Thaumasiovibrio subtropicus strain C4V358 chromosome 2, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Thaumasiovibrio.
Thaumasiovibrio occultus gen. nov. sp. nov. and Thaumasiovibrio subtropicus sp. nov. within the family Vibrionaceae, isolated from coral reef seawater off Ishigaki Island, Japan
Thaumasiovibrio subtropicus C4V358T whole genome sequence
Submitted (20-APR-2020) Contact:Tomoo Sawabe Hokkaido University, Faculty of Fisheries Sciences; 3-1-1 Minato-cho, Hakodate, Hokkaido 041-8611, Japan
REFSEQ INFORMATION: The reference sequence is identical to\nAP023055.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.7\nGenome Coverage :: 50x\nSequencing Technology :: Illumina MiSeq; ONT MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/07/2023 05:56:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,013\nCDSs (total) :: 4,849\nGenes (coding) :: 4,784\nCDSs (with protein) :: 4,784\nGenes (RNA) :: 164\nrRNAs :: 13, 12, 12 (5S, 16S, 23S)\ncomplete rRNAs :: 13, 12, 12 (5S, 16S, 23S)\ntRNAs :: 122\nncRNAs :: 5\nPseudo Genes (total) :: 65\nCDSs (without protein) :: 65\nPseudo Genes (ambiguous residues) :: 0 of 65\nPseudo Genes (frameshifted) :: 26 of 65\nPseudo Genes (incomplete) :: 42 of 65\nPseudo Genes (internal stop) :: 12 of 65\nPseudo Genes (multiple problems) :: 13 of 65\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Thaumasiovibrio subtropicus
COORDINATES: similar to AA sequence:RefSeq:WP_006069717.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF023568.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: similar to AA sequence:RefSeq:WP_017051897.1
COORDINATES: similar to AA sequence:RefSeq:WP_017188307.1
glutathionylspermidine synthase family protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_016960076.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: similar to AA sequence:RefSeq:WP_012129654.1
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: protein motif:HMM:NF024376.2
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: protein motif:HMM:NF024371.2
COORDINATES: similar to AA sequence:RefSeq:WP_008989476.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - monoatomic anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: similar to AA sequence:RefSeq:WP_006231535.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017094003.1
COORDINATES: similar to AA sequence:RefSeq:WP_017094004.1
COORDINATES: protein motif:HMM:NF025637.2
COORDINATES: protein motif:HMM:NF025391.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611907.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016797422.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017074954.1
COORDINATES: similar to AA sequence:RefSeq:WP_004737550.1
COORDINATES: similar to AA sequence:RefSeq:WP_017420647.1
COORDINATES: similar to AA sequence:RefSeq:WP_005382553.1
COORDINATES: similar to AA sequence:RefSeq:WP_004399814.1
COORDINATES: protein motif:HMM:NF033542.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1
COORDINATES: similar to AA sequence:RefSeq:WP_016788904.1
GO:0015074 - DNA integration [Evidence IEA]
phage integrase N-terminal SAM-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009847099.1
COORDINATES: protein motif:HMM:NF018648.2
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017037197.1
COORDINATES: similar to AA sequence:RefSeq:WP_017630327.1
COORDINATES: similar to AA sequence:RefSeq:WP_019823379.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005531877.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione-dependent disulfide-bond oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_016795590.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005421830.1
COORDINATES: similar to AA sequence:RefSeq:WP_010452121.1
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017034407.1
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: similar to AA sequence:RefSeq:WP_016959981.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_002538299.1
COORDINATES: similar to AA sequence:RefSeq:WP_006711116.1
COORDINATES: similar to AA sequence:RefSeq:WP_002032060.1
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_004727074.1
COORDINATES: protein motif:HMM:NF023714.2
COORDINATES: similar to AA sequence:RefSeq:WP_017630716.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017076955.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF038094.1
COORDINATES: similar to AA sequence:RefSeq:WP_007470521.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004397812.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_017103278.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017072727.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017686293.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
oxygen-insensitive NAD(P)H nitroreductase
COORDINATES: similar to AA sequence:RefSeq:WP_001898099.1
COORDINATES: similar to AA sequence:RefSeq:WP_017053838.1
COORDINATES: similar to AA sequence:RefSeq:WP_011218775.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017069102.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012257.2
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005482589.1
GO:0016901 - oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor [Evidence IEA]; GO:0070968 - pyrroloquinoline quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006710317.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006710318.1
COORDINATES: similar to AA sequence:RefSeq:WP_006710319.1
COORDINATES: similar to AA sequence:RefSeq:WP_006880653.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017019730.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]; GO:0016830 - carbon-carbon lyase activity [Evidence IEA]; GO:0016833 - oxo-acid-lyase activity [Evidence IEA]
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_017033515.1
COORDINATES: similar to AA sequence:RefSeq:WP_006069860.1
COORDINATES: similar to AA sequence:RefSeq:WP_008222617.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016796101.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_017791349.1
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004401190.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013933.2
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF012345.2
COORDINATES: protein motif:HMM:TIGR00392.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013572155.1
COORDINATES: similar to AA sequence:RefSeq:WP_020429435.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006006 - glucose metabolic process [Evidence IEA]
glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF013722.2
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_004727613.1
Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009848661.1
COORDINATES: similar to AA sequence:RefSeq:WP_017046164.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: similar to AA sequence:RefSeq:WP_016959221.1
COORDINATES: similar to AA sequence:RefSeq:WP_016768533.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: similar to AA sequence:RefSeq:WP_006232860.1
GO:0016301 - kinase activity [Evidence IEA]; GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]; GO:0090582 - protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity [Evidence IEA]; GO:0090563 - protein-phosphocysteine-sugar phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017015238.1
COORDINATES: protein motif:HMM:NF013106.2
transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020429507.1
COORDINATES: similar to AA sequence:RefSeq:WP_011079906.1
GO:0015250 - water channel activity [Evidence IEA]
GO:0006833 - water transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017016129.1
COORDINATES: similar to AA sequence:RefSeq:WP_012516820.1
COORDINATES: similar to AA sequence:RefSeq:WP_019825074.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017032034.1
COORDINATES: similar to AA sequence:RefSeq:WP_016788875.1
COORDINATES: similar to AA sequence:RefSeq:WP_017635735.1
COORDINATES: similar to AA sequence:RefSeq:WP_004745632.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017039209.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004398333.1
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013885.2
COORDINATES: similar to AA sequence:RefSeq:WP_005377819.1
COORDINATES: protein motif:HMM:NF014564.2
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000491252.1
COORDINATES: similar to AA sequence:RefSeq:WP_017634637.1
COORDINATES: similar to AA sequence:RefSeq:WP_005452755.1
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017819839.1
COORDINATES: similar to AA sequence:RefSeq:WP_005432281.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
histidine kinase dimerization/phospho-acceptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016768119.1
COORDINATES: similar to AA sequence:RefSeq:WP_004731401.1
COORDINATES: similar to AA sequence:RefSeq:WP_016959756.1
COORDINATES: similar to AA sequence:RefSeq:WP_017026580.1
COORDINATES: similar to AA sequence:RefSeq:WP_017632244.1
GO:0042597 - periplasmic space [Evidence IEA]
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017028320.1
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017028319.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_019825389.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_017243006.1
COORDINATES: protein motif:HMM:NF024996.2
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019276146.1
COORDINATES: protein motif:HMM:NF019844.2
GO:0070064 - proline-rich region binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_004401800.1
COORDINATES: similar to AA sequence:RefSeq:WP_004401797.1
COORDINATES: protein motif:HMM:NF012869.2
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter ATP-binding protein/permease
COORDINATES: protein motif:HMM:NF018485.2
COORDINATES: similar to AA sequence:RefSeq:WP_013184164.1
COORDINATES: protein motif:HMM:NF022511.2
COORDINATES: similar to AA sequence:RefSeq:WP_005365799.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
30S ribosomal protein S6--L-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_001882815.1
COORDINATES: similar to AA sequence:RefSeq:WP_011218466.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]; GO:0006468 - protein phosphorylation [Evidence IEA]
pyruvate, water dikinase regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_006231765.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040323.1
COORDINATES: similar to AA sequence:RefSeq:WP_002043799.1
COORDINATES: protein motif:HMM:TIGR00229.1
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017033487.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017033488.1
COORDINATES: protein motif:HMM:NF040699.1
COORDINATES: similar to AA sequence:RefSeq:WP_006880474.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031616.1
COORDINATES: similar to AA sequence:RefSeq:WP_017081031.1
COORDINATES: similar to AA sequence:RefSeq:WP_004733562.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:NF024799.2
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017101753.1
COORDINATES: similar to AA sequence:RefSeq:WP_005594942.1
COORDINATES: protein motif:HMM:NF012907.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF022653.2
COORDINATES: similar to AA sequence:RefSeq:WP_005421776.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0018209 - peptidyl-serine modification [Evidence IEA]; GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006070272.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009705705.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_017023877.1
GO:0008773 - [protein-PII] uridylyltransferase activity [Evidence IEA]
DUF294 nucleotidyltransferase-like domain-containing protein
COORDINATES: protein motif:HMM:NF013122.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006070261.1
COORDINATES: similar to AA sequence:RefSeq:WP_017633354.1
COORDINATES: similar to AA sequence:RefSeq:WP_011081814.1
COORDINATES: similar to AA sequence:RefSeq:WP_004727634.1
COORDINATES: similar to AA sequence:RefSeq:WP_010431375.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: similar to AA sequence:RefSeq:WP_005497706.1
COORDINATES: similar to AA sequence:RefSeq:WP_017633352.1
COORDINATES: similar to AA sequence:RefSeq:WP_017022302.1
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012245.2
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_008216170.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF020448.2
COORDINATES: protein motif:HMM:NF019474.2
alpha/beta hydrolase fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000085702.1
COORDINATES: similar to AA sequence:RefSeq:WP_004402175.1
COORDINATES: similar to AA sequence:RefSeq:WP_017027238.1
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006231529.1
COORDINATES: similar to AA sequence:RefSeq:WP_001935180.1
COORDINATES: similar to AA sequence:RefSeq:WP_000017534.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004743933.1
COORDINATES: similar to AA sequence:RefSeq:WP_005442521.1
COORDINATES: similar to AA sequence:RefSeq:WP_004730220.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002542691.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_002541855.1
COORDINATES: similar to AA sequence:RefSeq:WP_013867828.1
major facilitator superfamily transporter
COORDINATES: similar to AA sequence:RefSeq:WP_004743667.1
COORDINATES: similar to AA sequence:RefSeq:WP_003138839.1
COORDINATES: protein motif:HMM:NF036460.2
COORDINATES: protein motif:HMM:NF012706.2
GO:0098561 - methyl accepting chemotaxis protein complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004402540.1
COORDINATES: similar to AA sequence:RefSeq:WP_006714120.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017819648.1
COORDINATES: similar to AA sequence:RefSeq:WP_005366040.1
COORDINATES: similar to AA sequence:RefSeq:WP_004744939.1
COORDINATES: similar to AA sequence:RefSeq:WP_006877332.1
COORDINATES: similar to AA sequence:RefSeq:WP_017636149.1
COORDINATES: similar to AA sequence:RefSeq:WP_001260796.1
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_000077272.1
COORDINATES: similar to AA sequence:RefSeq:WP_011495583.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025451.2
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_001258569.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_000277238.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: protein motif:HMM:NF014825.2
SEC-C metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF018561.2
COORDINATES: similar to AA sequence:RefSeq:WP_006228875.1
GO:0004456 - phosphogluconate dehydratase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017420425.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046316 - gluconokinase activity [Evidence IEA]
GO:0046177 - D-gluconate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020196675.1
keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase
COORDINATES: protein motif:HMM:NF007311.0
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
PTS cellobiose/arbutin/salicin transporter subunit IIBC
COORDINATES: similar to AA sequence:RefSeq:WP_006069679.1
COORDINATES: similar to AA sequence:RefSeq:WP_017057458.1
COORDINATES: similar to AA sequence:RefSeq:WP_017013586.1
COORDINATES: protein motif:HMM:TIGR03784.1
COORDINATES: protein motif:HMM:TIGR03788.1
marine proteobacterial sortase target protein
COORDINATES: similar to AA sequence:RefSeq:WP_017050939.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017064223.1
COORDINATES: similar to AA sequence:RefSeq:WP_016769011.1
COORDINATES: similar to AA sequence:RefSeq:WP_017038370.1
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017434.2
COORDINATES: similar to AA sequence:RefSeq:WP_009707053.1
COORDINATES: similar to AA sequence:RefSeq:WP_008076810.1
COORDINATES: protein motif:HMM:TIGR01730.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007464528.1
COORDINATES: protein motif:HMM:TIGR01845.1
GO:0009279 - cell outer membrane [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017005475.1
GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011221493.1
COORDINATES: similar to AA sequence:RefSeq:WP_004747347.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017818554.1
COORDINATES: similar to AA sequence:RefSeq:WP_002033387.1
COORDINATES: similar to AA sequence:RefSeq:WP_017024019.1
COORDINATES: similar to AA sequence:RefSeq:WP_012600786.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01844.1
COORDINATES: protein motif:HMM:NF015316.2
outer membrane protein transport protein
COORDINATES: similar to AA sequence:RefSeq:WP_017038274.1
COORDINATES: similar to AA sequence:RefSeq:WP_011263716.1
COORDINATES: similar to AA sequence:RefSeq:WP_006711804.1
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017072731.1
COORDINATES: similar to AA sequence:RefSeq:WP_017819330.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004746386.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009385611.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006879231.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020194675.1
COORDINATES: similar to AA sequence:RefSeq:WP_004400376.1
COORDINATES: similar to AA sequence:RefSeq:WP_017449629.1
MazG nucleotide pyrophosphohydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017034512.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009704058.1
GO:0004801 - transaldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000224891.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005473572.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019830217.1
GO:0008746 - NAD(P)+ transhydrogenase activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_017060102.1
GO:0008750 - NAD(P)+ transhydrogenase (AB-specific) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:NF038216.1
COORDINATES: similar to AA sequence:RefSeq:WP_017038276.1
GntR family transcriptional regulator YhfZ
COORDINATES: similar to AA sequence:RefSeq:WP_009385604.1
COORDINATES: similar to AA sequence:RefSeq:WP_017036399.1
phosphotriesterase homology protein; PhP; YhfV; member of a family of proteins related to phosphotriesterase (PTE); Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017038277.1
COORDINATES: similar to AA sequence:RefSeq:WP_013868382.1
COORDINATES: similar to AA sequence:RefSeq:WP_009385608.1
COORDINATES: similar to AA sequence:RefSeq:WP_017038280.1
GO:0008973 - phosphopentomutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024423.2
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: similar to AA sequence:RefSeq:WP_006962957.1
COORDINATES: similar to AA sequence:RefSeq:WP_002538369.1
COORDINATES: protein motif:HMM:NF015998.2
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:NF017021.2
COORDINATES: similar to AA sequence:RefSeq:WP_020328429.1
COORDINATES: similar to AA sequence:RefSeq:WP_006075133.1
COORDINATES: similar to AA sequence:RefSeq:WP_004405780.1
COORDINATES: similar to AA sequence:RefSeq:WP_004405777.1
COORDINATES: similar to AA sequence:RefSeq:WP_006072538.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012342.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017024207.1
COORDINATES: similar to AA sequence:RefSeq:WP_006229237.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: protein motif:HMM:NF006734.0
GO:0003824 - catalytic activity [Evidence IEA]
LysR substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: similar to AA sequence:RefSeq:WP_017016987.1
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019283072.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004737017.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007463069.1
AlkA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004732835.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF014126.2
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011221940.1
GO:0016531 - copper chaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037472.2
COORDINATES: protein motif:HMM:NF014036.2
COORDINATES: similar to AA sequence:RefSeq:WP_011218758.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006645271.1
COORDINATES: similar to AA sequence:RefSeq:WP_008987431.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004400614.1
COORDINATES: similar to AA sequence:RefSeq:WP_014230569.1
COORDINATES: similar to AA sequence:RefSeq:WP_017051852.1
COORDINATES: similar to AA sequence:RefSeq:WP_017051853.1
COORDINATES: similar to AA sequence:RefSeq:WP_008223241.1
COORDINATES: similar to AA sequence:RefSeq:WP_017018602.1
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF024835.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF027637.2
COORDINATES: protein motif:HMM:NF024675.2
COORDINATES: similar to AA sequence:RefSeq:WP_000099709.1
GO:0030729 - acetoacetate-CoA ligase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007464183.1
GO:0016034 - maleylacetoacetate isomerase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017016660.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004403229.1
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006570 - tyrosine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013868427.1
GO:0004505 - phenylalanine 4-monooxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005461946.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: protein motif:HMM:NF025123.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter six-transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019274306.1
COORDINATES: protein motif:HMM:NF019237.2
COORDINATES: similar to AA sequence:RefSeq:WP_013571533.1
COORDINATES: protein motif:HMM:NF013632.2
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011150553.1
COORDINATES: similar to AA sequence:RefSeq:WP_017421108.1
pilus assembly protein N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011150549.1
COORDINATES: similar to AA sequence:RefSeq:WP_013571538.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017790317.1
COORDINATES: protein motif:HMM:NF020855.2
COORDINATES: similar to AA sequence:RefSeq:WP_011080209.1
COORDINATES: protein motif:HMM:NF024852.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF024260.2
COORDINATES: similar to AA sequence:RefSeq:WP_014204958.1
COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_000634180.1
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013539.2
MurR/RpiR family transcriptional regulator
COORDINATES: protein motif:HMM:NF016241.2
COORDINATES: similar to AA sequence:RefSeq:WP_004405693.1
COORDINATES: similar to AA sequence:RefSeq:WP_011262121.1
GO:0047689 - aspartate racemase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017041548.1
PAS domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_005446897.1
COORDINATES: similar to AA sequence:RefSeq:WP_008076173.1
COORDINATES: similar to AA sequence:RefSeq:WP_017049600.1
COORDINATES: similar to AA sequence:RefSeq:WP_016959160.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
EAL domain-containing response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005454276.1
COORDINATES: protein motif:HMM:NF028512.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014871.2
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005304412.1
COORDINATES: protein motif:HMM:TIGR02421.1
flavohemoglobin expression-modulating QEGLA motif protein
COORDINATES: protein motif:HMM:NF022818.2
COORDINATES: similar to AA sequence:RefSeq:WP_006959821.1
COORDINATES: similar to AA sequence:RefSeq:WP_011261690.1
COORDINATES: similar to AA sequence:RefSeq:WP_006742878.1
COORDINATES: similar to AA sequence:RefSeq:WP_017022070.1
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006228771.1
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019824145.1
COORDINATES: similar to AA sequence:RefSeq:WP_017011818.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_011220216.1
COORDINATES: protein motif:HMM:NF025100.2
beta-ketoacyl synthase chain length factor
COORDINATES: similar to AA sequence:RefSeq:WP_005474116.1
GO:0004035 - alkaline phosphatase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012535655.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010644465.1
COORDINATES: similar to AA sequence:RefSeq:WP_017011311.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:NF024772.2
COORDINATES: protein motif:HMM:NF017820.2
COORDINATES: similar to AA sequence:RefSeq:WP_011220851.1
COORDINATES: similar to AA sequence:RefSeq:WP_007465024.1
proteobacterial dedicated sortase system histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_017015532.1
proteobacterial dedicated sortase system response regulator
COORDINATES: protein motif:HMM:TIGR03789.1
GO:0042834 - peptidoglycan binding [Evidence IEA]
sortase-associated OmpA-like protein PdsO
COORDINATES: protein motif:HMM:NF016895.2
COORDINATES: similar to AA sequence:RefSeq:WP_000017256.1
COORDINATES: similar to AA sequence:RefSeq:WP_005304710.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018305.2
COORDINATES: similar to AA sequence:RefSeq:WP_006647188.1
COORDINATES: similar to AA sequence:RefSeq:WP_016961299.1
COORDINATES: similar to AA sequence:RefSeq:WP_017023645.1
protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
COORDINATES: similar to AA sequence:RefSeq:WP_009704347.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
protein-methionine-sulfoxide reductase catalytic subunit MsrP
COORDINATES: similar to AA sequence:RefSeq:WP_006880163.1
COORDINATES: similar to AA sequence:RefSeq:WP_007468631.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007465423.1
Lpp/OprI family alanine-zipper lipoprotein
COORDINATES: similar to AA sequence:RefSeq:WP_005593434.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005423228.1
COORDINATES: similar to AA sequence:RefSeq:WP_007463710.1
COORDINATES: similar to AA sequence:RefSeq:WP_007464972.1
COORDINATES: similar to AA sequence:RefSeq:WP_010650979.1
glyoxalase/bleomycin resistance/dioxygenase family protein
COORDINATES: protein motif:HMM:NF024739.2
COORDINATES: protein motif:HMM:NF037270.2
COORDINATES: similar to AA sequence:RefSeq:WP_017023179.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024829.2
COORDINATES: similar to AA sequence:RefSeq:WP_004412621.1
nitric oxide reductase transcriptional regulator NorR
COORDINATES: similar to AA sequence:RefSeq:WP_012535620.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005450665.1
hybrid-cluster NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005434241.1
COORDINATES: similar to AA sequence:RefSeq:WP_005422822.1
COORDINATES: similar to AA sequence:RefSeq:WP_016958680.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012464.2
GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004730309.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016786831.1
COORDINATES: protein motif:HMM:NF037779.2
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF025002.2
COORDINATES: similar to AA sequence:RefSeq:WP_017029626.1
COORDINATES: similar to AA sequence:RefSeq:WP_017030971.1
COORDINATES: similar to AA sequence:RefSeq:WP_005534948.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005526563.1
COORDINATES: similar to AA sequence:RefSeq:WP_009840330.1
COORDINATES: protein motif:HMM:NF021532.2
COORDINATES: similar to AA sequence:RefSeq:WP_011080364.1
COORDINATES: similar to AA sequence:RefSeq:WP_002541390.1
COORDINATES: similar to AA sequence:RefSeq:WP_017105714.1
COORDINATES: similar to AA sequence:RefSeq:WP_017052773.1
COORDINATES: similar to AA sequence:RefSeq:WP_006069437.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005391068.1
COORDINATES: similar to AA sequence:RefSeq:WP_019274883.1
COORDINATES: similar to AA sequence:RefSeq:WP_010453359.1
COORDINATES: similar to AA sequence:RefSeq:WP_004745653.1
COORDINATES: similar to AA sequence:RefSeq:WP_020329778.1
COORDINATES: protein motif:HMM:NF014281.2
COORDINATES: protein motif:HMM:TIGR01843.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: similar to AA sequence:RefSeq:WP_014232044.1
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017428883.1
COORDINATES: similar to AA sequence:RefSeq:WP_017422685.1
COORDINATES: similar to AA sequence:RefSeq:WP_011152078.1
COORDINATES: similar to AA sequence:RefSeq:WP_017012369.1
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: similar to AA sequence:RefSeq:WP_017447618.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_008989522.1
COORDINATES: protein motif:HMM:NF020469.2
COORDINATES: protein motif:HMM:NF018717.2
COORDINATES: similar to AA sequence:RefSeq:WP_007464143.1
COORDINATES: similar to AA sequence:RefSeq:WP_012533060.1
COORDINATES: similar to AA sequence:RefSeq:WP_017818820.1
COORDINATES: similar to AA sequence:RefSeq:WP_017050143.1
COORDINATES: similar to AA sequence:RefSeq:WP_006071757.1
COORDINATES: similar to AA sequence:RefSeq:WP_014233048.1
GO:0015293 - symporter activity [Evidence IEA]
bile acid:sodium symporter family protein
COORDINATES: protein motif:HMM:NF020892.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020428893.1
Fe2+-enterobactin ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_000959270.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014204800.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017821440.1
COORDINATES: similar to AA sequence:RefSeq:WP_011152545.1
GO:0055072 - iron ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002541623.1
COORDINATES: similar to AA sequence:RefSeq:WP_001516695.1
COORDINATES: protein motif:HMM:NF025034.2
COORDINATES: similar to AA sequence:RefSeq:WP_004407967.1
COORDINATES: protein motif:HMM:NF028342.2
COORDINATES: similar to AA sequence:RefSeq:WP_002535950.1
COORDINATES: similar to AA sequence:RefSeq:WP_019274226.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017821092.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: similar to AA sequence:RefSeq:WP_004412160.1
GO:0072344 - rescue of stalled ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017052934.1
COORDINATES: similar to AA sequence:RefSeq:WP_005384985.1
GO:0015572 - N-acetylglucosamine transmembrane transporter activity [Evidence IEA]
N-acetylglucosamine-specific PTS transporter subunit IIBC
COORDINATES: similar to AA sequence:RefSeq:WP_005299578.1
COORDINATES: similar to AA sequence:RefSeq:WP_002538178.1
COORDINATES: similar to AA sequence:RefSeq:WP_017008711.1
COORDINATES: similar to AA sequence:RefSeq:WP_002538182.1
COORDINATES: protein motif:HMM:NF017617.2
COORDINATES: protein motif:HMM:NF024921.2
substrate-binding and VWA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005600184.1
COORDINATES: similar to AA sequence:RefSeq:WP_001910373.1
COORDINATES: similar to AA sequence:RefSeq:WP_015727602.1
COORDINATES: similar to AA sequence:RefSeq:WP_005395522.1
COORDINATES: similar to AA sequence:RefSeq:WP_017051206.1
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_000175421.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017013847.1
GO:0004471 - malate dehydrogenase (decarboxylating) (NAD+) activity [Evidence IEA]; GO:0004470 - malic enzyme activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006229562.1
COORDINATES: protein motif:HMM:NF012995.2
COORDINATES: similar to AA sequence:RefSeq:WP_005366333.1
COORDINATES: similar to AA sequence:RefSeq:WP_004412776.1
COORDINATES: similar to AA sequence:RefSeq:WP_004408044.1
COORDINATES: similar to AA sequence:RefSeq:WP_012128765.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017089757.1
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
UDP-glucose--hexose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009695980.1
COORDINATES: similar to AA sequence:RefSeq:WP_000903701.1
COORDINATES: similar to AA sequence:RefSeq:WP_011218385.1
COORDINATES: similar to AA sequence:RefSeq:WP_000089324.1
COORDINATES: similar to AA sequence:RefSeq:WP_005366406.1
COORDINATES: similar to AA sequence:RefSeq:WP_017055177.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012841907.1
COORDINATES: similar to AA sequence:RefSeq:WP_012551982.1
COORDINATES: protein motif:HMM:NF013488.2
COORDINATES: similar to AA sequence:RefSeq:WP_001108810.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013827.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_006958209.1
COORDINATES: protein motif:HMM:NF015669.2
COORDINATES: similar to AA sequence:RefSeq:WP_011261564.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012601104.1
COORDINATES: similar to AA sequence:RefSeq:WP_006229632.1
COORDINATES: similar to AA sequence:RefSeq:WP_017041474.1
COORDINATES: similar to AA sequence:RefSeq:WP_004746076.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005469303.1
COORDINATES: similar to AA sequence:RefSeq:WP_006230000.1
COORDINATES: protein motif:HMM:NF018604.2
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010319646.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]; GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_004730238.1
COORDINATES: similar to AA sequence:RefSeq:WP_006959667.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005502786.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_006229534.1
GO:0003868 - 4-hydroxyphenylpyruvate dioxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011081016.1
COORDINATES: similar to AA sequence:RefSeq:WP_009841622.1
COORDINATES: similar to AA sequence:RefSeq:WP_017106730.1
COORDINATES: similar to AA sequence:RefSeq:WP_019281459.1
COORDINATES: similar to AA sequence:RefSeq:WP_005535973.1
COORDINATES: similar to AA sequence:RefSeq:WP_005502732.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017052254.1
COORDINATES: similar to AA sequence:RefSeq:WP_004732747.1
COORDINATES: similar to AA sequence:RefSeq:WP_011220357.1
GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
N-acetylmuramic acid 6-phosphate etherase
COORDINATES: similar to AA sequence:RefSeq:WP_000706174.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_004574008.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017021609.1
GO:0015103 - inorganic anion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011081206.1
COORDINATES: similar to AA sequence:RefSeq:WP_007462542.1
COORDINATES: protein motif:HMM:NF039907.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016958568.1
COORDINATES: similar to AA sequence:RefSeq:WP_005305551.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024950.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_016958602.1
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004398104.1
COORDINATES: similar to AA sequence:RefSeq:WP_002538234.1
COORDINATES: similar to AA sequence:RefSeq:WP_005364592.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
3-deoxy-7-phosphoheptulonate synthase AroG
COORDINATES: similar to AA sequence:RefSeq:WP_005364501.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016791 - phosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016961428.1
COORDINATES: similar to AA sequence:RefSeq:WP_017043842.1
COORDINATES: similar to AA sequence:RefSeq:WP_004397790.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000005282.1
COORDINATES: similar to AA sequence:RefSeq:WP_005364944.1
COORDINATES: similar to AA sequence:RefSeq:WP_020334145.1
COORDINATES: similar to AA sequence:RefSeq:WP_013867913.1
COORDINATES: similar to AA sequence:RefSeq:WP_017007292.1
COORDINATES: similar to AA sequence:RefSeq:WP_017016492.1
COORDINATES: similar to AA sequence:RefSeq:WP_017064405.1
COORDINATES: similar to AA sequence:RefSeq:WP_015312798.1
COORDINATES: similar to AA sequence:RefSeq:WP_017058090.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019277361.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006072541.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012698.2
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017029519.1
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF017470.2
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004746630.1
GO:0051782 - negative regulation of cell division [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
translesion DNA synthesis-associated protein ImuA
COORDINATES: similar to AA sequence:RefSeq:WP_005595994.1
COORDINATES: similar to AA sequence:RefSeq:WP_006878232.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF012936.2
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007465311.1
COORDINATES: similar to AA sequence:RefSeq:WP_008988906.1
COORDINATES: similar to AA sequence:RefSeq:WP_008078023.1
COORDINATES: similar to AA sequence:RefSeq:WP_004739913.1
COORDINATES: similar to AA sequence:RefSeq:WP_009848502.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004398116.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004737511.1
COORDINATES: protein motif:HMM:NF025939.2
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_017189335.1
COORDINATES: similar to AA sequence:RefSeq:WP_005433901.1
COORDINATES: protein motif:HMM:NF016286.2
ClpXP protease specificity-enhancing factor SspB
COORDINATES: similar to AA sequence:RefSeq:WP_009841944.1
COORDINATES: similar to AA sequence:RefSeq:WP_017016823.1
COORDINATES: similar to AA sequence:RefSeq:WP_004396688.1
COORDINATES: similar to AA sequence:RefSeq:WP_005503305.1
COORDINATES: protein motif:HMM:NF022694.2
COORDINATES: similar to AA sequence:RefSeq:WP_007461637.1
COORDINATES: similar to AA sequence:RefSeq:WP_009698244.1
zinc ribbon domain-containing protein YjdM
COORDINATES: similar to AA sequence:RefSeq:WP_017100914.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_017003116.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005594902.1
COORDINATES: similar to AA sequence:RefSeq:WP_007463212.1
trans-2-enoyl-CoA reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017096969.1
COORDINATES: similar to AA sequence:RefSeq:WP_005523408.1
COORDINATES: similar to AA sequence:RefSeq:WP_009697689.1
COORDINATES: similar to AA sequence:RefSeq:WP_009697688.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004404113.1
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008073399.1
COORDINATES: similar to AA sequence:RefSeq:WP_008073398.1
COORDINATES: similar to AA sequence:RefSeq:WP_004746202.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_004403296.1
COORDINATES: similar to AA sequence:RefSeq:WP_005306679.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_009697999.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_017073632.1
COORDINATES: protein motif:HMM:NF013490.2
COORDINATES: similar to AA sequence:RefSeq:WP_019822916.1
COORDINATES: similar to AA sequence:RefSeq:WP_005433951.1
COORDINATES: similar to AA sequence:RefSeq:WP_016958740.1
heme ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016958739.1
COORDINATES: similar to AA sequence:RefSeq:WP_008075122.1
COORDINATES: similar to AA sequence:RefSeq:WP_017242953.1
COORDINATES: similar to AA sequence:RefSeq:WP_002535873.1
GO:0015031 - protein transport [Evidence IEA]
MotA/TolQ/ExbB proton channel family protein
COORDINATES: protein motif:HMM:TIGR01352.1
COORDINATES: similar to AA sequence:RefSeq:WP_017039824.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
heme anaerobic degradation radical SAM methyltransferase ChuW/HutW
COORDINATES: similar to AA sequence:RefSeq:WP_017031997.1
heme utilization cystosolic carrier protein HutX
COORDINATES: similar to AA sequence:RefSeq:WP_017242949.1
GO:0020037 - heme binding [Evidence IEA]
GO:0042167 - heme catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017016472.1
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
COORDINATES: similar to AA sequence:RefSeq:WP_017016473.1
COORDINATES: similar to AA sequence:RefSeq:WP_009706418.1
COORDINATES: similar to AA sequence:RefSeq:WP_020195589.1
GO:0019104 - DNA N-glycosylase activity [Evidence IEA]
GO:0036297 - interstrand cross-link repair [Evidence IEA]
crosslink repair DNA glycosylase YcaQ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017055196.1
COORDINATES: similar to AA sequence:RefSeq:WP_008079959.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017638.2
COORDINATES: protein motif:HMM:NF022795.2
COORDINATES: similar to AA sequence:RefSeq:WP_017004726.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-F CRISPR-associated endoribonuclease Cas6/Csy4
COORDINATES: similar to AA sequence:RefSeq:WP_017004727.1
COORDINATES: protein motif:HMM:TIGR02565.1
COORDINATES: protein motif:HMM:TIGR02564.1
COORDINATES: protein motif:HMM:TIGR02562.1
GO:0004386 - helicase activity [Evidence IEA]
type I-F CRISPR-associated helicase Cas3f
COORDINATES: similar to AA sequence:RefSeq:WP_017004730.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
type I-F CRISPR-associated endonuclease Cas1f
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: similar to AA sequence:RefSeq:WP_016789553.1
Fe(3+)-hydroxamate ABC transporter permease FhuB
COORDINATES: similar to AA sequence:RefSeq:WP_010447721.1
iron-siderophore ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005444434.1
COORDINATES: similar to AA sequence:RefSeq:WP_017040527.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008199 - ferric iron binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0033214 - siderophore-dependent iron import into cell [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017016497.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018584.2
COORDINATES: similar to AA sequence:RefSeq:WP_017075319.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004457 - lactate dehydrogenase activity [Evidence IEA]
GO:0006089 - lactate metabolic process [Evidence IEA]
FMN-dependent L-lactate dehydrogenase LldD
COORDINATES: similar to AA sequence:RefSeq:WP_016792731.1
COORDINATES: similar to AA sequence:RefSeq:WP_004403995.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0042128 - nitrate assimilation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005387969.1
COORDINATES: similar to AA sequence:RefSeq:WP_006714350.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017820188.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF025489.2
COORDINATES: similar to AA sequence:RefSeq:WP_006230090.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_006742274.1
COORDINATES: similar to AA sequence:RefSeq:WP_007465492.1
COORDINATES: similar to AA sequence:RefSeq:WP_016962517.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_009384708.1
COORDINATES: protein motif:HMM:NF017765.2
sodium-dependent bicarbonate transport family permease
COORDINATES: similar to AA sequence:RefSeq:WP_020328813.1
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009386707.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014205321.1
COORDINATES: similar to AA sequence:RefSeq:WP_016793623.1
COORDINATES: similar to AA sequence:RefSeq:WP_006230361.1
GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011220523.1
COORDINATES: similar to AA sequence:RefSeq:WP_007465826.1
putative sulfate exporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_005435159.1
COORDINATES: similar to AA sequence:RefSeq:WP_005365313.1
bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006229735.1
COORDINATES: similar to AA sequence:RefSeq:WP_007465805.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF023210.2
COORDINATES: similar to AA sequence:RefSeq:WP_017021365.1
COORDINATES: similar to AA sequence:RefSeq:WP_005502528.1
stress response translation initiation inhibitor YciH
COORDINATES: similar to AA sequence:RefSeq:WP_010451836.1
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF024028.2
ribosome recycling factor family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000590113.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000465031.1
phage/plasmid replication protein, II/X family
COORDINATES: similar to AA sequence:RefSeq:WP_019281037.1
COORDINATES: similar to AA sequence:RefSeq:WP_006229780.1
COORDINATES: protein motif:HMM:NF014537.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
replication initiation factor domain-containing protein
COORDINATES: protein motif:HMM:NF036589.2
COORDINATES: similar to AA sequence:RefSeq:WP_015968523.1
COORDINATES: protein motif:HMM:NF022194.2
COORDINATES: protein motif:HMM:NF017518.2
zonular occludens toxin domain-containing protein
COORDINATES: protein motif:HMM:NF023792.2
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_000869988.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_000086652.1
GO:0110001 - toxin-antitoxin complex [Evidence IEA]
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_020911050.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612150.1
COORDINATES: similar to AA sequence:RefSeq:WP_009846547.1
COORDINATES: similar to AA sequence:RefSeq:WP_017046216.1
COORDINATES: similar to AA sequence:RefSeq:WP_005526989.1
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF023802.2
papain-like cysteine protease family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006231642.1
GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0120225 - coenzyme A binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008989481.1
COORDINATES: similar to AA sequence:RefSeq:WP_017447665.1
COORDINATES: similar to AA sequence:RefSeq:WP_005299416.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_005299419.1
FIST N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005457383.1
COORDINATES: similar to AA sequence:RefSeq:WP_004725969.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
cytochrome-c oxidase, cbb3-type subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_006962259.1
cytochrome-c oxidase, cbb3-type subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_006710578.1
cbb3-type cytochrome c oxidase subunit 3
COORDINATES: similar to AA sequence:RefSeq:WP_007467779.1
cytochrome-c oxidase, cbb3-type subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_014231838.1
COORDINATES: similar to AA sequence:RefSeq:WP_020333284.1
COORDINATES: similar to AA sequence:RefSeq:WP_011080460.1
GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
cbb3-type cytochrome oxidase assembly protein CcoS
COORDINATES: similar to AA sequence:RefSeq:WP_017634899.1
COORDINATES: similar to AA sequence:RefSeq:WP_005419235.1
COORDINATES: similar to AA sequence:RefSeq:WP_016962125.1
COORDINATES: similar to AA sequence:RefSeq:WP_005299444.1
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002162535.1
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012376.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008079807.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022652.2
COORDINATES: similar to AA sequence:RefSeq:WP_004395277.1
GO:0004040 - amidase activity [Evidence IEA]
glucosaminidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011218569.1
GO:0070403 - NAD+ binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015679.2
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02665.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0061603 - molybdenum cofactor guanylyltransferase activity [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdenum cofactor guanylyltransferase MobA
COORDINATES: similar to AA sequence:RefSeq:WP_014231605.1
COORDINATES: similar to AA sequence:RefSeq:WP_004396691.1
COORDINATES: similar to AA sequence:RefSeq:WP_005367676.1
COORDINATES: protein motif:HMM:NF019976.2
COORDINATES: similar to AA sequence:RefSeq:WP_005364550.1
COORDINATES: similar to AA sequence:RefSeq:WP_005595583.1
COORDINATES: similar to AA sequence:RefSeq:WP_006071705.1
COORDINATES: similar to AA sequence:RefSeq:WP_004411755.1
COORDINATES: similar to AA sequence:RefSeq:WP_007465365.1
COORDINATES: similar to AA sequence:RefSeq:WP_008080126.1
COORDINATES: similar to AA sequence:RefSeq:WP_019281663.1
COORDINATES: similar to AA sequence:RefSeq:WP_007464167.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_019275881.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: protein motif:HMM:NF016107.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019276246.1
COORDINATES: similar to AA sequence:RefSeq:WP_016798834.1
COORDINATES: similar to AA sequence:RefSeq:WP_011220958.1
GO:0006817 - phosphate ion transport [Evidence IEA]
phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007465648.1
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF021497.2
COORDINATES: similar to AA sequence:RefSeq:WP_017635194.1
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006711481.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF003740.0
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016958742.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017007926.1
COORDINATES: similar to AA sequence:RefSeq:WP_008989310.1
GO:0016746 - acyltransferase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006229706.1
nicotinate-nicotinamide nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005502496.1
GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006229704.1
COORDINATES: similar to AA sequence:RefSeq:WP_005502494.1
COORDINATES: protein motif:HMM:NF025106.2
COORDINATES: protein motif:HMM:NF022512.2
COORDINATES: similar to AA sequence:RefSeq:WP_007465730.1
COORDINATES: similar to AA sequence:RefSeq:WP_017007937.1
COORDINATES: similar to AA sequence:RefSeq:WP_016785255.1
COORDINATES: similar to AA sequence:RefSeq:WP_017007939.1
GO:0008750 - NAD(P)+ transhydrogenase (AB-specific) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019274597.1
COORDINATES: similar to AA sequence:RefSeq:WP_011220973.1
COORDINATES: similar to AA sequence:RefSeq:WP_005502478.1
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
bifunctional UDP-sugar hydrolase/5'-nucleotidase
COORDINATES: similar to AA sequence:RefSeq:WP_007465706.1
COORDINATES: similar to AA sequence:RefSeq:WP_016960233.1
COORDINATES: similar to AA sequence:RefSeq:WP_017025761.1
COORDINATES: similar to AA sequence:RefSeq:WP_010453167.1
COORDINATES: similar to AA sequence:RefSeq:WP_017063327.1
gamma-glutamylcyclotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008216512.1
COORDINATES: protein motif:HMM:NF013884.2
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF018011.2
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: protein motif:HMM:NF014380.2
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: similar to AA sequence:RefSeq:WP_007466006.1
COORDINATES: similar to AA sequence:RefSeq:WP_007466003.1
COORDINATES: similar to AA sequence:RefSeq:WP_007465998.1
Mor transcription activator family protein
COORDINATES: protein motif:HMM:NF019313.2
COORDINATES: similar to AA sequence:RefSeq:WP_007465995.1
COORDINATES: protein motif:HMM:NF022262.2
COORDINATES: similar to AA sequence:RefSeq:WP_007465989.1
COORDINATES: protein motif:HMM:NF023411.2
COORDINATES: similar to AA sequence:RefSeq:WP_000085818.1
COORDINATES: similar to AA sequence:RefSeq:WP_007465984.1
COORDINATES: similar to AA sequence:RefSeq:WP_007465982.1
COORDINATES: similar to AA sequence:RefSeq:WP_007465980.1
COORDINATES: similar to AA sequence:RefSeq:WP_000929398.1
GO:0044423 - virion component [Evidence IEA]
GO:0016032 - viral process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016796564.1
COORDINATES: similar to AA sequence:RefSeq:WP_000845566.1
COORDINATES: similar to AA sequence:RefSeq:WP_001198206.1
Mu-like prophage major head subunit gpT family protein
COORDINATES: protein motif:HMM:NF036841.2
COORDINATES: protein motif:HMM:NF018704.2
COORDINATES: similar to AA sequence:RefSeq:WP_007465956.1
COORDINATES: similar to AA sequence:RefSeq:WP_000087144.1
COORDINATES: similar to AA sequence:RefSeq:WP_007465938.1
COORDINATES: protein motif:HMM:NF024939.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_007468513.1
COORDINATES: similar to AA sequence:RefSeq:WP_004726763.1
COORDINATES: protein motif:HMM:NF020868.2
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
LuxQ periplasmic sensor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611686.1
COORDINATES: similar to AA sequence:RefSeq:WP_017011991.1
COORDINATES: similar to AA sequence:RefSeq:WP_017007257.1
COORDINATES: similar to AA sequence:RefSeq:WP_011263945.1
GO:0008988 - rRNA (adenine-N6-)-methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
COORDINATES: similar to AA sequence:RefSeq:WP_005298941.1
COORDINATES: protein motif:HMM:TIGR02142.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdenum ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006645064.1
GO:0015098 - molybdate ion transmembrane transporter activity [Evidence IEA]
molybdate ABC transporter permease subunit
COORDINATES: protein motif:HMM:TIGR01256.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004743709.1
COORDINATES: similar to AA sequence:RefSeq:WP_005305562.1
COORDINATES: similar to AA sequence:RefSeq:WP_005364518.1
GO:0008859 - exoribonuclease II activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007464129.1
COORDINATES: similar to AA sequence:RefSeq:WP_017111167.1
homocysteine S-methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_001252025.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004398619.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611923.1
COORDINATES: similar to AA sequence:RefSeq:WP_013867972.1
GO:0031460 - glycine betaine transport [Evidence IEA]
glycine betaine/L-proline ABC transporter ATP-binding protein ProV
COORDINATES: protein motif:HMM:NF008196.0
glycine betaine/L-proline ABC transporter permease ProW
COORDINATES: similar to AA sequence:RefSeq:WP_009846457.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
glycine betaine/L-proline ABC transporter substrate-binding protein ProX
COORDINATES: similar to AA sequence:RefSeq:WP_017111175.1
COORDINATES: similar to AA sequence:RefSeq:WP_002539917.1
COORDINATES: similar to AA sequence:RefSeq:WP_005526930.1
COORDINATES: similar to AA sequence:RefSeq:WP_010452490.1
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011220864.1
COORDINATES: similar to AA sequence:RefSeq:WP_004408622.1
COORDINATES: protein motif:HMM:NF016915.2
COORDINATES: protein motif:HMM:NF027363.2
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022537.2
COORDINATES: similar to AA sequence:RefSeq:WP_017011088.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009599258.1
COORDINATES: similar to AA sequence:RefSeq:WP_005470425.1
COORDINATES: similar to AA sequence:RefSeq:WP_006230154.1
COORDINATES: similar to AA sequence:RefSeq:WP_006230155.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007465686.1
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_017015548.1
DUF523 and DUF1722 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016784610.1
COORDINATES: similar to AA sequence:RefSeq:WP_017041342.1
cellulose-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004396900.1
COORDINATES: similar to AA sequence:RefSeq:WP_017791293.1
tagatose bisphosphate family class II aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_004396898.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_004396897.1
PTS galactosamine/N-acetylgalactosamine transporter subunit IIA
COORDINATES: similar to AA sequence:RefSeq:WP_014205355.1
PTS N-acetylgalactosamine transporter subunit IID
COORDINATES: similar to AA sequence:RefSeq:WP_006714594.1
PTS N-acetylgalactosamine transporter subunit IIC
COORDINATES: similar to AA sequence:RefSeq:WP_004726388.1
PTS N-acetylgalactosamine transporter subunit IIB
COORDINATES: similar to AA sequence:RefSeq:WP_004396893.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001094315.1
tagatose-bisphosphate aldolase subunit KbaZ
COORDINATES: similar to AA sequence:RefSeq:WP_005423633.1
COORDINATES: similar to AA sequence:RefSeq:WP_005472423.1
COORDINATES: similar to AA sequence:RefSeq:WP_001898451.1
COORDINATES: similar to AA sequence:RefSeq:WP_019283386.1
COORDINATES: similar to AA sequence:RefSeq:WP_004408987.1
COORDINATES: protein motif:HMM:NF017447.2
COORDINATES: protein motif:HMM:NF016701.2
COORDINATES: similar to AA sequence:RefSeq:WP_005524681.1
COORDINATES: similar to AA sequence:RefSeq:WP_005449838.1
COORDINATES: similar to AA sequence:RefSeq:WP_017051137.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_005429526.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014230735.1
COORDINATES: similar to AA sequence:RefSeq:WP_019830207.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_012477632.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_006880588.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_076611823.1
COORDINATES: similar to AA sequence:RefSeq:WP_016800865.1
COORDINATES: similar to AA sequence:RefSeq:WP_017003415.1
COORDINATES: similar to AA sequence:RefSeq:WP_017037033.1
COORDINATES: similar to AA sequence:RefSeq:WP_020429953.1
GO:0017000 - antibiotic biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017036426.1
COORDINATES: similar to AA sequence:RefSeq:WP_017036427.1
COORDINATES: similar to AA sequence:RefSeq:WP_004398362.1
COORDINATES: similar to AA sequence:RefSeq:WP_016962268.1
COORDINATES: protein motif:HMM:TIGR01426.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: similar to AA sequence:RefSeq:WP_019277369.1
COORDINATES: similar to AA sequence:RefSeq:WP_005439795.1
catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
acetyl-CoA carboxylase carboxyl transferase subunit beta
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF027475.2
COORDINATES: similar to AA sequence:RefSeq:WP_005441849.1
COORDINATES: similar to AA sequence:RefSeq:WP_001291067.1
methyltransferase domain-containing protein
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002540025.1
COORDINATES: similar to AA sequence:RefSeq:WP_004744013.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017020224.1
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF014722.2
protein adenylyltransferase SelO family protein
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF014684.2
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF025885.2
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017017434.1
COORDINATES: similar to AA sequence:RefSeq:WP_007461923.1
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_005299053.1
COORDINATES: protein motif:HMM:NF024758.2
COORDINATES: similar to AA sequence:RefSeq:WP_004400356.1
COORDINATES: protein motif:HMM:NF024486.2
COORDINATES: protein motif:HMM:NF025217.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017104441.1
COORDINATES: similar to AA sequence:RefSeq:WP_005469971.1
COORDINATES: similar to AA sequence:RefSeq:WP_016958724.1
COORDINATES: protein motif:HMM:NF019735.2
GO:0005576 - extracellular region [Evidence IEA]
polysaccharide lyase family 8 super-sandwich domain-containing protein
COORDINATES: protein motif:HMM:NF020084.2
COORDINATES: similar to AA sequence:RefSeq:WP_009385585.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012550114.1
COORDINATES: protein motif:HMM:NF012894.2
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0015288 - porin activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF040127.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF017315.2
COORDINATES: protein motif:HMM:TIGR03361.1
GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
type VI secretion system tip protein TssI/VgrG
COORDINATES: similar to AA sequence:RefSeq:WP_011081383.1
type VI secretion system tube protein Hcp
COORDINATES: similar to AA sequence:RefSeq:WP_004408944.1
GO:0033104 - type VI protein secretion system complex [Evidence IEA]
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03347.1
type VI secretion system baseplate subunit TssG
COORDINATES: protein motif:HMM:TIGR03359.1
type VI secretion system baseplate subunit TssF
COORDINATES: protein motif:HMM:TIGR03357.1
type VI secretion system baseplate subunit TssE
COORDINATES: protein motif:HMM:NF018699.2
type VI secretion system accessory protein TagJ
COORDINATES: protein motif:HMM:TIGR03355.1
type VI secretion system contractile sheath large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007467953.1
COORDINATES: similar to AA sequence:RefSeq:WP_004408930.1
type VI secretion system contractile sheath small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007467958.1
COORDINATES: similar to AA sequence:RefSeq:WP_020196285.1
protein phosphatase 2C domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004408927.1
type VI secretion system-associated protein TagF
COORDINATES: similar to AA sequence:RefSeq:WP_011217431.1
type VI secretion system membrane subunit TssM
COORDINATES: similar to AA sequence:RefSeq:WP_011217430.1
type VI secretion system protein TssL, long form
COORDINATES: similar to AA sequence:RefSeq:WP_017422722.1
type VI secretion system baseplate subunit TssK
COORDINATES: similar to AA sequence:RefSeq:WP_005499044.1
type VI secretion system lipoprotein TssJ
COORDINATES: protein motif:HMM:TIGR03354.1
type VI secretion system-associated FHA domain protein TagH
COORDINATES: protein motif:HMM:NF012298.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017052878.1
organoarsenical effux MFS transporter ArsJ
COORDINATES: similar to AA sequence:RefSeq:WP_013868025.1
COORDINATES: similar to AA sequence:RefSeq:WP_016799321.1
ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_017024296.1
COORDINATES: similar to AA sequence:RefSeq:WP_004402533.1
COORDINATES: similar to AA sequence:RefSeq:WP_016960405.1
COORDINATES: similar to AA sequence:RefSeq:WP_016960404.1
COORDINATES: similar to AA sequence:RefSeq:WP_004401242.1
COORDINATES: similar to AA sequence:RefSeq:WP_002539004.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017006315.1
COORDINATES: similar to AA sequence:RefSeq:WP_002538998.1
COORDINATES: similar to AA sequence:RefSeq:WP_004413583.1
COORDINATES: similar to AA sequence:RefSeq:WP_005427940.1
GO:0044874 - lipoprotein localization to outer membrane [Evidence IEA]; GO:0042953 - lipoprotein transport [Evidence IEA]
outer membrane lipoprotein-sorting protein
COORDINATES: similar to AA sequence:RefSeq:WP_017421081.1
COORDINATES: similar to AA sequence:RefSeq:WP_011080232.1
COORDINATES: similar to AA sequence:RefSeq:WP_011261294.1
COORDINATES: similar to AA sequence:RefSeq:WP_007464003.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018389.2
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_002537097.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
RNA repair transcriptional activator RtcR
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_017013616.1
COORDINATES: similar to AA sequence:RefSeq:WP_017011052.1
GO:0008452 - RNA ligase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF003246.0
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017024886.1
COORDINATES: similar to AA sequence:RefSeq:WP_019829469.1
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016786191.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006229223.1
COORDINATES: similar to AA sequence:RefSeq:WP_017422605.1
COORDINATES: protein motif:HMM:NF012931.2
COORDINATES: similar to AA sequence:RefSeq:WP_017003806.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024978.2
COORDINATES: similar to AA sequence:RefSeq:WP_011220770.1
COORDINATES: similar to AA sequence:RefSeq:WP_000780722.1
COORDINATES: similar to AA sequence:RefSeq:WP_000565049.1
COORDINATES: similar to AA sequence:RefSeq:WP_017419585.1
COORDINATES: similar to AA sequence:RefSeq:WP_009705119.1
COORDINATES: protein motif:HMM:NF007812.0
homoserine/homoserine lactone efflux protein
COORDINATES: similar to AA sequence:RefSeq:WP_006074249.1
COORDINATES: similar to AA sequence:RefSeq:WP_004398899.1
COORDINATES: similar to AA sequence:RefSeq:WP_019820093.1
COORDINATES: similar to AA sequence:RefSeq:WP_010450557.1
COORDINATES: similar to AA sequence:RefSeq:WP_005423243.1
COORDINATES: similar to AA sequence:RefSeq:WP_008986322.1
COORDINATES: similar to AA sequence:RefSeq:WP_020334140.1
COORDINATES: similar to AA sequence:RefSeq:WP_017022588.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005423883.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: similar to AA sequence:RefSeq:WP_004412171.1
COORDINATES: similar to AA sequence:RefSeq:WP_017052280.1
COORDINATES: similar to AA sequence:RefSeq:WP_011220612.1
COORDINATES: similar to AA sequence:RefSeq:WP_007463839.1
COORDINATES: similar to AA sequence:RefSeq:WP_012552064.1
COORDINATES: similar to AA sequence:RefSeq:WP_017111228.1
COORDINATES: similar to AA sequence:RefSeq:WP_005469198.1
COORDINATES: similar to AA sequence:RefSeq:WP_004412754.1
COORDINATES: similar to AA sequence:RefSeq:WP_012600049.1
GO:0047420 - N-acyl-D-amino-acid deacylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019824551.1
COORDINATES: similar to AA sequence:RefSeq:WP_004732501.1
COORDINATES: similar to AA sequence:RefSeq:WP_004408589.1
GO:0008725 - DNA-3-methyladenine glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017023870.1
COORDINATES: similar to AA sequence:RefSeq:WP_010431359.1
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004396746.1
COORDINATES: similar to AA sequence:RefSeq:WP_004396728.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF012428.2
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF006074.0
GO:0008667 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity [Evidence IEA]
GO:0019290 - siderophore biosynthetic process [Evidence IEA]
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014204789.1
COORDINATES: similar to AA sequence:RefSeq:WP_011221822.1
COORDINATES: similar to AA sequence:RefSeq:WP_011081752.1
GO:0008909 - isochorismate synthase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004404814.1
COORDINATES: similar to AA sequence:RefSeq:WP_002539053.1
COORDINATES: similar to AA sequence:RefSeq:WP_004404104.1
ethylbenzene dehydrogenase-related protein
COORDINATES: protein motif:HMM:NF008296.0
two-component system response regulator CreB
COORDINATES: protein motif:HMM:NF008312.0
GO:0016310 - phosphorylation [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
two-component system sensor histidine kinase CreC
COORDINATES: protein motif:HMM:NF008712.1
COORDINATES: similar to AA sequence:RefSeq:WP_011221879.1
COORDINATES: similar to AA sequence:RefSeq:WP_017631254.1
COORDINATES: similar to AA sequence:RefSeq:WP_017003773.1
COORDINATES: protein motif:HMM:NF016382.2
GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012600760.1
COORDINATES: similar to AA sequence:RefSeq:WP_017104461.1
COORDINATES: similar to AA sequence:RefSeq:WP_007466850.1
COORDINATES: protein motif:HMM:TIGR00400.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007466078.1
COORDINATES: similar to AA sequence:RefSeq:WP_017004557.1
COORDINATES: similar to AA sequence:RefSeq:WP_011218787.1
COORDINATES: similar to AA sequence:RefSeq:WP_005305252.1
COORDINATES: similar to AA sequence:RefSeq:WP_005504594.1
COORDINATES: protein motif:HMM:NF021606.2
COORDINATES: similar to AA sequence:RefSeq:WP_004398378.1
COORDINATES: similar to AA sequence:RefSeq:WP_004411685.1
COORDINATES: similar to AA sequence:RefSeq:WP_002540458.1
COORDINATES: similar to AA sequence:RefSeq:WP_001919248.1
COORDINATES: protein motif:HMM:NF025471.2
COORDINATES: similar to AA sequence:RefSeq:WP_016791914.1
COORDINATES: similar to AA sequence:RefSeq:WP_007463431.1
GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006229996.1
COORDINATES: protein motif:HMM:NF037461.2
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: protein motif:HMM:NF025119.2
COORDINATES: protein motif:HMM:TIGR04085.1
COORDINATES: similar to AA sequence:RefSeq:WP_005469221.1
COORDINATES: similar to AA sequence:RefSeq:WP_017447313.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017019721.1
COORDINATES: similar to AA sequence:RefSeq:WP_004412963.1
COORDINATES: similar to AA sequence:RefSeq:WP_017421746.1
COORDINATES: similar to AA sequence:RefSeq:WP_017052762.1
COORDINATES: similar to AA sequence:RefSeq:WP_000090070.1
ClbS/DfsB family four-helix bundle protein
COORDINATES: similar to AA sequence:RefSeq:WP_017098631.1
COORDINATES: similar to AA sequence:RefSeq:WP_017098630.1
COORDINATES: protein motif:HMM:NF014026.2
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019820023.1
COORDINATES: similar to AA sequence:RefSeq:WP_005434040.1
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008222130.1
COORDINATES: similar to AA sequence:RefSeq:WP_017188125.1
COORDINATES: similar to AA sequence:RefSeq:WP_017188126.1
COORDINATES: similar to AA sequence:RefSeq:WP_008222124.1
COORDINATES: similar to AA sequence:RefSeq:WP_005433808.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017188129.1
COORDINATES: similar to AA sequence:RefSeq:WP_017092511.1
COORDINATES: similar to AA sequence:RefSeq:WP_019820024.1
COORDINATES: similar to AA sequence:RefSeq:WP_008215599.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: similar to AA sequence:RefSeq:WP_017028240.1
COORDINATES: similar to AA sequence:RefSeq:WP_020432604.1
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_005364173.1
COORDINATES: similar to AA sequence:RefSeq:WP_017017930.1
COORDINATES: protein motif:HMM:NF025674.2
COORDINATES: similar to AA sequence:RefSeq:WP_017017932.1
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: similar to AA sequence:RefSeq:WP_006229783.1
COORDINATES: similar to AA sequence:RefSeq:WP_004413480.1
COORDINATES: similar to AA sequence:RefSeq:WP_002540704.1
COORDINATES: similar to AA sequence:RefSeq:WP_017022609.1
COORDINATES: similar to AA sequence:RefSeq:WP_005447383.1
COORDINATES: similar to AA sequence:RefSeq:WP_004400427.1
COORDINATES: similar to AA sequence:RefSeq:WP_016960337.1
COORDINATES: similar to AA sequence:RefSeq:WP_017015231.1
COORDINATES: similar to AA sequence:RefSeq:WP_017010355.1
COORDINATES: similar to AA sequence:RefSeq:WP_011151800.1
COORDINATES: similar to AA sequence:RefSeq:WP_000034190.1
COORDINATES: protein motif:HMM:NF019974.2
COORDINATES: similar to AA sequence:RefSeq:WP_007466251.1
GO:0042619 - poly-hydroxybutyrate biosynthetic process [Evidence IEA]
class I poly(R)-hydroxyalkanoic acid synthase
COORDINATES: similar to AA sequence:RefSeq:WP_009841020.1
COORDINATES: similar to AA sequence:RefSeq:WP_005364181.1
COORDINATES: similar to AA sequence:RefSeq:WP_005364179.1
COORDINATES: similar to AA sequence:RefSeq:WP_008216394.1
GO:0003920 - GMP reductase activity [Evidence IEA]
GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017019953.1
COORDINATES: similar to AA sequence:RefSeq:WP_002538201.1
COORDINATES: similar to AA sequence:RefSeq:WP_019275850.1
COORDINATES: similar to AA sequence:RefSeq:WP_017014982.1
COORDINATES: similar to AA sequence:RefSeq:WP_017109872.1
COORDINATES: similar to AA sequence:RefSeq:WP_012535376.1
COORDINATES: similar to AA sequence:RefSeq:WP_006229668.1
COORDINATES: similar to AA sequence:RefSeq:WP_011082324.1
COORDINATES: similar to AA sequence:RefSeq:WP_019275836.1
COORDINATES: similar to AA sequence:RefSeq:WP_017010949.1
COORDINATES: similar to AA sequence:RefSeq:WP_005505626.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002540279.1
COORDINATES: similar to AA sequence:RefSeq:WP_011219408.1
COORDINATES: similar to AA sequence:RefSeq:WP_013572235.1
COORDINATES: similar to AA sequence:RefSeq:WP_006229274.1
COORDINATES: similar to AA sequence:RefSeq:WP_004736928.1
COORDINATES: similar to AA sequence:RefSeq:WP_005394877.1
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_009706350.1
COORDINATES: similar to AA sequence:RefSeq:WP_020334419.1
COORDINATES: similar to AA sequence:RefSeq:WP_017035636.1
COORDINATES: similar to AA sequence:RefSeq:WP_017035637.1
COORDINATES: similar to AA sequence:RefSeq:WP_017018957.1
COORDINATES: similar to AA sequence:RefSeq:WP_020329713.1
COORDINATES: similar to AA sequence:RefSeq:WP_020329714.1
COORDINATES: similar to AA sequence:RefSeq:WP_002540287.1
COORDINATES: similar to AA sequence:RefSeq:WP_004745524.1
COORDINATES: similar to AA sequence:RefSeq:WP_017025433.1
COORDINATES: similar to AA sequence:RefSeq:WP_017067472.1
COORDINATES: similar to AA sequence:RefSeq:WP_006071353.1
COORDINATES: similar to AA sequence:RefSeq:WP_004733797.1
COORDINATES: similar to AA sequence:RefSeq:WP_017059591.1
proline/glycine betaine ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_017052366.1
glycine betaine/L-proline ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013571552.1
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_006645193.1
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_004397992.1
COORDINATES: similar to AA sequence:RefSeq:WP_012534921.1
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: similar to AA sequence:RefSeq:WP_017006200.1
COORDINATES: similar to AA sequence:RefSeq:WP_017034942.1
COORDINATES: similar to AA sequence:RefSeq:WP_017790203.1
COORDINATES: similar to AA sequence:RefSeq:WP_016958099.1
COORDINATES: similar to AA sequence:RefSeq:WP_010646947.1
COORDINATES: protein motif:HMM:NF018408.2
COORDINATES: similar to AA sequence:RefSeq:WP_004745664.1
COORDINATES: similar to AA sequence:RefSeq:WP_000151010.1
DNA-binding transcriptional regulator KdgR
COORDINATES: similar to AA sequence:RefSeq:WP_020334993.1
COORDINATES: similar to AA sequence:RefSeq:WP_015313576.1
COORDINATES: similar to AA sequence:RefSeq:WP_017189600.1
COORDINATES: protein motif:HMM:NF021534.2
COORDINATES: similar to AA sequence:RefSeq:WP_014235058.1
COORDINATES: similar to AA sequence:RefSeq:WP_000213774.1
COORDINATES: similar to AA sequence:RefSeq:WP_011082001.1
COORDINATES: similar to AA sequence:RefSeq:WP_011152824.1
COORDINATES: similar to AA sequence:RefSeq:WP_005482282.1
COORDINATES: similar to AA sequence:RefSeq:WP_020335215.1
galactose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015728432.1
COORDINATES: similar to AA sequence:RefSeq:WP_020333530.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0050500 - 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
COORDINATES: protein motif:HMM:NF015827.2
COORDINATES: protein motif:HMM:NF015368.2
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: similar to AA sequence:RefSeq:WP_010449999.1
COORDINATES: similar to AA sequence:RefSeq:WP_008074025.1
COORDINATES: similar to AA sequence:RefSeq:WP_017054822.1
tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY
COORDINATES: similar to AA sequence:RefSeq:WP_019275106.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_017447386.1
COORDINATES: similar to AA sequence:RefSeq:WP_004403316.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028763.1
COORDINATES: similar to AA sequence:RefSeq:WP_005370451.1
COORDINATES: similar to AA sequence:RefSeq:WP_006961194.1
GO:0008720 - D-lactate dehydrogenase activity [Evidence IEA]; GO:0070404 - NADH binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004739492.1
COORDINATES: similar to AA sequence:RefSeq:WP_004727256.1
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005304227.1
COORDINATES: similar to AA sequence:RefSeq:WP_007461546.1
COORDINATES: protein motif:HMM:NF015729.2
COORDINATES: similar to AA sequence:RefSeq:WP_019827778.1
anaerobic C4-dicarboxylate transporter DcuC
COORDINATES: similar to AA sequence:RefSeq:WP_002541319.1
COORDINATES: similar to AA sequence:RefSeq:WP_019280769.1
COORDINATES: similar to AA sequence:RefSeq:WP_008224203.1
COORDINATES: protein motif:HMM:NF012382.2
COORDINATES: similar to AA sequence:RefSeq:WP_017821066.1
COORDINATES: protein motif:HMM:NF013427.2
COORDINATES: similar to AA sequence:RefSeq:WP_017040567.1
COORDINATES: protein motif:HMM:NF018352.2
COORDINATES: similar to AA sequence:RefSeq:WP_017020264.1
COORDINATES: similar to AA sequence:RefSeq:WP_020335973.1
COORDINATES: protein motif:HMM:NF016818.2
COORDINATES: similar to AA sequence:RefSeq:WP_017050349.1
COORDINATES: protein motif:HMM:NF016535.2
COORDINATES: similar to AA sequence:RefSeq:WP_017050351.1
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_016797861.1
COORDINATES: similar to AA sequence:RefSeq:WP_004732350.1
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: similar to AA sequence:RefSeq:WP_002538149.1
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: similar to AA sequence:RefSeq:WP_004409415.1
COORDINATES: similar to AA sequence:RefSeq:WP_004411168.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: similar to AA sequence:RefSeq:WP_004742518.1
COORDINATES: similar to AA sequence:RefSeq:WP_004742517.1
COORDINATES: similar to AA sequence:RefSeq:WP_004742516.1
GO:0046914 - transition metal ion binding [Evidence IEA]
GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004742515.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024081.2
FeoB-associated Cys-rich membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_005376524.1
COORDINATES: protein motif:HMM:NF025444.2
COORDINATES: similar to AA sequence:RefSeq:WP_006230307.1
COORDINATES: similar to AA sequence:RefSeq:WP_015728387.1
COORDINATES: similar to AA sequence:RefSeq:WP_005477736.1
NERD domain-containing protein kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006229168.1
COORDINATES: similar to AA sequence:RefSeq:WP_017006494.1
COORDINATES: similar to AA sequence:RefSeq:WP_017017223.1
COORDINATES: similar to AA sequence:RefSeq:WP_004727543.1
COORDINATES: similar to AA sequence:RefSeq:WP_001284493.1
COORDINATES: similar to AA sequence:RefSeq:WP_005517835.1
COORDINATES: similar to AA sequence:RefSeq:WP_017085672.1
COORDINATES: protein motif:HMM:NF018642.2
COORDINATES: protein motif:HMM:NF014573.2
GO:0010181 - FMN binding [Evidence IEA]; GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]; GO:0008753 - NADPH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017012005.1
isocitrate lyase/phosphoenolpyruvate mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006878975.1
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: similar to AA sequence:RefSeq:WP_017071609.1
COORDINATES: similar to AA sequence:RefSeq:WP_017040208.1
COORDINATES: similar to AA sequence:RefSeq:WP_011221833.1
COORDINATES: similar to AA sequence:RefSeq:WP_007466282.1
COORDINATES: protein motif:HMM:NF024973.2
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017791304.1
COORDINATES: protein motif:HMM:NF012885.2
COORDINATES: protein motif:HMM:NF013989.2
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013661.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042834 - peptidoglycan binding [Evidence IEA]
peptidoglycan recognition family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009704889.1
COORDINATES: similar to AA sequence:RefSeq:WP_002542475.1
COORDINATES: similar to AA sequence:RefSeq:WP_010450683.1
GO:0003904 - deoxyribodipyrimidine photo-lyase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005471272.1
COORDINATES: similar to AA sequence:RefSeq:WP_011218908.1
GO:0016901 - oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor [Evidence IEA]
GO:0006089 - lactate metabolic process [Evidence IEA]; GO:0019516 - lactate oxidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008075910.1
COORDINATES: protein motif:HMM:NF015069.2
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: protein motif:HMM:NF013053.2
GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004741263.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002021425.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017033557.1
UvrY/SirA/GacA family response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_006646740.1
COORDINATES: similar to AA sequence:RefSeq:WP_017034295.1
COORDINATES: similar to AA sequence:RefSeq:WP_017016637.1
COORDINATES: protein motif:HMM:NF012722.2
COORDINATES: protein motif:HMM:NF013179.2
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: similar to AA sequence:RefSeq:WP_004398340.1
COORDINATES: similar to AA sequence:RefSeq:WP_017079591.1
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_005439159.1
COORDINATES: similar to AA sequence:RefSeq:WP_020196345.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012905035.1
COORDINATES: similar to AA sequence:RefSeq:WP_009841250.1
COORDINATES: similar to AA sequence:RefSeq:WP_005363338.1
GO:0016020 - membrane [Evidence IEA]; GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
monofunctional biosynthetic peptidoglycan transglycosylase
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017052801.1
COORDINATES: similar to AA sequence:RefSeq:WP_006881118.1
COORDINATES: similar to AA sequence:RefSeq:WP_016959903.1
COORDINATES: similar to AA sequence:RefSeq:WP_007469674.1
GO:0032329 - serine transport [Evidence IEA]; GO:0015826 - threonine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006960209.1
GO:0005298 - proline:sodium symporter activity [Evidence IEA]
GO:0015824 - proline transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009385965.1
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0004657 - proline dehydrogenase activity [Evidence IEA]
GO:0010133 - proline catabolic process to glutamate [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
COORDINATES: similar to AA sequence:RefSeq:WP_007463245.1
COORDINATES: similar to AA sequence:RefSeq:WP_011263950.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007463256.1
COORDINATES: similar to AA sequence:RefSeq:WP_007463258.1
COORDINATES: similar to AA sequence:RefSeq:WP_004408149.1
COORDINATES: similar to AA sequence:RefSeq:WP_005378354.1
COORDINATES: protein motif:HMM:NF015894.2
COORDINATES: protein motif:HMM:NF016982.2
COORDINATES: similar to AA sequence:RefSeq:WP_008988569.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_017028430.1