Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence.
type: Entry
definition: Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence.
sequence version: NZ_CP045310.1
sequence date: 2023-04-24
sequence: sequence
division: CON
label: NZ_CP045310.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN13037568
keyword: RefSeq
source: Micromonospora terminaliae
organism: Micromonospora terminaliae
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Micromonosporales; Micromonosporaceae; Micromonospora.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP045310.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 90.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/24/2023 03:59:41\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,347\nCDSs (total) :: 6,278\nGenes (coding) :: 6,196\nCDSs (with protein) :: 6,196\nGenes (RNA) :: 69\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 57\nncRNAs :: 3\nPseudo Genes (total) :: 82\nCDSs (without protein) :: 82\nPseudo Genes (ambiguous residues) :: 0 of 82\nPseudo Genes (frameshifted) :: 18 of 82\nPseudo Genes (incomplete) :: 67 of 82\nPseudo Genes (internal stop) :: 4 of 82\nPseudo Genes (multiple problems) :: 7 of 82\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 24912
topology: circular
so has quality: SO_0000988
location: 1..24912
location: region:1-24912:1
RO_0002162: 1914461

NZ_CP045310
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN13037568
type: BioSample
SIO_000068: biosample

1
title: Genome Sequence of Micromonospora terminaliae DSM 101760
author: Guo, L.
journal: Unpublished

2
title: Direct Submission
author: Guo, L.
journal: Submitted (16-OCT-2019) China National Rice Research Insititute, China National Rice Research Institute, State Key Lab for Rice Biology, Hangzhou, Zhejiang 310006, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:24912:1
position: 24912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24912:1:source
so part of: sequence
organism: Micromonospora terminaliae
mol type: genomic DNA
strain: DSM 101760
culture collection: DSM:101760
type material: type strain of Micromonospora terminaliae
plasmid: pLB1

1914461
type: Taxonomy
SIO_000068: taxonomy

GCE86_RS31350
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31350
old locus tag: GCE86_31390
pseudo: true
so part of: sequence
location: complement(join(24616..24912,1..>12))
location: region:1-24912:-1
so has part: feature:1-12:-1:exon
so has part: feature:24616-24912:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24912:-1
position: 24912
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-12:-1:exon

position:12:-1
position: 12
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24616-24912:-1:exon

position:24616:-1
position: 24616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GCE86_RS31350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31350
old locus tag: GCE86_31390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018786291.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: putative protein N(5)-glutamine methyltransferase
SIO_010081: GCE86_RS31350
subclass of: SO_0000673
so part of: GCE86_RS31350
location: complement(join(24616..24912,1..>12))
location: region:1-24912:-1
so has part: feature:1-12:-1:exon
so has part: feature:24616-24912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-12:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24616-24912:-1:exon

GCE86_RS31920
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31920
old locus tag: GCE86_31395
pseudo: true
so part of: sequence
location: <1..477
location: region:1-477:1
so has part: feature:1-477:1:exon
subclass of: SO_0000010

position:477:1
position: 477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-477:1:exon

GCE86_RS31920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31920
old locus tag: GCE86_31395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018786294.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF5753 domain-containing protein
SIO_010081: GCE86_RS31920
subclass of: SO_0000673
so part of: GCE86_RS31920
location: <1..477
location: region:1-477:1
so has part: feature:1-477:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-477:1:exon

GCE86_RS31360
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31360
old locus tag: GCE86_31400
so part of: sequence
location: 483..683
location: region:483-683:1
so has part: feature:483-683:1:exon
subclass of: SO_0000010

position:483:1
position: 483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683:1
position: 683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483-683:1:exon

GCE86_RS31360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31360
old locus tag: GCE86_31400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013732063.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF397 domain-containing protein
translation: MNGTNSHRRPVTGWRKSSHSGDEGACVEMAPLPEAVAVRDSKDPAGPVLVFRPAAWAAFTDAPPRP
SIO_010081: GCE86_RS31360
subclass of: SO_0000673
so part of: GCE86_RS31360
location: 483..683
location: region:483-683:1
so has part: feature:483-683:1:exon

WP_154225126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483-683:1:exon

GCE86_RS31365
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31365
old locus tag: GCE86_31405
so part of: sequence
location: complement(764..1816)
location: region:764-1816:-1
so has part: feature:764-1816:-1:exon
subclass of: SO_0000010

position:764:-1
position: 764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816:-1
position: 1816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764-1816:-1:exon

GCE86_RS31365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31365
old locus tag: GCE86_31405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018786292.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ROK family protein
translation: MGSAGVPVVVGLDNGGTSNNATVLTVDGRFLVDGLVEIPSEVQAGPEAAIEALARALDGVLALTGVPRELVRAVGLDTPGPASATGVISSRGSTNFSQPAWRGYDVRSALEHRLGLPVVYANDGNAAALYAHHTHFGADAMARSSVAAIVGTGLGGGVVESGRVVGGAAGMAGEFGHVHIPLDGLLGPGQPVPVCACGFAGDVESVASLTAIANNLLPYWLGRFPGHPLAAEEPARAAKLVRGYGERGDPLARELFTQQAMALGRLFTIAANFTDPHAYFVGGGVVEAAPEFRDWFLATVREHTVLRAEQRAVATFALVPDRDMAGARGVAIAALEAVRGGAAAGPLVAG
SIO_010081: GCE86_RS31365
subclass of: SO_0000673
so part of: GCE86_RS31365
location: complement(764..1816)
location: region:764-1816:-1
so has part: feature:764-1816:-1:exon

WP_154225125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:764-1816:-1:exon

GCE86_RS31370
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31370
old locus tag: GCE86_31410
so part of: sequence
location: complement(1914..2705)
location: region:1914-2705:-1
so has part: feature:1914-2705:-1:exon
subclass of: SO_0000010

position:1914:-1
position: 1914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705:-1
position: 2705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1914-2705:-1:exon

GCE86_RS31370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31370
old locus tag: GCE86_31410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018786291.1
GO function: GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative protein N(5)-glutamine methyltransferase
translation: MPATLFSPDRPALVRRLRAAGCVFAEDEAELLIAAADSAEALTDLVDRRVAGLPLEHLLGWAEFCGLRVAVDPGVFVPRGRTALLVTAAAAVAGPSPAVLDLCCGSGAAALVLHGRLAPRWLAAADVDPAAVACARRNLTPLGVPVYQGDLFAPLPARWRGRLDLVVANAPYVPSDAVAMLPPEARLHEAPVALDGGADGLAVLRRVAAGAAEWLAPGGHLAVEVSAGQATALCAILTDAGLDPSVVHDDDLEATAVTARRPG
SIO_010081: GCE86_RS31370
subclass of: SO_0000673
so part of: GCE86_RS31370
location: complement(1914..2705)
location: region:1914-2705:-1
so has part: feature:1914-2705:-1:exon

WP_154225124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1914-2705:-1:exon

GCE86_RS31375
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31375
old locus tag: GCE86_31415
so part of: sequence
location: complement(2877..3989)
location: region:2877-3989:-1
so has part: feature:2877-3989:-1:exon
subclass of: SO_0000010

position:2877:-1
position: 2877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3989:-1
position: 3989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2877-3989:-1:exon

GCE86_RS31375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31375
old locus tag: GCE86_31415
EC number: 4.4.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018800965.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0019346 - transsulfuration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cystathionine gamma-lyase
translation: MTDEWGDGTRSVHAGLPAPEPGQPFLPGPVFAAPYHLDPWRGPEATPNGYGRPDNPTRRLLEAAVGELEGGDCRVFASGQAAITGLLLALLRPGDTVLLPADGYFPVRAFATATLEGIGVRVGFVPTAGPYPSFEGVRLVLLETPANPGLDVADVPALAVAAHGAGALVAVDNTTATPLGQRPLELGADVVVASGTKALTGHSDLLLGYVATRSAELLDAVTAWRTTTGGVPGPFDCWLAHRSLATVDLRLGRQTANAEALARLLAGRDDVTGLRWPGLATDPAYAVASVQMRRMPGVLSFDLGDADRVARFLDASRLVSAATSFGGLHTTADRRAQWGDDTAPGFVRLSCGIEDAADLVADVTAALDAA
SIO_010081: GCE86_RS31375
subclass of: SO_0000673
so part of: GCE86_RS31375
location: complement(2877..3989)
location: region:2877-3989:-1
so has part: feature:2877-3989:-1:exon

WP_154225123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2877-3989:-1:exon

GCE86_RS31380
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31380
old locus tag: GCE86_31420
so part of: sequence
location: complement(3997..5004)
location: region:3997-5004:-1
so has part: feature:3997-5004:-1:exon
subclass of: SO_0000010

position:3997:-1
position: 3997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5004:-1
position: 5004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3997-5004:-1:exon

GCE86_RS31380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31380
old locus tag: GCE86_31420
EC number: 1.1.1.94
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013284538.1
GO component: GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO function: GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO process: GO:0046167 - glycerol-3-phosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
translation: MSGHVAVLGAGSWGTAFAKILADAGREVTILARRASVAEAIRTGRHNPDYLPDVRLPDRVTATGDAEEAIAGAEVVVLSVPSQTLRGNLAEWTPYLDPDATLVSLMKGIELGTTKRMSQVIMETAGVPADRVVVVSGPNLAPEIAAEQPAATVVAGTDSRRTALVQSSIRTPYFRPYTNDDVIGCELGGAVKNVIALSYGIATAMGFGDNTRAMLMTRGLAETARLGVALGADPITFAGLAGMGDLVASCTSPLARNRTFGEHLGRGETLEQAQAATRQTAEGVKSCLAIRDLARAHGVEMPITEQIERICHEGMDPRLAVDALMSRTAKPESYE
SIO_010081: GCE86_RS31380
subclass of: SO_0000673
so part of: GCE86_RS31380
location: complement(3997..5004)
location: region:3997-5004:-1
so has part: feature:3997-5004:-1:exon

WP_154225122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3997-5004:-1:exon

GCE86_RS31385
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31385
old locus tag: GCE86_31425
so part of: sequence
location: complement(5060..5785)
location: region:5060-5785:-1
so has part: feature:5060-5785:-1:exon
subclass of: SO_0000010

position:5060:-1
position: 5060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5785:-1
position: 5785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5060-5785:-1:exon

GCE86_RS31385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31385
old locus tag: GCE86_31425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013474338.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysophospholipid acyltransferase family protein
translation: MAPRRLGFWPRFAVVLVKPVLTVWTRRTWRGMEHLPREGGIIIVPNHISHADPLVSAHFIHDAGRWPQFLGKASVFRVPVIGWILHRCKQIPVERGSVEAARSLDKLVAAVHEGGAVVIYPEGTTTREPDLWPMKGKTGAARLALATGAPVIPVAMVGPEKMFDPRTARVGLRPRTPVTVVAGPPVDLSRWAGATPTRAILEEMTDTIMLRIRDLVAEIRGGTPPPLWERPARTRTPEVTE
SIO_010081: GCE86_RS31385
subclass of: SO_0000673
so part of: GCE86_RS31385
location: complement(5060..5785)
location: region:5060-5785:-1
so has part: feature:5060-5785:-1:exon

WP_154225121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5060-5785:-1:exon

GCE86_RS31390
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
gene: cofC
locus tag: GCE86_RS31390
old locus tag: GCE86_31430
pseudo: true
so part of: sequence
location: 5897..>6433
location: region:5897-6433:1
so has part: feature:5897-6433:1:exon
subclass of: SO_0000010

position:5897:1
position: 5897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6433:1
position: 6433
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5897-6433:1:exon

GCE86_RS31390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
gene: cofC
locus tag: GCE86_RS31390
old locus tag: GCE86_31430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007456429.1
GO function: GO:0043814 - phospholactate guanylyltransferase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 2-phospho-L-lactate guanylyltransferase
SIO_010081: GCE86_RS31390
subclass of: SO_0000673
so part of: GCE86_RS31390
location: 5897..>6433
location: region:5897-6433:1
so has part: feature:5897-6433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5897-6433:1:exon

GCE86_RS32280
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS32280
old locus tag: GCE86_31435
pseudo: true
so part of: sequence
location: complement(<6566..6903)
location: region:6566-6903:-1
so has part: feature:6566-6903:-1:exon
subclass of: SO_0000010

position:6566:-1
position: 6566
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:6903:-1
position: 6903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6566-6903:-1:exon

GCE86_RS32280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS32280
old locus tag: GCE86_31435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007456429.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NTP transferase domain-containing protein
SIO_010081: GCE86_RS32280
subclass of: SO_0000673
so part of: GCE86_RS32280
location: complement(<6566..6903)
location: region:6566-6903:-1
so has part: feature:6566-6903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6566-6903:-1:exon

GCE86_RS31400
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31400
old locus tag: GCE86_31440
so part of: sequence
location: 7018..7743
location: region:7018-7743:1
so has part: feature:7018-7743:1:exon
subclass of: SO_0000010

position:7018:1
position: 7018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7743:1
position: 7743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7018-7743:1:exon

GCE86_RS31400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31400
old locus tag: GCE86_31440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013474338.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysophospholipid acyltransferase family protein
translation: MAPRRLGFWPRFAVVLVKPVLTVWTRRTWRGMEHLPREGGIIIVPNHISHADPLVSAHFIHDAGRWPQFLGKASVFRVPVIGWILHRCKQIPVERGSVEAARSLDKLVAAVHEGGAVVIYPEGTTTREPDLWPMKGKTGAARLALATGAPVIPVAMVGPEKMFDPRTARVGLRPRTPVTVVAGPPVDLSRWAGATPTRAILEEMTDTIMLRIRDLVAEIRGGTPPPLWERPARTRTPEVTE
SIO_010081: GCE86_RS31400
subclass of: SO_0000673
so part of: GCE86_RS31400
location: 7018..7743
location: region:7018-7743:1
so has part: feature:7018-7743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7018-7743:1:exon

GCE86_RS31405
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31405
old locus tag: GCE86_31445
so part of: sequence
location: 7799..8809
location: region:7799-8809:1
so has part: feature:7799-8809:1:exon
subclass of: SO_0000010

position:7799:1
position: 7799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8809:1
position: 8809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7799-8809:1:exon

GCE86_RS31405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31405
old locus tag: GCE86_31445
EC number: 1.1.1.94
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013284538.1
GO component: GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO function: GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO process: GO:0046167 - glycerol-3-phosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
translation: MSGHVAVLGAGSWGTAFAKILADAGREVTILARRASVAEAIRTGRHNPDYLPDVRLPDRVTATGDAEEAIAGAEVVVLSVPSQTLRGNLAEWTPYLDPDATLVSLMKGIELGTTKRMSQVIMETAGVPADRVVVVSGPNLAPEIAAEQPAATVVAGTDSRRTALVQSSIRTPYFRPYTNDDVIGCELGGAVKNVIALSYGIATAMGFGDNTRAMLMTRGLAETARLGVALGADPITFAGLAGMGDLVASCTSPLARNRTFGEHLGRGGETLEQAQAATRQTAEGVKSCLAIRDLARAHGVEMPITEQIERICHEGMDPRLAVDALMSRTAKPESYE
SIO_010081: GCE86_RS31405
subclass of: SO_0000673
so part of: GCE86_RS31405
location: 7799..8809
location: region:7799-8809:1
so has part: feature:7799-8809:1:exon

WP_154230741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7799-8809:1:exon

GCE86_RS31410
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31410
old locus tag: GCE86_31450
so part of: sequence
location: 8817..9929
location: region:8817-9929:1
so has part: feature:8817-9929:1:exon
subclass of: SO_0000010

position:8817:1
position: 8817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9929:1
position: 9929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8817-9929:1:exon

GCE86_RS31410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31410
old locus tag: GCE86_31450
EC number: 4.4.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018800965.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0019346 - transsulfuration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cystathionine gamma-lyase
translation: MTDEWGDGTRSVHAGLPAPEPGQPFLPGPVFAAPYHLDPWRGPEATPNGYGRPDNPTRRLLEAAVGELEGGDCRVFASGQAAITGLLLALLRPGDTVLLPADGYFPVRAFATATLEGIGVRVGFVPTAGPYPSFEGVRLVLLETPANPGLDVADVPALAVAAHGAGALVAVDNTTATPLGQRPLELGADVVVASGTKALTGHSDLLLGYVATRSAELLDAVTAWRTTTGGVPGPFDCWLAHRSLATVDLRLGRQTANAEALARLLAGRDDVTGLRWPGLATDPAYAVASVQMRRMPGVLSFDLGDADRVARFLDASRLVSAATSFGGLHTTADRRAQWGDDTAPGFVRLSCGIEDAADLVADVTAALDAA
SIO_010081: GCE86_RS31410
subclass of: SO_0000673
so part of: GCE86_RS31410
location: 8817..9929
location: region:8817-9929:1
so has part: feature:8817-9929:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8817-9929:1:exon

GCE86_RS31415
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31415
old locus tag: GCE86_31455
so part of: sequence
location: 10101..10892
location: region:10101-10892:1
so has part: feature:10101-10892:1:exon
subclass of: SO_0000010

position:10101:1
position: 10101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10892:1
position: 10892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10101-10892:1:exon

GCE86_RS31415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31415
old locus tag: GCE86_31455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018786291.1
GO function: GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative protein N(5)-glutamine methyltransferase
translation: MPATLFSPDRPALVRRLRAAGCVFAEDEAELLIAAADSAEALTDLVDRRVAGLPLEHLLGWAEFCGLRVAVDPGVFVPRGRTALLVTAAAAVAGPSPAVLDLCCGSGAAALVLHGRLAPRWLAAADVDPAAVACARRNLTPLGVPVYQGDLFAPLPARWRGRLDLVVANAPYVPSDAVAMLPPEARLHEAPVALDGGADGLAVLRRVAAGAAEWLAPGGHLAVEVSAGQATALCAILTDAGLDPSVVHDDDLEATAVTARRPG
SIO_010081: GCE86_RS31415
subclass of: SO_0000673
so part of: GCE86_RS31415
location: 10101..10892
location: region:10101-10892:1
so has part: feature:10101-10892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10101-10892:1:exon

GCE86_RS31420
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31420
old locus tag: GCE86_31460
so part of: sequence
location: 10990..12042
location: region:10990-12042:1
so has part: feature:10990-12042:1:exon
subclass of: SO_0000010

position:10990:1
position: 10990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12042:1
position: 12042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10990-12042:1:exon

GCE86_RS31420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31420
old locus tag: GCE86_31460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018786292.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ROK family protein
translation: MGSAGVPVVVGLDNGGTSNNATVLTVDGRFLVDGLVEIPSEVQAGPEAAIEALARALDGVLALTGVPRELVRAVGLDTPGPASATGVISSRGSTNFSQPAWRGYDVRSALEHRLGLPVVYANDGNAAALYAHHTHFGADAMARSSVAAIVGTGLGGGVVESGRVVGGAAGMAGEFGHVHIPLDGLLGPGQPVPVCACGFAGDVESVASLTAIANNLLPYWLGRFPGHPLAAEEPARAAKLVRGYGERGDPLARELFTQQAMALGRLFTIAANFTDPHAYFVGGGVVEAAPEFRDWFLATVREHTVLRAEQRAVATFALVPDRDMAGARGVAIAALEAVRGGAAAGPLVAG
SIO_010081: GCE86_RS31420
subclass of: SO_0000673
so part of: GCE86_RS31420
location: 10990..12042
location: region:10990-12042:1
so has part: feature:10990-12042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10990-12042:1:exon

GCE86_RS31425
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31425
old locus tag: GCE86_31465
so part of: sequence
location: complement(12123..12323)
location: region:12123-12323:-1
so has part: feature:12123-12323:-1:exon
subclass of: SO_0000010

position:12123:-1
position: 12123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12323:-1
position: 12323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12123-12323:-1:exon

GCE86_RS31425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31425
old locus tag: GCE86_31465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013732063.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF397 domain-containing protein
translation: MNGTNSHRRPVTGWRKSSHSGDEGACVEMAPLPEAVAVRDSKDPAGPVLVFRPAAWAAFTDAPPRP
SIO_010081: GCE86_RS31425
subclass of: SO_0000673
so part of: GCE86_RS31425
location: complement(12123..12323)
location: region:12123-12323:-1
so has part: feature:12123-12323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12123-12323:-1:exon

GCE86_RS31430
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31430
old locus tag: GCE86_31470
so part of: sequence
location: complement(12329..13174)
location: region:12329-13174:-1
so has part: feature:12329-13174:-1:exon
subclass of: SO_0000010

position:12329:-1
position: 12329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13174:-1
position: 13174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12329-13174:-1:exon

GCE86_RS31430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31430
old locus tag: GCE86_31470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007075173.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MAPKTARARRLGIALRTHREAAGLTLEAAADEINSTRSTLSRYENAQTLVSPATVRALLTLYGVGPDEIAAAVQLAKDARKPGWWVSYSYLLDRRTIDFIALEAEATGIANFEPSVVPGLLQTADYIRGVMRGGPHTLSDEQVEQRVKLRLDRQQRLTGDDPPILDAIIDEGALLRPVGDRTVMGGQLQHLLKMAELPNITVQVIPLSAGYHRGTRGSLHILEFADPEDPIIASVETVAGQMVLDRPGDLRTCTKIMEHLRTVALSPAASRDELLRLLNER
SIO_010081: GCE86_RS31430
subclass of: SO_0000673
so part of: GCE86_RS31430
location: complement(12329..13174)
location: region:12329-13174:-1
so has part: feature:12329-13174:-1:exon

WP_154225127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12329-13174:-1:exon

GCE86_RS31435
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31435
old locus tag: GCE86_31475
so part of: sequence
location: 13452..13682
location: region:13452-13682:1
so has part: feature:13452-13682:1:exon
subclass of: SO_0000010

position:13452:1
position: 13452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13682:1
position: 13682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13452-13682:1:exon

GCE86_RS31435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31435
old locus tag: GCE86_31475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013284544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRFLVVLTDVRPLDGLWRNERTSPERRRQVVGASSREAADRIAGAFMALGMVRAGRQRVKVIAVGRRPRTPDHLN
SIO_010081: GCE86_RS31435
subclass of: SO_0000673
so part of: GCE86_RS31435
location: 13452..13682
location: region:13452-13682:1
so has part: feature:13452-13682:1:exon

WP_154225128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13452-13682:1:exon

GCE86_RS31440
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31440
old locus tag: GCE86_31480
pseudo: true
so part of: sequence
location: 13935..15028
location: region:13935-15028:1
so has part: feature:13935-15028:1:exon
subclass of: SO_0000010

position:13935:1
position: 13935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15028:1
position: 15028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13935-15028:1:exon

GCE86_RS31440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31440
old locus tag: GCE86_31480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013284545.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: D-alanine--D-alanine ligase family protein
SIO_010081: GCE86_RS31440
subclass of: SO_0000673
so part of: GCE86_RS31440
location: 13935..15028
location: region:13935-15028:1
so has part: feature:13935-15028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13935-15028:1:exon

GCE86_RS31445
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31445
old locus tag: GCE86_31485
so part of: sequence
location: complement(15052..15666)
location: region:15052-15666:-1
so has part: feature:15052-15666:-1:exon
subclass of: SO_0000010

position:15052:-1
position: 15052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15666:-1
position: 15666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15052-15666:-1:exon

GCE86_RS31445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31445
old locus tag: GCE86_31485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018816386.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3515 family protein
translation: MEEITSSPAAEESRPARRDRSTRSAALWATLVAVPVTLAVAGFTFAKLAPDSPAAAPSPSASAARPQSSAPVELPAPALAERPATVCRALVSQLPATVRDLAQRPVTAGAEQNAAYGDPALTVACGGTPPIVQPTDEVWSVNKVCWHAVQEADATVLTTVDRETPVRVRVPKQYEQPLQWVTPISDAVVASVPAAKTAPSGCSA
SIO_010081: GCE86_RS31445
subclass of: SO_0000673
so part of: GCE86_RS31445
location: complement(15052..15666)
location: region:15052-15666:-1
so has part: feature:15052-15666:-1:exon

WP_208818060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15052-15666:-1:exon

GCE86_RS31450
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31450
old locus tag: GCE86_31490
so part of: sequence
location: complement(15667..15900)
location: region:15667-15900:-1
so has part: feature:15667-15900:-1:exon
subclass of: SO_0000010

position:15667:-1
position: 15667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15900:-1
position: 15900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15667-15900:-1:exon

GCE86_RS31450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31450
old locus tag: GCE86_31490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007456453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC ligand binding domain-containing protein
translation: MVQAYILIQTEVGRARDVAGQIADLAGVVRVDAVTGPYDVVVLTEANTVDELGKLIVSKVQLVPGITRTLTCSVVRL
SIO_010081: GCE86_RS31450
subclass of: SO_0000673
so part of: GCE86_RS31450
location: complement(15667..15900)
location: region:15667-15900:-1
so has part: feature:15667-15900:-1:exon

WP_091268792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15667-15900:-1:exon

GCE86_RS31455
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31455
old locus tag: GCE86_31495
pseudo: true
so part of: sequence
location: 16063..17009
location: region:16063-17009:1
so has part: feature:16063-17009:1:exon
subclass of: SO_0000010

position:16063:1
position: 16063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17009:1
position: 17009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16063-17009:1:exon

GCE86_RS31455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31455
old locus tag: GCE86_31495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018786299.1
GO function: GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: thiamine-phosphate kinase
SIO_010081: GCE86_RS31455
subclass of: SO_0000673
so part of: GCE86_RS31455
location: 16063..17009
location: region:16063-17009:1
so has part: feature:16063-17009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16063-17009:1:exon

GCE86_RS31460
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31460
old locus tag: GCE86_31500
so part of: sequence
location: 17074..17535
location: region:17074-17535:1
so has part: feature:17074-17535:1:exon
subclass of: SO_0000010

position:17074:1
position: 17074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17535:1
position: 17535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17074-17535:1:exon

GCE86_RS31460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31460
old locus tag: GCE86_31500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018786300.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MSEIEIRAQRFDAPESQALIRAALADLGARYGGNGDDTPVDAAEFEPPAGTFLVAYLDGEPVGCGGWRSHGDDTAELKRMYTAPAARGRGVARAVLAAVERSARDHGRKRIILECGDKQPEAIAMYTSAGYERIPNFGFYQDAPGCLSYGRTL
SIO_010081: GCE86_RS31460
subclass of: SO_0000673
so part of: GCE86_RS31460
location: 17074..17535
location: region:17074-17535:1
so has part: feature:17074-17535:1:exon

WP_244317138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17074-17535:1:exon

GCE86_RS31465
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31465
old locus tag: GCE86_31505
so part of: sequence
location: complement(17545..17742)
location: region:17545-17742:-1
so has part: feature:17545-17742:-1:exon
subclass of: SO_0000010

position:17545:-1
position: 17545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17742:-1
position: 17742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17545-17742:-1:exon

GCE86_RS31465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31465
old locus tag: GCE86_31505
inference: COORDINATES: protein motif:HMM:NF037860.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDGRRAALRVPGVLDVQIEAKVGDQVPELLSSAHRSGHLLAWGATPTDAESAARKAAGEIRITAG
SIO_010081: GCE86_RS31465
subclass of: SO_0000673
so part of: GCE86_RS31465
location: complement(17545..17742)
location: region:17545-17742:-1
so has part: feature:17545-17742:-1:exon

WP_244317335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17545-17742:-1:exon

GCE86_RS31470
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31470
old locus tag: GCE86_31510
so part of: sequence
location: 17747..17962
location: region:17747-17962:1
so has part: feature:17747-17962:1:exon
subclass of: SO_0000010

position:17747:1
position: 17747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17962:1
position: 17962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17747-17962:1:exon

GCE86_RS31470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31470
old locus tag: GCE86_31510
inference: COORDINATES: protein motif:HMM:NF037860.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRPTAVDGRRAALRVPGVLDVQIEAKVGDQVPELLSSAHRSGHLLAWGATPTDAESAARKAAGEIRITAG
SIO_010081: GCE86_RS31470
subclass of: SO_0000673
so part of: GCE86_RS31470
location: 17747..17962
location: region:17747-17962:1
so has part: feature:17747-17962:1:exon

WP_244317336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17747-17962:1:exon

GCE86_RS31475
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31475
old locus tag: GCE86_31515
so part of: sequence
location: complement(17972..18433)
location: region:17972-18433:-1
so has part: feature:17972-18433:-1:exon
subclass of: SO_0000010

position:17972:-1
position: 17972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18433:-1
position: 18433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17972-18433:-1:exon

GCE86_RS31475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31475
old locus tag: GCE86_31515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018786300.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MSEIEIRAQRFDAPESQALIRAALADLGARYGGNGDDTPVDAAEFEPPAGTFLVAYLDGEPVGCGGWRSHGDDTAELKRMYTAPAARGRGVARAVLAAVERSARDHGRKRIILECGDKQPEAIAMYTSAGYERIPNFGFYQDAPGCLSYGRTL
SIO_010081: GCE86_RS31475
subclass of: SO_0000673
so part of: GCE86_RS31475
location: complement(17972..18433)
location: region:17972-18433:-1
so has part: feature:17972-18433:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17972-18433:-1:exon

GCE86_RS31480
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31480
old locus tag: GCE86_31520
so part of: sequence
location: complement(18498..19445)
location: region:18498-19445:-1
so has part: feature:18498-19445:-1:exon
subclass of: SO_0000010

position:18498:-1
position: 18498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19445:-1
position: 19445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18498-19445:-1:exon

GCE86_RS31480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31480
old locus tag: GCE86_31520
EC number: 2.7.4.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018786299.1
GO function: GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine-phosphate kinase
translation: MTVAGVGEFGLIDRVTARLAQGESCLLGPGDDAAVVAAPDRRVVASTDVLVEGRHFRRDWSGARDVGHRAAAANLADIAAMGATPTALLVALCMPADLDPGWAEELADGLGAEAALVGASVVGGDMSASPTLTVAVTALGDLAGRPPVVRSGARPGDVVALAGRTGWAAAGYTVLSRGFRTPRLLVEAFRRPEVPYAAGPEAAAHGATAMIDVSDGLLADLGHVAKASGVAVDLTREAFEVPRQMRDAAQALGVDPYSWILAGGDDHALAATFPAEATLPAGWRPVGRVIEGTGVTVDGTPYAGPAGWDHFRRGE
SIO_010081: GCE86_RS31480
subclass of: SO_0000673
so part of: GCE86_RS31480
location: complement(18498..19445)
location: region:18498-19445:-1
so has part: feature:18498-19445:-1:exon

WP_154225130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18498-19445:-1:exon

GCE86_RS31485
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31485
old locus tag: GCE86_31525
so part of: sequence
location: 19608..19841
location: region:19608-19841:1
so has part: feature:19608-19841:1:exon
subclass of: SO_0000010

position:19608:1
position: 19608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19841:1
position: 19841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19608-19841:1:exon

GCE86_RS31485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31485
old locus tag: GCE86_31525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007456453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC ligand binding domain-containing protein
translation: MVQAYILIQTEVGRARDVAGQIADLAGVVRVDAVTGPYDVVVLTEANTVDELGKLIVSKVQLVPGITRTLTCSVVRL
SIO_010081: GCE86_RS31485
subclass of: SO_0000673
so part of: GCE86_RS31485
location: 19608..19841
location: region:19608-19841:1
so has part: feature:19608-19841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19608-19841:1:exon

GCE86_RS31490
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31490
old locus tag: GCE86_31530
so part of: sequence
location: 19842..20456
location: region:19842-20456:1
so has part: feature:19842-20456:1:exon
subclass of: SO_0000010

position:19842:1
position: 19842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20456:1
position: 20456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19842-20456:1:exon

GCE86_RS31490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31490
old locus tag: GCE86_31530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018816386.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3515 family protein
translation: MEEITSSPAAEESRPARRDRSTRSAALWATLVAVPVTLAVAGFTFAKLAPDSPAAAPSPSASAARPQSSAPVELPAPALAERPATVCRALVSQLPATVRDLAQRPVTAGAEQNAAYGDPALTVACGGTPPIVQPTDEVWSVNKVCWHAVQEADATVLTTVDRETPVRVRVPKQYEQPLQWVTPISDAVVASVPAAKTAPSGCSA
SIO_010081: GCE86_RS31490
subclass of: SO_0000673
so part of: GCE86_RS31490
location: 19842..20456
location: region:19842-20456:1
so has part: feature:19842-20456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19842-20456:1:exon

GCE86_RS31495
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31495
old locus tag: GCE86_31535
so part of: sequence
location: complement(20480..21574)
location: region:20480-21574:-1
so has part: feature:20480-21574:-1:exon
subclass of: SO_0000010

position:20480:-1
position: 20480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21574:-1
position: 21574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20480-21574:-1:exon

GCE86_RS31495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31495
old locus tag: GCE86_31535
EC number: 6.3.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013284545.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanine--D-alanine ligase family protein
translation: MTTPGKTRVAIVFGGRSPEHGISCVSAGSVLAALDPDEFEVVPVGITRQGQWVLASGDPGQLAIADRKLPEITAGSGAELVLRADPAVGGLMVLDPTQGPVALADVDVVFPVLHGAYGEDGTIQGMLEMADIPYVGANVFASAAAMDKEFTKKLCAAEGIPVGPYVVLRAGMTLTEEDKERLGLPVFVKPSRAGSSFGITKVDDWAQLDAAVATAREIDTKVLVEGAIVGREIECGVLEGEAGGAPEASVLAEVRVVSGHDWYDFEAKYIDDACEYDIPANLPEHVTRQVREYATRAFTALDCSGLARADFFVTPELDVYLNEINTMPGFTPTSMFPRMWAASGLEYPKLVNRLIRTALRRAGR
SIO_010081: GCE86_RS31495
subclass of: SO_0000673
so part of: GCE86_RS31495
location: complement(20480..21574)
location: region:20480-21574:-1
so has part: feature:20480-21574:-1:exon

WP_154225129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20480-21574:-1:exon

GCE86_RS31500
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31500
old locus tag: GCE86_31540
so part of: sequence
location: complement(21829..22059)
location: region:21829-22059:-1
so has part: feature:21829-22059:-1:exon
subclass of: SO_0000010

position:21829:-1
position: 21829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22059:-1
position: 22059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21829-22059:-1:exon

GCE86_RS31500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31500
old locus tag: GCE86_31540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013284544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRFLVVLTDVRPLDGLWRNERTSPERRRQVVGASSREAADRIAGAFMALGMVRAGRQRVKVIAVGRRPRTPDHLN
SIO_010081: GCE86_RS31500
subclass of: SO_0000673
so part of: GCE86_RS31500
location: complement(21829..22059)
location: region:21829-22059:-1
so has part: feature:21829-22059:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21829-22059:-1:exon

GCE86_RS31505
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31505
old locus tag: GCE86_31545
so part of: sequence
location: 22334..23179
location: region:22334-23179:1
so has part: feature:22334-23179:1:exon
subclass of: SO_0000010

position:22334:1
position: 22334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23179:1
position: 23179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22334-23179:1:exon

GCE86_RS31505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31505
old locus tag: GCE86_31545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007075173.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MAPKTARARRLGIALRTHREAAGLTLEAAADEINSTRSTLSRYENAQTLVSPATVRALLTLYGVGPDEIAAAVQLAKDARKPGWWVSYSYLLDRRTIDFIALEAEATGIANFEPSVVPGLLQTADYIRGVMRGGPHTLSDEQVEQRVKLRLDRQQRLTGDDPPILDAIIDEGALLRPVGDRTVMGGQLQHLLKMAELPNITVQVIPLSAGYHRGTRGSLHILEFADPEDPIIASVETVAGQMVLDRPGDLRTCTKIMEHLRTVALSPAASRDELLRLLNER
SIO_010081: GCE86_RS31505
subclass of: SO_0000673
so part of: GCE86_RS31505
location: 22334..23179
location: region:22334-23179:1
so has part: feature:22334-23179:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22334-23179:1:exon

GCE86_RS31510
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31510
old locus tag: GCE86_31550
so part of: sequence
location: 23185..23385
location: region:23185-23385:1
so has part: feature:23185-23385:1:exon
subclass of: SO_0000010

position:23185:1
position: 23185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23385:1
position: 23385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23185-23385:1:exon

GCE86_RS31510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31510
old locus tag: GCE86_31550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013732063.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF397 domain-containing protein
translation: MNGTNSHRRPVTGWRKSSHSGDEGACVEMAPLPEAVAVRDSKDPAGPVLVFRPAAWAAFTDAPPRP
SIO_010081: GCE86_RS31510
subclass of: SO_0000673
so part of: GCE86_RS31510
location: 23185..23385
location: region:23185-23385:1
so has part: feature:23185-23385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23185-23385:1:exon

GCE86_RS31515
type: Gene
subclass of: SO_0000704
RO_0002162: 1914461
locus tag: GCE86_RS31515
old locus tag: GCE86_31555
so part of: sequence
location: complement(23466..24518)
location: region:23466-24518:-1
so has part: feature:23466-24518:-1:exon
subclass of: SO_0000010

position:23466:-1
position: 23466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24518:-1
position: 24518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23466-24518:-1:exon

GCE86_RS31515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1914461
locus tag: GCE86_RS31515
old locus tag: GCE86_31555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018786292.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ROK family protein
translation: MGSAGVPVVVGLDNGGTSNNATVLTVDGRFLVDGLVEIPSEVQAGPEAAIEALARALDGVLALTGVPRELVRAVGLDTPGPASATGVISSRGSTNFSQPAWRGYDVRSALEHRLGLPVVYANDGNAAALYAHHTHFGADAMARSSVAAIVGTGLGGGVVESGRVVGGAAGMAGEFGHVHIPLDGLLGPGQPVPVCACGFAGDVESVASLTAIANNLLPYWLGRFPGHPLAAEEPARAAKLVRGYGERGDPLARELFTQQAMALGRLFTIAANFTDPHAYFVGGGVVEAAPEFRDWFLATVREHTVLRAEQRAVATFALVPDRDMAGARGVAIAALEAVRGGAAAGPLVAG
SIO_010081: GCE86_RS31515
subclass of: SO_0000673
so part of: GCE86_RS31515
location: complement(23466..24518)
location: region:23466-24518:-1
so has part: feature:23466-24518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23466-24518:-1:exon