV3402_671
EC number: 5.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1
GO function: GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
translation: MNILKLVLIRHGESQWNKQNLFTGWHDIDLTEQGRSQAVCAGQLLKKEGFVFDFAYTSFLKRAIHTLWYILDEMDQAWLPVEKSWRLNERHYGALQGMDKTASSKKYGIEQVQQWRRSLTVVPPHLNHFDKRFPGHDPRYGNLNKEQLPTAESLAMTIDRVLPIWKKGIFPQIKNHKKIIIVAHGNSLRALITYLDNMTEQDILKLDIPTGVPLIYEFNENFHPISRYWLDSGNNKTSKSESILNP
SIO_010081: HACICURV3402_RS03330
subclass of: SO_0000673
so part of: HACICURV3402_RS03330
location: 18282..19022
location: region:18282-19022:1
so has part: feature:18282-19022:1:exon

WP_157992948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18282-19022:1:exon

HACICURV3402_RS03335
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03335
old locus tag: E4U99_RS03335
old locus tag: ERCICURV3402_672
so part of: sequence
location: complement(21605..22177)
location: region:21605-22177:-1
so has part: feature:21605-22177:-1:exon
subclass of: SO_0000010

66304946
type: Gene
SIO_000068: ncbigene

position:21605:-1
position: 21605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22177:-1
position: 22177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21605-22177:-1:exon

HACICURV3402_RS03335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03335
old locus tag: E4U99_RS03335
old locus tag: ERCICURV3402_672
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000147566.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MIGQRIGYTRISTIHQNPQRQLDSVKVDRIFTDVASGKEIKRPQLEALINFVRSGDTVLIHSMDRLARNLNDLRRIVQMLTERGVRVEFIQENLSFTGKDSPLSNLMLAVIGAFAEFERSLLKERQREGIELAKQRGVYRGRKRTLSDRQVTELCQRVASGEKKVKVARDFSISRETLYQYIRREGSRVV
SIO_010081: HACICURV3402_RS03335
subclass of: SO_0000673
so part of: HACICURV3402_RS03335
location: complement(21605..22177)
location: region:21605-22177:-1
so has part: feature:21605-22177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21605-22177:-1:exon

HACICURV3402_RS03340
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03340
old locus tag: E4U99_RS03340
old locus tag: ERCICURV3402_673
so part of: sequence
location: complement(23295..23792)
location: region:23295-23792:-1
so has part: feature:23295-23792:-1:exon
subclass of: SO_0000010

66304947
type: Gene
SIO_000068: ncbigene

position:23295:-1
position: 23295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23792:-1
position: 23792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23295-23792:-1:exon

HACICURV3402_RS03340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03340
old locus tag: E4U99_RS03340
old locus tag: ERCICURV3402_673
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888259.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D family protein
translation: MITSLPLYAVCITDQDIEVGFSPGGTAQHIVLSAITGARKSIDIAAYSFTSKPIALALIEAKNRGVNIRVVADRKSNSSKYTAVTYLINKNVSVKLNEKYAIMHNKFMIIDGISVETGSFNYTQNAVSHNAENVIYLHNRLDIANKYSKEFNRLWLESISVKPMY
SIO_010081: HACICURV3402_RS03340
subclass of: SO_0000673
so part of: HACICURV3402_RS03340
location: complement(23295..23792)
location: region:23295-23792:-1
so has part: feature:23295-23792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23295-23792:-1:exon

HACICURV3402_RS03345
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03345
old locus tag: E4U99_RS03345
old locus tag: ERCICURV3402_674
so part of: sequence
location: 25797..26297
location: region:25797-26297:1
so has part: feature:25797-26297:1:exon
subclass of: SO_0000010

66304948
type: Gene
SIO_000068: ncbigene

position:25797:1
position: 25797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26297:1
position: 26297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25797-26297:1:exon

HACICURV3402_RS03345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03345
old locus tag: E4U99_RS03345
old locus tag: ERCICURV3402_674
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011279200.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20 family protein
translation: MAYRSFSLMPTWSNNLLSDRFTQIDNLFSRLTGESPVGDNPAYNLLQKDKDHYEMTVSVPGYTQDELDISVLNNHFTLRGTPKSEDITSTEEKESTTYLHKGIQKKEFSLSFSLEHRIMIYQAKLDNGLLTLQFTYDIPEQEKPKKISIGSNNNNKDGHVVEHNKT
SIO_010081: HACICURV3402_RS03345
subclass of: SO_0000673
so part of: HACICURV3402_RS03345
location: 25797..26297
location: region:25797-26297:1
so has part: feature:25797-26297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25797-26297:1:exon

HACICURV3402_RS03350
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03350
old locus tag: E4U99_RS03350
old locus tag: ERCICURV3402_675
so part of: sequence
location: complement(27379..28563)
location: region:27379-28563:-1
so has part: feature:27379-28563:-1:exon
subclass of: SO_0000010

66304949
type: Gene
SIO_000068: ncbigene

position:27379:-1
position: 27379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28563:-1
position: 28563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27379-28563:-1:exon

HACICURV3402_RS03350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03350
old locus tag: E4U99_RS03350
old locus tag: ERCICURV3402_675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016190140.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside transporter C-terminal domain-containing protein
translation: MSRILHFLASLVVIIVLSMLVSDDRKEIRIRFLSQLLVVEVLLAWFFLHFEIGLEFVKKMSELFDHLLRCAAYGTNFVFGNMSDRGLAFFWLNVLCPIIFISALIGILQHLRVLPAIIRILGTILSKINGMGKLESFNAVSSLLLGQSENFIIYKDILGQISEKRMYTLAATAMSTVSMSIVGAYMTLLQPRYVILALVLNMFSTFIILSLINPYCVDFQDDLKLADPHQKQGFFEMLSEYILAGFKVMVIVTAMLIGFIALIASFNSVFDSVFGISFQEVLGYIFFPLAWVLGVPGYEALQVGSIMATKLVSNEFVAMIDLQKVIEKLSLHSEGILSVFLVSFANFSSIGIISGSIKGLHEEQGNTVSRFGLKLLYGSTLVSLLSAAITGFVL
SIO_010081: HACICURV3402_RS03350
subclass of: SO_0000673
so part of: HACICURV3402_RS03350
location: complement(27379..28563)
location: region:27379-28563:-1
so has part: feature:27379-28563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27379-28563:-1:exon

HACICURV3402_RS03355
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
gene: bioA
locus tag: HACICURV3402_RS03355
old locus tag: E4U99_RS03355
old locus tag: ERCICURV3402_676
so part of: sequence
location: complement(28666..29967)
location: region:28666-29967:-1
so has part: feature:28666-29967:-1:exon
subclass of: SO_0000010

66304950
type: Gene
SIO_000068: ncbigene

position:28666:-1
position: 28666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29967:-1
position: 29967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28666-29967:-1:exon

HACICURV3402_RS03355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
gene: bioA
locus tag: HACICURV3402_RS03355
old locus tag: E4U99_RS03355
old locus tag: ERCICURV3402_676
EC number: 2.6.1.62
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410763.1
GO function: GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylmethionine--8-amino-7-oxononanoate transaminase
translation: MQADDLAFDKRHVWHPYTSMTQPLPTYPIVSASGCELILRDGRRLVDGMSSWWAAIHGYNHPTINQAMHKQINEMSHVMFGGITHPPAVELCRRLVALMPSDLECIFLADSGSVAVEVAMKMALQYWQASGRPRCKFLALRQGYHGDTLGAMSVCDPIKSMHSMYSSYLPVNRFVDTLRRRFGETWQIGDDTELSTLFSSCHHTLAAVIMEPIVQGAGGMHFYHPEYLRVARALCDQYGILLIADEIATGFGRTGTWLACNHANIIPDILCLGKALTGGALTLSATLTRRYIAEIISDSAAGCFMHGPTFMGNPLACAAAIASLSLLEDKAWYHRVTAISAQLRRGLSPLVGHPNVLDVRVLGAIGVVEVTKVVNISLLQHWFVEHGVWIRPFRNLIYLIPPYIISSEELTQLIEAISDSLDHPEHFDSSIPI
SIO_010081: HACICURV3402_RS03355
subclass of: SO_0000673
so part of: HACICURV3402_RS03355
location: complement(28666..29967)
location: region:28666-29967:-1
so has part: feature:28666-29967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28666-29967:-1:exon

HACICURV3402_RS03360
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
gene: bioB
locus tag: HACICURV3402_RS03360
old locus tag: E4U99_RS03360
old locus tag: ERCICURV3402_677
so part of: sequence
location: 30071..31108
location: region:30071-31108:1
so has part: feature:30071-31108:1:exon
subclass of: SO_0000010

66304951
type: Gene
SIO_000068: ncbigene

position:30071:1
position: 30071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31108:1
position: 31108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30071-31108:1:exon

HACICURV3402_RS03360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
gene: bioB
locus tag: HACICURV3402_RS03360
old locus tag: E4U99_RS03360
old locus tag: ERCICURV3402_677
EC number: 2.8.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013183852.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin synthase BioB
translation: MSIPQRWTTEQVRSLFDQPFFDLLFKAQQIHRQHFISGEIQVSTLLSIKTGACPEDCKYCPQSARYNSGIQREDLIEVQKVLDAAEKARKAGSTRFCMGAAWKNPRDRDMPLLEEMVKGVKAMGLETCMTLGMINNDQAQQLAKAGLDFYNHNLDTSPEFYNEIITTRSYQDRLDTLSTIRQAGIKICSGGIVGMGENINDRAGLLVQLANLPIQPESVPINMLVKSPGTPLSDASDVDPFDFIRTIAVARIMMPNSYVRLSAGREQMNEQTQALCFMAGTNSVFYGCKLLTAPNPDEDHDLRLFKKLGLTIQHKKISEGNQEQEKNLTESLLSLDTDKYYNAAH
SIO_010081: HACICURV3402_RS03360
subclass of: SO_0000673
so part of: HACICURV3402_RS03360
location: 30071..31108
location: region:30071-31108:1
so has part: feature:30071-31108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30071-31108:1:exon

HACICURV3402_RS03365
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03365
old locus tag: E4U99_RS03365
so part of: sequence
location: 33282..33440
location: region:33282-33440:1
so has part: feature:33282-33440:1:exon
subclass of: SO_0000010

66304952
type: Gene
SIO_000068: ncbigene

position:33282:1
position: 33282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33440:1
position: 33440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33282-33440:1:exon

HACICURV3402_RS03365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03365
old locus tag: E4U99_RS03365
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVVRCKNPSILRQLGGRTRDRGVVYRLMPVKDYNECILKKQHLSAIRFGQGE
SIO_010081: HACICURV3402_RS03365
subclass of: SO_0000673
so part of: HACICURV3402_RS03365
location: 33282..33440
location: region:33282-33440:1
so has part: feature:33282-33440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33282-33440:1:exon

HACICURV3402_RS03370
type: Gene
subclass of: SO_0000704
RO_0002162: 1922217
locus tag: HACICURV3402_RS03370
old locus tag: E4U99_RS03370
old locus tag: ERCICURV3402_678
so part of: sequence
location: 33433..34488
location: region:33433-34488:1
so has part: feature:33433-34488:1:exon
subclass of: SO_0000010

66304953
type: Gene
SIO_000068: ncbigene

position:33433:1
position: 33433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34488:1
position: 34488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33433-34488:1:exon

HACICURV3402_RS03370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1922217
locus tag: HACICURV3402_RS03370
old locus tag: E4U99_RS03370
old locus tag: ERCICURV3402_678
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708261.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Replication protein
translation: MNNNTVMLQESDQVVYRQTRRGEANCQRKGQVKTHRNHQPQFTGKIPRGMAAKVMACIKNHDWRQNSDLIALRKNGYTPYSRIFDRSYQPKPLRITVRSESREALSALSLALAANCDYSPYSQYMFEVILPIAEIAQRMGVLHVYNNGRKAYDVLLHALRVLEQLDYVIVHRGRESDSGQNKPMRVFLTENFFTSRGMNVESVRQWLHKYRQWAISAGISVSLRSKYERHQLKMARLGIDIDRHHSLKNRLKSIKRWVVSPELFNEKESIIADLNTYLIAHKKQRILSRNLSEVRYQMAWWAWSASDACTPVIRLNLENAIKTEFPHLLNHSTSTEQYYRLLLERAGIPLP
SIO_010081: HACICURV3402_RS03370
subclass of: SO_0000673
so part of: HACICURV3402_RS03370
location: 33433..34488
location: region:33433-34488:1
so has part: feature:33433-34488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33433-34488:1:exon