Sulfitobacter alexandrii strain AM1-D1 plasmid unnamed5, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Sulfitobacter.
Complete genome sequence of Sulfitobacter sp. AM1-D1, a toxic bacteria associated with marine dinoflagellate Alexandrium minutum in East China Sea
Submitted (16-NOV-2016) Marine Natural Products, East China Sea Fisheries Research Institute, 300, Jungong Rd., Shanghai 200090, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP018081.1.\nBacteria and source DNA available from cuture of a marine\ndinoflagellate Alexandrium minutum.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2016\nAssembly Method :: SOAPdenovo v. 2.04\nAssembly Name :: Sulfitobacter sp. AM1-D1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 280.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 02:44:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,592\nCDSs (total) :: 4,538\nGenes (coding) :: 4,464\nCDSs (with protein) :: 4,464\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 3\nPseudo Genes (total) :: 74\nCDSs (without protein) :: 74\nPseudo Genes (ambiguous residues) :: 0 of 74\nPseudo Genes (frameshifted) :: 52 of 74\nPseudo Genes (incomplete) :: 27 of 74\nPseudo Genes (internal stop) :: 2 of 74\nPseudo Genes (multiple problems) :: 6 of 74\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
cell culture of Alexandrium minutum 1089
COORDINATES: similar to AA sequence:RefSeq:WP_009820070.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009827042.1
COORDINATES: similar to AA sequence:RefSeq:WP_010138187.1
COORDINATES: similar to AA sequence:RefSeq:WP_012187059.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_007814098.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016876.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011475064.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009820032.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
ribosome-associated ATPase/putative transporter RbbA
COORDINATES: similar to AA sequence:RefSeq:WP_006174421.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009504349.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504351.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009504353.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504355.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004674813.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018096551.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820039.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009820040.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820041.1
glutathione S-transferase family protein
COORDINATES: protein motif:HMM:NF012273.2
COORDINATES: similar to AA sequence:RefSeq:WP_008282861.1
COORDINATES: similar to AA sequence:RefSeq:WP_006903525.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504343.1
class III extradiol ring-cleavage dioxygenase
COORDINATES: protein motif:HMM:NF024953.2
COORDINATES: similar to AA sequence:RefSeq:WP_009820027.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008282858.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008282857.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820024.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009820023.1
COORDINATES: similar to AA sequence:RefSeq:WP_008167683.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009803608.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820014.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803606.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820012.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_009803604.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504326.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504325.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009504324.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803600.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009504322.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011046470.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009825319.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803596.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009803595.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803594.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009820001.1
COORDINATES: similar to AA sequence:RefSeq:WP_017148819.1
COORDINATES: similar to AA sequence:RefSeq:WP_009819999.1
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009819998.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803589.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803588.1
COORDINATES: similar to AA sequence:RefSeq:WP_009819995.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803586.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504563.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803584.1
phenylacetate--CoA ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009504565.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803568.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504567.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803566.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803565.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504570.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504571.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504572.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803561.1
C4-dicarboxylate TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009803560.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504575.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504576.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803557.1
COORDINATES: protein motif:HMM:TIGR02123.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803555.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009803554.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803553.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504583.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504584.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803550.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009803549.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803548.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009803547.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504589.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803545.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803544.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803543.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504593.1
Zn-ribbon domain-containing OB-fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_009803541.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009803540.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504597.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803538.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803537.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504600.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803534.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504603.1
IclR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007813144.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273520.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein DctP
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: similar to AA sequence:RefSeq:WP_009504606.1
COORDINATES: similar to AA sequence:RefSeq:WP_005796378.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504608.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_009504610.1
COORDINATES: similar to AA sequence:RefSeq:WP_013391017.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504611.1
COORDINATES: protein motif:HMM:NF014564.2
COORDINATES: similar to AA sequence:RefSeq:WP_006223316.1
COORDINATES: similar to AA sequence:RefSeq:WP_012248579.1
COORDINATES: protein motif:HMM:NF024850.2
GO:0008410 - CoA-transferase activity [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009504370.1
COORDINATES: similar to AA sequence:RefSeq:WP_011501036.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: similar to AA sequence:RefSeq:WP_012363881.1
COORDINATES: similar to AA sequence:RefSeq:WP_009506052.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803530.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803529.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803528.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803527.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_009803526.1
COORDINATES: similar to AA sequence:RefSeq:WP_009506058.1
COORDINATES: similar to AA sequence:RefSeq:WP_009506059.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803523.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803522.1
COORDINATES: similar to AA sequence:RefSeq:WP_009506062.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803520.1
MaoC family dehydratase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009803519.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803518.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504375.1
COORDINATES: similar to AA sequence:RefSeq:WP_009819988.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504378.1
biotin carboxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009803514.1
carboxyl transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009504381.1
COORDINATES: similar to AA sequence:RefSeq:WP_009819984.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803511.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803510.1
COORDINATES: similar to AA sequence:RefSeq:WP_017562879.1
NADPH-dependent 2,4-dienoyl-CoA reductase
COORDINATES: similar to AA sequence:RefSeq:WP_009803508.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803507.1
COORDINATES: similar to AA sequence:RefSeq:WP_004115066.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803505.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803504.1
GO:0008725 - DNA-3-methyladenine glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007792467.1
COORDINATES: similar to AA sequence:RefSeq:WP_003550441.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009803503.1
COORDINATES: similar to AA sequence:RefSeq:WP_009503104.1
COORDINATES: similar to AA sequence:RefSeq:WP_009503105.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803500.1
COORDINATES: similar to AA sequence:RefSeq:WP_003815607.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803498.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803497.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803496.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803495.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803494.1
COORDINATES: similar to AA sequence:RefSeq:WP_009503111.1
COORDINATES: similar to AA sequence:RefSeq:WP_007574730.1
COORDINATES: similar to AA sequence:RefSeq:WP_009503113.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803490.1
COORDINATES: similar to AA sequence:RefSeq:WP_009503115.1
COORDINATES: similar to AA sequence:RefSeq:WP_009503116.1
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020648026.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803486.1
transferase hexapeptide repeat family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016848399.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803484.1
COORDINATES: similar to AA sequence:RefSeq:WP_009819967.1
COORDINATES: similar to AA sequence:RefSeq:WP_009819966.1
COORDINATES: similar to AA sequence:RefSeq:WP_009819965.1
crotonase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009503123.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803477.1
COORDINATES: similar to AA sequence:RefSeq:WP_009819962.1
GO:0015225 - biotin transmembrane transporter activity [Evidence IEA]
GO:0015878 - biotin transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009503126.1
COORDINATES: similar to AA sequence:RefSeq:WP_012187318.1
COORDINATES: similar to AA sequence:RefSeq:WP_012187172.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120686.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009803471.1
COORDINATES: similar to AA sequence:RefSeq:WP_012187321.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803469.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009803468.1
COORDINATES: similar to AA sequence:RefSeq:WP_008327373.1
VirB3 family type IV secretion system protein
COORDINATES: similar to AA sequence:RefSeq:WP_005859622.1
COORDINATES: similar to AA sequence:RefSeq:WP_011536596.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120678.1
COORDINATES: similar to AA sequence:RefSeq:WP_014880583.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803689.1
COORDINATES: similar to AA sequence:RefSeq:WP_011536592.1
TrbG/VirB9 family P-type conjugative transfer protein
COORDINATES: similar to AA sequence:RefSeq:WP_008327387.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803686.1
COORDINATES: similar to AA sequence:RefSeq:WP_008327391.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803684.1
COORDINATES: similar to AA sequence:RefSeq:WP_009808070.1
COORDINATES: similar to AA sequence:RefSeq:WP_011331105.1
COORDINATES: similar to AA sequence:RefSeq:WP_008759464.1
COORDINATES: similar to AA sequence:RefSeq:WP_009807937.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009807938.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007120663.1
COORDINATES: similar to AA sequence:RefSeq:WP_011536569.1
COORDINATES: similar to AA sequence:RefSeq:WP_009826999.1
COORDINATES: similar to AA sequence:RefSeq:WP_011453064.1
COORDINATES: similar to AA sequence:RefSeq:WP_011453063.1
COORDINATES: similar to AA sequence:RefSeq:WP_007803577.1
COORDINATES: similar to AA sequence:RefSeq:WP_017172396.1
phosphoadenosine phosphosulfate reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007803580.1
COORDINATES: similar to AA sequence:RefSeq:WP_009807948.1
COORDINATES: similar to AA sequence:RefSeq:WP_012187348.1
COORDINATES: similar to AA sequence:RefSeq:WP_008327427.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803667.1
bifunctional class I SAM-dependent methyltransferase/DEAD/DEAH box helicase
COORDINATES: similar to AA sequence:RefSeq:WP_009803666.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820261.1
COORDINATES: similar to AA sequence:RefSeq:WP_009807539.1
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_010398690.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803663.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803662.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018066614.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803653.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009505446.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020043699.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_009827075.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009803649.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009803648.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009803647.1
COORDINATES: similar to AA sequence:RefSeq:WP_009803646.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_020042763.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020042765.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009803644.1
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020042767.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014773550.1
COORDINATES: similar to AA sequence:RefSeq:WP_015940245.1
COORDINATES: similar to AA sequence:RefSeq:WP_008529736.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_019013266.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF012517.2
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_003922564.1
COORDINATES: similar to AA sequence:RefSeq:WP_013832817.1
GO:0008701 - 4-hydroxy-2-oxovalerate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019966190.1
GO:0008774 - acetaldehyde dehydrogenase (acetylating) activity [Evidence IEA]
acetaldehyde dehydrogenase (acetylating)
COORDINATES: similar to AA sequence:RefSeq:WP_007182704.1
COORDINATES: similar to AA sequence:RefSeq:WP_015435487.1
COORDINATES: similar to AA sequence:RefSeq:WP_005623833.1
COORDINATES: similar to AA sequence:RefSeq:WP_017138675.1
4-hydroxyphenylacetate 3-hydroxylase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF009910.0
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013757.2
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF018513.2
COORDINATES: similar to AA sequence:RefSeq:WP_013435815.1
COORDINATES: similar to AA sequence:RefSeq:WP_007105069.1
GO:0016862 - intramolecular oxidoreductase activity, interconverting keto- and enol-groups [Evidence IEA]
2-hydroxymuconate tautomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011909204.1
COORDINATES: similar to AA sequence:RefSeq:WP_009469622.1
GO:0015074 - DNA integration [Evidence IEA]
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_011578678.1
COORDINATES: similar to AA sequence:RefSeq:WP_006316174.1
COORDINATES: similar to AA sequence:RefSeq:WP_009574101.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804208.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120602.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120603.1
COORDINATES: similar to AA sequence:RefSeq:WP_009574105.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120605.1
COORDINATES: similar to AA sequence:RefSeq:WP_008335580.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120607.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120608.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804201.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804200.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804199.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120612.1
COORDINATES: similar to AA sequence:RefSeq:WP_009179414.1
COORDINATES: similar to AA sequence:RefSeq:WP_009179475.1
COORDINATES: similar to AA sequence:RefSeq:WP_009819650.1
COORDINATES: similar to AA sequence:RefSeq:WP_007121048.1
GO:0043684 - type IV secretion system complex [Evidence IEA]
GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: similar to AA sequence:RefSeq:WP_009574084.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804189.1
COORDINATES: similar to AA sequence:RefSeq:WP_009807881.1
COORDINATES: similar to AA sequence:RefSeq:WP_009179468.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827309.1
COORDINATES: similar to AA sequence:RefSeq:WP_008335622.1
COORDINATES: protein motif:HMM:NF012307.2
COORDINATES: protein motif:HMM:NF018259.2
COORDINATES: similar to AA sequence:RefSeq:WP_009573575.1
COORDINATES: protein motif:HMM:NF012870.2
Mu transposase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024880.2
GO:0008168 - methyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003523553.1
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009819737.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820065.1
COORDINATES: similar to AA sequence:RefSeq:WP_008335646.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009574266.1
COORDINATES: similar to AA sequence:RefSeq:WP_015497723.1
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015497722.1
COORDINATES: similar to AA sequence:RefSeq:WP_009179410.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804234.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827040.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827039.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827038.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827037.1
COORDINATES: similar to AA sequence:RefSeq:WP_009179445.1
COORDINATES: similar to AA sequence:RefSeq:WP_008335678.1
COORDINATES: similar to AA sequence:RefSeq:WP_009807841.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804229.1
COORDINATES: similar to AA sequence:RefSeq:WP_008335689.1
COORDINATES: similar to AA sequence:RefSeq:WP_009574128.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612067.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018632728.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120592.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120593.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804224.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481484.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_009827030.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_028710025.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747348.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827026.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827025.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804216.1
COORDINATES: similar to AA sequence:RefSeq:WP_011336943.1
COORDINATES: similar to AA sequence:RefSeq:WP_007120599.1
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009574206.1
COORDINATES: similar to AA sequence:RefSeq:WP_012187387.1