Vibrio aphrogenes strain CA-1004 chromosome 1, complete sequence.
type: Entry
definition: Vibrio aphrogenes strain CA-1004 chromosome 1, complete sequence.
sequence version: NZ_AP018689.1
sequence date: 2022-12-25
sequence: sequence
division: CON
label: NZ_AP018689.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00057777
keyword: RefSeq
source: Vibrio aphrogenes
organism: Vibrio aphrogenes
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP018689.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.2\nGenome Coverage :: 549x\nSequencing Technology :: Illumina MiSeq; ONT MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/25/2022 03:48:14\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,032\nCDSs (total) :: 2,913\nGenes (coding) :: 2,899\nCDSs (with protein) :: 2,899\nGenes (RNA) :: 119\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 93\nncRNAs :: 4\nPseudo Genes (total) :: 14\nCDSs (without protein) :: 14\nPseudo Genes (ambiguous residues) :: 0 of 14\nPseudo Genes (frameshifted) :: 3 of 14\nPseudo Genes (incomplete) :: 12 of 14\nPseudo Genes (internal stop) :: 3 of 14\nPseudo Genes (multiple problems) :: 4 of 14\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 2494640
topology: circular
so has quality: SO_0000988
location: 1..2494640
location: region:1-2494640:1
RO_0002162: 1891186

NZ_AP018689
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00057777
type: BioSample
SIO_000068: biosample

1
title: Vibrio aphrogenes whole genome sequence
author: Sawabe, T.
journal: Unpublished

2
title: Direct Submission
author: Sawabe, T.
author: Mino, S.
journal: Submitted (18-MAY-2018) Contact:Tomoo Sawabe Hokkaido University, Faculty of Fisheries Sciences; 3-1-1 Minato-cho, Hakodate, Hokkaido 041-8611, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2494640:1
position: 2494640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2494640:1:source
so part of: sequence
organism: Vibrio aphrogenes
mol type: genomic DNA
strain: CA-1004
culture collection: JCM:31643
type material: type strain of Vibrio aphrogenes
chromosome: 1

1891186
type: Taxonomy
SIO_000068: taxonomy

VCA1004_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: mioC
locus tag: VCA1004_RS00005
so part of: sequence
location: complement(518..958)
location: region:518-958:-1
so has part: feature:518-958:-1:exon
subclass of: SO_0000010

position:518:-1
position: 518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958:-1
position: 958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518-958:-1:exon

VCA1004_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: mioC
locus tag: VCA1004_RS00005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024260.1
GO function: GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FMN-binding protein MioC
translation: MIHIITGSTLGGAEYVGDHLSDLLIAQGLETTIHNQPDLADIDPSGIWLIVTSTHGAGDYPDNIQPFMHGLKSTPPRMSEVKFAVIAIGDSSYDTFCGAGRQARETLLDIGATELCQHLEIDVISTPVPEEPAEAWLDEHISAFLN
SIO_010081: VCA1004_RS00005
subclass of: SO_0000673
so part of: VCA1004_RS00005
location: complement(518..958)
location: region:518-958:-1
so has part: feature:518-958:-1:exon

WP_086981846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518-958:-1:exon

VCA1004_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: mnmE
locus tag: VCA1004_RS00010
so part of: sequence
location: complement(988..2349)
location: region:988-2349:-1
so has part: feature:988-2349:-1:exon
subclass of: SO_0000010

position:988:-1
position: 988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2349:-1
position: 2349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988-2349:-1:exon

VCA1004_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: mnmE
locus tag: VCA1004_RS00010
EC number: 3.6.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005476209.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
translation: MNTETIVAQATALGRGGVGIIRVSGPKATHVALEVLGREIKPRYAEYLAFKDEHGQQLDQGIALYFPNPNSFTGEDVLELQGHGGPIVMDMLIKRILKIDGIRAARPGEFSERAFLNDKIDLTQAEAIADLIDASSEEAAKSALNSLQGEFSQRINNLVESLIHLRIYVEAAIDFPEEEIDFLADGKVSADLQTIIDNLALVRKEANQGALIREGMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVEKIGIERAWEEIEQADRVLFMVDGTTTDATDPKEIWPDFVERLPQNIGMTVIRNKADQTNEQLGICHANNPTLIRLSAKTGEGVESLREHLKECMGFAGGSEGRFMARRRHLEALDNAAQHLEIGQQQLEGYMAGEILAEELRITQQHLSEITGEFSSDDLLGRIFSSFCIGK
SIO_010081: VCA1004_RS00010
subclass of: SO_0000673
so part of: VCA1004_RS00010
location: complement(988..2349)
location: region:988-2349:-1
so has part: feature:988-2349:-1:exon

WP_086981847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:988-2349:-1:exon

VCA1004_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: yidC
locus tag: VCA1004_RS00015
so part of: sequence
location: complement(2475..4124)
location: region:2475-4124:-1
so has part: feature:2475-4124:-1:exon
subclass of: SO_0000010

position:2475:-1
position: 2475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4124:-1
position: 4124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2475-4124:-1:exon

VCA1004_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: yidC
locus tag: VCA1004_RS00015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024262.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0032977 - membrane insertase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein insertase YidC
translation: MDSQRNILLIAFALVSFLLFQQWSNKDAQPAQTSVQQTQTHTDSSLPHDPAEASADPLAPQQVKNKPAQTTITVKTDVLTLAINPVGGDVVSAKLNQYNATLDSKDSFVLLKESPEHEYIAQSGLVGPQGIDVSTTNRPTYHAAATSYQLADGQDELRIPLTYSANGIEYTKTFIVKRNNYAIDVVYDINNQSGQDATLGMYAHLRQTMVEGNGHIGMPVYTGGAFSTSETRYEKYKFDDMKDKNLNKTLADGQGWVGMLQHYFASAWIPRDQPGTIIYSRVIGNIADIGVRTPNQVIANGQNSEIKATLWAGPKLQDQMAATAPHLDLVVDYGWLWFIAKPLHSLLSFLHSHISSNWGIAIILLTFIVRGAMYPLTKAQYTSMAKMRMLQPKIVAMKERLGDDRQRVSQEMMAMYKEEKVNPLGGCFPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYYILPVLMGISMLIIQKMSPTTITDPMQQKMMMFMPVIFIFFFLWFPSGLVLYYLMSNIVTLVQQTLIYRALEKKGLHSKKK
SIO_010081: VCA1004_RS00015
subclass of: SO_0000673
so part of: VCA1004_RS00015
location: complement(2475..4124)
location: region:2475-4124:-1
so has part: feature:2475-4124:-1:exon

WP_086981848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2475-4124:-1:exon

VCA1004_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: yidD
locus tag: VCA1004_RS00020
so part of: sequence
location: complement(4127..4384)
location: region:4127-4384:-1
so has part: feature:4127-4384:-1:exon
subclass of: SO_0000010

position:4127:-1
position: 4127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4384:-1
position: 4384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4127-4384:-1:exon

VCA1004_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: yidD
locus tag: VCA1004_RS00020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004739274.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein insertion efficiency factor YidD
translation: MATPISPLSWLAIRLIYLYKGMISPLIGPRCRFTPTCSTYAIEAIKEHGFVKGCWLSGKRLLKCHPLNAGGYDPVPPKQKHDRDK
SIO_010081: VCA1004_RS00020
subclass of: SO_0000673
so part of: VCA1004_RS00020
location: complement(4127..4384)
location: region:4127-4384:-1
so has part: feature:4127-4384:-1:exon

WP_086981849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4127-4384:-1:exon

VCA1004_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rnpA
locus tag: VCA1004_RS00025
so part of: sequence
location: complement(4351..4674)
location: region:4351-4674:-1
so has part: feature:4351-4674:-1:exon
subclass of: SO_0000010

position:4351:-1
position: 4351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4674:-1
position: 4674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4351-4674:-1:exon

VCA1004_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rnpA
locus tag: VCA1004_RS00025
EC number: 3.1.26.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006957457.1
GO function: GO:0004526 - ribonuclease P activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease P protein component
translation: MLTPEHYQNVFQQAHRAGSPHFTIIARNNTLSHPRLGLAVPKKQIKTAVGRNRFKRLARESFRLKQHQLPNKDFVVIAKKSAQDLSNDEIFNLFEKLWQRLSRPYRG
SIO_010081: VCA1004_RS00025
subclass of: SO_0000673
so part of: VCA1004_RS00025
location: complement(4351..4674)
location: region:4351-4674:-1
so has part: feature:4351-4674:-1:exon

WP_232012653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4351-4674:-1:exon

VCA1004_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpmH
locus tag: VCA1004_RS00030
so part of: sequence
location: complement(4720..4854)
location: region:4720-4854:-1
so has part: feature:4720-4854:-1:exon
subclass of: SO_0000010

position:4720:-1
position: 4720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4854:-1
position: 4854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4720-4854:-1:exon

VCA1004_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpmH
locus tag: VCA1004_RS00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005378825.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L34
translation: MKRTFQPTVLKRKRTHGFRARMATKNGRKVINARRAKGRKRLSK
SIO_010081: VCA1004_RS00030
subclass of: SO_0000673
so part of: VCA1004_RS00030
location: complement(4720..4854)
location: region:4720-4854:-1
so has part: feature:4720-4854:-1:exon

WP_021707029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4720-4854:-1:exon

VCA1004_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00035
so part of: sequence
location: complement(5076..5813)
location: region:5076-5813:-1
so has part: feature:5076-5813:-1:exon
subclass of: SO_0000010

position:5076:-1
position: 5076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5813:-1
position: 5813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5076-5813:-1:exon

VCA1004_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019829580.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter ATP-binding protein
translation: MIKISNLHKTFGDTEVLKGVDIEIKKGEIIVIIGSSGTGKSTLLRCVNFLESPEQGIIEIEGTRVDSQHHSKADKLALRRKTGFVFQNYALFAHLTARQNIAEGLITVRGWKKADALAHAQKILDDIGLGDKGDSYPASLSGGQQQRVGIGRAMAFKPELLLFDEPTSALDPEWVGEVLSLMKQLAKQHQTMLVVTHEMQFAREVADRVIYMANGKIVEQGTPDQIFKDPTNPQLIKFLNQVGIQ
SIO_010081: VCA1004_RS00035
subclass of: SO_0000673
so part of: VCA1004_RS00035
location: complement(5076..5813)
location: region:5076-5813:-1
so has part: feature:5076-5813:-1:exon

WP_086981851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5076-5813:-1:exon

VCA1004_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00040
so part of: sequence
location: complement(5810..6481)
location: region:5810-6481:-1
so has part: feature:5810-6481:-1:exon
subclass of: SO_0000010

position:5810:-1
position: 5810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6481:-1
position: 6481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5810-6481:-1:exon

VCA1004_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011079037.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MKFDLNYMLELLPILFRYLGTTLQMAIWGMIFALILSVVIANIRVFKVPVLNQLSQLYISFFRGTPLLVQLFLLYYGLPQIFPIFVGMDAFTAAIIGLTLHFASYMAESIRAAIIGIDRSQMEASISIGMTSSQSMRRIILPQAARVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVLILTRVQTWAETKFNKAYQR
SIO_010081: VCA1004_RS00040
subclass of: SO_0000673
so part of: VCA1004_RS00040
location: complement(5810..6481)
location: region:5810-6481:-1
so has part: feature:5810-6481:-1:exon

WP_086981852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5810-6481:-1:exon

VCA1004_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00045
so part of: sequence
location: complement(6478..8229)
location: region:6478-8229:-1
so has part: feature:6478-8229:-1:exon
subclass of: SO_0000010

position:6478:-1
position: 6478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8229:-1
position: 8229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6478-8229:-1:exon

VCA1004_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024267.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein/permease
translation: MVLRLTSSHFLGKVWQLSKPYWQSDEKWLARGLLIAIVILNLGMVYMSVILNQWNSDFYNALQDLDKQAFTHLIIKFSLIAAIFIIIAVYRIYLNMMLQLRWRRWLTHAYFSEWLTDRSYFQLERGQHKTDNPDQRIAQDIDQFTADTLNLSLGLLNSVVTLISFITILWGLSSPLSIHFAGQNLTIPGFMVWAALLYALVGSYIMHKIGKPLIGLNFMQQKFEANFRYSLIRLRDNAEGVALYQGESKERELLESRFIDVWKNTWQIMRKQKQIVGFNSGYNQIAIIFPILIAAPSFFSGAIKLGGLMQVNNAFSQVMGAVSWFVDSYASIASWKASVDRLTTYNQDMFNTKQQVQHSHLNVIAHNKDYLHIHHCQLKLPDGTELSSLKALTLPAGQHTLISGQSGIGKSTLMKTIAGIWPFSDATIELAQSRLFLPQKAYLPAGSLREVLCYPNTEMKIADHEIQDLLQQCRLEHFSQQLDEVKSWSHTMSPGEQQRVAIVRALILKPKWLFLDEATSSLDEETESNLYQLLKEQLPNTTLVSIAHRSNVARFHHYHLHARRTDKQIDWRLSPIEGNSLYS
SIO_010081: VCA1004_RS00045
subclass of: SO_0000673
so part of: VCA1004_RS00045
location: complement(6478..8229)
location: region:6478-8229:-1
so has part: feature:6478-8229:-1:exon

WP_086981853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6478-8229:-1:exon

VCA1004_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00050
so part of: sequence
location: complement(8516..9277)
location: region:8516-9277:-1
so has part: feature:8516-9277:-1:exon
subclass of: SO_0000010

position:8516:-1
position: 8516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9277:-1
position: 9277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8516-9277:-1:exon

VCA1004_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024269.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter substrate-binding protein
translation: MNRTINKLITAAALFFSITTFAQAANQEVKVGMSGTYFPFTFQKLDKLQGFEVDLWNEIGKRNHYDIKFVTANFSGLFGLLETGRVDTISNQVSITEARKAKYLFSQPYVIDGVQITVRKGNDSIKGIDDLAGKTVAVNLGSNFEQVLRSYDKEGKINIKTYDAGIEQDVALGRSDAFVMDRLSAIQIIKKANLPLQLAGEPFETIENAWPFVNNEKGKKLQSEVNTALDAMRQDGTLATISEKWFGADITKK
SIO_010081: VCA1004_RS00050
subclass of: SO_0000673
so part of: VCA1004_RS00050
location: complement(8516..9277)
location: region:8516-9277:-1
so has part: feature:8516-9277:-1:exon

WP_086981854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8516-9277:-1:exon

VCA1004_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: dnaA
locus tag: VCA1004_RS00055
so part of: sequence
location: 9606..11021
location: region:9606-11021:1
so has part: feature:9606-11021:1:exon
subclass of: SO_0000010

position:9606:1
position: 9606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11021:1
position: 11021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9606-11021:1:exon

VCA1004_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: dnaA
locus tag: VCA1004_RS00055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005416782.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MSSSLWLQCLQQLQEELPATEFSMWVRPLQAELNDNTLTLFAPNRFVLDWVRDKYLNSINRLLKEFCGSDTPNLHFEVGSKPTQSVVEPPRRTAADVAAESSAPAQLQKSRPANKSWDSNTPNRESIVDINHRSNVNPKHKFHNFVEGKSNQLGLAAAKQVSDNPGVSYNPLFLYGGTGLGKTHLLHAVGNAIVESKPDARVVYMHSERFVQDMVKALQNNAIEEFKNYYRSLDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKAEDHQITLADEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQLAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRKIKELREESHDIKEDYSNLIRTLSS
SIO_010081: VCA1004_RS00055
subclass of: SO_0000673
so part of: VCA1004_RS00055
location: 9606..11021
location: region:9606-11021:1
so has part: feature:9606-11021:1:exon

WP_232012602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9606-11021:1:exon

VCA1004_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: dnaN
locus tag: VCA1004_RS00060
so part of: sequence
location: 11085..12185
location: region:11085-12185:1
so has part: feature:11085-12185:1:exon
subclass of: SO_0000010

position:11085:1
position: 11085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12185:1
position: 12185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11085-12185:1:exon

VCA1004_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: dnaN
locus tag: VCA1004_RS00060
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020430388.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKFTIERTQLIKPLQQVSGALGGRSSLPILGNLLIKVDNGELSITATDLEVELVCRLELDGHFEPGSTTVPSRKFLDICRGLPDSAAIDVTLDEERLLIKSGRSRFSLATLPAADFPNIEDWQSEAEVTVTQGELRQLVEKTQFSMANQDVRYYLNGMLFEIEGTCLRSVATDGHRMAVAETALVGEYPQQQVIVPRKGVLELIKLLDRPDEQVTLQIGQSNIRANVNQFTFTSKLVDGRFPDYRRVMPQHTTKTLEADCESLRQSFSRAAILSNEKFRGVRVNLAGSEMRITANNPEQEEAEENLDVNYQGEPLEIGFNVSYVLDILNTLKCNTVRMSMSDANASALVENTEDTSSMYVVMPIRL
SIO_010081: VCA1004_RS00060
subclass of: SO_0000673
so part of: VCA1004_RS00060
location: 11085..12185
location: region:11085-12185:1
so has part: feature:11085-12185:1:exon

WP_086981856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11085-12185:1:exon

VCA1004_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: recF
locus tag: VCA1004_RS00065
so part of: sequence
location: 12186..13265
location: region:12186-13265:1
so has part: feature:12186-13265:1:exon
subclass of: SO_0000010

position:12186:1
position: 12186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13265:1
position: 13265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12186-13265:1:exon

VCA1004_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: recF
locus tag: VCA1004_RS00065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010433158.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication/repair protein RecF
translation: MPLTRLSIQQFRNIKACDLSLSPGFNFLVGPNGSGKTSVLEAIYLLGHGRSFKSTLTGRVIQNDESELFVHGRFLSQDNYELPIGINKQRDGSSEVKIGGQGGQKIAQLAQILPLQLIHTEGFELLTEGPKFRRSFIDWGVFHTQANFYDKWARLKRLIKQRNALLKTATRYHELSFWDKELAQLAEMISQWRSDYVLQLKQEAEQICRVFLPEFEVKIQYYRGWDKDTPYADILQKNFERDQQLGYTFSGPNKADLKLKINATPVEDVLSRGQLKLMVCALRLAQGQHLTQTTGKQCIYLIDDFASELDSQRRGRLAEYLKQTQAQVFVSSITASHIAEMQSENSRMFHVEHGKIEQG
SIO_010081: VCA1004_RS00065
subclass of: SO_0000673
so part of: VCA1004_RS00065
location: 12186..13265
location: region:12186-13265:1
so has part: feature:12186-13265:1:exon

WP_086981857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12186-13265:1:exon

VCA1004_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: gyrB
locus tag: VCA1004_RS00070
so part of: sequence
location: 13284..15722
location: region:13284-15722:1
so has part: feature:13284-15722:1:exon
subclass of: SO_0000010

position:13284:1
position: 13284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15722:1
position: 15722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13284-15722:1:exon

VCA1004_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: gyrB
locus tag: VCA1004_RS00070
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024273.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MSNNNDSANSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSDIIITIHEDNSVSVSDDGRGIPTEMHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEKVEMTIKRQGKVHQQIYCHGVPQAPLAVIGETTETGTRIRFWPSEETFTNIEFHYDVLAKRLRELSFLNSGVSIRLIDEREKDKSDHFMFEGGIRAFVEHLNRNKTPIHQKIFYFDHAREEDGITVEVAMQWNDSFQEGVYCFTNNIPQRDGGTHLAGFRGALTRTLNNFMDKEGYSKKAQASTSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMSEKLSEFLIENPNEAKIVCGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKKGKQEQYIKDEEAMELYQAGLALDNAALYVNTNAPALAGAALEKLVLQYNEGMKLVKRMSRRYPYAMINELTHIPRLTAEMSKDAQQVQAWGQKLVDQLNAKEVGASQYSLEVEKHEELGVSIAKLVVRTHGVMHEYVVSLDLLNSKEYGRLADLSEALDGLIEEGAYVKRGERTQEIASFPEALDWLIKESRRGLSLQRYKGLGEMNPDQLWETTMDPESRRMMQVTIDDAVASDELFTTLMGDQVEPRRKFIEDNALKVANLDV
SIO_010081: VCA1004_RS00070
subclass of: SO_0000673
so part of: VCA1004_RS00070
location: 13284..15722
location: region:13284-15722:1
so has part: feature:13284-15722:1:exon

WP_086981858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13284-15722:1:exon

VCA1004_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00075
so part of: sequence
location: complement(15797..16990)
location: region:15797-16990:-1
so has part: feature:15797-16990:-1:exon
subclass of: SO_0000010

position:15797:-1
position: 15797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16990:-1
position: 16990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15797-16990:-1:exon

VCA1004_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017099507.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISL3 family transposase
translation: MPNHTFLSSFWEGFHIVKSHQTESLITLTLKPSSIAKCPCGLHAQSIHEYQWRNVKEATLLGLPVELLVQTRRVKCRHCGIKTEQLSWLEPYARLTNRLRSYIEQLLPLLPIKHIAQITGVHWHTIKEIDKRRLQHVVPQVKWGELRQLVMDEFAIFKGHRYATVIADAKSHQVIWVGLGRSRKDIRPFFKQLGEHGKNIEAVAMDMNTAFDLEVQEHCPNAHIVYDLFHVVAKFGREVMDRVRVDQANKLKHDKKARQWVKRSRWVLLKNRDNLNTQQDSYLTEILEINKDLMTTYVLGAQLKELWRCESELQVKNLWKVWWEQVNDSGIKPLKEFARKLRPYLHGIIASGSYPLNTCTLEGINNKIKLIKRMGYGYRDTDYFFLKIKAAFPGKPR
SIO_010081: VCA1004_RS00075
subclass of: SO_0000673
so part of: VCA1004_RS00075
location: complement(15797..16990)
location: region:15797-16990:-1
so has part: feature:15797-16990:-1:exon

WP_086981859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15797-16990:-1:exon

VCA1004_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00080
so part of: sequence
location: 17392..17829
location: region:17392-17829:1
so has part: feature:17392-17829:1:exon
subclass of: SO_0000010

position:17392:1
position: 17392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17829:1
position: 17829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17392-17829:1:exon

VCA1004_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005472612.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20 family protein
translation: MRNVDFSPLYRNAIGFDRLLNLMESNNAKNSSGGYPPYNIEKQDENHFRITMAVAGFAEENLDITQHENMLIVRGERQPEEGKNYVYQGIAERDFERKFQLADYVKVLSAGMENGLLHIDLEREIPEAMQPRKIAINGKELLENK
SIO_010081: VCA1004_RS00080
subclass of: SO_0000673
so part of: VCA1004_RS00080
location: 17392..17829
location: region:17392-17829:1
so has part: feature:17392-17829:1:exon

WP_179949218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17392-17829:1:exon

VCA1004_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00085
so part of: sequence
location: complement(17884..18960)
location: region:17884-18960:-1
so has part: feature:17884-18960:-1:exon
subclass of: SO_0000010

position:17884:-1
position: 17884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18960:-1
position: 18960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17884-18960:-1:exon

VCA1004_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00085
inference: COORDINATES: protein motif:HMM:NF025005.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KTSC domain-containing protein
translation: MKFIILFFLLSSLAHANCIDSVDNTNVYYVNGMFTNQKSYNKNMVELQKFVSNHLNVGEVNISSSGSWNPSEPFLEQFKQVALQKFTELNVNQTVQDNIAKTFSGFSVARTSQQSAQETTDVMSAILKEISDTYYQDQTFNHAYHSVTDLLDNCNRVVLIGHSQGNFYTNALLDALYADYRYPDGSTLNDYRMLGYFGFALPTSSVGGYTGTQYPHLMGFVTNDNDIVMAAVRYTIGALPSNYDNDFSLADFTGHSLIVSYLEKYGQANLAASSISHIVSQQYPPPISEQHSSNSSAMSSYGYSYLSQILDIKFKDSSVYRYNYVPSDVFESFEIAESQGAFLNTEIKGIYPYIKLSE
SIO_010081: VCA1004_RS00085
subclass of: SO_0000673
so part of: VCA1004_RS00085
location: complement(17884..18960)
location: region:17884-18960:-1
so has part: feature:17884-18960:-1:exon

WP_086981861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17884-18960:-1:exon

VCA1004_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00090
so part of: sequence
location: complement(18957..19745)
location: region:18957-19745:-1
so has part: feature:18957-19745:-1:exon
subclass of: SO_0000010

position:18957:-1
position: 18957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19745:-1
position: 19745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18957-19745:-1:exon

VCA1004_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRLWLSSLFLYSSLSYSYEAWDQNITYTAGDMVTKDGIIYVATHWNKNTPPVNNKNNWDGWITFPDNNPNWDASNTYHGGDVVAYQNKFYLAKYWNSGAIPATSEAWLILIGAEDPEPITPEEPLDPESKEAILGIDSNNNGLDDVYEAKIEQTYSNEKDKELAKDLGISWRLITEFHFIDEELIDKDTAKNTTIISSSLYSCSQDKFYKNNSYITPAELYFTTINRSYSYRMGEAKLAKVIDMNKNYIDESICQSFEVEK
SIO_010081: VCA1004_RS00090
subclass of: SO_0000673
so part of: VCA1004_RS00090
location: complement(18957..19745)
location: region:18957-19745:-1
so has part: feature:18957-19745:-1:exon

WP_086981862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18957-19745:-1:exon

VCA1004_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00095
so part of: sequence
location: complement(19951..21222)
location: region:19951-21222:-1
so has part: feature:19951-21222:-1:exon
subclass of: SO_0000010

position:19951:-1
position: 19951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21222:-1
position: 21222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19951-21222:-1:exon

VCA1004_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00095
EC number: 2.6.1.66
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005472566.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: valine--pyruvate transaminase
translation: MQFSKFGDKFNRYSGITQLMDDLNDGLRTPGAIMLGGGNPAAIPEMLDYFKQASQDMLENGDLISAMTNYDGPQGKNVFLQSLAELLKNTYGWNISEKNISLTNGSQSAFFALFNLFAGPQADGSHKKVLLPLAPEYIGYSDAGINENIFVSYHPEIEMLDNRMFKYHVDFEHLQVDDSVAAICVSRPTNPTGNVLTDDEVQKLDKLARDNHIPLILDNAYGTPFPNIIFEQVTPFWNDNTILCMSLSKLGLPGVRCGIVIASEEMTQAMTNINGIINLAPCSIGPALATHMIKNNDLLPLSENVIKPHYQAKAQHAVELLQAAIPDPRFKIHKPEGAIFLWLWFDELPITTMELYQRLKARGVLIVPGEYFFFGQDASDDGKPWQHAHQCLRMNYVQKEQDMQRGIEIIAEEVNKAYQNIPK
SIO_010081: VCA1004_RS00095
subclass of: SO_0000673
so part of: VCA1004_RS00095
location: complement(19951..21222)
location: region:19951-21222:-1
so has part: feature:19951-21222:-1:exon

WP_086981863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19951-21222:-1:exon

VCA1004_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00100
so part of: sequence
location: complement(21325..22353)
location: region:21325-22353:-1
so has part: feature:21325-22353:-1:exon
subclass of: SO_0000010

position:21325:-1
position: 21325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22353:-1
position: 22353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21325-22353:-1:exon

VCA1004_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024277.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: potassium channel family protein
translation: MPVLQQLHRWFTAKFNRLSGQNLLLALAGYLLLAWGLLYLANEHSLLPLSDFIYYIMVTGSTVGYGDMSPQTEMGKWVTALFIIPGGVGLFAIVVGRLATRAIMLWKARLLGHKKVNVENHILILGWSEDRTPHLIEMLLHEIKHSRQDIVLCSALDIENPFPSQIEFVHVNSFTDEKGLAKAGLTQAKTIIIDLDNDNDIMAAGLNCANENPTAHIVTYFRDAHLGTLLKQHCKNVECIPSIASEMIAKSAVDPGSSQLHYELVNNALGMTQYMVKYQGQPTSFSSVFSRFKQQYDAILIAVNHGDGLTLNPPLEHGIKQGDVLVYIADERITAINWDKFI
SIO_010081: VCA1004_RS00100
subclass of: SO_0000673
so part of: VCA1004_RS00100
location: complement(21325..22353)
location: region:21325-22353:-1
so has part: feature:21325-22353:-1:exon

WP_086981864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21325-22353:-1:exon

VCA1004_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: glyS
locus tag: VCA1004_RS00105
so part of: sequence
location: complement(22500..24566)
location: region:22500-24566:-1
so has part: feature:22500-24566:-1:exon
subclass of: SO_0000010

position:22500:-1
position: 22500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24566:-1
position: 24566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22500-24566:-1:exon

VCA1004_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: glyS
locus tag: VCA1004_RS00105
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001040221.1
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit beta
translation: MAKNFLIELGTEELPPTQLRTLAEAFAANFEAELNAADIAHQGVKWYAAPRRLALKVAELAESQQDKVVEKRGPAIAQAFDAEGNPTKAAQGWARGNGITVDQAERLKTDKGEWLLYKQEVKGQAVKDLLIEMAAKALAHLPIAKPMRWGDKETQFIRPVKTLTVLFGDELIAGEILGVASDRIIRGHRFMGEREFTIDNADQYPALLAEKGKVMADYEERKAIILRDSQKAAAEVGGVADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYDSNKKLLPNFIFVSNIESKDPRQVIEGNEKVVRPRLADAEFFFNTDRKRTLESHLPELETAIFQKQLGTIKDKTDRITELAGFIAEQIGADVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPSSDVAASVAMADKLDTLVGIFGIGQAPKGSDPFALRRASLGILRIIVEKGYHLDLTVLIAKAKALLGDKLTNANVEDDVLEFMLGRFRAWYQDQGFSVDIIQAVLARRPTKPLDFDQRVKAVSHFRELDAAESLAAANKRVGNILAKFDGELAADIDLSLLQEDAEKALAENVEVMTEALEPAFATGDYQQALSKLADLREPVDAFFDNVMVMADDEALKKNRLTLLNNLRNLFLQIADISLLQK
SIO_010081: VCA1004_RS00105
subclass of: SO_0000673
so part of: VCA1004_RS00105
location: complement(22500..24566)
location: region:22500-24566:-1
so has part: feature:22500-24566:-1:exon

WP_086981865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22500-24566:-1:exon

VCA1004_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: glyQ
locus tag: VCA1004_RS00110
so part of: sequence
location: complement(24569..25507)
location: region:24569-25507:-1
so has part: feature:24569-25507:-1:exon
subclass of: SO_0000010

position:24569:-1
position: 24569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25507:-1
position: 25507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24569-25507:-1:exon

VCA1004_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: glyQ
locus tag: VCA1004_RS00110
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024279.1
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit alpha
translation: MQKYDVKTFQGMILALQDYWAQVGCTIVQPLDMEVGAGTSHPMTCLRAIGPEPIATAYVQPSRRPTDGRYGENPNRLQHYYQFQVIIKPSPDNIQELYLGSLEVLGIDPLIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGIERLAMYIQGVDSVYDLVWTDGPLGKVTYGDIFHQNEVEQSTYNFEHADVDFLFGFFDQCEKECQRLLELEKPLPLPAYERILKAGHAFNLLDARKAISVTERQRYILRIRNLTKAVAEAYYASREALGFPMCKDNDVKSTQGEEK
SIO_010081: VCA1004_RS00110
subclass of: SO_0000673
so part of: VCA1004_RS00110
location: complement(24569..25507)
location: region:24569-25507:-1
so has part: feature:24569-25507:-1:exon

WP_086981866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24569-25507:-1:exon

VCA1004_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00115
so part of: sequence
location: 25884..26432
location: region:25884-26432:1
so has part: feature:25884-26432:1:exon
subclass of: SO_0000010

position:25884:1
position: 25884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26432:1
position: 26432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25884-26432:1:exon

VCA1004_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024280.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: manganese efflux pump MntP family protein
translation: MFDVLLLALALSMDALAVSIGLGAKMSSQQHTPFRLAIKAGLYFGVFQALMPFVGFLAGHSVLGWVESLAPYVAFILLLGIGIKMIYEAYSDGIEQDLRQITHRVMLTLAIATSIDAMAAGFSLPLLKVDPILACALIGVVTLLFSMLGVLIGRKSGTWLESQAELLGGVVLIIMSFKFLFV
SIO_010081: VCA1004_RS00115
subclass of: SO_0000673
so part of: VCA1004_RS00115
location: 25884..26432
location: region:25884-26432:1
so has part: feature:25884-26432:1:exon

WP_086981867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25884-26432:1:exon

VCA1004_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00120
so part of: sequence
location: 26510..26755
location: region:26510-26755:1
so has part: feature:26510-26755:1:exon
subclass of: SO_0000010

position:26510:1
position: 26510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26755:1
position: 26755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26510-26755:1:exon

VCA1004_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010433150.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTRYVGMTPKSQSYLFTFGLALTLVGMAVTDLWLPMVAGAIILAALAVEAWIRVLYIIPLKKQLQELKVKLARLEQKSSQ
SIO_010081: VCA1004_RS00120
subclass of: SO_0000673
so part of: VCA1004_RS00120
location: 26510..26755
location: region:26510-26755:1
so has part: feature:26510-26755:1:exon

WP_086981868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26510-26755:1:exon

VCA1004_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tusA
locus tag: VCA1004_RS00125
so part of: sequence
location: complement(26816..27064)
location: region:26816-27064:-1
so has part: feature:26816-27064:-1:exon
subclass of: SO_0000010

position:26816:-1
position: 26816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27064:-1
position: 27064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26816-27064:-1:exon

VCA1004_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tusA
locus tag: VCA1004_RS00125
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000143762.1
GO function: GO:0097163 - sulfur carrier activity [Evidence IEA]
GO process: GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA
translation: MTFDPNNANKILDAQGLRCPEPVMMVRKTIRTMQEGEVLLIKADDPSTTRDIPSFCRFMDHQLIQSNVDQLPYQFVIKKGLA
SIO_010081: VCA1004_RS00125
subclass of: SO_0000673
so part of: VCA1004_RS00125
location: complement(26816..27064)
location: region:26816-27064:-1
so has part: feature:26816-27064:-1:exon

WP_086981869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26816-27064:-1:exon

VCA1004_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: cyaY
locus tag: VCA1004_RS00130
so part of: sequence
location: complement(27231..27545)
location: region:27231-27545:-1
so has part: feature:27231-27545:-1:exon
subclass of: SO_0000010

position:27231:-1
position: 27231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27545:-1
position: 27545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27231-27545:-1:exon

VCA1004_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: cyaY
locus tag: VCA1004_RS00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004740462.1
GO function: GO:0005506 - iron ion binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron donor protein CyaY
translation: MNDTEFHQLVDLQMTRIEEAIDDSGADIDYDVSGNVMTLEFEDRSQIIINRQEPMHEIWLASKSGGYHFKYDGEQWICSKTGAELFRLVKGECEKHAGEEIDWV
SIO_010081: VCA1004_RS00130
subclass of: SO_0000673
so part of: VCA1004_RS00130
location: complement(27231..27545)
location: region:27231-27545:-1
so has part: feature:27231-27545:-1:exon

WP_086981870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27231-27545:-1:exon

VCA1004_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00135
so part of: sequence
location: 27621..27869
location: region:27621-27869:1
so has part: feature:27621-27869:1:exon
subclass of: SO_0000010

position:27621:1
position: 27621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27869:1
position: 27869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27621-27869:1:exon

VCA1004_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00135
inference: COORDINATES: protein motif:HMM:NF025012.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein
translation: MINHDITMKKITFSLLTMAILGLAGCGQTGPLYLPQDEPAPVNTGEVSIKGSDGSVTVTPVETTEPESATEVTEPAEAQQAE
SIO_010081: VCA1004_RS00135
subclass of: SO_0000673
so part of: VCA1004_RS00135
location: 27621..27869
location: region:27621-27869:1
so has part: feature:27621-27869:1:exon

WP_232012603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27621-27869:1:exon

VCA1004_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: lysA
locus tag: VCA1004_RS00140
so part of: sequence
location: 27880..29133
location: region:27880-29133:1
so has part: feature:27880-29133:1:exon
subclass of: SO_0000010

position:27880:1
position: 27880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29133:1
position: 29133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27880-29133:1:exon

VCA1004_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: lysA
locus tag: VCA1004_RS00140
EC number: 4.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020334062.1
GO function: GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminopimelate decarboxylase
translation: MDFFNYQDDGQLWAENVPLTQLAEQFGTPLYVYSRATLERHWKAFDSSVAKHPHLVCYAVKANSNIGVLNVLARLGSGFDIVSGGELERVIAAGGDPKKVVFSGVGKTRAEMKRALEIGIKCFNVESEPELERLNQVAGELGVTAPISLRINPDVDAHTHPYISTGLRDNKFGIAFDRAPEVYKFAASLEHLEVQGIDCHIGSQLTELAPFIDATDRLLALIDNLTEQGIQIRHLDVGGGLGVVYRDELPPQPSEYAKALLSRLQNHSHLELVFEPGRAIAANAGVLLTKVELLKPTEHKNFAVIDAAMNDLIRPSLYQAWMNIVPVVPRQGTPLSYDLVGPICETGDFLGKDRELVLEEGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGAQSHVVRQREELNRLWELENILPE
SIO_010081: VCA1004_RS00140
subclass of: SO_0000673
so part of: VCA1004_RS00140
location: 27880..29133
location: region:27880-29133:1
so has part: feature:27880-29133:1:exon

WP_086981871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27880-29133:1:exon

VCA1004_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: dapF
locus tag: VCA1004_RS00145
so part of: sequence
location: 29197..30027
location: region:29197-30027:1
so has part: feature:29197-30027:1:exon
subclass of: SO_0000010

position:29197:1
position: 29197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30027:1
position: 30027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29197-30027:1:exon

VCA1004_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: dapF
locus tag: VCA1004_RS00145
EC number: 5.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009848210.1
GO function: GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminopimelate epimerase
translation: MHFHFSKMHGLGNDFMVVDCITQNIFFSPDLIRRLSDRHTGVGFDQLLVVEAPYDPETDFHYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYSINVSTKKGRMVLKVESLDSVTVNMGKPIFEPSKIPFKAKQAEKTYILRAGEHTLFCGAVSMGNPHVVTIVEDVDSFDVETVGPLLESHERFPERVNAGFMQVIDRNTIKLRVYERGAGETQACGSGACGAVAVGIEQGLLDPEVLVHLPGGQLRIFWQGQGKPLYMTGPVAHVYDGQMSC
SIO_010081: VCA1004_RS00145
subclass of: SO_0000673
so part of: VCA1004_RS00145
location: 29197..30027
location: region:29197-30027:1
so has part: feature:29197-30027:1:exon

WP_086981872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29197-30027:1:exon

VCA1004_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00150
so part of: sequence
location: 30046..30765
location: region:30046-30765:1
so has part: feature:30046-30765:1:exon
subclass of: SO_0000010

position:30046:1
position: 30046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30765:1
position: 30765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30046-30765:1:exon

VCA1004_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006957330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF484 family protein
translation: MQADHLTAETVAEYLKDHPDFFLHRPELVEKLAFSHHQQGAVSLVEIQMRRQRQRIEELEEEITHMMSLAAKNDRTFHQLMTLQQTLLTCSSLSSLEQHIQQYSQQVKLKSHLLLLNHDNSKWALDSETFTRFRTNHLNGKSAYLGRLNRQDRQALFGGDCFASNELSELGSYVILPLNQHQPMGLLAFSSQEGGHFQPEMDTLFLRHVAALVTFMVQHLNQTTDEQTATKALSCANES
SIO_010081: VCA1004_RS00150
subclass of: SO_0000673
so part of: VCA1004_RS00150
location: 30046..30765
location: region:30046-30765:1
so has part: feature:30046-30765:1:exon

WP_086981873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30046-30765:1:exon

VCA1004_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: xerC
locus tag: VCA1004_RS00155
so part of: sequence
location: 30755..31690
location: region:30755-31690:1
so has part: feature:30755-31690:1:exon
subclass of: SO_0000010

position:30755:1
position: 30755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31690:1
position: 31690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30755-31690:1:exon

VCA1004_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: xerC
locus tag: VCA1004_RS00155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012549021.1
GO function: GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine recombinase XerC
translation: MNLNISEQMQPALQRFYDYLHHERGLSAHTQANYQRQLTTMAEQLTQLGLTHWQQVDAAWVRQLIAKANREGLKASSIGTRLSSLRSFFDYLISIDELSANPAKGVAAPKKKRPLPKNLDIDEVGQLLEVHDDDPLAIRDRAMMELMYGAGLRLAELVSIDIQHVQLSSGEIRVIGKGNKERKAPFSGQAKQWLGHWLKVRSSLANEAEPALFVSQRGSRISHRNVQKRMEEWGIKQGVSSHISPHKLRHSFATHMLESSGNLRAVQELLGHENISTTQIYTSLDFQHLAKVYDNAHPRAKKNRSPDSDQE
SIO_010081: VCA1004_RS00155
subclass of: SO_0000673
so part of: VCA1004_RS00155
location: 30755..31690
location: region:30755-31690:1
so has part: feature:30755-31690:1:exon

WP_086981874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30755-31690:1:exon

VCA1004_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: yigB
locus tag: VCA1004_RS00160
so part of: sequence
location: 31724..32452
location: region:31724-32452:1
so has part: feature:31724-32452:1:exon
subclass of: SO_0000010

position:31724:1
position: 31724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32452:1
position: 32452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31724-32452:1:exon

VCA1004_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: yigB
locus tag: VCA1004_RS00160
EC number: 3.1.3.104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006957328.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB
translation: MRFYRNLPTIKAMTFDLDDTLYDNHPVICDLEQKTAQWLHTHHPVSQSMPYSQWQTLKIRLAQQTPFLQSDVSEWRYQQIRQGLMALGYDDPKASQAAKSAMEQVLIWRHQIDVPELTHQVMSKLKQQMPLIAITNGNVNPNKIGLGDYFDLVLNAGPDGWAKPHGQMFTTALSHLGLPPENVLHVGDNLISDVAGAKYAGMSACWINDFGKSLFTEEEAKVLPDVEISSVEDLLVFIESRR
SIO_010081: VCA1004_RS00160
subclass of: SO_0000673
so part of: VCA1004_RS00160
location: 31724..32452
location: region:31724-32452:1
so has part: feature:31724-32452:1:exon

WP_086984588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31724-32452:1:exon

VCA1004_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00165
so part of: sequence
location: 32568..32846
location: region:32568-32846:1
so has part: feature:32568-32846:1:exon
subclass of: SO_0000010

position:32568:1
position: 32568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32846:1
position: 32846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32568-32846:1:exon

VCA1004_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004743819.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NIPSNAP family protein
translation: MDPKKINEFETYAKMWIPLVEKFGGQHTGYFLPSEGANNIALALFTFESLSAYEDYRIKSMQDDDCIKAFLYAEQVDCIISYERSFLRPVLS
SIO_010081: VCA1004_RS00165
subclass of: SO_0000673
so part of: VCA1004_RS00165
location: 32568..32846
location: region:32568-32846:1
so has part: feature:32568-32846:1:exon

WP_232012654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32568-32846:1:exon

VCA1004_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00170
so part of: sequence
location: complement(32904..33524)
location: region:32904-33524:-1
so has part: feature:32904-33524:-1:exon
subclass of: SO_0000010

position:32904:-1
position: 32904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33524:-1
position: 33524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32904-33524:-1:exon

VCA1004_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006647461.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DTW domain-containing protein
translation: MSSQSQSSHSHAKPCPQCGLRYQCICKQAPSLTNNINIALLTHPNEIGRVTNTGKLLSHCLPNCNLHIWDRVNPPAKLLEQIAQQTTYLLFPSEQAIELETIKPKASTESVLFIILDGTWQEAKKMLNKSPWLQSLPKVALSAAQLSSYSLRRNQAQGNLCTCEVGISLLQQLEPHNDVSSLQQYFELFLQVYEADRNHKVFGARE
SIO_010081: VCA1004_RS00170
subclass of: SO_0000673
so part of: VCA1004_RS00170
location: complement(32904..33524)
location: region:32904-33524:-1
so has part: feature:32904-33524:-1:exon

WP_086981875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32904-33524:-1:exon

VCA1004_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00175
so part of: sequence
location: complement(33560..34603)
location: region:33560-34603:-1
so has part: feature:33560-34603:-1:exon
subclass of: SO_0000010

position:33560:-1
position: 33560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34603:-1
position: 34603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33560-34603:-1:exon

VCA1004_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAYTIPLSFCALLLLSACSSQPSGPQLLAQSQPVEIATSETQRSTPQPLDEQAFIQHSQQQARTQIAQELVGTYQSQANAGLTTTLVLNADHSAITRYEYQNGDPSLIENGFWQQDDDGNIQVLMTEHDGRNINALRIFTVDGFQLTAEKEIVNGMEYQLGSHGLIVQKMKVETSLVPSDKQATQGLVTALTAANIAGSNQYNAQVDATLRHYFKINRTDPKNNRYRWLTYDLNNDQKPELFVLTDWCGSGGCTVLMFENHNDQWQFNSRITQVHTPIQVTNYHHFGWRDLIIPVSGGGVPAAHHLMSYTGVSYPLNASTAPVTSQSAAVNLFSDNISAAQQGITM
SIO_010081: VCA1004_RS00175
subclass of: SO_0000673
so part of: VCA1004_RS00175
location: complement(33560..34603)
location: region:33560-34603:-1
so has part: feature:33560-34603:-1:exon

WP_086981876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33560-34603:-1:exon

VCA1004_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00180
so part of: sequence
location: 34667..35119
location: region:34667-35119:1
so has part: feature:34667-35119:1:exon
subclass of: SO_0000010

position:34667:1
position: 34667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35119:1
position: 35119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34667-35119:1:exon

VCA1004_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024293.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EVE domain-containing protein
translation: MAYWLFKTEPDTFSIDTLRLQKVACWEGVRNYQARNMLRDEIKLGDEVLIYHSSCKKIGVAGIARVVKEAYPDHFQFDPDSPYFDIKADPSNPRWMMVDIEFVRKFERIVTLAELKAIPDLENMPLVKRGNRLSVMPVSEDEWQTILHQE
SIO_010081: VCA1004_RS00180
subclass of: SO_0000673
so part of: VCA1004_RS00180
location: 34667..35119
location: region:34667-35119:1
so has part: feature:34667-35119:1:exon

WP_086981877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34667-35119:1:exon

VCA1004_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00185
so part of: sequence
location: complement(35212..36048)
location: region:35212-36048:-1
so has part: feature:35212-36048:-1:exon
subclass of: SO_0000010

position:35212:-1
position: 35212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36048:-1
position: 36048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35212-36048:-1:exon

VCA1004_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016768435.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Cof-type HAD-IIB family hydrolase
translation: MSNSSLFAQTDLQDVRIVASDLDGTLLLPDHTLGELTKNTLKKLHDQGMTFIFATGRHHIDVESFRASAGIPAYMITSNGARVHSPENELLYSKNLPENVIQPIVDIIKHDPTHRIHIYRSNDWLTDKEDLKLSQHHQESGFNYALFDVDNAPTEDIAKLFFTHPDHDHLAEYEQQLKEKFGDQISIAFSTPWCLEMMAPHVSKGDALQAVAHKLGKDLEHCIAFGDGMNDVEMLQAAHKGLVMGTAHSKVMQALPNNEVIGCCADEAVARYLEDHLL
SIO_010081: VCA1004_RS00185
subclass of: SO_0000673
so part of: VCA1004_RS00185
location: complement(35212..36048)
location: region:35212-36048:-1
so has part: feature:35212-36048:-1:exon

WP_086981878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35212-36048:-1:exon

VCA1004_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00190
so part of: sequence
location: complement(36184..37164)
location: region:36184-37164:-1
so has part: feature:36184-37164:-1:exon
subclass of: SO_0000010

position:36184:-1
position: 36184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37164:-1
position: 37164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36184-37164:-1:exon

VCA1004_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024295.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MSNNNPQWQRENQLFEFSQQTLAPFWNGRNEGFIMGELHKKLYWVSFTKKENTKAILVVNGRIESVYKYQELFWDLTEQGYDVYSYDHRGQGMSERCCDDRQIGHVEHFDNYIKDMHQIVQTFDFSRYDKAFILAHSMGGAISTRYLQTYSEHPFAAITLSAPMMGIQMQWFLRPFSAPLTRWMAARSPIPNYALGQQAYIAKPFENNHLTHSPSRYQWFRDLYAAQPDIQLGGPSNHWVNQSLLAAKRCIIEATNITIPVLLMQASQDTIVDNAAQLRFIKALNQRHPGRGQFHPIQGAHHELLFERDELRIQALQYCLDFFNAQ
SIO_010081: VCA1004_RS00190
subclass of: SO_0000673
so part of: VCA1004_RS00190
location: complement(36184..37164)
location: region:36184-37164:-1
so has part: feature:36184-37164:-1:exon

WP_086981879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36184-37164:-1:exon

VCA1004_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00195
so part of: sequence
location: 37479..38492
location: region:37479-38492:1
so has part: feature:37479-38492:1:exon
subclass of: SO_0000010

position:37479:1
position: 37479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38492:1
position: 38492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37479-38492:1:exon

VCA1004_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014233320.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MTQRVFFFDLLRCVAAIAVIAIHVLAPYRDLLGVIPLYEWSFAVGVNSMTRWAVPVFIMISGALLLSDTRPFDLKYYLRRRVGKVLLPFIVWSLFYAYLSGWSANGFDATLSREVLFNMGQHETYYHLGFFYYFIPLYFVIPFFQYLVKNTDDSALYALLSMWLVTTVFFLVRFDGLWSNQYYLYSGYLLLGYVCYQKLATTKSVLSLVTLLGGAALACTAIAVICGSIEQQQYTFGRWLSYKTLNTVLAASMVFMLCRYFADRLSERSQKVISFISTYSLGIYILHPLFLWPMKAYGWHQGNPLWVIPVWIILSGSGALALSWLLSRSSKTRWLLP
SIO_010081: VCA1004_RS00195
subclass of: SO_0000673
so part of: VCA1004_RS00195
location: 37479..38492
location: region:37479-38492:1
so has part: feature:37479-38492:1:exon

WP_086981880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37479-38492:1:exon

VCA1004_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00200
so part of: sequence
location: complement(38499..38834)
location: region:38499-38834:-1
so has part: feature:38499-38834:-1:exon
subclass of: SO_0000010

position:38499:-1
position: 38499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38834:-1
position: 38834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38499-38834:-1:exon

VCA1004_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004740515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2500 domain-containing protein
translation: MPVTLLLSLVLLIGLSAWIAIQFHKKHQLGQDAPELTIKVAILDKQSIDIPEAQPGQDDQEYWIYVQKLPIGPKREFKVGVHYYSALNPGDKGMLTYQGDQFLHFALQRQS
SIO_010081: VCA1004_RS00200
subclass of: SO_0000673
so part of: VCA1004_RS00200
location: complement(38499..38834)
location: region:38499-38834:-1
so has part: feature:38499-38834:-1:exon

WP_086981881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38499-38834:-1:exon

VCA1004_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00205
so part of: sequence
location: 38992..39369
location: region:38992-39369:1
so has part: feature:38992-39369:1:exon
subclass of: SO_0000010

position:38992:1
position: 38992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39369:1
position: 39369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38992-39369:1:exon

VCA1004_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010319862.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4145 domain-containing protein
translation: MSGIEKVVMYTRRLERLLRQQYYAEGEGLIELTESCRTRLPHDVVKNIHHIVELRQRLLDEDDAEHNLMSDFVFACIQCEKELTPRSGRLIWGVAIVFVLLMTFGTLLFYFVHWDIVSEHLKLNG
SIO_010081: VCA1004_RS00205
subclass of: SO_0000673
so part of: VCA1004_RS00205
location: 38992..39369
location: region:38992-39369:1
so has part: feature:38992-39369:1:exon

WP_086981882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38992-39369:1:exon

VCA1004_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00210
so part of: sequence
location: 40321..40947
location: region:40321-40947:1
so has part: feature:40321-40947:1:exon
subclass of: SO_0000010

position:40321:1
position: 40321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40947:1
position: 40947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40321-40947:1:exon

VCA1004_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00210
inference: COORDINATES: protein motif:HMM:NF019559.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysoplasmalogenase family protein
translation: MWYWLLMGALLLLMLSLMKLNKPKLFSASKLTILVTLTVILLTSLEITHIASLWSFFALAFFMLCYGVDAFAPRHRVLQLIFFSIACLGYSLDFWAQVETLNWAVPIALFALIVVVFFLLLPLLESFIIEASLVAVILWQLSWASGQLWQDQHSLLALSGFIGTLLLAASVLIWSIHYLKKPFKFSYEWLMLCYFSAHILVVAPLVLQ
SIO_010081: VCA1004_RS00210
subclass of: SO_0000673
so part of: VCA1004_RS00210
location: 40321..40947
location: region:40321-40947:1
so has part: feature:40321-40947:1:exon

WP_086981883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40321-40947:1:exon

VCA1004_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00215
so part of: sequence
location: 41062..41646
location: region:41062-41646:1
so has part: feature:41062-41646:1:exon
subclass of: SO_0000010

position:41062:1
position: 41062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41646:1
position: 41646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41062-41646:1:exon

VCA1004_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017052886.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhgN family NAAT transporter
translation: MEILSAAVMLFLIMDPLGNLPVILSILKHLDPKRRRVVLIRELSFALVVLLLFLFAGKSILNFLHIEAETLRISGGLILFIIAIRMIFPQPGGVVGLAAGEEPFFVPMAVPMIAGPSVIASLLLLSSHSPDRMLDWSLALLLAWGATFLVLMFYSFFHRVLGEKGLKAIERLMGLLLVMMSTQMFLDGMKQYLG
SIO_010081: VCA1004_RS00215
subclass of: SO_0000673
so part of: VCA1004_RS00215
location: 41062..41646
location: region:41062-41646:1
so has part: feature:41062-41646:1:exon

WP_086981884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41062-41646:1:exon

VCA1004_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00220
so part of: sequence
location: complement(41706..41975)
location: region:41706-41975:-1
so has part: feature:41706-41975:-1:exon
subclass of: SO_0000010

position:41706:-1
position: 41706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41975:-1
position: 41975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41706-41975:-1:exon

VCA1004_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024304.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1145 domain-containing protein
translation: MKKLLNLIAKVFMLMVWMVFITNLIQPFPGVAHIAMNVMALFTLVMHGLQSFLFSSALPKGVSLSKWEKCTIILFGTFALLDLKDKYLK
SIO_010081: VCA1004_RS00220
subclass of: SO_0000673
so part of: VCA1004_RS00220
location: complement(41706..41975)
location: region:41706-41975:-1
so has part: feature:41706-41975:-1:exon

WP_086981885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41706-41975:-1:exon

VCA1004_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rsmD
locus tag: VCA1004_RS00225
so part of: sequence
location: complement(41977..42582)
location: region:41977-42582:-1
so has part: feature:41977-42582:-1:exon
subclass of: SO_0000010

position:41977:-1
position: 41977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42582:-1
position: 42582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41977-42582:-1:exon

VCA1004_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rsmD
locus tag: VCA1004_RS00225
EC number: 2.1.1.171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024305.1
GO function: GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
translation: MQRRKASSSSSAKGSTGFIRIISGLWRGRKLPVHDAQGLRPTTDRVKETLFNWLAPEIPHAKCLDLFAGSGGLGFEAASRQAELVTMVELNKQAYQQLTQNAQQLKATNIEIHHQDALTFLQQTGQAYDIVFIDPPFRQGLLEQTLNLLQQNGWLTDHGLVYIETEKELQLPPLPPQWQLHREKTAGQVCYRLYQLMEDEE
SIO_010081: VCA1004_RS00225
subclass of: SO_0000673
so part of: VCA1004_RS00225
location: complement(41977..42582)
location: region:41977-42582:-1
so has part: feature:41977-42582:-1:exon

WP_086981886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41977-42582:-1:exon

VCA1004_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ftsY
locus tag: VCA1004_RS00230
so part of: sequence
location: 42782..44011
location: region:42782-44011:1
so has part: feature:42782-44011:1:exon
subclass of: SO_0000010

position:42782:1
position: 42782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44011:1
position: 44011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42782-44011:1:exon

VCA1004_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ftsY
locus tag: VCA1004_RS00230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019825167.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal recognition particle-docking protein FtsY
translation: MTAKKKRGLLSWLGFAEEENKVSTDQTSESSQNDAVESQDEQTSNNLDSQPAEVEQTSTETEVVLNADPEEAPQAELEEGQTESVQAAEALTPERVQEQTKPTESFFARLKRSLQRTKQNIGAGFFGLFKGKKIDEELFEELEEQLLIADVGMNTTVKIIDNLTEKASRQDLKDGEALYGLLKQEMADILAEVEQPLEIDSSKTPYVILMVGVNGVGKTTTIGKLAKQFQSQGKSVILAAGDTFRAAAVEQLQVWGQRNDVPVIAQHTGADSASVIYDAIEAARARGVDVVIADTAGRLQNKSNLMEELGKIVRVMKKIDDSAPHEIMLTLDAGTGQNAISQAKLFNDVAPVTGINLTKLDGTAKGGVIFALADQFHIPIRYIGVGEGIDDLRPFQAQDFIEALFSREE
SIO_010081: VCA1004_RS00230
subclass of: SO_0000673
so part of: VCA1004_RS00230
location: 42782..44011
location: region:42782-44011:1
so has part: feature:42782-44011:1:exon

WP_086981887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42782-44011:1:exon

VCA1004_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ftsE
locus tag: VCA1004_RS00235
so part of: sequence
location: 44067..44741
location: region:44067-44741:1
so has part: feature:44067-44741:1:exon
subclass of: SO_0000010

position:44067:1
position: 44067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44741:1
position: 44741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44067-44741:1:exon

VCA1004_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ftsE
locus tag: VCA1004_RS00235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017051804.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division ATP-binding protein FtsE
translation: MIKFQQVSKVYRGGHQALQKVDFHLKRGEMAFLGGHSGAGKSTLLKLICAIERPSDGHILFNEHDISRIASKDIPFLRRNIGIIFQDHRLLMDRTVFDNVALPMRIEGASENEIKRRVSAALDKIGMLDKAPCLPRQLSGGEQQRVGIARAVVNRPRLLLADEPTGNLDHALSHQVLNLLEEFNRAGVSIILATHDLELVNSRPQYRRFELNQGFLSEVDRYGQ
SIO_010081: VCA1004_RS00235
subclass of: SO_0000673
so part of: VCA1004_RS00235
location: 44067..44741
location: region:44067-44741:1
so has part: feature:44067-44741:1:exon

WP_086981888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44067-44741:1:exon

VCA1004_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ftsX
locus tag: VCA1004_RS00240
so part of: sequence
location: 44731..45696
location: region:44731-45696:1
so has part: feature:44731-45696:1:exon
subclass of: SO_0000010

position:44731:1
position: 44731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45696:1
position: 45696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44731-45696:1:exon

VCA1004_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ftsX
locus tag: VCA1004_RS00240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024308.1
GO process: GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: permease-like cell division protein FtsX
translation: MVNKKKKAAKASKANARPTSEGFFSTHIKQAKASFRSLMSRPLGTILTLAVVSMSLTLPATFYTAGKNIATVAEEMNSASQISVYLKEGTPEARLMVFKDQLENMPEVQSVRYISSQQGIEDLSQFSGLEKAMSLLSSTSLPPVLVILPKAEQSGSIKMLARKLQAESDVTDVRLDEDWFARLDAIKHLAYIVSCSFAVLMLVSVFLIVGNTLRFNILAHKEEIQVMKLIGATDRFILRPYLYTGLWLGLLGALIAWILTVIITLLVSGAVDDLANLYDSHFSLLGLGWDETVLLLMIGSALGWIAANLSARKHLKEIEPV
SIO_010081: VCA1004_RS00240
subclass of: SO_0000673
so part of: VCA1004_RS00240
location: 44731..45696
location: region:44731-45696:1
so has part: feature:44731-45696:1:exon

WP_086981889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44731-45696:1:exon

VCA1004_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpoH
locus tag: VCA1004_RS00245
so part of: sequence
location: 45945..46799
location: region:45945-46799:1
so has part: feature:45945-46799:1:exon
subclass of: SO_0000010

position:45945:1
position: 45945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46799:1
position: 46799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45945-46799:1:exon

VCA1004_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpoH
locus tag: VCA1004_RS00245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020331959.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoH
translation: MSNAYPMALVTSDSLDSYIRTANSYPMLSAEEERDLAERLHYHGEIEAAKGLILSHLRFVVHVARGYSGYGLALADLIQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVAQELGVSAHEVREMESRLAAQDATFEMPSEDDDSVSSYTAPVLYLEDKHSDIAENIEADNWESHTNNRLDHALATLDERSQHIVRSRWLDDQKATLQELAETYNVSAERIRQLEKNAMKKLKSAVGEL
SIO_010081: VCA1004_RS00245
subclass of: SO_0000673
so part of: VCA1004_RS00245
location: 45945..46799
location: region:45945-46799:1
so has part: feature:45945-46799:1:exon

WP_086981890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45945-46799:1:exon

VCA1004_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: glpE
locus tag: VCA1004_RS00250
so part of: sequence
location: 47207..47530
location: region:47207-47530:1
so has part: feature:47207-47530:1:exon
subclass of: SO_0000010

position:47207:1
position: 47207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47530:1
position: 47530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47207-47530:1:exon

VCA1004_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: glpE
locus tag: VCA1004_RS00250
EC number: 2.8.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024310.1
GO function: GO:0004792 - thiosulfate sulfurtransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiosulfate sulfurtransferase GlpE
translation: MDQFQHIDVDTAQQMLSNSSAVLLDIRDPQSFALSHAQGARHLTNDTIVALMEELEFEQPILVMCYHGISSQGAAQYLVNQGFEEVYSVDGGFEAWQRSQLPMITMA
SIO_010081: VCA1004_RS00250
subclass of: SO_0000673
so part of: VCA1004_RS00250
location: 47207..47530
location: region:47207-47530:1
so has part: feature:47207-47530:1:exon

WP_086981891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47207-47530:1:exon

VCA1004_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: glpG
locus tag: VCA1004_RS00255
so part of: sequence
location: 47613..48443
location: region:47613-48443:1
so has part: feature:47613-48443:1:exon
subclass of: SO_0000010

position:47613:1
position: 47613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48443:1
position: 48443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47613-48443:1:exon

VCA1004_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: glpG
locus tag: VCA1004_RS00255
EC number: 3.4.21.105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017051808.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0019538 - protein metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhomboid family intramembrane serine protease GlpG
translation: MIRLISFNNPRVAQAFVDYMASRDIEIIMMPEGEGQFALWLKQAEHQLEVEAELEVFIRNPQDRKYQAASWQTADSRTQQFHYHTPSFFAQIKEKAGPFTLIIMLTCVVIYGLLFLGFGQTLFQALHFPASIEQKWQLWRWISHTFLHFSVTHIVFNLLWWWQFGGDIEKKLGSFKLVQLFAVSAALSGAAQYWVEGANFGGLSGVVYALMGYIWVLGWRSPEKGLFIHKTLVVFMLGWLVLGFIQPFMAIANSAHLAGLVTGCVMAALEGKSRKA
SIO_010081: VCA1004_RS00255
subclass of: SO_0000673
so part of: VCA1004_RS00255
location: 47613..48443
location: region:47613-48443:1
so has part: feature:47613-48443:1:exon

WP_086981892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47613-48443:1:exon

VCA1004_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00260
so part of: sequence
location: 48550..49107
location: region:48550-49107:1
so has part: feature:48550-49107:1:exon
subclass of: SO_0000010

position:48550:1
position: 48550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49107:1
position: 49107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48550-49107:1:exon

VCA1004_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00260
EC number: 4.1.3.40
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017051810.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008813 - chorismate lyase activity [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chorismate lyase
translation: MNDNFSSYFNYFSTLSWQSVEQFQFSEQLDSQWLQEQGSLSQRFSLQCDHLCAQVLRNQLVSANDLTDFQKKMLFAQSHSEQECLIRDVILIADDEPWLLGSTIIPRSSLSDEQFDLSQQGEVPLGLTVFQAQQVARDGLHLGMIDSPLGALAARSSRLWMNQKPMLVAELFLPPSPIYRKEGMK
SIO_010081: VCA1004_RS00260
subclass of: SO_0000673
so part of: VCA1004_RS00260
location: 48550..49107
location: region:48550-49107:1
so has part: feature:48550-49107:1:exon

WP_086984589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48550-49107:1:exon

VCA1004_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ubiA
locus tag: VCA1004_RS00265
so part of: sequence
location: 49104..49961
location: region:49104-49961:1
so has part: feature:49104-49961:1:exon
subclass of: SO_0000010

position:49104:1
position: 49104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49961:1
position: 49961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49104-49961:1:exon

VCA1004_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ubiA
locus tag: VCA1004_RS00265
EC number: 2.5.1.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024313.1
GO function: GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxybenzoate octaprenyltransferase
translation: MTLAKAAAYWQLTRMNRPIGSLLLLWPTVWALLLAAGGLPDWHVALVFILGVFTMRSAGCVINDFADRKVDGHVKRTKHRPLPSGLVSTKEALMLFFVLVLISFLLVLSMNRLTIELSLVGVILAFIYPFMKRFTHVPQLFLGLAFSWAIPMAWAAEAGYLPNEVWLVFIINVVWTIAYDTQYAMVDRDDDIKIGIKSTAILFGRFDKLIIGLLQLACLLLLMVLGDWMGLAQPYYWSLLVAAALFVYQQRLIKDRERDACFSAFLNNNYVGMVIAVGVFGGVMG
SIO_010081: VCA1004_RS00265
subclass of: SO_0000673
so part of: VCA1004_RS00265
location: 49104..49961
location: region:49104-49961:1
so has part: feature:49104-49961:1:exon

WP_086981893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49104-49961:1:exon

VCA1004_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: plsB
locus tag: VCA1004_RS00270
so part of: sequence
location: complement(50109..52544)
location: region:50109-52544:-1
so has part: feature:50109-52544:-1:exon
subclass of: SO_0000010

position:50109:-1
position: 50109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52544:-1
position: 52544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50109-52544:-1:exon

VCA1004_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: plsB
locus tag: VCA1004_RS00270
EC number: 2.3.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006879186.1
GO function: GO:0004366 - glycerol-3-phosphate O-acyltransferase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate 1-O-acyltransferase PlsB
translation: MSYGHLVSRSLLKLPLSLLVKGKTIPANPVEELTLDLTKPIIYAMPFDSDIDLISLQTQTKALGLPDPLAPLVINGQEFSRFVFLTSKGFTTQSKQALPKQSVTLFTQLLKLHQADSELDIQMLPTSILWGRKPNKEGKEKPYLQSMSACQKSVLLVSSGRDCLIRFSPVVSLRYMADTHGVDEIIAHKLARVARIHFSRQKLAASGPSLPQRHVLFNRLLKSPEIQKAIQDEAKSKNIPLEKAQKQAQDMLEEIAADFSYTLIRMGARFLGWLWNKLYQGLNISNMASVRKLAQDGHEIIYVPCHRSHMDYLLLSYVLHNEGMVPPHIAAGVNLNFFPAGPIFRRGGAFFIRRSFKGNKLYSTIFREYLAELFIKGYSVEFFSEGGRSRTGRLLQAKTGMLAMTIQTMMRGLNRPVTLVPVYIGYEHVMEVATYAKELTGKRKEKESAGMVLKTLRKLRNFGQGYVNFGEPINLNQYLNEEVPGWSSKQTHDPDNAPKPQWMNPVINKLANKMMTHINDAAAANALTLCATALLASNQRALSRRKLEQQIDCYLSLLTQVPYSATSTVPNASAVELIEHAEKLDKFIVEADDKGDIISLDRRQSILMTYYRNNIIHLFAIPSLIAHLVIQKEGITRQQLHQAIQLIYPFLKAELFLHYSEADLENVVNNTVDELARQHLILEQEDTLSINPAKVQVLILLSRTIVETLQRYAIALTQLVAMPKIEKGTLEQQSQNIAQRLGRLHGINAPEFFDKGVFTTLFQTLKQQGYLDQQAEQTHKIQVLVDLLGELLSPEIQLTLQESIMRQDDSL
SIO_010081: VCA1004_RS00270
subclass of: SO_0000673
so part of: VCA1004_RS00270
location: complement(50109..52544)
location: region:50109-52544:-1
so has part: feature:50109-52544:-1:exon

WP_086981894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50109-52544:-1:exon

VCA1004_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: lexA
locus tag: VCA1004_RS00275
so part of: sequence
location: 52812..53435
location: region:52812-53435:1
so has part: feature:52812-53435:1:exon
subclass of: SO_0000010

position:52812:1
position: 52812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53435:1
position: 53435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52812-53435:1:exon

VCA1004_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: lexA
locus tag: VCA1004_RS00275
EC number: 3.4.21.88
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012534359.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor LexA
translation: MKPLTPRQQQIFELIKDKIDVTGMPPTRAEIARELGFRSANAAEEHLKALARKNVIEIIPGASRGIRIVQAEDAILEDQGLPLIGQVAAGEPILAQEHVESHYQVDPAMFKPQADFLLRVHGMSMKDIGIIDGDLLAVHKTQDVRDGQVVVARVDDDVTVKRLERKGAKVLLHAENEEFNPIEVDLTQQELTIEGLAVGIIRNNTWM
SIO_010081: VCA1004_RS00275
subclass of: SO_0000673
so part of: VCA1004_RS00275
location: 52812..53435
location: region:52812-53435:1
so has part: feature:52812-53435:1:exon

WP_086981895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52812-53435:1:exon

VCA1004_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00280
so part of: sequence
location: 53538..54362
location: region:53538-54362:1
so has part: feature:53538-54362:1:exon
subclass of: SO_0000010

position:53538:1
position: 53538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54362:1
position: 54362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53538-54362:1:exon

VCA1004_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00280
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006742757.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MNTSFAPKKTPPCQAYQVPSDLLQPLWLRSRESLIDNGLVYDPIAARACQRCHLSDDCLSGDIDQKQLLHATLTSLCDLEVSRFLLHHPKAWIINVGAGLDTRFYRLDNGLCHWIEVDIDETLLWRQKLFHHSERYTMACGSVLDMKWLEQLAIPEDVPVLVVCEQALLAQQRNQVAHFIQKIGRHFSHAEACLVLAGDKTQSYWGVKMGCVAYAHSLKNPVASVVSWLPWVYQIKALSPIESECDRWRAWQRIVAKFPFIKHRLTPSLVHIRW
SIO_010081: VCA1004_RS00280
subclass of: SO_0000673
so part of: VCA1004_RS00280
location: 53538..54362
location: region:53538-54362:1
so has part: feature:53538-54362:1:exon

WP_086981896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53538-54362:1:exon

VCA1004_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: dinF
locus tag: VCA1004_RS00285
so part of: sequence
location: 54469..55818
location: region:54469-55818:1
so has part: feature:54469-55818:1:exon
subclass of: SO_0000010

position:54469:1
position: 54469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55818:1
position: 55818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54469-55818:1:exon

VCA1004_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: dinF
locus tag: VCA1004_RS00285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024317.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter DinF
translation: MINQLLHILSQRTLHKQVLVLAIPMVLSNITVPLLGLVDAAVIGHLDYAWYLGGVALGSTMISVTFWLLGFLRMATTGLAAQAQGEQHPEKLALVWLQGMLVALALAGAFLLFHSPLADMIFSLSNASEEVKHYGMQYFSIRVWSAPAALANFVILGWLLGTQNAKAPMWLVITINVTNIILDVVFVLVLDWKVAGAAWASVLADYSGLLLGLMFVMRTWLKQQLPNMLTLVPLATQGIGRMLRLNSDIFLRSLCLQAVFSFMTFQGAALGDEIVAANAVLMSFLMMVSYGMDGFAYAMEAMVGKAVGAKSRGQLLHSLIGTSFWGLVCSVLLTVLFLLFGHQLVRLITDIPNVQAQADIYLPWLMIMPIVSMWCFLLDGIFVGATKGKDMRNSMLVAMLCFFALYFSLADWGNHALWLAMVCFMGMRGVGLAILFYRQWRSHTFIESV
SIO_010081: VCA1004_RS00285
subclass of: SO_0000673
so part of: VCA1004_RS00285
location: 54469..55818
location: region:54469-55818:1
so has part: feature:54469-55818:1:exon

WP_086981897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54469-55818:1:exon

VCA1004_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: sthA
locus tag: VCA1004_RS00290
so part of: sequence
location: complement(55893..57293)
location: region:55893-57293:-1
so has part: feature:55893-57293:-1:exon
subclass of: SO_0000010

position:55893:-1
position: 55893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57293:-1
position: 57293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55893-57293:-1:exon

VCA1004_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: sthA
locus tag: VCA1004_RS00290
EC number: 1.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019274068.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0003957 - NAD(P)+ transhydrogenase (B-specific) activity [Evidence IEA]
GO process: GO:0045454 - cell redox homeostasis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Si-specific NAD(P)(+) transhydrogenase
translation: MMDSTHFDVIVIGSGPGGEGAAMGLAKAGLHVAIIEKESSVGGGCTHWGTIPSKALRHAVSRIIEFNNNPLFCKNNTSLTASFSNILDHAKTVIDKQTRLRQGFYDRNSCTLLFGQASFTGPNSISVAQVDGTTEQYTADKFVIATGSRPYQPQDVDFTHERIYNSDTILNLKHDPRHIIIYGAGVIGCEYASIFRGLEVKTDLINTRDRLLAFLDNETSDALSYHFWNSGVVIRNDETYSKIEGTDDGVIVHLESGKKMKADCLLYANGRTGNTDTLNLELVGLKPDSRGQLTVNHGYQTEVEHVYAVGDVIGYPSLASAAYDQGRFVAQAIAKGKADTFLIEDIPTGIYTIPEISSVGKTEQELTAAKVPYEVGRASFKHLARAQIAGKDIGSLKILFHRDTKQILGIHCFGERAAEIIHIGQAIMEQKGPANTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF
SIO_010081: VCA1004_RS00290
subclass of: SO_0000673
so part of: VCA1004_RS00290
location: complement(55893..57293)
location: region:55893-57293:-1
so has part: feature:55893-57293:-1:exon

WP_086981898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55893-57293:-1:exon

VCA1004_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fabR
locus tag: VCA1004_RS00295
so part of: sequence
location: 57536..58150
location: region:57536-58150:1
so has part: feature:57536-58150:1:exon
subclass of: SO_0000010

position:57536:1
position: 57536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58150:1
position: 58150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57536-58150:1:exon

VCA1004_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fabR
locus tag: VCA1004_RS00295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024319.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional repressor FabR
translation: MGIRAQQKEKTRRSLIDAAFGQLSADRGFSNLSLREVSREAGIAPTSFYRHFKDMDELGLVMVDEGGLLLRQLMRQARQRIVAEGSLIRTSVQTFMEFIKQSPNVFRLLLRERSGTSAEFRAAVAREVQHFGAELTEYLVRAGVEQELAAIQAEASVTIVFTSGAEALDLDEEARNVLAERMILQLRMLAKGTTLMKGSIKSSL
SIO_010081: VCA1004_RS00295
subclass of: SO_0000673
so part of: VCA1004_RS00295
location: 57536..58150
location: region:57536-58150:1
so has part: feature:57536-58150:1:exon

WP_086981899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57536-58150:1:exon

VCA1004_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: trmA
locus tag: VCA1004_RS00300
so part of: sequence
location: complement(58249..59361)
location: region:58249-59361:-1
so has part: feature:58249-59361:-1:exon
subclass of: SO_0000010

position:58249:-1
position: 58249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59361:-1
position: 59361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58249-59361:-1:exon

VCA1004_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: trmA
locus tag: VCA1004_RS00300
EC number: 2.1.1.35
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010438685.1
GO function: GO:0030697 - S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (uridine(54)-C5)-methyltransferase TrmA
translation: MANLTHDTISYAQQLEDKLHRLGDMFGDFITPEIEVFESPEQHYRMRAEFRVWHEGEDMYYIMFDQATRQKYRVDQFPTASRLINDLMPLLMDAMKGCPILRTKLFQVDFLSTLSGEVLVSLLYHRQLDDAWQQEARRLKQRLNEEGFNLDLIGRARKMKLVMDRDYVVEKLQVNGKPYIYQQVENSFTQPNGIVAQKMLEWAVDCTQDSQGDLLELYCGNGNFSLALAQNFERVLATELAKPSVDSAQYNIQANHIDNVQIIRMSAEDFTDAMEGKREFRRLKDNGIDLTSYNCNTIFVDPPRSGMDEGTCKMVQGYERIMYISCNPETLKDNLSILAQTHNITRFALFDQFPFTHHMEVGVFLERKTA
SIO_010081: VCA1004_RS00300
subclass of: SO_0000673
so part of: VCA1004_RS00300
location: complement(58249..59361)
location: region:58249-59361:-1
so has part: feature:58249-59361:-1:exon

WP_086981900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58249-59361:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1891186
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.1
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: 59528..59744
location: region:59528-59744:1
so has part: feature:59528-59744:1:region

position:59528:1
position: 59528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59744:1
position: 59744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59528-59744:1:region

VCA1004_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00305
so part of: sequence
location: 59782..61584
location: region:59782-61584:1
so has part: feature:59782-61584:1:exon
subclass of: SO_0000010

position:59782:1
position: 59782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61584:1
position: 61584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59782-61584:1:exon

VCA1004_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00305
inference: COORDINATES: protein motif:HMM:NF012801.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MKTISFATGLTTVASCVLLAFPSYAQSSEATTDVMLVTATKRTEPITNLTSPVIEITKEEITQSQANTLFDVLRQLPGIQLTQNGGPNQPARVYVRGSGNVVVLFNGVRLGSATLGYSDISQIPLAGVQKIEYLRGSRAAVYGADATAGVINIMTNGTNTETTGSVKATGGSDGYQSYTGSVAMVPSDKAWVNITAQYQHSDGYNVAEFGSQDRDGYENSNVIADWGVQLDNNWLIRMNGYYHQGQTEYDYDPLWGLSADQNKTNNYSVNGQVIYTSERFVSNLTYANSEDKSKTQHNVPSSQTVTQTNQVTWRNNFQWTQTNSIGFGAEYLNNDVSDSDTVYEVQERDNKAAYLTLGHNGSVLQLEGSVRFDDNEQFGDKTTWQLGAGWQFIQSLRLTANVGTGFKAPTFNELYYPGWSNPDLNPEESTNYEVALEGEHNLLNWRLAGFYNDIDNRISCQSTYSTCENDNVVIQGIEWVGNFQTGPLYHQVSLEYLDPEDKDSGQDAVRIARQNYKWQVGYQADKWQTNLSYIYQGKRYDSGNTRLDAYSLVNLAASYDLTPNWVLAARIENLFDADYETAATYIEPERTYYGSIAYQF
SIO_010081: VCA1004_RS00305
subclass of: SO_0000673
so part of: VCA1004_RS00305
location: 59782..61584
location: region:59782-61584:1
so has part: feature:59782-61584:1:exon

WP_086981901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59782-61584:1:exon

VCA1004_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: murI
locus tag: VCA1004_RS00310
so part of: sequence
location: 61719..62528
location: region:61719-62528:1
so has part: feature:61719-62528:1:exon
subclass of: SO_0000010

position:61719:1
position: 61719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62528:1
position: 62528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61719-62528:1:exon

VCA1004_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: murI
locus tag: VCA1004_RS00310
EC number: 5.1.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006713572.1
GO function: GO:0008881 - glutamate racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate racemase
translation: MDTSINSVPKVLVFDSGVGGLSVYQQIEQRYPYFDYVYLFDNEAYPYGELAEAILIERVVSLVTNIVAQQQVDMVVIACNTASTIVLPYLRQQLSIPVVGVVPAIKPAAQLSKQAIGLIATPATIQRPYTHQLIDQFSPDTEVKLLGSTRLVTIAEEKLRGQSADLNELQVILQPLLGSIDVAVLGCTHFPLLKQEIQQVFGDGVRLVDSGEAIAKRVGGLLKAKVQHESATKRHAIYSSATPWEGMALDKGVANFGFSPVQPLHFQGV
SIO_010081: VCA1004_RS00310
subclass of: SO_0000673
so part of: VCA1004_RS00310
location: 61719..62528
location: region:61719-62528:1
so has part: feature:61719-62528:1:exon

WP_232012604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61719-62528:1:exon

VCA1004_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00315
so part of: sequence
location: complement(62491..62946)
location: region:62491-62946:-1
so has part: feature:62491-62946:-1:exon
subclass of: SO_0000010

position:62491:-1
position: 62491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62946:-1
position: 62946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62491-62946:-1:exon

VCA1004_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017049959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-binding protein
translation: MNSNKSTVTVITIAIIGAVIFSLTDIIPAWGSFLIGVIATFVVTSKSSSNQSQDSSEKASTQTLYVGNLPYKANESNVRQLFSEYGEVFAVRLMKDKRTGKRRGFGFVVVAESDTDSVISALNEKDYMQRTLKVRVANDPKHPESGVAEQD
SIO_010081: VCA1004_RS00315
subclass of: SO_0000673
so part of: VCA1004_RS00315
location: complement(62491..62946)
location: region:62491-62946:-1
so has part: feature:62491-62946:-1:exon

WP_086981902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62491-62946:-1:exon

VCA1004_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00320
so part of: sequence
location: 63573..65115
location: region:63573-65115:1
so has part: feature:63573-65115:1:exon
subclass of: SO_0000573

position:63573:1
position: 63573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65115:1
position: 65115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63573-65115:1:exon

VCA1004_RS00320
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
locus tag: VCA1004_RS00320
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00320
subclass of: SO_0000673
so part of: VCA1004_RS00320
location: 63573..65115
location: region:63573-65115:1
so has part: feature:63573-65115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63573-65115:1:exon

VCA1004_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00325
so part of: sequence
location: 65184..65260
location: region:65184-65260:1
so has part: feature:65184-65260:1:exon
subclass of: SO_0000663

position:65184:1
position: 65184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65260:1
position: 65260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65184-65260:1:exon

VCA1004_RS00325
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00325
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:65218..65220,aa:Ile,seq:gat)
SIO_010081: VCA1004_RS00325
subclass of: SO_0000673
so part of: VCA1004_RS00325
location: 65184..65260
location: region:65184-65260:1
so has part: feature:65184-65260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65184-65260:1:exon

VCA1004_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00330
so part of: sequence
location: 65296..65371
location: region:65296-65371:1
so has part: feature:65296-65371:1:exon
subclass of: SO_0000663

position:65296:1
position: 65296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65371:1
position: 65371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65296-65371:1:exon

VCA1004_RS00330
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00330
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:65329..65331,aa:Ala,seq:tgc)
SIO_010081: VCA1004_RS00330
subclass of: SO_0000673
so part of: VCA1004_RS00330
location: 65296..65371
location: region:65296-65371:1
so has part: feature:65296-65371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65296-65371:1:exon

VCA1004_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00335
so part of: sequence
location: 65680..68567
location: region:65680-68567:1
so has part: feature:65680-68567:1:exon
subclass of: SO_0000573

position:65680:1
position: 65680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68567:1
position: 68567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65680-68567:1:exon

VCA1004_RS00335
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
locus tag: VCA1004_RS00335
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00335
subclass of: SO_0000673
so part of: VCA1004_RS00335
location: 65680..68567
location: region:65680-68567:1
so has part: feature:65680-68567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65680-68567:1:exon

VCA1004_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS00340
so part of: sequence
location: 68699..68814
location: region:68699-68814:1
so has part: feature:68699-68814:1:exon
subclass of: SO_0000573

position:68699:1
position: 68699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68814:1
position: 68814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68699-68814:1:exon

VCA1004_RS00340
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS00340
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00340
subclass of: SO_0000673
so part of: VCA1004_RS00340
location: 68699..68814
location: region:68699-68814:1
so has part: feature:68699-68814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68699-68814:1:exon

VCA1004_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00345
so part of: sequence
location: 68877..68967
location: region:68877-68967:1
so has part: feature:68877-68967:1:exon
subclass of: SO_0000663

position:68877:1
position: 68877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68967:1
position: 68967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68877-68967:1:exon

VCA1004_RS00345
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00345
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:68911..68913,aa:Ser,seq:tga)
SIO_010081: VCA1004_RS00345
subclass of: SO_0000673
so part of: VCA1004_RS00345
location: 68877..68967
location: region:68877-68967:1
so has part: feature:68877-68967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68877-68967:1:exon

VCA1004_RS15150
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS15150
so part of: sequence
location: complement(69337..69474)
location: region:69337-69474:-1
so has part: feature:69337-69474:-1:exon
subclass of: SO_0000010

position:69337:-1
position: 69337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69474:-1
position: 69474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69337-69474:-1:exon

VCA1004_RS15150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS15150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLDLVNVTPQRGFELKKGRGLEQPRNNNNMEAMREHLNPIYSAP
SIO_010081: VCA1004_RS15150
subclass of: SO_0000673
so part of: VCA1004_RS15150
location: complement(69337..69474)
location: region:69337-69474:-1
so has part: feature:69337-69474:-1:exon

WP_164520805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69337-69474:-1:exon

VCA1004_RS15260
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS15260
pseudo: true
so part of: sequence
location: complement(<69434..>69538)
location: region:69434-69538:-1
so has part: feature:69434-69538:-1:exon
subclass of: SO_0000010

position:69434:-1
position: 69434
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:69538:-1
position: 69538
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69434-69538:-1:exon

VCA1004_RS15260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS15260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611669.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: VCA1004_RS15260
subclass of: SO_0000673
so part of: VCA1004_RS15260
location: complement(<69434..>69538)
location: region:69434-69538:-1
so has part: feature:69434-69538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69434-69538:-1:exon

VCA1004_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00350
so part of: sequence
location: complement(69737..70915)
location: region:69737-70915:-1
so has part: feature:69737-70915:-1:exon
subclass of: SO_0000010

position:69737:-1
position: 69737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70915:-1
position: 70915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69737-70915:-1:exon

VCA1004_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025723.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme biosynthesis HemY N-terminal domain-containing protein
translation: MFRLVFIFVVLGLGLFVGTQYSEQQGYVLISFANTTTEMSVTTLVIFIVATLAALFLLEFMIKKGLRATNATWNWFSVRKLKRARRYTNEGIIKLLEGDWKGAEKKVTRWANHHDMPLLCYLIASEAAQGMGDEAKRKKYLTLAEQQEGYSLAVEMTKIRQLVRNKQYADAHSQLEQLKGRYPNNTIVLNLLKKTYIGLELWSALDELLPKLKKAKLISQNEYDELFYQAQLGKMKEIAEQKGLDGLLAYWSQLPKKLKQDNHLVSLMVEQLILHQGDSEAYLILRDAIKQQPSPEILPLLTQLDLPDHHPVIVLLEGLVKKHPDNPEINSVLGQFYLREQKWSQAQKEFEIALTQRISIADYSFLADSLEKQNMKQAAGEVSRKALSLIEK
SIO_010081: VCA1004_RS00350
subclass of: SO_0000673
so part of: VCA1004_RS00350
location: complement(69737..70915)
location: region:69737-70915:-1
so has part: feature:69737-70915:-1:exon

WP_086981903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69737-70915:-1:exon

VCA1004_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00355
so part of: sequence
location: complement(70915..72012)
location: region:70915-72012:-1
so has part: feature:70915-72012:-1:exon
subclass of: SO_0000010

position:72012:-1
position: 72012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70915-72012:-1:exon

VCA1004_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00355
EC number: 2.1.1.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen-III C-methyltransferase
translation: MTDNHNKANEMTNDVSSSTPTDNKKNKGHKRASAAIIIALLVAGSVIAFEGYQYIQSQKTISQLQAQVTQLNAHVASQLEQNQSAIKKETSTLQHKLETQAEQQEKSIKSLQLAITDIKGRRPNDWLLAEADYLVKMAGRKLFLEHDVESATQLMISADQRIAALNDPSLVPLRKAMAADITQLKSLPIIDREGLILKLISLQRETDQLPLANSLLPKEEEQQPEVVSEDINDWKSNLMTSLKNFASHFITFRTRDGNATPLLSPTQHFYLKENVKAKLETAVKGVYAENNDLYQTALTVTQEWSKKYFNQQSIKVQKFQQEITQLQSKDITVEYPVKLESHKPLTDLISDRLRRSISSLEQGDK
SIO_010081: VCA1004_RS00355
subclass of: SO_0000673
so part of: VCA1004_RS00355
location: complement(70915..72012)
location: region:70915-72012:-1
so has part: feature:70915-72012:-1:exon

WP_086981904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70915-72012:-1:exon

VCA1004_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00360
so part of: sequence
location: complement(72002..72760)
location: region:72002-72760:-1
so has part: feature:72002-72760:-1:exon
subclass of: SO_0000010

position:72002:-1
position: 72002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72760:-1
position: 72760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72002-72760:-1:exon

VCA1004_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00360
EC number: 4.2.1.75
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004393915.1
GO function: GO:0004852 - uroporphyrinogen-III synthase activity [Evidence IEA]
GO process: GO:0006780 - uroporphyrinogen III biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen-III synthase
translation: MSVLVTRPGKDGEALCHSLQQHNIPSIHHPLIELRQGQDSPQLVSALSQCDLVIAVSQHAVHWAWQELQQHHQPFPSHLRYFAIGEKTAQLLHQFTQQEVLSPQISDSEHLLDLPALKLVKNQRILILRGNGGRELIHHTLQARGAMVEYNEIYRRVPLPINKHNTWEQWKMHGVSHLVITSGEQLAFFMSQVPKSYLSWVTQLTLYVPSQRIYQQAEHFEFSHIINTGSAANPVLLDYLSKTYVTGKRYDR
SIO_010081: VCA1004_RS00360
subclass of: SO_0000673
so part of: VCA1004_RS00360
location: complement(72002..72760)
location: region:72002-72760:-1
so has part: feature:72002-72760:-1:exon

WP_086981905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72002-72760:-1:exon

VCA1004_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: hemC
locus tag: VCA1004_RS00365
so part of: sequence
location: complement(72760..73698)
location: region:72760-73698:-1
so has part: feature:72760-73698:-1:exon
subclass of: SO_0000010

position:73698:-1
position: 73698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72760-73698:-1:exon

VCA1004_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: hemC
locus tag: VCA1004_RS00365
EC number: 2.5.1.61
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020433069.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxymethylbilane synthase
translation: MSTTPIRIATRKSPLALWQAHFVKDALQQAHPGLEVELVTMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGQADLAVHSMKDVPVDFPEGLGLVTICERGDPRDAFVSNTYNNVDELPHGSIVGTCSLRRQCQLKERRPDLIIKELRGNVGTRLGKLDAGEFDAIVLAAAGLKRLNLEERIRSFIEPEESLPAVGQGAVGIECRLDDHRLRELLLPLNDIETSDRVLCERAMNLTLQGGCQVPIGSYAVLDGENIWLRGLVGEPDGSKIIRGEIKGLRKDAEQLGIQLANQLLGDGAKQILENLYSEHSE
SIO_010081: VCA1004_RS00365
subclass of: SO_0000673
so part of: VCA1004_RS00365
location: complement(72760..73698)
location: region:72760-73698:-1
so has part: feature:72760-73698:-1:exon

WP_086981906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72760-73698:-1:exon

VCA1004_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00370
so part of: sequence
location: 73967..76501
location: region:73967-76501:1
so has part: feature:73967-76501:1:exon
subclass of: SO_0000010

position:73967:1
position: 73967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76501:1
position: 76501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73967-76501:1:exon

VCA1004_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00370
EC number: 4.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004740461.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I adenylate cyclase
translation: MQAYTAVLVDRLDKLNQQRVERALSIMDSQSQQVFHLIPVLLHFNHPALPGFNSSAPFGICDFSLNQIQLQVIQDFDDNVELCSLVQPMTAPAQILALYTMGSTSSVGQSSSSDLDIWVCVSPEMPQVDRTHLVNKCLLITEWAKSRGVEANFFLMDETRFRTNQSEEMTGDNCGSSQHLLLLDEFYRSAVRLAGQRLLWQIVPPEMEECYDEYVQKLCSSGYIDCSQWIDFGQLHHIPAEEYFGSNLWQLYKSIDSPYKSVLKAILLESYSWEYPHPQLLSVDTKRRFFACEQKEYGMDSYYLMLQKVTQYLERIGDSRRLELVRRCFYLKTHVKLSRQPGPNTVSWRYSALQELVASWGWSDEVIETLDNRRHWKVELVKKVHHELLDALMLSYRNLIQFARRHDITSAISPQDISILARKLYAAFEILPGKVTLLNTQISPDLHESNLTFIQVPEGRINQAGWYLYKQSLNPYDIIGRAPLEHNQYLSKLVAWGFFNGLITEATHLEAVVRDADLDIDKLYQMVSDLRNTFSLRKRQPTMQALASPCEVNQLSIFINLESDPTAKLLPQQLKADSKANVDVFSFSEKQQCLVSSVDLVYRNSWHEVRTLHFSGETSIIDALKTILGKMHQDALPPESIDVFCYSEHMRGMMRNMVYQLLAECIELRLKPVENDKRRRFKVLKVANQMYGLFFERRGVSVMKLENSIDFYSSISTNKLQGAPLLKVGTNQELPPPDIVDAYASEGLIQFFFEGDDDGFNIYVLDENNHVEVYRQFDGCRDDMIRTVNRFYTNNIQESGSDSQCNFNLPQYYQIIHPDNGESYVVPYRSNSMNSASHQEMSVK
SIO_010081: VCA1004_RS00370
subclass of: SO_0000673
so part of: VCA1004_RS00370
location: 73967..76501
location: region:73967-76501:1
so has part: feature:73967-76501:1:exon

WP_086981907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73967-76501:1:exon

VCA1004_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fadA
locus tag: VCA1004_RS00375
so part of: sequence
location: complement(76630..77796)
location: region:76630-77796:-1
so has part: feature:76630-77796:-1:exon
subclass of: SO_0000010

position:76630:-1
position: 76630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77796:-1
position: 77796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76630-77796:-1:exon

VCA1004_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fadA
locus tag: VCA1004_RS00375
EC number: 2.3.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004400174.1
GO function: GO:0003988 - acetyl-CoA C-acyltransferase activity [Evidence IEA]
GO process: GO:0009062 - fatty acid catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA C-acyltransferase FadA
translation: MNNVVIVDCIRTPMGRSKAGAFRHVRAEDLSAHLMKGLLKRNPKLDPTQIEDVYWGCVQQTLEQGFNIARNASLLAGIPKNVGAVTVNRLCGSSMQALHDASRAIMVGDAEICLIGGVEHMGHVPMNHGVDFHPGLAKNIAKAAGMMGLTAEMLGKLHGITRQAQDEFGARSHQRAHAATLEGRFKNEILATEGHNADGSLQLFDFDEVIRPETTVESLSQLRPVFDPAHGTVTAGTSSALSDGASAMLIMSENKAKALGLPIRARIRAMAVAGCDPSTMGYGPVPATQKALQRAGLSIQDMGMIELNEAFAAQALPCAKDLGLLDVMDEKVNLNGGAIALGHPLGCSGARISTTLINLMETKDVEFGLATMCIGLGQGIATVFERVE
SIO_010081: VCA1004_RS00375
subclass of: SO_0000673
so part of: VCA1004_RS00375
location: complement(76630..77796)
location: region:76630-77796:-1
so has part: feature:76630-77796:-1:exon

WP_086981908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76630-77796:-1:exon

VCA1004_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fadB
locus tag: VCA1004_RS00380
so part of: sequence
location: complement(77821..79986)
location: region:77821-79986:-1
so has part: feature:77821-79986:-1:exon
subclass of: SO_0000010

position:77821:-1
position: 77821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79986:-1
position: 79986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77821-79986:-1:exon

VCA1004_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fadB
locus tag: VCA1004_RS00380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014230439.1
GO function: GO:0003857 - 3-hydroxyacyl-CoA dehydrogenase activity [Evidence IEA]; GO:0008692 - 3-hydroxybutyryl-CoA epimerase activity [Evidence IEA]; GO:0004165 - delta(3)-delta(2)-enoyl-CoA isomerase activity [Evidence IEA]; GO:0004300 - enoyl-CoA hydratase activity [Evidence IEA]
GO process: GO:0009062 - fatty acid catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fatty acid oxidation complex subunit alpha FadB
translation: MIYQHTALHVKELQDGIVQLTFSENASVNTLGSDALKALDEALDAIKSQPNVTGLILNSDKDSFIAGANIKEFLGLFAQPIEELKHWIKYANDIFCKLEDLPFPTLSVIKGFALGGGCELILSTDLRIGDHTALIGLPETKLGIIPGFGGTVRLPRLIGADNAMEMIATAKLQKADEALKLGLLDAIVSSDQLESSALLTMQQAQSGHIDWQARRQQKMAPLPLSKVEALMSFTTAKGMISAKAGPHYPAPIASVKAIEEAATFERDGALEIERNSFAHVAKSDTAQALIGLFLNDQYIKAIAKKATKEATKTQRAAVLGAGIMGGGIAYQSASKGIPVLMKDIAQSSLDLGMNEASKLLNKQLERGKIDGFKLAKVLAAITPSLHYSGIEQADIIVEAVVENPKVKAAVLAEVEQHAKQGAIIASNTSTIPINQLAKAVKHPENFCGMHFFNPVHRMPLVEIIRGEHTSEDTINKVVAYAAQMGKSPIVVNDCPGFFVNRVLFPYFGGFSLLMRDGADFTQIDKVMERQFGWPMGPAYLLDVVGIDTAHHAQEVMAQGFPERMGKQGKDAIDVLYHAQKYGQKNGHGFYTYTLDKKGKPTKTFDPSILTLLKEVTADSKTFSDEDIINRTMIPMINEVVLCLEESIIASPQEADMALIYGLGFPPFRGGVFRYLDSIGLNNYIQTASQFSELGPMYRVPQLLIEMAEKGETFYSNQSTSI
SIO_010081: VCA1004_RS00380
subclass of: SO_0000673
so part of: VCA1004_RS00380
location: complement(77821..79986)
location: region:77821-79986:-1
so has part: feature:77821-79986:-1:exon

WP_086981909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77821-79986:-1:exon

VCA1004_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00385
so part of: sequence
location: 80198..80851
location: region:80198-80851:1
so has part: feature:80198-80851:1:exon
subclass of: SO_0000010

position:80198:1
position: 80198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80851:1
position: 80851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80198-80851:1:exon

VCA1004_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006713811.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YigZ family protein
translation: MSDQPYLIPRENVVFEEEIKKSVFITQLAHTPSIDSAKQFIEHVKAQHASARHNCWGFVAGRPNDSLLWGFSDDGEPSGTAGKPILAQLSGSGVGEMTAVVTRYSGGIKLGTGGLVKAYGGGVQQALKQLQTIEKKIMTQLQLRLDYPLMPLVQSILGQFHTQQLDAQFDSEVVLLIEVDKREENLFTQTLINKSGAKVLIQEMSVRSSNNTRNVEA
SIO_010081: VCA1004_RS00385
subclass of: SO_0000673
so part of: VCA1004_RS00385
location: 80198..80851
location: region:80198-80851:1
so has part: feature:80198-80851:1:exon

WP_086981910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80198-80851:1:exon

VCA1004_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00390
so part of: sequence
location: 80865..82322
location: region:80865-82322:1
so has part: feature:80865-82322:1:exon
subclass of: SO_0000010

position:80865:1
position: 80865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82322:1
position: 82322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80865-82322:1:exon

VCA1004_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004736668.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrkH family potassium uptake protein
translation: MQFRSIIRIIGLLLALFSVSMLAPALVALIYRDGAGVPFVTTFFVLLLCGGICWFPNRDKKSDLKARDGFLIVVLFWTVIGSAGALPLWLSPNPDVSVTDAFFESFSALTTTGATTIVGLDHLPKAILFYRQFLQWFGGMGIIVLAVAILPILGIGGMQLYRAEIPGPVKDSKMTPRIAETAKVLWYIYLSLTIACALAFWLAGMSVFDAICHSFSTIAIGGFSTHDASMGYFNSPVINMITVVFLLISACNFSLHFAVFASGGVHPKYYWRDPEFRAFITIQVLLFLLCFFILLSHNNDLTTFETFDQVLFQTVSISTTAGFTTTGFSQWPLFLPVLLLFSSFIGGCAGSTGGGLKVIRVLLLTLQGGRELKRLVHPRAVFPIKIGDKALPQRVVDAVWGFFSAYALVFVLCMLGLIATGMDELSAFSAIAATLNNLGPGLGDVSVHFANVNDAAKWVLIISMLFGRLEVFTLLILFTPTFWKS
SIO_010081: VCA1004_RS00390
subclass of: SO_0000673
so part of: VCA1004_RS00390
location: 80865..82322
location: region:80865-82322:1
so has part: feature:80865-82322:1:exon

WP_086981911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80865-82322:1:exon

VCA1004_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: hemG
locus tag: VCA1004_RS00395
so part of: sequence
location: 82323..82853
location: region:82323-82853:1
so has part: feature:82323-82853:1:exon
subclass of: SO_0000010

position:82323:1
position: 82323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82853:1
position: 82853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82323-82853:1:exon

VCA1004_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: hemG
locus tag: VCA1004_RS00395
EC number: 1.3.5.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004400169.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: menaquinone-dependent protoporphyrinogen IX dehydrogenase
translation: MHEKKYLILYSTQEGQTYKIAQYMAQELGESHCNLINLHEAHTVDFGLYHTLIIGASIRYGRFNKKLYRFIDRHLAQLNAADAYFYSVNLTARKEGKDTPEGSVYIQTFLKKSPWKPKKIGVFAGALLYPRYSWFDRMMIQLIMRMTKGETDTSKEVEYTNWEKVTQFTKSIEKSL
SIO_010081: VCA1004_RS00395
subclass of: SO_0000673
so part of: VCA1004_RS00395
location: 82323..82853
location: region:82323-82853:1
so has part: feature:82323-82853:1:exon

WP_086981912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82323-82853:1:exon

VCA1004_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00400
so part of: sequence
location: 83422..84964
location: region:83422-84964:1
so has part: feature:83422-84964:1:exon
subclass of: SO_0000573

position:83422:1
position: 83422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84964:1
position: 84964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83422-84964:1:exon

VCA1004_RS00400
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
locus tag: VCA1004_RS00400
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00400
subclass of: SO_0000673
so part of: VCA1004_RS00400
location: 83422..84964
location: region:83422-84964:1
so has part: feature:83422-84964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83422-84964:1:exon

VCA1004_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00405
so part of: sequence
location: 85375..88262
location: region:85375-88262:1
so has part: feature:85375-88262:1:exon
subclass of: SO_0000573

position:85375:1
position: 85375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88262:1
position: 88262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85375-88262:1:exon

VCA1004_RS00405
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
locus tag: VCA1004_RS00405
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00405
subclass of: SO_0000673
so part of: VCA1004_RS00405
location: 85375..88262
location: region:85375-88262:1
so has part: feature:85375-88262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85375-88262:1:exon

VCA1004_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS00410
so part of: sequence
location: 88394..88509
location: region:88394-88509:1
so has part: feature:88394-88509:1:exon
subclass of: SO_0000573

position:88394:1
position: 88394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88509:1
position: 88509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88394-88509:1:exon

VCA1004_RS00410
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS00410
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00410
subclass of: SO_0000673
so part of: VCA1004_RS00410
location: 88394..88509
location: region:88394-88509:1
so has part: feature:88394-88509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88394-88509:1:exon

VCA1004_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00415
so part of: sequence
location: 88576..88652
location: region:88576-88652:1
so has part: feature:88576-88652:1:exon
subclass of: SO_0000663

position:88576:1
position: 88576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88652:1
position: 88652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88576-88652:1:exon

VCA1004_RS00415
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00415
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:88610..88612,aa:Asp,seq:gtc)
SIO_010081: VCA1004_RS00415
subclass of: SO_0000673
so part of: VCA1004_RS00415
location: 88576..88652
location: region:88576-88652:1
so has part: feature:88576-88652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88576-88652:1:exon

VCA1004_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: crcB
locus tag: VCA1004_RS00420
so part of: sequence
location: 89135..89518
location: region:89135-89518:1
so has part: feature:89135-89518:1:exon
subclass of: SO_0000010

position:89135:1
position: 89135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89518:1
position: 89518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89135-89518:1:exon

VCA1004_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: crcB
locus tag: VCA1004_RS00420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004745345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fluoride efflux transporter CrcB
translation: MGQLVILGYIALGGAFGACSRYLVSELCVYLLGKGFPYGTLAVNVVGSAIMGLLMAALQNEMISASPWRFIIGLGFLGALTTFSTFSMDNVLLMQQGAFFKMGLNVFLNVFLSISAAWVGFHLLIKN
SIO_010081: VCA1004_RS00420
subclass of: SO_0000673
so part of: VCA1004_RS00420
location: 89135..89518
location: region:89135-89518:1
so has part: feature:89135-89518:1:exon

WP_086981913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89135-89518:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1891186
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00059
inference: COORDINATES: profile:INFERNAL:1.1.1
note: TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: thiamine pyrophosphate
so part of: sequence
location: 89565..89662
location: region:89565-89662:1
so has part: feature:89565-89662:1:region

position:89565:1
position: 89565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89662:1
position: 89662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89565-89662:1:region

VCA1004_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: thiC
locus tag: VCA1004_RS00425
so part of: sequence
location: 89781..91769
location: region:89781-91769:1
so has part: feature:89781-91769:1:exon
subclass of: SO_0000010

position:89781:1
position: 89781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91769:1
position: 91769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89781-91769:1:exon

VCA1004_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: thiC
locus tag: VCA1004_RS00425
EC number: 4.1.99.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006957532.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphomethylpyrimidine synthase ThiC
translation: MSSSRKQARMAAKNFIDSLSVQPYPNSQKVYIEGSRPDLRVPMRQISLADSLIGGSKDKPVFEPNEPIQVYDTSGVYTDPNYEINLYEGLPKLRERWIEERHDTEYLKAVSSSFTQQRLNDETLDDLRYGNLPHVRKAKTGQCVTQLHYARKGIITPEMEFIAIRENMGRQKFADEQLNQQHLGQNFGAHLPKEITPEFVRREVAEGRAIIPANINHPESEPMIIGRNFLIKVNANIGNSSVSSSIEEEVEKLVWSTRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGIAENLTWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPLTAKRVTGIVSRGGSIIAKWCLAHHQESFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTKVAWEYDVQVMIEGPGHVPMHMIKENMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAGDLAKGHPGAQIRDNALSKARFEFRWHDQFNLSLDPETALAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKDTEQVAADQAIEIKMLDDPLEGMKQKSAEFLASGSELYHPAVTGIDEETSHSGEQQEAVHESN
SIO_010081: VCA1004_RS00425
subclass of: SO_0000673
so part of: VCA1004_RS00425
location: 89781..91769
location: region:89781-91769:1
so has part: feature:89781-91769:1:exon

WP_086981914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89781-91769:1:exon

VCA1004_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: thiE
locus tag: VCA1004_RS00430
so part of: sequence
location: 91756..92973
location: region:91756-92973:1
so has part: feature:91756-92973:1:exon
subclass of: SO_0000010

position:91756:1
position: 91756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92973:1
position: 92973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91756-92973:1:exon

VCA1004_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: thiE
locus tag: VCA1004_RS00430
EC number: 2.5.1.3
inference: COORDINATES: protein motif:HMM:NF002904.0
GO function: GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine phosphate synthase
translation: MNRIELCVEAHDLLATQLQACFLAAQEVGLAPLSLTIAHNIDSNLFACQVVTEDNRYYIQPQFTGDTSITGEFDIAIRYGVKPANCEGDDSKVAHLYIGVAGSDKYLDICRFADGRTVKVAQKQGIDKANYLRHYCWFLTAIAQGFPVEDALVIARLALKHIDVSRETWPSDPLSFQELSTLEPQMNGLFPNIQREEMKLYPVVSSLAWLETLLQRGIKTLQLRIKEGSEKDIELAITKAILLGRQFKAQLFINDYWQLAIKHGAYGVHLGQEDLIDADLQAINQAGLRLGISTHGYYELLRATQYKPSYIALGHIFATTTKQMPSKPQGVTKLGLYQQCVGSRYPTVAIGGIDLDNAQQVWQTGVSSLAVVRAITLADDIQLAIDSFYQVMTPERVEPQLVLSE
SIO_010081: VCA1004_RS00430
subclass of: SO_0000673
so part of: VCA1004_RS00430
location: 91756..92973
location: region:91756-92973:1
so has part: feature:91756-92973:1:exon

WP_164520806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91756-92973:1:exon

VCA1004_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00435
so part of: sequence
location: 93002..93748
location: region:93002-93748:1
so has part: feature:93002-93748:1:exon
subclass of: SO_0000010

position:93002:1
position: 93002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93748:1
position: 93748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93002-93748:1:exon

VCA1004_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006713150.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HesA/MoeB/ThiF family protein
translation: MNDQQFQRYQRQIMVLEVSEKGQQALMASKVLLVGCGGLGSAASLYLAAAGVGSLVVADGDAVETSNLQRQVVYRDSDLGKNKAQAMAEQLKQLNPNCKVRSVSTFLQDAQLNLEVMLADVVLDCSDNFPTRQAVNQACQQSKTTLISGSAIGWVGQLMSFDFKKQPSPCYHCAVPYQDNSAGLKCSESGVIGPVVGTLGNLQALEAIKYLTGNEKFKPAVFNLFDGQNLAWQRFNIAKAPNCPVCGS
SIO_010081: VCA1004_RS00435
subclass of: SO_0000673
so part of: VCA1004_RS00435
location: 93002..93748
location: region:93002-93748:1
so has part: feature:93002-93748:1:exon

WP_086981916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93002-93748:1:exon

VCA1004_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: thiS
locus tag: VCA1004_RS00440
so part of: sequence
location: 93792..93995
location: region:93792-93995:1
so has part: feature:93792-93995:1:exon
subclass of: SO_0000010

position:93792:1
position: 93792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93995:1
position: 93995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93792-93995:1:exon

VCA1004_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: thiS
locus tag: VCA1004_RS00440
inference: COORDINATES: protein motif:HMM:TIGR01683.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfur carrier protein ThiS
translation: MQVTVNQQVTSITNDQIILEQFLLSLAIEEQKIAVAINQDIIPKSAWPSTTLKQGDDVAIFTMIAGG
SIO_010081: VCA1004_RS00440
subclass of: SO_0000673
so part of: VCA1004_RS00440
location: 93792..93995
location: region:93792-93995:1
so has part: feature:93792-93995:1:exon

WP_086981917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93792-93995:1:exon

VCA1004_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00445
so part of: sequence
location: 94000..94782
location: region:94000-94782:1
so has part: feature:94000-94782:1:exon
subclass of: SO_0000010

position:94000:1
position: 94000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94782:1
position: 94782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94000-94782:1:exon

VCA1004_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiazole synthase
translation: MNHLSSDPLVIGDKTFQSRLFTGTGKFANSKLMLESLQASGSQLTTLALKRIDLQHQNDDILRPLQQSNIQLLPNTSGAKTAKEAIFAAQLARELLETNWVKLEIHPDPRYLMPDPIETLTAAEKLVELGFIVLPYCHADPVLCKRLEEVGCAAVMPLGAPIGSNKGLASQDFLKIIIEQANVPVVVDAGIGAPSHAAYAMELGADAVLVNTAMASSPHPMQMAAAFKQAVQAGRLAHLAGLGVRHSQASATSPLTSFLE
SIO_010081: VCA1004_RS00445
subclass of: SO_0000673
so part of: VCA1004_RS00445
location: 94000..94782
location: region:94000-94782:1
so has part: feature:94000-94782:1:exon

WP_086981918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94000-94782:1:exon

VCA1004_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: thiH
locus tag: VCA1004_RS00450
so part of: sequence
location: 94789..95901
location: region:94789-95901:1
so has part: feature:94789-95901:1:exon
subclass of: SO_0000010

position:94789:1
position: 94789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95901:1
position: 95901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94789-95901:1:exon

VCA1004_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: thiH
locus tag: VCA1004_RS00450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017110613.1
GO function: GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-iminoacetate synthase ThiH
translation: MTFSQIFNTLNWDDVALSIHSKTAQDVELALSKERLDLDDFAALISSAAEPYIESMAQKSYALTRQRFGHNIGLYIPLYLSNLCANACTYCGFSMENKIKRRTLNRMEIEDEVQAIKAMKFDSILLVTGEHETKVGMNYFRAMLPTIKSQFSYLAMEVQPLDQAEYAELKTLGLDAVMVYQETYHPRTYAKHHLRGNKQDFYYRLETPDRVAAAGIDKIGIGALIGLEDWRTDCFFTATHLKYLEKQYWQTRYSISFPRLRPCAGAMQPKSVMTDKQLVQLICAFRLLSPEVELSLSTREQASFRDNVLPLGITHISAASKTQPGGYANGEVELEQFEISDERTAEQVVQGLKQKGYEAVWTDWHPAYSG
SIO_010081: VCA1004_RS00450
subclass of: SO_0000673
so part of: VCA1004_RS00450
location: 94789..95901
location: region:94789-95901:1
so has part: feature:94789-95901:1:exon

WP_086981919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94789-95901:1:exon

VCA1004_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00455
so part of: sequence
location: complement(95999..97780)
location: region:95999-97780:-1
so has part: feature:95999-97780:-1:exon
subclass of: SO_0000010

position:95999:-1
position: 95999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97780:-1
position: 97780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95999-97780:-1:exon

VCA1004_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00455
EC number: 3.4.11.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024372.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminopeptidase P family protein
translation: MQKDISQRIQQLREWLIQNQFDAIIIPHEDEFLGEYIPEHNERLAWITGFAGSAGAAVITQDQAAMFVDGRYTVQVTKQVPSHIFSYHHLIQEPPLQWIKNNLNEGSRLAIDTRMHSATWFDSAQDCLSETISIVTIDQNPIDLLWQDRPQPFESPIRLMPLETVGQSSTDKRHEIAQIISQKNADAVLLTQIDSICWLLNMRGLDVPRLPAVLCHAILHQDASVELFLNPQRIPTAFTQHVGEQVSVLDTDQLASSLHSLQGKKVLVDLNSSNAWFSQQLTAAGAIIVADSDPCLLPKAVKNSVEAQGMINCHVRDGAAMAKFLCWIDEEVAAGRLHNEDELAEKLHDCRRQDTSLADLSFDTISAAGSNAAMCHYNHADQAEFGTLEMNSLYLVDSGGQYPDGTTDITRTVAIGEPSAFMKQQFTLVLKGHIALATARFPTGTTGSQLDVLARQYLWAQGYNYDHGTGHGVGHFLSVHEGPQRISPAYNGVALQAGMVLSNEPGYYRANEFGIRIENLELVTEQATQGDFSVLGFESLTRCPIDVRAIDASLLTTAEKAWLNDYHQKVWNEVSPLVEGKVKHWLQQATQAI
SIO_010081: VCA1004_RS00455
subclass of: SO_0000673
so part of: VCA1004_RS00455
location: complement(95999..97780)
location: region:95999-97780:-1
so has part: feature:95999-97780:-1:exon

WP_086981920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95999-97780:-1:exon

VCA1004_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00460
so part of: sequence
location: 98126..98413
location: region:98126-98413:1
so has part: feature:98126-98413:1:exon
subclass of: SO_0000010

position:98126:1
position: 98126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98413:1
position: 98413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98126-98413:1:exon

VCA1004_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLTTYEMARILEQLDESPEKVMFGKLLTELGNQSQERIRSAAKQVPLDVLRDIIYQFQVIADSRKGEQVQLLAEKLKAQGLSVEDLQRYMEKNK
SIO_010081: VCA1004_RS00460
subclass of: SO_0000673
so part of: VCA1004_RS00460
location: 98126..98413
location: region:98126-98413:1
so has part: feature:98126-98413:1:exon

WP_086981921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98126-98413:1:exon

VCA1004_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00465
so part of: sequence
location: complement(98439..99341)
location: region:98439-99341:-1
so has part: feature:98439-99341:-1:exon
subclass of: SO_0000010

position:98439:-1
position: 98439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99341:-1
position: 99341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98439-99341:-1:exon

VCA1004_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024374.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MKTPANTERSALLFGLAAVLLWSTVATAFKITLSEFTPGQMLFVASVVSVLVLSVICALKGTLRQLTTIFLSNPLYFLLLGLINPFAYYLILFKAYDLLPASQAQPLNYSWAITLTLMAAVFLGQKIRKQDWLACALGYLGVLVIATKGDLLALSFESPLGVGLALLSTLLWASYWILNAKNKADPIIVVLLGFMVSLPFSATLVWYEGIQWATISMKGWIAVSYVGLFEMGITFVLWLTALKKTSNTAKVSNLIFLSPFISLILLSQILGEIIYPSTIIGLILILSGLIVQQIKWNNKS
SIO_010081: VCA1004_RS00465
subclass of: SO_0000673
so part of: VCA1004_RS00465
location: complement(98439..99341)
location: region:98439-99341:-1
so has part: feature:98439-99341:-1:exon

WP_086981922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98439-99341:-1:exon

VCA1004_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rmuC
locus tag: VCA1004_RS00470
so part of: sequence
location: 99436..100941
location: region:99436-100941:1
so has part: feature:99436-100941:1:exon
subclass of: SO_0000010

position:99436:1
position: 99436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100941:1
position: 100941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99436-100941:1:exon

VCA1004_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rmuC
locus tag: VCA1004_RS00470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017040771.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA recombination protein RmuC
translation: MQWIINHSELVWSFLIVIVILMGGAQFWIRSRYQHQLTLLQQQHTSELQRYSENIHQLQTQNQQLQQELDQLDIERDKSEFEARNNFGQLMAANERLKHFEQLQQERHQLQTRQEQLMADYHELQSQLREQQAKHDEEKRSNQEKLRLLEQAEQRLKVEFESLANQLFETKVKSVDEQNKQSLAGLLNPLKEQLQGFKQQVSDSYYAEAKERHTLVHEIKQLQRLNEQMAQDAVNLTQALKGDNKQQGNWGEVVLANVLQDSGLREGHEYQTQVSLNHESGKRYQPDVIVNLPEEKQVVVDSKMTLVAFERYFNAENDEQKAKALNDHLISVRNHIKQLSQKDYHRLNGITSLDYVLMFIPIEPAFQLAVERDPSLIRDAMEQNIIVVSPTTLLVALRTINNLWRNERQNQNAKLIAERASKLYDKMRLFIDDMEGIGQSLTRAQNAYQGAMNKLSTGRGNLIRQAESFKSLGVEVKKNIRHEITQNDLDNNRQAVEDKVN
SIO_010081: VCA1004_RS00470
subclass of: SO_0000673
so part of: VCA1004_RS00470
location: 99436..100941
location: region:99436-100941:1
so has part: feature:99436-100941:1:exon

WP_086981923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99436-100941:1:exon

VCA1004_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ubiE
locus tag: VCA1004_RS00475
so part of: sequence
location: 100992..101774
location: region:100992-101774:1
so has part: feature:100992-101774:1:exon
subclass of: SO_0000010

position:100992:1
position: 100992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101774:1
position: 101774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100992-101774:1:exon

VCA1004_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ubiE
locus tag: VCA1004_RS00475
EC number: 2.1.1.163
EC number: 2.1.1.201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012551397.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
translation: MTDKLAQADQTKSQDDTTHFGFSTVAKEKKVEKVAEVFHSVAAKYDIMNDLMSGGIHRLWKRFTIDCSGVRPGHKVLDLAGGTGDLTAKFSRIVGDNGEVILADINNSMLNVGRDKLRDIGIVGNVHYVQANAEELPFPDDYFDCITISFGLRNVTDKDKALRSMFRVLKPGGRLLVLEFSKPRFDVLSKVYDLYSFHLLPRIGEVVANDADSYRYLAESIRMHPDQETLKGMMEEAGFEQTKYFDLTGGIVALHRGYKF
SIO_010081: VCA1004_RS00475
subclass of: SO_0000673
so part of: VCA1004_RS00475
location: 100992..101774
location: region:100992-101774:1
so has part: feature:100992-101774:1:exon

WP_086981924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100992-101774:1:exon

VCA1004_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00480
so part of: sequence
location: 101784..102389
location: region:101784-102389:1
so has part: feature:101784-102389:1:exon
subclass of: SO_0000010

position:101784:1
position: 101784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102389:1
position: 102389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101784-102389:1:exon

VCA1004_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017420527.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCP2 domain-containing protein
translation: MPFEPLVTGAIETVLNRLIQDNPSHQQQVLRLKGKVIAVHVQELERQLIFVFSHQVDVLSRYEGEADCYLSLKLSVLPELKDQSNITRLIKQDKLVLEGDIQLAQKFSQLIADIKPDPEEWLSRVTGDVVAHTVVQGAHQPLQWLKTGCQQQQKKIATILTEEWKIAPNPLEVAYFCDQVDELAGQLGMLEQRIDQLVGKA
SIO_010081: VCA1004_RS00480
subclass of: SO_0000673
so part of: VCA1004_RS00480
location: 101784..102389
location: region:101784-102389:1
so has part: feature:101784-102389:1:exon

WP_086981925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101784-102389:1:exon

VCA1004_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ubiB
locus tag: VCA1004_RS00485
so part of: sequence
location: 102386..104029
location: region:102386-104029:1
so has part: feature:102386-104029:1:exon
subclass of: SO_0000010

position:102386:1
position: 102386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104029:1
position: 104029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102386-104029:1:exon

VCA1004_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ubiB
locus tag: VCA1004_RS00485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024378.1
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ubiquinone biosynthesis regulatory protein kinase UbiB
translation: MTFRELKRLYKIIQIQLEYGLDELLPEHELTKLPRLGLKSLFWIRKKHQEKEVGDRLRLALQELGPVWIKFGQMMSTRRDLFPDYIADPLALLQDKVSPFDGHLAKAQIEKSLGGPVEQWFDDFDIEPLASASIAQVHTAKVKDTGQEVVLKVIRPDIRPVIEADLKLMHRLARMVARFMPDARRLKPVEVVKEYERTLLSELDLRMEAANALQLRRNFSGSKDLYVPDVYMDFSSEHLMVSERIYGIQVSDREGLANNGTNMKRLAEKGVSVFFTQVFRDSFFHADMHPGNVFVAWDSPEDPLWIGLDCGIVGTLNNEDKRYLAENFLAFFNRDYRRVAELHVDSGWVPADTNIIDFESAIRTVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLYPQLDLWETAKPFLENWMMEQVGPKAVLNAIKDKAPLWVEKLPELPELLYETLKRGRDLDQNVARYFALYSAGKRKQSTGKFLFGVGATLIVSSTILQLSATGWHHQLSCGFALIGCVFWLASWRTYRN
SIO_010081: VCA1004_RS00485
subclass of: SO_0000673
so part of: VCA1004_RS00485
location: 102386..104029
location: region:102386-104029:1
so has part: feature:102386-104029:1:exon

WP_086981926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102386-104029:1:exon

VCA1004_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tatA
locus tag: VCA1004_RS00490
so part of: sequence
location: 104086..104337
location: region:104086-104337:1
so has part: feature:104086-104337:1:exon
subclass of: SO_0000010

position:104086:1
position: 104086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104337:1
position: 104337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104086-104337:1:exon

VCA1004_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tatA
locus tag: VCA1004_RS00490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024379.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sec-independent protein translocase subunit TatA
translation: MGGISIWQLLIIAVIVVLLFGTKKLRGIGGDLGSAVKGFKEAMGDDKDKPATKDADFDAKSLNQNNVDSSVETAETKKDKEQG
SIO_010081: VCA1004_RS00490
subclass of: SO_0000673
so part of: VCA1004_RS00490
location: 104086..104337
location: region:104086-104337:1
so has part: feature:104086-104337:1:exon

WP_086981927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104086-104337:1:exon

VCA1004_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tatB
locus tag: VCA1004_RS00495
so part of: sequence
location: 104341..104778
location: region:104341-104778:1
so has part: feature:104341-104778:1:exon
subclass of: SO_0000010

position:104341:1
position: 104341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104778:1
position: 104778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104341-104778:1:exon

VCA1004_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tatB
locus tag: VCA1004_RS00495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004409704.1
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sec-independent protein translocase protein TatB
translation: MFDIGFWELVLISVVALVVLGPERLPVAIRSVSKFVRTAKTMANTVKDELSQELKIQELQDNLRKAEQMGMKNLSPELQSSIDALKKAAQDVQRPYAKDATENEQQEASPAEQMPASSDEVVNENTIMKPESPSESLSSSTDKKA
SIO_010081: VCA1004_RS00495
subclass of: SO_0000673
so part of: VCA1004_RS00495
location: 104341..104778
location: region:104341-104778:1
so has part: feature:104341-104778:1:exon

WP_086981928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104341-104778:1:exon

VCA1004_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tatC
locus tag: VCA1004_RS00500
so part of: sequence
location: 104847..105602
location: region:104847-105602:1
so has part: feature:104847-105602:1:exon
subclass of: SO_0000010

position:104847:1
position: 104847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105602:1
position: 105602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104847-105602:1:exon

VCA1004_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tatC
locus tag: VCA1004_RS00500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017034618.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin-arginine translocase subunit TatC
translation: MSSQEETQPLITHLIELRNRILKALVSVLAVFICLVWFSSNIYEFVSAPLIDRLPEGATMIATDVASPFFTPLKLTLVASVFVAVPLVLYQIWAFVAPGLYKHERRLIAPLLFSSSLLFYCGVAFAYFVVFPLIFSFFTAISLGGVQFATDISSYLDFVLSLFMAFGIAFEVPVAIILLCWTGATDAKSLAEKRPYIIVIAFVVGMLLTPPDMVSQTLLAVPMCILFEIGLFFSRFYAKRGEEEESSDSEA
SIO_010081: VCA1004_RS00500
subclass of: SO_0000673
so part of: VCA1004_RS00500
location: 104847..105602
location: region:104847-105602:1
so has part: feature:104847-105602:1:exon

WP_086981929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104847-105602:1:exon

VCA1004_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00505
so part of: sequence
location: complement(105672..106436)
location: region:105672-106436:-1
so has part: feature:105672-106436:-1:exon
subclass of: SO_0000010

position:105672:-1
position: 105672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106436:-1
position: 106436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105672-106436:-1:exon

VCA1004_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024382.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TatD family hydrolase
translation: MIDSHAHIYAKDFEHDLDDVIQRAQEVGISKILLPNIDLNSIEPMLATEARYPDICHSMMGLHPCYVNGNIEQDLATIKSWFAQHHFIAVGEIGIDLYWDKTFQAEQEFAFRTQLQWAKELNLPVVIHTRDSIEQTLSILSQEQDGRLKGVFHCFGGTVAEAKAINQLGFSLGIGGVSTFKNGGMDDVIPELDLNFVILETDCPYLAPTPHRGKRNEPSFMKLVAQKIADLKALPLSTISDITARNTQALFNLK
SIO_010081: VCA1004_RS00505
subclass of: SO_0000673
so part of: VCA1004_RS00505
location: complement(105672..106436)
location: region:105672-106436:-1
so has part: feature:105672-106436:-1:exon

WP_086981930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105672-106436:-1:exon

VCA1004_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: hemB
locus tag: VCA1004_RS00510
so part of: sequence
location: 106603..107646
location: region:106603-107646:1
so has part: feature:106603-107646:1:exon
subclass of: SO_0000010

position:106603:1
position: 106603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107646:1
position: 107646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106603-107646:1:exon

VCA1004_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: hemB
locus tag: VCA1004_RS00510
EC number: 4.2.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024383.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO process: GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porphobilinogen synthase
translation: MSVSIQGQFPGRRLRRIRKHDFSRRLVAENQVSVNDLIYPMFVLMGKNRREAVESMPGVERLSIDLLLEEADYLAKLGVPAIALFPVVNQDVKSLCATEAYNPEGLVQRAVRALKEHVPSIGVITDVALDPYTTHGQDGIIDKDGYVLNEETTEVLVKQALSHAAAGADVVAPSDMMDGRIGKIREALEKAGHIHTQIMAYSAKYASNYYGPFRDAVGSTANLKGADKKNYQMDPANSDEAIHEVAMDINEGADMVMVKPGMPYLDVVLRVKTELQVPTFAYQVSGEYAMHKAAILNGWLKEKETVMESLLCFKRAGADGILTYFAKDVAEWLAQDNISQDKTEKSS
SIO_010081: VCA1004_RS00510
subclass of: SO_0000673
so part of: VCA1004_RS00510
location: 106603..107646
location: region:106603-107646:1
so has part: feature:106603-107646:1:exon

WP_086981931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106603-107646:1:exon

VCA1004_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: gppA
locus tag: VCA1004_RS00515
so part of: sequence
location: complement(107790..109283)
location: region:107790-109283:-1
so has part: feature:107790-109283:-1:exon
subclass of: SO_0000010

position:107790:-1
position: 107790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109283:-1
position: 109283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107790-109283:-1:exon

VCA1004_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: gppA
locus tag: VCA1004_RS00515
EC number: 3.6.1.40
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020431195.1
GO function: GO:0008894 - guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity [Evidence IEA]
GO process: GO:0015974 - guanosine pentaphosphate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: guanosine-5'-triphosphate,3'-diphosphate diphosphatase
translation: MSDTVSSPLYAAIDLGSNSFHMLVVRHIEGSVQTMAKIKRKVRLANGLDQNNYLSQEAMQRGWDCLSLFAERLQDIPAGNIRIVGTAALRSATNVDVFVKKANQILGHPVDIISGEEEAATIYKGVAHTSGGLGHRLVVDIGGASTELIIGREFEAKALVSLSMGCVTWLDNYFHDRQLTHTNFENAILAAKATLSPILERYTELGWDVCVGASGTVQALQEIMLAQGMDEIITLAKLKRLQKQAMMASHLEELEIEGLTLERALVFPSGLSILIAIFESLHIDSMTLAGGALREGLVYEMIGEMRQSNIRQRTITSVQQRYQVDRQYGAQVAQVAKQLLEQCGHQDWIPEAQAEFLLQSAAELHEIGLSIDFKKGGQHGAYLLQNLDLPGFTLAQKHFLAELVRRYRDQLSSLPEQHALSGQSCKRLLRLLRLSVLLTHRRSAHLQPEFELQAEGDQLTLKMDAQWLQHNPLTQAELEIEANRQSDIGWPLTLSSL
SIO_010081: VCA1004_RS00515
subclass of: SO_0000673
so part of: VCA1004_RS00515
location: complement(107790..109283)
location: region:107790-109283:-1
so has part: feature:107790-109283:-1:exon

WP_086981932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107790-109283:-1:exon

VCA1004_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rhlB
locus tag: VCA1004_RS00520
so part of: sequence
location: complement(109300..110628)
location: region:109300-110628:-1
so has part: feature:109300-110628:-1:exon
subclass of: SO_0000010

position:109300:-1
position: 109300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110628:-1
position: 110628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109300-110628:-1:exon

VCA1004_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rhlB
locus tag: VCA1004_RS00520
EC number: 3.6.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017055268.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase RhlB
translation: MKKTHITEQKFADLDLLPQVIEGLEKKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNHLLKTAEPEGRAKTQPRAIIMAPTRELAIQIYHDAEGLIESTGLKAALAYGGESYDKQLNKLQDGVDILIGTCGRIIDFYKQKVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFRRMPQPSDRLNMLFSATLSYRVQELAFEHMHNPEHVVVEAAQKTGHRIEEELFYPSNEHKMALLQTLIEEEWPERAIIFANTKHKCEAVWGSLAADGHRVGLLTGDVAQKKRERILEEFTRGDVDFLVATDVAARGLHIPAVTHVFNFDLPDDCEDYVHRIGRTGRAGASGKSISFACEQYAINLPAIEEYIEHSIPMSEYDASALLTDLPPALRLQKRPQTNRRTNTGGNRGNNRNNGSRNNGPRTNNRRPRQPSNTK
SIO_010081: VCA1004_RS00520
subclass of: SO_0000673
so part of: VCA1004_RS00520
location: complement(109300..110628)
location: region:109300-110628:-1
so has part: feature:109300-110628:-1:exon

WP_086981933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109300-110628:-1:exon

VCA1004_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: trxA
locus tag: VCA1004_RS00525
so part of: sequence
location: 110742..111068
location: region:110742-111068:1
so has part: feature:110742-111068:1:exon
subclass of: SO_0000010

position:110742:1
position: 110742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111068:1
position: 111068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110742-111068:1:exon

VCA1004_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: trxA
locus tag: VCA1004_RS00525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008073352.1
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO process: GO:0006662 - glycerol ether metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin TrxA
translation: MSDKIMQLSDEGFENDVIKAAGPVLVDFWAEWCGPCKMIAPILDEIADEYEGKLTIGKLNIDQNSGTPPKFGIRGIPTLLLFKDGGVAATKVGALSKTQLKEFLDANL
SIO_010081: VCA1004_RS00525
subclass of: SO_0000673
so part of: VCA1004_RS00525
location: 110742..111068
location: region:110742-111068:1
so has part: feature:110742-111068:1:exon

WP_027695437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110742-111068:1:exon

VCA1004_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rho
locus tag: VCA1004_RS00530
so part of: sequence
location: 111273..112532
location: region:111273-112532:1
so has part: feature:111273-112532:1:exon
subclass of: SO_0000010

position:111273:1
position: 111273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112532:1
position: 112532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111273-112532:1:exon

VCA1004_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rho
locus tag: VCA1004_RS00530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017631298.1
GO function: GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MNLTELKNRPVSELVALGESLGLENLARLRKQDIIFSILKAHAKGGEDIFGDGVLEILQDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDSVAGKIRPPKDGERYFALLKVNTVNDDRPDNARNKILFENLTPIHPNDRIVMERGNGSTEDITARVLDLASPIGKGQRGLIVAPPKAGKTMLLQNIAQSITHNHPECEVMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKADELQKMWILRKIVHPMSETDAMEFLIDKLAMTKTNNEFFDAMRRQ
SIO_010081: VCA1004_RS00530
subclass of: SO_0000673
so part of: VCA1004_RS00530
location: 111273..112532
location: region:111273-112532:1
so has part: feature:111273-112532:1:exon

WP_086981934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111273-112532:1:exon

VCA1004_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00535
so part of: sequence
location: 112655..113668
location: region:112655-113668:1
so has part: feature:112655-113668:1:exon
subclass of: SO_0000010

position:112655:1
position: 112655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113668:1
position: 113668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112655-113668:1:exon

VCA1004_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHGWLMMSWWLLLGLFSHSSAATVMTQEEASSWMVNPQVQVSTEQLYQLALQDKIADLQTALQAIPLPKQEVTRYLLLKRIESDHLALSPSLLVFLQSQQQQQPVYQLIESYEDYSTSYPAFNTALVANRVLSAWQQEQHNIDLIMAVESGELQLKDWLQGDEFQRQQKEQLFLQEVDRFSEAALQQLVQQIDGSSVVQWLPSTAIVIKLAQRTQDEKLYDVLWKMKANDSSVEEVQRLGQVADSFSLQQVMNATKNPVLKPLAIQQLVKVQPMTPSIQAFLIEKLNQNSDGLMVARALSESEHHDWLVSLVQEGQVSHGQNLLQSMQAYLSISAQ
SIO_010081: VCA1004_RS00535
subclass of: SO_0000673
so part of: VCA1004_RS00535
location: 112655..113668
location: region:112655-113668:1
so has part: feature:112655-113668:1:exon

WP_086981935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112655-113668:1:exon

VCA1004_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ubiD
locus tag: VCA1004_RS00540
so part of: sequence
location: 113783..115648
location: region:113783-115648:1
so has part: feature:113783-115648:1:exon
subclass of: SO_0000010

position:113783:1
position: 113783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115648:1
position: 115648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113783-115648:1:exon

VCA1004_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ubiD
locus tag: VCA1004_RS00540
EC number: 4.1.1.98
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010643201.1
GO function: GO:0016831 - carboxy-lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-3-polyprenylbenzoate decarboxylase
translation: MSFRDLRDFIERLERNGLLKRISHPVDPHYEMTEISDRTLRAGGPALLFEHPIGYDMPVLTNLFGTPERVALGMGRERVEELREVGKLLAFLKEPEPPKGFKDALGKLPLFKQVLNMPVKRLRSAACQKIVWQGDEVDLDRIPVMSCWPGDVAPLLTWGLTITKGPNKKRQNLGIYRQQKIAKNKVIMRWLAHRGGALDLRDWMETHPGEPFPVSVAFGADPATILGAVTPIPDTLSEYAFAGLLRGSKTEVVKSISNDLDIPASAELVLEGYIDPQEFADEGPYGDHTGYYNEPEQHHVFTITHITMREQAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEITDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVLVCDEDVDARDWSSVSKAMVQHMEPERDTLFIDHTPIDSLDFASPVAGLGSKMGLDITKKWPEEIALSQPQLQSEANKAPLLALDRDELTSEFPEILDVNFPIAAESQQIVFVKITKQQPKQGLDLIARLRAHFIDRVNVKYIVVCDGDVDIKDWNDVIWAITTRIDPSRDSLLLSDEQGSTLGLDATNKLPQEITREWGTPIIKDPQLVAKIDHIWDSLNILPSK
SIO_010081: VCA1004_RS00540
subclass of: SO_0000673
so part of: VCA1004_RS00540
location: 113783..115648
location: region:113783-115648:1
so has part: feature:113783-115648:1:exon

WP_086981936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113783-115648:1:exon

VCA1004_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00545
so part of: sequence
location: 115645..115914
location: region:115645-115914:1
so has part: feature:115645-115914:1:exon
subclass of: SO_0000010

position:115645:1
position: 115645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115914:1
position: 115914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115645-115914:1:exon

VCA1004_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020333379.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2Fe-2S iron-sulfur cluster-binding protein
translation: MKHKVWIKPDDIVFEVDSLQTLLSAAQEQGVSLPYRCKLGACMTCLCKKIEGEVEYRLEPMLTQQEQQQGWILPCQAYAKSHLVLMLEE
SIO_010081: VCA1004_RS00545
subclass of: SO_0000673
so part of: VCA1004_RS00545
location: 115645..115914
location: region:115645-115914:1
so has part: feature:115645-115914:1:exon

WP_086981937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115645-115914:1:exon

VCA1004_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fre
locus tag: VCA1004_RS00550
so part of: sequence
location: 115927..116640
location: region:115927-116640:1
so has part: feature:115927-116640:1:exon
subclass of: SO_0000010

position:115927:1
position: 115927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116640:1
position: 116640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115927-116640:1:exon

VCA1004_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fre
locus tag: VCA1004_RS00550
EC number: 1.5.1.41
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010444558.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-flavin reductase
translation: MTIECKVKSIEPLASNTFRILLHPQSPVSFKAGQYLMVVMGEKDKRPFSIASSPCRHLGELELHIGAAEHNAYAIEVVEAMNQAFADGSSIQIDAPHGEAWLQEDNQQPLLLIAGGTGFSYVRSILDHCISQKNTQPIYLYWGAKDSSQLYAMEELHAIAKQHNHVHFVPVIESEENNWAGKIGNVLEAIEQDFESLAEFDIYIAGRFEMAGAARERFTQYKQANRQRMYADAYAFL
SIO_010081: VCA1004_RS00550
subclass of: SO_0000673
so part of: VCA1004_RS00550
location: 115927..116640
location: region:115927-116640:1
so has part: feature:115927-116640:1:exon

WP_086981938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115927-116640:1:exon

VCA1004_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00560
so part of: sequence
location: 117237..118779
location: region:117237-118779:1
so has part: feature:117237-118779:1:exon
subclass of: SO_0000573

position:117237:1
position: 117237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118779:1
position: 118779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117237-118779:1:exon

VCA1004_RS00560
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
locus tag: VCA1004_RS00560
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00560
subclass of: SO_0000673
so part of: VCA1004_RS00560
location: 117237..118779
location: region:117237-118779:1
so has part: feature:117237-118779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117237-118779:1:exon

VCA1004_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00565
so part of: sequence
location: 118872..118947
location: region:118872-118947:1
so has part: feature:118872-118947:1:exon
subclass of: SO_0000663

position:118872:1
position: 118872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118947:1
position: 118947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118872-118947:1:exon

VCA1004_RS00565
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00565
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:118906..118908,aa:Glu,seq:ttc)
SIO_010081: VCA1004_RS00565
subclass of: SO_0000673
so part of: VCA1004_RS00565
location: 118872..118947
location: region:118872-118947:1
so has part: feature:118872-118947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118872-118947:1:exon

VCA1004_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00570
so part of: sequence
location: 118976..119051
location: region:118976-119051:1
so has part: feature:118976-119051:1:exon
subclass of: SO_0000663

position:118976:1
position: 118976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119051:1
position: 119051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118976-119051:1:exon

VCA1004_RS00570
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00570
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:119009..119011,aa:Lys,seq:ttt)
SIO_010081: VCA1004_RS00570
subclass of: SO_0000673
so part of: VCA1004_RS00570
location: 118976..119051
location: region:118976-119051:1
so has part: feature:118976-119051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118976-119051:1:exon

VCA1004_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00575
so part of: sequence
location: 119092..119167
location: region:119092-119167:1
so has part: feature:119092-119167:1:exon
subclass of: SO_0000663

position:119092:1
position: 119092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119167:1
position: 119167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119092-119167:1:exon

VCA1004_RS00575
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00575
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:119125..119127,aa:Val,seq:tac)
SIO_010081: VCA1004_RS00575
subclass of: SO_0000673
so part of: VCA1004_RS00575
location: 119092..119167
location: region:119092-119167:1
so has part: feature:119092-119167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119092-119167:1:exon

VCA1004_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00580
so part of: sequence
location: 119508..122395
location: region:119508-122395:1
so has part: feature:119508-122395:1:exon
subclass of: SO_0000573

position:119508:1
position: 119508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122395:1
position: 122395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119508-122395:1:exon

VCA1004_RS00580
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
locus tag: VCA1004_RS00580
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00580
subclass of: SO_0000673
so part of: VCA1004_RS00580
location: 119508..122395
location: region:119508-122395:1
so has part: feature:119508-122395:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119508-122395:1:exon

VCA1004_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS00585
so part of: sequence
location: 122527..122642
location: region:122527-122642:1
so has part: feature:122527-122642:1:exon
subclass of: SO_0000573

position:122527:1
position: 122527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122642:1
position: 122642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122527-122642:1:exon

VCA1004_RS00585
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS00585
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00585
subclass of: SO_0000673
so part of: VCA1004_RS00585
location: 122527..122642
location: region:122527-122642:1
so has part: feature:122527-122642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122527-122642:1:exon

VCA1004_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00590
so part of: sequence
location: 123100..124642
location: region:123100-124642:1
so has part: feature:123100-124642:1:exon
subclass of: SO_0000573

position:123100:1
position: 123100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124642:1
position: 124642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123100-124642:1:exon

VCA1004_RS00590
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
locus tag: VCA1004_RS00590
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00590
subclass of: SO_0000673
so part of: VCA1004_RS00590
location: 123100..124642
location: region:123100-124642:1
so has part: feature:123100-124642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123100-124642:1:exon

VCA1004_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00595
so part of: sequence
location: 124735..124810
location: region:124735-124810:1
so has part: feature:124735-124810:1:exon
subclass of: SO_0000663

position:124735:1
position: 124735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124810:1
position: 124810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124735-124810:1:exon

VCA1004_RS00595
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00595
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:124769..124771,aa:Glu,seq:ttc)
SIO_010081: VCA1004_RS00595
subclass of: SO_0000673
so part of: VCA1004_RS00595
location: 124735..124810
location: region:124735-124810:1
so has part: feature:124735-124810:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124735-124810:1:exon

VCA1004_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00600
so part of: sequence
location: 124839..124914
location: region:124839-124914:1
so has part: feature:124839-124914:1:exon
subclass of: SO_0000663

position:124839:1
position: 124839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124914:1
position: 124914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124839-124914:1:exon

VCA1004_RS00600
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00600
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:124872..124874,aa:Lys,seq:ttt)
SIO_010081: VCA1004_RS00600
subclass of: SO_0000673
so part of: VCA1004_RS00600
location: 124839..124914
location: region:124839-124914:1
so has part: feature:124839-124914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124839-124914:1:exon

VCA1004_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00605
so part of: sequence
location: 124955..125030
location: region:124955-125030:1
so has part: feature:124955-125030:1:exon
subclass of: SO_0000663

position:124955:1
position: 124955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125030:1
position: 125030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124955-125030:1:exon

VCA1004_RS00605
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00605
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:124988..124990,aa:Val,seq:tac)
SIO_010081: VCA1004_RS00605
subclass of: SO_0000673
so part of: VCA1004_RS00605
location: 124955..125030
location: region:124955-125030:1
so has part: feature:124955-125030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124955-125030:1:exon

VCA1004_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00610
so part of: sequence
location: 125371..128258
location: region:125371-128258:1
so has part: feature:125371-128258:1:exon
subclass of: SO_0000573

position:125371:1
position: 125371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128258:1
position: 128258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125371-128258:1:exon

VCA1004_RS00610
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
locus tag: VCA1004_RS00610
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00610
subclass of: SO_0000673
so part of: VCA1004_RS00610
location: 125371..128258
location: region:125371-128258:1
so has part: feature:125371-128258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125371-128258:1:exon

VCA1004_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS00615
so part of: sequence
location: 128390..128505
location: region:128390-128505:1
so has part: feature:128390-128505:1:exon
subclass of: SO_0000573

position:128390:1
position: 128390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128505:1
position: 128505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128390-128505:1:exon

VCA1004_RS00615
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS00615
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00615
subclass of: SO_0000673
so part of: VCA1004_RS00615
location: 128390..128505
location: region:128390-128505:1
so has part: feature:128390-128505:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128390-128505:1:exon

VCA1004_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00620
so part of: sequence
location: 128576..128652
location: region:128576-128652:1
so has part: feature:128576-128652:1:exon
subclass of: SO_0000663

position:128576:1
position: 128576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128652:1
position: 128652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128576-128652:1:exon

VCA1004_RS00620
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00620
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:128610..128612,aa:Thr,seq:ggt)
SIO_010081: VCA1004_RS00620
subclass of: SO_0000673
so part of: VCA1004_RS00620
location: 128576..128652
location: region:128576-128652:1
so has part: feature:128576-128652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128576-128652:1:exon

VCA1004_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS00625
so part of: sequence
location: 128689..128804
location: region:128689-128804:1
so has part: feature:128689-128804:1:exon
subclass of: SO_0000573

position:128689:1
position: 128689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128804:1
position: 128804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128689-128804:1:exon

VCA1004_RS00625
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS00625
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS00625
subclass of: SO_0000673
so part of: VCA1004_RS00625
location: 128689..128804
location: region:128689-128804:1
so has part: feature:128689-128804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128689-128804:1:exon

VCA1004_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ilvY
locus tag: VCA1004_RS00630
so part of: sequence
location: complement(128860..129750)
location: region:128860-129750:-1
so has part: feature:128860-129750:-1:exon
subclass of: SO_0000010

position:128860:-1
position: 128860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129750:-1
position: 129750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128860-129750:-1:exon

VCA1004_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ilvY
locus tag: VCA1004_RS00630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025067.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional activator IlvY
translation: MNIKTLQLFLHLCSSQSFAQSATAMHISPSALSRQIQKLEQQIGKPLFVRDNRRVELTEAGKKLLDVASQISNQWQQFCIDIQDDNQELSGEIRLFCSVTASFSHLPQLLRDFRLSYPKVELKLSTGDPALAIERLLVDEADIVVCAMPSHLPARLCFQPIGDIPLSVIAPTGPSSFSTELQKEQPQWEHIPFIIPITGTARERSNAWFKKMKFKPTIYSQTSGGHEAIVSMVALGLGVGIAPDVVINNSPVKDKVQRLNVEPISPFQLGVCCHESQLNNPLIKALWQIAQTKFIK
SIO_010081: VCA1004_RS00630
subclass of: SO_0000673
so part of: VCA1004_RS00630
location: complement(128860..129750)
location: region:128860-129750:-1
so has part: feature:128860-129750:-1:exon

WP_086981941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128860-129750:-1:exon

VCA1004_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ilvC
locus tag: VCA1004_RS00635
so part of: sequence
location: 129902..131389
location: region:129902-131389:1
so has part: feature:129902-131389:1:exon
subclass of: SO_0000010

position:129902:1
position: 129902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131389:1
position: 131389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129902-131389:1:exon

VCA1004_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ilvC
locus tag: VCA1004_RS00635
EC number: 1.1.1.86
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011079096.1
GO function: GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ketol-acid reductoisomerase
translation: MANNYFNTLNLREQLDQLGRCRFMDREEFAQEADYLKGKKIVIVGCGAQGLNQGLNMRDSGLNVAYALRQAAIDEQRQSFKNAKDNGFEVASYEELIPQADLVVNLTPDKQHTNVVETVMPLMKQGAALGYSHGFNIVEEGMQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPQGEGLEIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSIVCYEKMVTEGIDPGYAGKLLQYGWETITEALKFGGVTHMMDRLSNPAKVKAFELSEELKELMRPLYNKHMDDIICGEFSRTMMADWANDDKNLLGWREETGQTAFENYPETDVEISEQEYFDNGILMIAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANTVARKRLYEMNVVISDTAEYGNYLFANVATPLLREKFMPKVGTDVIGKGLGETSNQVDNAQLIEINDALRNHPVEWIGQELRGYMKDMKRIAVGG
SIO_010081: VCA1004_RS00635
subclass of: SO_0000673
so part of: VCA1004_RS00635
location: 129902..131389
location: region:129902-131389:1
so has part: feature:129902-131389:1:exon

WP_086981942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129902-131389:1:exon

VCA1004_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00640
so part of: sequence
location: complement(131488..132333)
location: region:131488-132333:-1
so has part: feature:131488-132333:-1:exon
subclass of: SO_0000010

position:131488:-1
position: 131488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132333:-1
position: 132333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131488-132333:-1:exon

VCA1004_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00640
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MTVQALKHQHKIQHLLQSIGLPKSVYYYQCQVLSTPEPYANEIASIERIFHKHKGRYGYRRIHYALRREGIYLNHKTVQRLMAKLGLKSTVRPKKYRSYKGAIGRIAPNILKRDFKSTKPNEKWVTDVTEFKVAGEKVYLSPIIDLFNQEVVSHTVASSPKLHLVTEMLEKATSKLSQASSLTLHSDQGWQYQHRDYRNKLKEKRINQSMSRKGNCLDNAVAENFFALLKTEMYHGYHFDSAEQLMACIDEYIDYYNNDRIKVKLKGLTPVEYRNQALEAA
SIO_010081: VCA1004_RS00640
subclass of: SO_0000673
so part of: VCA1004_RS00640
location: complement(131488..132333)
location: region:131488-132333:-1
so has part: feature:131488-132333:-1:exon

WP_086981067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131488-132333:-1:exon

VCA1004_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00645
so part of: sequence
location: complement(132330..132839)
location: region:132330-132839:-1
so has part: feature:132330-132839:-1:exon
subclass of: SO_0000010

position:132330:-1
position: 132330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132839:-1
position: 132839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132330-132839:-1:exon

VCA1004_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017081915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSKYIRELKLCIAQRCLDGESSTSLAKELSIPANQIRYWTSVYRIHGSSSFLPLDYENSADFKFSVLKSMWENNWSISQASAEFNFSSNGTISVWLKLYNQSGFQGLHSRPKGRPSMKTQSNKRPTKPDEDMSLDELREELAYLRAENAVLKKLEELDKLKRQAAKKKR
SIO_010081: VCA1004_RS00645
subclass of: SO_0000673
so part of: VCA1004_RS00645
location: complement(132330..132839)
location: region:132330-132839:-1
so has part: feature:132330-132839:-1:exon

WP_086981789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132330-132839:-1:exon

VCA1004_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00650
so part of: sequence
location: complement(132946..133200)
location: region:132946-133200:-1
so has part: feature:132946-133200:-1:exon
subclass of: SO_0000010

position:132946:-1
position: 132946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133200:-1
position: 133200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132946-133200:-1:exon

VCA1004_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: accessory factor UbiK family protein
translation: MFDAKKIEQIAKQIHDSMPQPVKDLGADVDQKVRQVLQGQLSKLDVVSREEFDVQTQVLLRTRQKLNELETKLADIEAKLNEKE
SIO_010081: VCA1004_RS00650
subclass of: SO_0000673
so part of: VCA1004_RS00650
location: complement(132946..133200)
location: region:132946-133200:-1
so has part: feature:132946-133200:-1:exon

WP_086981944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132946-133200:-1:exon

VCA1004_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00655
so part of: sequence
location: complement(133332..136418)
location: region:133332-136418:-1
so has part: feature:133332-136418:-1:exon
subclass of: SO_0000010

position:133332:-1
position: 133332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136418:-1
position: 136418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133332-136418:-1:exon

VCA1004_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025064.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multidrug efflux RND transporter permease subunit
translation: MRFTDVFIKRPVLAVSISLLIALLGFQAIFKMSVREYPEMTNTVVTVTTSYYGADANLIQGFITQPLEQAIAQADNIDYMTSSSVLGSSTITVTMKLNTDPNGALADILAQTNSVRSQLPKEAEDPTVTMSTGSTTSVLYIGFTSSELVSSQITDYLQRVINPQLFTVNGVSKVNLYGGQQYALRIWLDPAKMAAFDLTATEVMGILDANNYQSATGQSTGEFVIYNGSANTQVESTDELERLVVKSDKGQVVRLSDIAKVTLAKSHDSYRATSNGSEAVVAAIDAAPTANPINIAHDILAMLPELQKNLPSNIEMRVLYDSTVAINESINEVIHTILEAALIVLVVITLFLGSFRAVLIPIITIPLSLIGVAVAMQAMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKLGEPPFRAAIIGTREIATPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGAVFVSGIIALTLSPVMCSKMLKAHTKPSRFELTVHGLLDRMTNRYERALHAVMQHRPVFIAFAVIVMASLPLLFKFIPSELAPSEDKGVVVLMGTGASNSNLDYLQNTMDEVNNILVDQPEIQYAQAFSGVPASNQAFGIASMKPWSQREASQSEVTDRVGKLMKDIPGMNVSAFQMPELPGAGSGLPMQFVITTPSSFESLFQIASDILSEVGKSPLFVYSTLDLNFDSATMKINIDKDKAGAYGVTMQDIAATIGTMMSDGYVNRINLDGRSYEVIPQVERKDRLNPESMNGYYVRASNGDAIPLSGLVKIDVIAQPLSLPHLNQLNSATIGAVPAPTASMGQAVDWFENMAAEKLPLGYSHEYLGEARQYVTEGNALYATFGLALAVIFLVLAIQFESVRDPLVIMVSVPLAICGALIALAWGAATMNIYSQVGLITLVGLITKHGILICEVAKEEQLLHGKSKMDAVMESAKVRLRPILMTTAAMIAGLIPLLYATGAGAAQRFSIGIVIVAGLAIGTVFTLFVLPVIYSYLASEHKPLPEFDETIPPLEDPTQHS
SIO_010081: VCA1004_RS00655
subclass of: SO_0000673
so part of: VCA1004_RS00655
location: complement(133332..136418)
location: region:133332-136418:-1
so has part: feature:133332-136418:-1:exon

WP_086981945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133332-136418:-1:exon

VCA1004_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00660
so part of: sequence
location: complement(136434..137540)
location: region:136434-137540:-1
so has part: feature:136434-137540:-1:exon
subclass of: SO_0000010

position:136434:-1
position: 136434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137540:-1
position: 137540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136434-137540:-1:exon

VCA1004_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000759350.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MKKWTFIMLVVAILLFGSVIGFNMFKQTKIAEYMANMPEPEFPVTVTTLSPETWTPTINAIGFIEPIQGVTLTAQASGQIDRINFDSGIQVKEGDVLVEVDSKVEKAQLQSSQAKLPAAKAKYIRYKDLYAKGSISKEAYDEAQANYLSLSADIASLKASIERRTVTAPFAGTVGLRNVFLGQFLETGHDVVRLEDMSVMRLRFTVPQTDISKIYVDQQVNIVVDSYPDKTFEGSITAIAPAVNAQSGLIQVQAQIPNSEGKLRSGMFARASIILPSLKEQIIVPQTAITYTLYGDSVYVLEEQEGVQRAIQTIVKVGERKGSIAHIIEGLKPNQTIVTSGQVRLSNGSKVKIVESDATTPPAQTPML
SIO_010081: VCA1004_RS00660
subclass of: SO_0000673
so part of: VCA1004_RS00660
location: complement(136434..137540)
location: region:136434-137540:-1
so has part: feature:136434-137540:-1:exon

WP_086981946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136434-137540:-1:exon

VCA1004_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00665
so part of: sequence
location: complement(137559..138152)
location: region:137559-138152:-1
so has part: feature:137559-138152:-1:exon
subclass of: SO_0000010

position:137559:-1
position: 137559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138152:-1
position: 138152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137559-138152:-1:exon

VCA1004_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017076482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MTNPTDNSIVDKRQLILNTAEQMLARTGFQGMSMHKLAQEAGIAAGTIYRYFQDKDDLVEAIRLHVLQQVADIVQQGVEDHMPLKERFILIWRNVSNMATTKNEVDIILNRLQYESLPVKPTCGNDIERQLFYKIDAMFNEGKAQGIFKPLDNYILASLSLDVSLSIAKKHVVGSYTITQATLDAAIEASWDAVIQH
SIO_010081: VCA1004_RS00665
subclass of: SO_0000673
so part of: VCA1004_RS00665
location: complement(137559..138152)
location: region:137559-138152:-1
so has part: feature:137559-138152:-1:exon

WP_086981947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137559-138152:-1:exon

VCA1004_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rep
locus tag: VCA1004_RS00670
so part of: sequence
location: 138284..140299
location: region:138284-140299:1
so has part: feature:138284-140299:1:exon
subclass of: SO_0000010

position:138284:1
position: 138284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140299:1
position: 140299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138284-140299:1:exon

VCA1004_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rep
locus tag: VCA1004_RS00670
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005524938.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA helicase Rep
translation: MRLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYQARHIAAVTFTNKAAREMKERVGQTLGKAESRGLMVSTFHTLGLNIIRREYKTLGLKSGFSLFDDQDQLALLKELTETQLDGDKDLLRQLMSSISNWKNDMLTPDQVKAQARSEQEQLFAFCFEMYLKQMKAYNALDFDDLIAMPVLLLKTHQEVRERWQAKIRYLLVDEYQDTNTSQYELVRLLVGERARLTVVGDDDQSIYSWRGARPQNLVLLNQDFPQLKIIKLEQNYRSTSRILRCANILIANNPHVFEKTLFSEIPDGEKLKLLTAKNEEHEAERVTGEIIAHKFLNRTQYKDYAILYRGNHQSRLIEKSLMQNRVPYKISGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPVTLEKLGSYANMRGKSLFAASFELGLEHHLSGRGLEALRRFTSWIVEIADNAERGNTVEAVRSLVRDINYEDWLYETSSSPKAAEMRMKNVSDLYTWITSDLEGDNYDQEVKTLKEVVQRLTLRDMMERGEGEDDADQVQLMTLHASKGLEFPYVYLMGAEEGILPHQTSIDEDNVDEERRLMYVGITRAQRELTFTMCRERRQYGEILKPTQSRFLDELPFDDVEWELHKKPQTAEERMEKGQAHIANLRAMFKK
SIO_010081: VCA1004_RS00670
subclass of: SO_0000673
so part of: VCA1004_RS00670
location: 138284..140299
location: region:138284-140299:1
so has part: feature:138284-140299:1:exon

WP_086981948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138284-140299:1:exon

VCA1004_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00675
so part of: sequence
location: complement(140433..140846)
location: region:140433-140846:-1
so has part: feature:140433-140846:-1:exon
subclass of: SO_0000010

position:140433:-1
position: 140433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140846:-1
position: 140846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140433-140846:-1:exon

VCA1004_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017069626.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c5 family protein
translation: MDMNRQTLIILTATLTFSSFTFASGISDSERAAIADRIKPVGDVYLAGNEPVVETPSGPRDGAAVYSTFCIACHGTGVSGAPKKDDAGDWAPRIAQGEATLIKHAIEGFNAMPAKGTCMDCSDDEIKAAIEYMAAGL
SIO_010081: VCA1004_RS00675
subclass of: SO_0000673
so part of: VCA1004_RS00675
location: complement(140433..140846)
location: region:140433-140846:-1
so has part: feature:140433-140846:-1:exon

WP_086981949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140433-140846:-1:exon

VCA1004_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00680
so part of: sequence
location: 141116..141192
location: region:141116-141192:1
so has part: feature:141116-141192:1:exon
subclass of: SO_0000663

position:141116:1
position: 141116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141192:1
position: 141192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141116-141192:1:exon

VCA1004_RS00680
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00680
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:141150..141152,aa:Arg,seq:ccg)
SIO_010081: VCA1004_RS00680
subclass of: SO_0000673
so part of: VCA1004_RS00680
location: 141116..141192
location: region:141116-141192:1
so has part: feature:141116-141192:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141116-141192:1:exon

VCA1004_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00685
so part of: sequence
location: 141229..141304
location: region:141229-141304:1
so has part: feature:141229-141304:1:exon
subclass of: SO_0000663

position:141229:1
position: 141229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141304:1
position: 141304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141229-141304:1:exon

VCA1004_RS00685
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00685
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:141262..141264,aa:His,seq:gtg)
SIO_010081: VCA1004_RS00685
subclass of: SO_0000673
so part of: VCA1004_RS00685
location: 141229..141304
location: region:141229-141304:1
so has part: feature:141229-141304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141229-141304:1:exon

VCA1004_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00690
so part of: sequence
location: 141594..141670
location: region:141594-141670:1
so has part: feature:141594-141670:1:exon
subclass of: SO_0000663

position:141594:1
position: 141594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141670:1
position: 141670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141594-141670:1:exon

VCA1004_RS00690
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00690
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:141628..141630,aa:Pro,seq:tgg)
SIO_010081: VCA1004_RS00690
subclass of: SO_0000673
so part of: VCA1004_RS00690
location: 141594..141670
location: region:141594-141670:1
so has part: feature:141594-141670:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141594-141670:1:exon

VCA1004_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00695
so part of: sequence
location: 141713..141788
location: region:141713-141788:1
so has part: feature:141713-141788:1:exon
subclass of: SO_0000663

position:141713:1
position: 141713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141788:1
position: 141788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141713-141788:1:exon

VCA1004_RS00695
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00695
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:141746..141748,aa:His,seq:gtg)
SIO_010081: VCA1004_RS00695
subclass of: SO_0000673
so part of: VCA1004_RS00695
location: 141713..141788
location: region:141713-141788:1
so has part: feature:141713-141788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141713-141788:1:exon

VCA1004_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00700
so part of: sequence
location: 141979..142055
location: region:141979-142055:1
so has part: feature:141979-142055:1:exon
subclass of: SO_0000663

position:141979:1
position: 141979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142055:1
position: 142055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141979-142055:1:exon

VCA1004_RS00700
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS00700
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:142013..142015,aa:Pro,seq:tgg)
SIO_010081: VCA1004_RS00700
subclass of: SO_0000673
so part of: VCA1004_RS00700
location: 141979..142055
location: region:141979-142055:1
so has part: feature:141979-142055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141979-142055:1:exon

VCA1004_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00705
so part of: sequence
location: 142957..144672
location: region:142957-144672:1
so has part: feature:142957-144672:1:exon
subclass of: SO_0000010

position:142957:1
position: 142957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144672:1
position: 144672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142957-144672:1:exon

VCA1004_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019281822.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MPLLEVKDLRIEYPSRHGVHTAVKSLSFCIERGEIVGVVGESGAGKSTVGNAVIDLLSPPGRIAGGDVYLDGDRISGLNSEQMRSVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMKVSEQEAYTRALNLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTTALDVSIQDQILNLIRDLCIKNNVGCMLVTHDMGVVSNVTDKVAVMYRGDLVEFGPTAKVLGTPEHPYTHSLISAVPRSDKKFDRFPLVSYIEEAHEMEPLDIKNHWLGQSQDQRDYTGPLLNVENVSLRFTTKDSFFESRREYVQASNNVSFEVHEGETFGLVGESGSGKSTIARVIAGLYAPNEGKVTFEGIDLTAIKSERERRPFRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRDENETRKIVHDLLDHVGLGRMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRIGVMKMGQLLEVSPTEQLFTAPQHEYSQQLISLMPEFTGLREEIKTA
SIO_010081: VCA1004_RS00705
subclass of: SO_0000673
so part of: VCA1004_RS00705
location: 142957..144672
location: region:142957-144672:1
so has part: feature:142957-144672:1:exon

WP_086981950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142957-144672:1:exon

VCA1004_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00710
so part of: sequence
location: 144795..146342
location: region:144795-146342:1
so has part: feature:144795-146342:1:exon
subclass of: SO_0000010

position:144795:1
position: 144795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146342:1
position: 146342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144795-146342:1:exon

VCA1004_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025318.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKMMKTKLALALAATGLSFNALAADITVAYDADPVSLDPQEQLSGGTLQLSHMVFDPLVRYTQSLEFEPRLATKWERIDGHTMRFHLRQGVKFHSGNTMTADDVIWTFQRLQKSPDFKGIFTPFTDMVKVDDYTIDIKTEEGFPLVLQTATYIFPMDSKFYSESPDKGEIVKHGNSFASTHESGTGPFIVSDREQGVKVDFTRFKDYWDKDSKGNVDNLTLKPIKENATRVAALLSGGVDMIAPVAPNDQQRVKDAKGFELVTLPGTRIITFQLNQDSNPALKDARVRQAIVYAINNEGIAKRIMKGFATAAGQQSPEGYAGYNPELKPRYDLKKAQELMKEAGYEKGLSLTMIAPNNRYVNDAQIAQATAAMLSKIGIKVDLKTMPKAQYWPEFDKCSADILMVGWHSDTEDSANLTEFLTMTRNEQTGKGQYNCGHYSNPEVDKLITEANVNTDPASRAQQLQKVEAILYQDAAFVPLHWENLAWAAKSNVHIAPIVNGMNFPYFGDLVVDEK
SIO_010081: VCA1004_RS00710
subclass of: SO_0000673
so part of: VCA1004_RS00710
location: 144795..146342
location: region:144795-146342:1
so has part: feature:144795-146342:1:exon

WP_086981951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144795-146342:1:exon

VCA1004_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00715
so part of: sequence
location: 146492..147469
location: region:146492-147469:1
so has part: feature:146492-147469:1:exon
subclass of: SO_0000010

position:146492:1
position: 146492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147469:1
position: 147469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146492-147469:1:exon

VCA1004_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196664.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MFTFLVKRLFQALIVMFVISLVAFSIQDNLGDPLRELVGQSVSQAERDALRDEMGLNDPFVVKYHRFVVNALHGDLGTSYFFKKPAADVILDKLPATLELVFGASVIIIFLSIPLGVYSAINPKSLLTKAIMAMSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGDTSDILGWDSGLFTLDGLAHLVLPCISLASIMLPLFVRLVRSEMLEVLSSEYIKFCKAKGLAMNKIYYQHALKNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIFVVTNTIVDLLYGLVNPTVNITGKGA
SIO_010081: VCA1004_RS00715
subclass of: SO_0000673
so part of: VCA1004_RS00715
location: 146492..147469
location: region:146492-147469:1
so has part: feature:146492-147469:1:exon

WP_086984591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146492-147469:1:exon

VCA1004_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00720
so part of: sequence
location: 147472..148416
location: region:147472-148416:1
so has part: feature:147472-148416:1:exon
subclass of: SO_0000010

position:147472:1
position: 147472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148416:1
position: 148416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147472-148416:1:exon

VCA1004_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005421492.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MNQQTSSIVPTRWERFKQSDILYYFLRDKVAMVSFAVFMVFFVAAVLSPWIAPTNPYDLTSIDIMNSELPPSWMAGGESAFWLGTDDQGRDIFSTILYGSRLSLMIGFCAVAVQLFLGIIIGLSAGYFGGRIDSFLMRFADVQLSFSTMMVAIIVSAIFKASFGGEFYSEYAVLMLIVIIGVAEWPQYARTIRASVLAEKEKEYVEAARVMGFRSPRIMFRHILPNCLSPILVISTVQIANAIMSEAALSFLGLGLPVDQPSLGSLISIGFNYIFSGSWWITAFPGIVLVTIVLVINLLGDWLRDVFNPKLYKG
SIO_010081: VCA1004_RS00720
subclass of: SO_0000673
so part of: VCA1004_RS00720
location: 147472..148416
location: region:147472-148416:1
so has part: feature:147472-148416:1:exon

WP_086981952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147472-148416:1:exon

VCA1004_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00725
so part of: sequence
location: 148531..149511
location: region:148531-149511:1
so has part: feature:148531-149511:1:exon
subclass of: SO_0000010

position:148531:1
position: 148531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149511:1
position: 149511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148531-149511:1:exon

VCA1004_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004733066.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
translation: MLRLAIIGTNWITERFVQAAIEVNEFELTGVYSRTEARASEFATLFNAPAQCFTDLETMAQSDAFDAVYIASPNSLHYAQSVLMLEHGKHVICEKPVASNITQAEHMYQVAEAHDVVLFEAFKTEYLPNFQLINQNLGKLGKLHKVFINYCQYSSRYQRYLDGENPNTFNPVFSNGSIMDIGFYCVSSAVALFGEPITVKASAHLLDSGVDAHGTVILTYEDHEVVLSHSKVSDSNIPSEIQGEAGSLIIEHISECDHVVLKLRGEAPLRLQVPQVDNSMTYEAKEFAEQIKQGKLCEKAKARALGVSRITTEVRQQTGVVFPADG
SIO_010081: VCA1004_RS00725
subclass of: SO_0000673
so part of: VCA1004_RS00725
location: 148531..149511
location: region:148531-149511:1
so has part: feature:148531-149511:1:exon

WP_086981953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148531-149511:1:exon

VCA1004_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00730
so part of: sequence
location: complement(149620..150741)
location: region:149620-150741:-1
so has part: feature:149620-150741:-1:exon
subclass of: SO_0000010

position:149620:-1
position: 149620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150741:-1
position: 150741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149620-150741:-1:exon

VCA1004_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLSPFRFNNIHFTLIAAWLSFIPSEFAHAARAIGEVHTVPQVTNQSPPATSHHPSTSSPQPTSPASTDKVWDRVLPLGGQVAIYNGYDLPLPFGVSFLFSHVAQDQLISDMKLGYSGEPNIDIDFLSFDKFRSKTNTPQLKLDAWVLPFLNVFATVGRINGTIDINMSMPKGSVVTSGPVTEALNNGIQAYCAKNPLKCKAGSQLLPDEMPDIFSGEPWRLSAEAEVEGYNYSFGAMLAGASGDWFYTMPIVYTQTDMKKTNVSGGALNIQPRVGYTFDLPHGLDVNLYTGASYMDIQQTLKGGFNLETMESSQDFDAPHTIAFEVHQENKEKWAGILGFNLNVNQHLSAAMEYTGIVGDRRQLILMLNGRF
SIO_010081: VCA1004_RS00730
subclass of: SO_0000673
so part of: VCA1004_RS00730
location: complement(149620..150741)
location: region:149620-150741:-1
so has part: feature:149620-150741:-1:exon

WP_086981954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149620-150741:-1:exon

VCA1004_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00735
so part of: sequence
location: complement(150882..151523)
location: region:150882-151523:-1
so has part: feature:150882-151523:-1:exon
subclass of: SO_0000010

position:150882:-1
position: 150882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151523:-1
position: 151523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150882-151523:-1:exon

VCA1004_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFILLFSLLSYWTGTPITSLTNPDYRAYASPYNYNHLQLGAGWQTDGLDIKLAGSYMLNEHWILTSHYQNYFLNDEDYPTGDEAYGSHFNQSDFAIGGLYRWPINASLDAVFGGELSYDWYKNRQSSSTAEQIVGINYDDYSLGVRGLAGLRYSVTDNIDVGTDIGAKYAYGRTYLQTSAEMNYYFTQNIALGGRASYDDHDGQIGFYIRITN
SIO_010081: VCA1004_RS00735
subclass of: SO_0000673
so part of: VCA1004_RS00735
location: complement(150882..151523)
location: region:150882-151523:-1
so has part: feature:150882-151523:-1:exon

WP_086981955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150882-151523:-1:exon

VCA1004_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: gorA
locus tag: VCA1004_RS00740
so part of: sequence
location: complement(151739..153094)
location: region:151739-153094:-1
so has part: feature:151739-153094:-1:exon
subclass of: SO_0000010

position:151739:-1
position: 151739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153094:-1
position: 153094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151739-153094:-1:exon

VCA1004_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: gorA
locus tag: VCA1004_RS00740
EC number: 1.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005421460.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO process: GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione-disulfide reductase
translation: MAKHFDYICIGGGSGGIASANRAAMYGAKVALIEAQDLGGTCVNVGCVPKKVMWHGAQIAEAMHLYAKDYGFDVDVKGFDWNKLVESRQAYIGRIHQSYDRVLGNNKVEVIRGFAKFVDSQTVEVNGEHYTADHILIAVGGRPTIPNIPGAEYGIDSNGFFELNEQPKRVAVVGAGYIAVEIAGVLHALGTDTHLFVRKESPLRSFDPMIIDTLVEVMNTEGPTLHTHSVPKQVVKEADGSLTLHLENGETQNVDTLIWAIGRHPATDAINLDATGVATNERGYIKVDEYQETNVKGIYCVGDIMEGGIELTPVAVKAGRQLSERLFNKKPNAKMDYNLVPTVVFSHPPIGTIGLTEAEAKAQYGEDQVKVYTSGFTAMYTAVTAHRQPCKMKLVCAGSDEKVVGLHGIGFTVDEMIQGFAVAMKMGATKADFDSVVAIHPTGSEEFVTMR
SIO_010081: VCA1004_RS00740
subclass of: SO_0000673
so part of: VCA1004_RS00740
location: complement(151739..153094)
location: region:151739-153094:-1
so has part: feature:151739-153094:-1:exon

WP_086981956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151739-153094:-1:exon

VCA1004_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00745
so part of: sequence
location: complement(153171..154007)
location: region:153171-154007:-1
so has part: feature:153171-154007:-1:exon
subclass of: SO_0000010

position:153171:-1
position: 153171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154007:-1
position: 154007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153171-154007:-1:exon

VCA1004_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000954220.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ
translation: MLSYRHSFHAGNHADVVKHIVQSLILNALKQKEKPFVYHDTHAGVGRYDLTHEWSEKTGEYKQGIARIWQQDLPEEITSYLQAIKTLNEGDELRYYPGSPRVARAHLRQQDRMVLTELHPSDHPLLEQEFHRDRQVSIHKKDGFEHLKASLPPKERRGLVLIDPPYELAHEYQDVVKAIAQSYKRWSTGVYAIWYPVVYRHTIDDMLAGLKDLGIRKILQIELGVSPDSNERGMTASGMIVINPPWKLESQMNEILPLLKQAIAPATGHVKVDWVVPE
SIO_010081: VCA1004_RS00745
subclass of: SO_0000673
so part of: VCA1004_RS00745
location: complement(153171..154007)
location: region:153171-154007:-1
so has part: feature:153171-154007:-1:exon

WP_086981957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153171-154007:-1:exon

VCA1004_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: prlC
locus tag: VCA1004_RS00750
so part of: sequence
location: 154197..156251
location: region:154197-156251:1
so has part: feature:154197-156251:1:exon
subclass of: SO_0000010

position:154197:1
position: 154197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156251:1
position: 156251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154197-156251:1:exon

VCA1004_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: prlC
locus tag: VCA1004_RS00750
EC number: 3.4.24.70
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025326.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligopeptidase A
translation: MSNPLLSFTESKDGLPPFSLITPPHVQPAVEQAIADCRAQVEKVLANEAAPSWATICEPLTETDDRLSRIWSPVSHLNSVKNSTELREVYEACLPLLSEYGTWVGQHKGLYQAYKAVKASDEFSTLSTAQQKSINDALKDFELSGIGLPVDQQKRYGEISKRLSELGSTFSNNVLDATMGWSKHITDESELAGMPESAMAAAKANAEAKELDGWLLTLEMPSYIPVMTYCDNQALRQEMYEAFVTRASDRGPNAGKWDNSEVMAEELKLRHEIARLLGFSSYAEKSLATKMAETPAQVMEFLNNLATKAKPQGEREVEELRQFAEQECGVSELNLWDIAYYSEKQKQKLFQISDEELRPYFPESKVVAGLFEVLNRVFGMTVTEKSGVDTWHESVKFFDITDANGELRGSFYLDLYAREHKRGGAWMDECRVRRRLADGSLQSPVAYLTCNFNKPVGDKPALFTHDEVVTLFHEFGHGIHHMLTQVEVAAVSGINGVPWDAVELPSQFLENWCWEEEALSFISGHYQTGEPLPKEMLDKMLAAKNFQSAMFILRQLEFGLFDFTLHSQYDPDIGAKVLETLAEVKAKVAVLPSLEWNRFSHAFSHIFAGGYSAGYYSYLWAEVLSSDAYSRFEEEGIFNKETGQRFLSHILEMGGSEEPMELFKRFRGREPQIDALLRHAGIEG
SIO_010081: VCA1004_RS00750
subclass of: SO_0000673
so part of: VCA1004_RS00750
location: 154197..156251
location: region:154197-156251:1
so has part: feature:154197-156251:1:exon

WP_086981958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154197-156251:1:exon

VCA1004_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00755
so part of: sequence
location: complement(156441..157316)
location: region:156441-157316:-1
so has part: feature:156441-157316:-1:exon
subclass of: SO_0000010

position:156441:-1
position: 156441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157316:-1
position: 157316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156441-157316:-1:exon

VCA1004_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025327.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0008156 - negative regulation of DNA replication [Evidence IEA]; GO:0043200 - response to amino acid [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ArgP/LysG family DNA-binding transcriptional regulator
translation: MFDYKLLESLERIGALKSFEAASQELNITQSAISQRITNLEQRVGSILVQRGKTLSLTATGQALANHVIKVKQLELELKHLMNDSVKPHALKIVVNADSLATWWFKATKEFNLTHDVMFDIMIEDQSRGLKHLEEGLVLGCLCSSDKPLNGTRCYFVGNMEYRFYCAHHFYQRYFTHPDRQHSINQAPAIIFGSADKLHKQTLQQWGYQTHYPYHICPSSEGLAHMVTNGQGYGLLPVLQAEPFNEQLVDIFPDQPGIQVPLYWHYWHQSGSVLDKLSQLLVGERTKGLIR
SIO_010081: VCA1004_RS00755
subclass of: SO_0000673
so part of: VCA1004_RS00755
location: complement(156441..157316)
location: region:156441-157316:-1
so has part: feature:156441-157316:-1:exon

WP_086981959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156441-157316:-1:exon

VCA1004_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00760
so part of: sequence
location: 157454..158074
location: region:157454-158074:1
so has part: feature:157454-158074:1:exon
subclass of: SO_0000010

position:157454:1
position: 157454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158074:1
position: 158074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157454-158074:1:exon

VCA1004_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025328.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysE/ArgO family amino acid transporter
translation: MFSVALKGAAISGSLIVAIGSQNAFLLKSGLKNNYVMLVATICFLGDVLLISSGILGVGALLHQAPLLTKILTLMGVAFLCWYGLMSAKSAWQGNNQLSIDKKEVNRNWVSVALMTLAMTFLNPHVYIDTIVVLGGITSSLNFDEKKWFLLGSLSASAIWFYGVAYIAKKLIPLFEKPRTWQVLDSVIAVVMFSIALGLVKTLMGS
SIO_010081: VCA1004_RS00760
subclass of: SO_0000673
so part of: VCA1004_RS00760
location: 157454..158074
location: region:157454-158074:1
so has part: feature:157454-158074:1:exon

WP_086981960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157454-158074:1:exon

VCA1004_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00765
so part of: sequence
location: complement(158600..160213)
location: region:158600-160213:-1
so has part: feature:158600-160213:-1:exon
subclass of: SO_0000010

position:158600:-1
position: 158600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160213:-1
position: 160213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158600-160213:-1:exon

VCA1004_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00765
EC number: 4.1.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025329.1
GO function: GO:0004451 - isocitrate lyase activity [Evidence IEA]
GO process: GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isocitrate lyase
translation: MPNTTSPNSYKSQLSEATKAIEGNATWNAITPEYVARMRLQNRFRSGLDIARYTAKLMREDMNAYDQNCANYTQSLGCWHGFIGQQKMISIKKHFETTRGRYLYLSGWMVAAMRSDFGPLPDQSMHEKTSVPMLIEELYTFLKQADARELNHLFKELDSAQAAGDQVKVQALQNQIDNFETHVVPIIADIDAGFGNEEATYLLAKKMIEAGACCIQIENQVSDAKQCGHQDGKVTVPHEDFLAKINAVRYAFLELGVEDGVIVARTDSLGAGLTQKIPVSQTPGDLADQYNAYIDGVEITSLSELNSGDMVLKQGEAVIRPTRLPNGLIRFKPNTGEDRVVLDCITSLQNGADLLWIETEKPHIGQIAGMVNRIREVIPNAKLVYNNSPSFNWTLNFRQQVFDAWSEEGKDVSTYERDQLMNQVYDGSELALAADKKIQNFQRDAAAQAGIFHHLITLPTYHTAALSTDNLAKDYFGEQGMLAYVAGVQRKEIRQGLASVKHQDMSGSNIGDDHKEYFSGEQALKASGDNNTMNQFS
SIO_010081: VCA1004_RS00765
subclass of: SO_0000673
so part of: VCA1004_RS00765
location: complement(158600..160213)
location: region:158600-160213:-1
so has part: feature:158600-160213:-1:exon

WP_086981961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158600-160213:-1:exon

VCA1004_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00775
so part of: sequence
location: complement(160538..162778)
location: region:160538-162778:-1
so has part: feature:160538-162778:-1:exon
subclass of: SO_0000010

position:160538:-1
position: 160538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162778:-1
position: 162778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160538-162778:-1:exon

VCA1004_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00775
EC number: 2.3.3.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004737668.1
GO function: GO:0004474 - malate synthase activity [Evidence IEA]
GO process: GO:0006097 - glyoxylate cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malate synthase G
translation: MNLAQVQPITDDQTHRQAIKPATRHTINAALVQFVNQEVLPLTGLNPTQFWADLDALLTDLTPKNHALLAKRAQLQQQIDDWHKAHPHSAHEQYQDFLRNIGYLVPQGDDFQITTSNVDEEIARLAGPQLVVPIKNARFALNAANARWGSLYDAVYGSDVISHTEGLKAGKKYNPARGQHVIQFAKNFLDQNFPLKQGSHHDVQAYTVYFRHLLATFPDGSQSGLAQPCQFVASSNPDVEPTSIVLKNNGLHIELIINRKGAIGRHDLAGLDDIQVESALSTIMDFEDSIAAVDSEDKIEAYRNWFGLITGNLTANITKGNQTHIRRLNCDRSYTSKNSSSDENGNDYNLHGRSLLLVRNVGHLMTSDLAQDAQGQNMPEGLMDAVITSLIASIEIKNPAACRVTNSRTGSIYIVKPKMHGPEEVEFSNEIFERVEKMLQLPANTIKMGIMDEERRTTVNLKECIRAAQSRVVFINTGFLDRTGDEIHTSMQAGAFKPKADIKHQAWINAYENNNVEIGLACGFAGKAQIGKGMWAMPDEMKAMMTAKIAHPQAGANTAWVPSPTAATLHALHYHQVNVFEQQQTICERTPAKLEDLLSLELLGDNELTQRQVEAELDNNIQGILGYVVRWVEMGIGCSKVPDINNVELMEDRATLRISSQHIANWLLHGICRPEQVMDSMHKMAQVVDAQNVGSEGYQPMMPNVEQSLAFQAARELIFQGRHQPSGYTEPLLHQYRVWAKNELRP
SIO_010081: VCA1004_RS00775
subclass of: SO_0000673
so part of: VCA1004_RS00775
location: complement(160538..162778)
location: region:160538-162778:-1
so has part: feature:160538-162778:-1:exon

WP_086981962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160538-162778:-1:exon

VCA1004_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00780
so part of: sequence
location: 162980..164515
location: region:162980-164515:1
so has part: feature:162980-164515:1:exon
subclass of: SO_0000010

position:162980:1
position: 162980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164515:1
position: 164515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162980-164515:1:exon

VCA1004_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011151832.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3612 domain-containing protein
translation: MKTTNTLNRQSHFLGTKVRNLRKRNGLTLEDLSSRCIKIDPEDAPSVSYLSMIERGKRVPSEGMLEVIAQVFQKPLHWFLDDASEEQEITPEKGSRGGINGMALEPSFLFSNDILQIAIPEMLSQTGTTGHQFAHLLIRAHQEHHQNHFPDLEKAAEQVGQKRMPLAVEDLLDICKDVGVTVKWFDEPSQDVVDSHGVKSKHIVRSYAEAPGVIRINRALKASPEKLKYDLAVHIGHKVLHNSDGEKHVIASDNRNLSTLKPDLTRDVNRLDSTHILQAWRDFECSFFAGALLCPRVPFRQLLDRHGYEISVSQLIGVSESVVMRRMTAVSPYPYWHYFDAYNPGKLKAVYRGNGIPLPWGNMRMVEDPCQHWSVFRMIGIPGNTPVAQISVLNQDGVPHIYCCESVKVKDMAGNYHVLCSGVDLNPALEAQGQDAVEIAKALQKECVRKGGQCVIPYEIKKSLLTVARILNINWIERGIDSEARVICARGGMCPRQPRCYKEKSPTVNVE
SIO_010081: VCA1004_RS00780
subclass of: SO_0000673
so part of: VCA1004_RS00780
location: 162980..164515
location: region:162980-164515:1
so has part: feature:162980-164515:1:exon

WP_086981963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162980-164515:1:exon

VCA1004_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: asnC
locus tag: VCA1004_RS00785
so part of: sequence
location: complement(164595..165059)
location: region:164595-165059:-1
so has part: feature:164595-165059:-1:exon
subclass of: SO_0000010

position:164595:-1
position: 164595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165059:-1
position: 165059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164595-165059:-1:exon

VCA1004_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: asnC
locus tag: VCA1004_RS00785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005394393.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator AsnC
translation: MSEANVRLDDLDRAILKILMADARTPYAEMAKRFDVSPATVHVRVEKMKAAKVIEGTEVVVNEKKLGYDVCCFIGINLNAARDYHSAIEKLNALDEVVEAYYTTGAYNIFVKLMCKNIEELQYVLIDKLQAIDEVQSTETLISLQNPINRSVNP
SIO_010081: VCA1004_RS00785
subclass of: SO_0000673
so part of: VCA1004_RS00785
location: complement(164595..165059)
location: region:164595-165059:-1
so has part: feature:164595-165059:-1:exon

WP_086981964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164595-165059:-1:exon

VCA1004_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00790
so part of: sequence
location: 165372..167576
location: region:165372-167576:1
so has part: feature:165372-167576:1:exon
subclass of: SO_0000010

position:165372:1
position: 165372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167576:1
position: 167576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165372-167576:1:exon

VCA1004_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00790
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MLFFALGFLLIAGVALVAGFRWSHYLKQKRKERQHHQHLLESVYNLSYQGIGVVDEHAHLISSNLTLKELVSAPQFDYEQPVWAFAGWSEVSKNKVQQALEDVKKRGIVRFEGELIDSRIGPAVFDITIKKLPNIDNSGRYYLFEGKDITAKKQAEKQLLESEARFRTYYDLQPVMMLTVDEHDIIQAANKFTAELLGYSLEQLLGHKLQEFYCSSSQLTAQLTLGQVKPPQLTESTTPFVVRREIRYLDVNKRTVWIRENIRQIPATQQLLIVGEDISEMHLLAETLDFQAHHDLLTSLYNRNHFEQELARALLEVKQQNRSHGLLYLDLDQFKLINDTVGHEAGDAAIIYSAQLLTDITPPSAELARTGGDEFAILLRDTNENELIQFAQKVLHAFKINHFTWNGIHFNLNCSIGLRLIDHSATSTQQIHAQVDTACHLAKEEGRNRAHLYRADDENLRHRELEMECVNQVYDALAHDRVDLYAQPIIDLATTPSENMYFEVLVRLRDKDNRLISPGIFMPAIERYNLAHLIDRAVFEKTLTWFEARPEIVARLARCSINLSGQSMGDKDFVGFLIERIKNTSLPTSKLCIEITETAAVGNMKDAMDFFTQLKALGCMIALDDFGSGLSSFAYLKTLPLDIVKIDGCFVRDMHQDEMDRVLVKSIHDLVKQLGKKTVAEFVENEEILAELISMEVDYAQGYLISEPLPLEQLVKRMMNRPVFHDTSHLLSHS
SIO_010081: VCA1004_RS00790
subclass of: SO_0000673
so part of: VCA1004_RS00790
location: 165372..167576
location: region:165372-167576:1
so has part: feature:165372-167576:1:exon

WP_164520807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165372-167576:1:exon

VCA1004_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00795
so part of: sequence
location: 167606..168385
location: region:167606-168385:1
so has part: feature:167606-168385:1:exon
subclass of: SO_0000010

position:167606:1
position: 167606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168385:1
position: 168385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167606-168385:1:exon

VCA1004_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017052099.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MQLRLCCDDPQKQPELNAIAERWQLTHQQDSQFALVLTEERLELRKLDEPKLGAIYVDLAGGAVAHRRKFGGGKGQAIAKAAGLNKGVTPSVLDATAGLGRDAFVLASLGCYVQMVERNPVVAALLDDGLTRAKQDPEIGSWVSERMQLLHASSHDALLQLCEQSDFVRPDVVYLDPMYPHPENKKKSALVKKEMRVFQSLVGADNDADALLEPALALATKRVVVKRPDYAPWLAQQQPNMAIETKKNRFDVYVLNSMV
SIO_010081: VCA1004_RS00795
subclass of: SO_0000673
so part of: VCA1004_RS00795
location: 167606..168385
location: region:167606-168385:1
so has part: feature:167606-168385:1:exon

WP_086981966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167606-168385:1:exon

VCA1004_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00800
so part of: sequence
location: 168555..169064
location: region:168555-169064:1
so has part: feature:168555-169064:1:exon
subclass of: SO_0000010

position:168555:1
position: 168555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169064:1
position: 169064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168555-169064:1:exon

VCA1004_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025336.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RimK/LysX family protein
translation: MKYSHVLFSALLLLPLSVTAAEPQTDVAQLLQNKIVVGQKEWVTVLNTEQRTIAKIDTGATTSSINAIDIHDFERDGKDMVSFKIKAKDKVSKEITLPVQRWVHIKQSSSTKTSRRPIVELDIKLGDKTYTTPFNLVDRDHMINAILIGRSFLNPIALVDVEQKYIYRK
SIO_010081: VCA1004_RS00800
subclass of: SO_0000673
so part of: VCA1004_RS00800
location: 168555..169064
location: region:168555-169064:1
so has part: feature:168555-169064:1:exon

WP_086981967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168555-169064:1:exon

VCA1004_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00805
so part of: sequence
location: 169273..169983
location: region:169273-169983:1
so has part: feature:169273-169983:1:exon
subclass of: SO_0000010

position:169273:1
position: 169273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169983:1
position: 169983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169273-169983:1:exon

VCA1004_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00805
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKSLCKLSRRDIKAGNIEKLVVDAKFYCRSCARTSNQKNVLCHPSTLSNNARRVASQKTISTKVKNRHQSEQQAHNISQVVAKAKALKAQRDSLLHADAHIPAKIEVKADGVNVVTPLTLTAKPKAQIESIQPNALTSLSLNLKQVKVSLKAQKKQQKQLKKLLKKQRQAVKKHKKLLKQEHKLLKQETKLAKQQQKMSQREERIEKQLAKFARDSSFNITPLLKQPKPAIKALH
SIO_010081: VCA1004_RS00805
subclass of: SO_0000673
so part of: VCA1004_RS00805
location: 169273..169983
location: region:169273-169983:1
so has part: feature:169273-169983:1:exon

WP_086981968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169273-169983:1:exon

VCA1004_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00810
so part of: sequence
location: complement(170061..170924)
location: region:170061-170924:-1
so has part: feature:170061-170924:-1:exon
subclass of: SO_0000010

position:170061:-1
position: 170061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170924:-1
position: 170924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170061-170924:-1:exon

VCA1004_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025338.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxylate/amino acid/amine transporter
translation: MFYLSAVTILWAFSFSLIGVYLAGQVDAWFSVWMRIALAGLIFLPFLKFKAIPRTLIAKLMAIGGVQLGLMYCFYYQSFLLLSVPEVLLFTVFTPIYVTLIYDLLKGRFSPWYLITAAIAVSGAAIIKFAGVNSHFISGFLVVQGANICFALGQVGYKHVMEQSPVELSQRTVFGYFYIGAFIVASVAFALLGNPAKLPTTHLQWGILTYLGFIASGLGYFLWNKGACMVNSGALAIMNNALVPAGLLVNIVIWNRDVDMGRLLLGGGVIMLSLWVNESWVKKKALA
SIO_010081: VCA1004_RS00810
subclass of: SO_0000673
so part of: VCA1004_RS00810
location: complement(170061..170924)
location: region:170061-170924:-1
so has part: feature:170061-170924:-1:exon

WP_086981969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170061-170924:-1:exon

VCA1004_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00815
so part of: sequence
location: complement(171036..171461)
location: region:171036-171461:-1
so has part: feature:171036-171461:-1:exon
subclass of: SO_0000010

position:171036:-1
position: 171036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171461:-1
position: 171461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171036-171461:-1:exon

VCA1004_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020331882.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MTYKHILVAVDLSDDSEILVKKAADLAKACDAKLSLIHIDVNFTDMYTGFMEINFAETQNAMLESAQKKIQTLVKAINYPISETIVSSGDLCNEIANAIEGIHVDLVLCGHHKDFWSKLLSTSRQLINDTSVDMLIVPLED
SIO_010081: VCA1004_RS00815
subclass of: SO_0000673
so part of: VCA1004_RS00815
location: complement(171036..171461)
location: region:171036-171461:-1
so has part: feature:171036-171461:-1:exon

WP_086981970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171036-171461:-1:exon

VCA1004_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ftnA
locus tag: VCA1004_RS00820
so part of: sequence
location: 171747..172277
location: region:171747-172277:1
so has part: feature:171747-172277:1:exon
subclass of: SO_0000010

position:171747:1
position: 171747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172277:1
position: 172277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171747-172277:1:exon

VCA1004_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ftnA
locus tag: VCA1004_RS00820
EC number: 1.16.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025340.1
GO function: GO:0008199 - ferric iron binding [Evidence IEA]
GO process: GO:0006879 - cellular iron ion homeostasis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-heme ferritin
translation: MLSNAMVEQLNEQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRKHATEEMEHMQRLFTYVSETGGLPIIGAIDAPKHEFNGLGEVFRETYEHEKMITQCINKLAHVAFTSQDYSTFNFLQWYVAEQHEEEKLFKGILDKLELVGEDGKALFFIDKDLAELAKQGTSSVMAGSATV
SIO_010081: VCA1004_RS00820
subclass of: SO_0000673
so part of: VCA1004_RS00820
location: 171747..172277
location: region:171747-172277:1
so has part: feature:171747-172277:1:exon

WP_086981971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171747-172277:1:exon

VCA1004_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: uspB
locus tag: VCA1004_RS00825
so part of: sequence
location: 172346..172669
location: region:172346-172669:1
so has part: feature:172346-172669:1:exon
subclass of: SO_0000010

position:172346:1
position: 172346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172669:1
position: 172669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172346-172669:1:exon

VCA1004_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: uspB
locus tag: VCA1004_RS00825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001961051.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein UspB
translation: MISADTLLTALALVTLINFIRYITTLRSLIFIMREAHPLLYQQVDGRGFFSSQSNFPKQVRLYHYLKDKEYLHHHEEVFIYKCSKVRELFVLTSGLALLTLVMAFMA
SIO_010081: VCA1004_RS00825
subclass of: SO_0000673
so part of: VCA1004_RS00825
location: 172346..172669
location: region:172346-172669:1
so has part: feature:172346-172669:1:exon

WP_086981972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172346-172669:1:exon

VCA1004_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00830
so part of: sequence
location: 172795..173982
location: region:172795-173982:1
so has part: feature:172795-173982:1:exon
subclass of: SO_0000010

position:172795:1
position: 172795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173982:1
position: 173982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172795-173982:1:exon

VCA1004_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00830
EC number: 1.14.13.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010433467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MNGHYEVVIIGAGAAGLMCAAEAGKRGRSVLIVDHAKKPGRKILISGGGRCNFTNYDVSANNYLCQNPHFVKSALSQYTNWDFISLVSKYGIEYEEREHGQLFCVDSAKHIVDMLLQECDLPNVSQRYRCDVQDIEKTETGFRFKADTDTITCDSLVVATGGLSMPKLGATPFGYKIAEQFGLSVVSTSAGLVPFTLHKEDKEDFAELSGIAIPAEITAQDGTLFKEALLFTHRGLSGPSVLQISSYWKAGQTVTINLIPEADVLDLFIQSREKHPNQSLKNTLAKVLPKRLVEVLIERKVLEDKPLKQFNEKQLHEIDQQLQHWQVLPNGTEGYRTAEVTLGGVDTQHLSSKTMECKQVPGLYFVGEVMDVSGWLGGYNFQWAWSSGFVAGQWV
SIO_010081: VCA1004_RS00830
subclass of: SO_0000673
so part of: VCA1004_RS00830
location: 172795..173982
location: region:172795-173982:1
so has part: feature:172795-173982:1:exon

WP_086981973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172795-173982:1:exon

VCA1004_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00835
so part of: sequence
location: 174118..174588
location: region:174118-174588:1
so has part: feature:174118-174588:1:exon
subclass of: SO_0000010

position:174118:1
position: 174118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174588:1
position: 174588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174118-174588:1:exon

VCA1004_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008079959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Dps family protein
translation: MEKNMIGLDKKQTVVLADELNQLLADYQILYMNVRGYHWNIKGRDFFELHVKFEEIYNDLVVKVDEIAERILTLGSTPVHGFSRYLAMSELDETLNVSNGADAVGHILSAYRMLLAKQRHIVKSAAEVDDEGTVSLMSDYISQQEKEVWMLNAYLQ
SIO_010081: VCA1004_RS00835
subclass of: SO_0000673
so part of: VCA1004_RS00835
location: 174118..174588
location: region:174118-174588:1
so has part: feature:174118-174588:1:exon

WP_086981974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174118-174588:1:exon

VCA1004_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00840
so part of: sequence
location: complement(174663..175148)
location: region:174663-175148:-1
so has part: feature:174663-175148:-1:exon
subclass of: SO_0000010

position:174663:-1
position: 174663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175148:-1
position: 175148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174663-175148:-1:exon

VCA1004_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006070301.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine repressor
translation: MNKNMPQQHFNETNPSLIEACKKLLKQQSFANQNDIRKKLIDMGYNGISQSTISRLLTQLGVIKVRNAKGEKVYCITLESSPVRVQSSILSQIEFINHNQHNVIIKTYPGSAQLIARLLDNNPHLDILGTIAGNDTILIIPADINKVERCERLIKESLGMS
SIO_010081: VCA1004_RS00840
subclass of: SO_0000673
so part of: VCA1004_RS00840
location: complement(174663..175148)
location: region:174663-175148:-1
so has part: feature:174663-175148:-1:exon

WP_086981975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174663-175148:-1:exon

VCA1004_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: argF
locus tag: VCA1004_RS00845
so part of: sequence
location: complement(175505..176509)
location: region:175505-176509:-1
so has part: feature:175505-176509:-1:exon
subclass of: SO_0000010

position:175505:-1
position: 175505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176509:-1
position: 176509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175505-176509:-1:exon

VCA1004_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: argF
locus tag: VCA1004_RS00845
EC number: 2.1.3.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005318430.1
GO function: GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO process: GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ornithine carbamoyltransferase
translation: MAFNLRNRNFLKLLDFTPREIQHFLDLSLELKKAKYAGYEQPRLKGKNIALIFEKTSTRTRCAFEVAAFDQGAQVSYLGPSGSQIGHKESMKDTARVLGRMYDGIEYRGFGQDIVEELGAHAGVPVWNGLTNEFHPTQILADFLTMLEHGRGKKLHEIKFAYLGDARNNMGNSLMVGAAKMGMEISLIAPRQFWPEEELYKQCLEIAEQTGAKINLTEHVEAGVKDCDFLYTDVWVSMGEAKEAWDERVKLMTPYQVNMDVIKATNNPHVKFMHCLPAFHNEETTVGKDVAEKYGMSGLEVTEDVFESDYSIVFDEAENRMHTIKAVMVATLGD
SIO_010081: VCA1004_RS00845
subclass of: SO_0000673
so part of: VCA1004_RS00845
location: complement(175505..176509)
location: region:175505-176509:-1
so has part: feature:175505-176509:-1:exon

WP_086981976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175505-176509:-1:exon

VCA1004_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: arcC
locus tag: VCA1004_RS00850
so part of: sequence
location: complement(176579..177490)
location: region:176579-177490:-1
so has part: feature:176579-177490:-1:exon
subclass of: SO_0000010

position:176579:-1
position: 176579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177490:-1
position: 177490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176579-177490:-1:exon

VCA1004_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: arcC
locus tag: VCA1004_RS00850
EC number: 2.7.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010320356.1
GO function: GO:0008804 - carbamate kinase activity [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamate kinase
translation: MMKKTVVVALGGNALLRRGEPLEADIQRENIKIAVESIAEIAQHYNVVLVHGNGPQVGLLALQGLEYTKVNPYPLDVLGSETQGMIGYMLMQEFKNRLPELDVSCLLTQMTVDPNDPAFSDPTKPIGPVYEEAEARQLAEKYNWIIKPDGQYFRRVVPSPQPTGIVESAAITKLIESGNLVICTGGGGIPVIKQNGKLTGIEAVIDKDMSAAYLARQLNADALLILTDADAVYTHWGTPQQQAIRATTPQQLSQYQFDEGSMGPKIAASCEFVKQGGQLVGIGALQDGLRILEGKAGTCITKD
SIO_010081: VCA1004_RS00850
subclass of: SO_0000673
so part of: VCA1004_RS00850
location: complement(176579..177490)
location: region:176579-177490:-1
so has part: feature:176579-177490:-1:exon

WP_086981977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176579-177490:-1:exon

VCA1004_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: arcA
locus tag: VCA1004_RS00855
so part of: sequence
location: complement(177542..178762)
location: region:177542-178762:-1
so has part: feature:177542-178762:-1:exon
subclass of: SO_0000010

position:177542:-1
position: 177542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178762:-1
position: 178762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177542-178762:-1:exon

VCA1004_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: arcA
locus tag: VCA1004_RS00855
EC number: 3.5.3.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006878358.1
GO function: GO:0016990 - arginine deiminase activity [Evidence IEA]
GO process: GO:0019546 - arginine deiminase pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine deiminase
translation: MSNLYVGSEIGQLRRVLVHRPRRALTHLTPSNCHDLLFDDVLAVEDAGKEHDIFVNTLKSQGVEVLLLTDLLADTLGVAEAKEWLLSTQISKYRFGETFANDVRCFLSDLPNLELAKILTGGLTFGEMPMKSSSMLQSMYGPNDFIIEPLPNHLFTRDTSCWVYGGVSINPMAKTARQRETNHLRAIYRWHPTFAGQDFIKYYGDEEKNYDRSTIEGGDVLVIGRGAVLIGLSERTTAQGVEQLASSLFKHNQAKQVIAIELPKDRSCMHLDTVMTHMREDTFSVYPNVIPNDANCWSLTGDESGKVVTKQQDSYIHTIEKALHVDKLNMITTGGDSFEAEREQWNDANNVLTVSPGVVVGYERNTYTNEKYDKAGITVLPIPSDELGRGRGGARCMSCPIERDGI
SIO_010081: VCA1004_RS00855
subclass of: SO_0000673
so part of: VCA1004_RS00855
location: complement(177542..178762)
location: region:177542-178762:-1
so has part: feature:177542-178762:-1:exon

WP_086981978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177542-178762:-1:exon

VCA1004_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00860
so part of: sequence
location: complement(179258..180703)
location: region:179258-180703:-1
so has part: feature:179258-180703:-1:exon
subclass of: SO_0000010

position:179258:-1
position: 179258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180703:-1
position: 180703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179258-180703:-1:exon

VCA1004_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011217265.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YfcC family protein
translation: MSSQTAHPDNIEEKKGGFKFPSAYTILFILIALVAGLTWVVPSGQYDRVINEDLGKEVPIAGTYHPTESTPQGIVDVLMAPINGFYNSSTYEANAIDVSLFILVIGGFLGLVNSTGAIDAGIQKVTSRLKGKEEMMIPILMFLFALGGTVYGMAEESLPFYTLLVPVMMGARFDSVVSAATVLLGAGIGTLGSLMNPFATVIAADAAGIAFTDGIVVRAIILVLGWALCVFYVMRYARAVRNDPTKSLVYDKAEENKRFFLGNKGEEDLEFTPKRKIILAIFTLAFGIMIYGVSVSGWWMAELSALFLGASIIIGLVGRLSEEELTSNFIDGARDLLGVALIIGIARGIVVVMDAGGVTDTILHLAEEAVSGLSSIIFINVVYLLEILLSFLVPSSSGLAVLTMPIMAPLADFAGVGRDLVVTAYQSASGLVNLVTPTSAVVMGGLAISRVPYLRWVKWVMPLLFWLCLMIMITLSISSML
SIO_010081: VCA1004_RS00860
subclass of: SO_0000673
so part of: VCA1004_RS00860
location: complement(179258..180703)
location: region:179258-180703:-1
so has part: feature:179258-180703:-1:exon

WP_086981979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179258-180703:-1:exon

VCA1004_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00865
so part of: sequence
location: 181324..182787
location: region:181324-182787:1
so has part: feature:181324-182787:1:exon
subclass of: SO_0000010

position:181324:1
position: 181324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182787:1
position: 182787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181324-182787:1:exon

VCA1004_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00865
inference: COORDINATES: protein motif:HMM:NF013132.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO process: GO:0006820 - monoatomic anion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DASS family sodium-coupled anion symporter
translation: MSVLVKESVIPGSSRYLGLVLGPLVLIFTLVFPVPFEGMTESAWRMIGLATFMAIWWVTEAAPIPVTSFLPMILSPLLGTADIKAATAPYANPLIFLFLGGFMLSIAMEKWNLHKRIALIAMLAVGNKPAHQVGGLMLVTAFLSMWMSNTATAVMMLPIGMSIIGIVCGEKRDKNPEFASALLLGIAYAASIGGLATLIGTPPNALLAAYLSTTYHIELGFGQWMLVGLPLTIVMLAITWVWLTKISYKLPNTQSGDAKGLLKEQLHSLGHLSKGEKWVAVVFVGAAVSWIIRPLLAKWTGLPINDTSIAIFAALLLFIIPVNVKKQEFVLDWESTKNLPWGVLLLFGGGLSLAAQIKSSGLADFIGQSLSATNGMPILVVMLIVTAAIIFLTEVTSNTATAAGFLPLLGPIAVAMGAHPAMLAIPAALAASCAFMMPVATPPNSIVFASGQLKIKEMIRAGFVLNVIGIFIITALSYTLAAWVFGM
SIO_010081: VCA1004_RS00865
subclass of: SO_0000673
so part of: VCA1004_RS00865
location: 181324..182787
location: region:181324-182787:1
so has part: feature:181324-182787:1:exon

WP_086981980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181324-182787:1:exon

VCA1004_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00870
so part of: sequence
location: complement(182940..184682)
location: region:182940-184682:-1
so has part: feature:182940-184682:-1:exon
subclass of: SO_0000010

position:182940:-1
position: 182940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184682:-1
position: 184682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182940-184682:-1:exon

VCA1004_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00870
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MMQTSPFRLPNVTPFGLLERAAEKITGLSTLDSYYQQRPKTLDSKVFLRHTLDKLNIHYRLSSGTLADIPNHGPLVIVANHPLGAVEGVILAEMLLKVRRDVKILANQYLKRVPELAPLFISVDVFEGKNAISENIKALRQGVQHLQSGGVLLVFPAGEVSTFDQHGQLNDKPWSRSVAKLLKRSNANALSIYIHGHNSKSFYWAGKVHPYLRTALLGREMLNKSQQIIDISIGEVIDRKEFASLSSEQQLVDYLRLNTYLLAPRAEHQPPTLPQHDPMIEPIPRDQLQQEIQSLPSAAHLLTFKQFEVYCTPSQAIPHLMQEIGRIRERNFRLVNEGTGKACDIDEFDDSYQHLFIWDNEAQCLVGAYRLGLTDRIVQDKGVKGLYSRTLFEYDEKLIAQFGHAIEMGRSVIDLPYQRSLTALMLLWKGIATYAARHPHYTHLFGPVSISSEYSPTARELMVSTLERHHFDQDSANLVKATNPLKKTPNTFWRADMLSSLADIQLLSKVLTRLGQKSLPVLLKQYLNLNGKLISFNVDKNFNEALDGLIVVDLRSVPQRTLAKYMGKEESVEYLKKHKA
SIO_010081: VCA1004_RS00870
subclass of: SO_0000673
so part of: VCA1004_RS00870
location: complement(182940..184682)
location: region:182940-184682:-1
so has part: feature:182940-184682:-1:exon

WP_086981981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182940-184682:-1:exon

VCA1004_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
alternative label: mutU
alternative label: recL
gene: uvrD
locus tag: VCA1004_RS00875
gene synonym: mutU; recL
so part of: sequence
location: 184906..187077
location: region:184906-187077:1
so has part: feature:184906-187077:1:exon
subclass of: SO_0000010

position:184906:1
position: 184906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187077:1
position: 187077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184906-187077:1:exon

VCA1004_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
alternative label: mutU
alternative label: recL
gene: uvrD
locus tag: VCA1004_RS00875
gene synonym: mutU; recL
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006957633.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA helicase II
translation: MDPSLLLDGLNDRQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLLTVEQASPFSIMSVTFTNKAAKEMRGRIEELMMGTSSGMWNGTFHGICHRILRAHYMDAKLPEDFQILDSEDQIRLLRRLIKAQNLDEKQYPAKQASWWINAKKDEGLRPSHIDTYHDPVAKTYLQIYQAYQEACDRAGLVDFAEILLRCHELLRDKVHVREHYQARFKHILVDEFQDTNNIQYAWLRMMAGPDAHVMIVGDDDQSIYGWRGAQIENIQKFLREFPGAHTIRLEQNYRSTKNILNAANELISNNTERMGKDLWTDGQDGEPISLYSAYNDLDEARFAVNKIKEWHEKGTPLVDCAMLYRNNAQSRVLEEALIQARLPYRIYGGMRFFERQEIKDALGYLRLMNNRNDDAAFERIVNTPTRGLGEKTLETIRMTARDRGTTLWQAGVQLIEEKVLSGRAASSFSRFIELINALEDDTFDLALHEQFDQVIKSSGLFTMYEMEKGEKSKARIENLEELVTAARQFEKPEEADDMSMLSAFLSHAALEAGEGQADEFTDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPNQMSAEDAARLEEERRLCYVGMTRAMEKLYITYAEMRRVYGQDKYHKPSRFIREIPESCVDEVRMKAQVSRPVTSGRFAASAVKDNFNSTGYSLGQRVKHAKFGEGTIINFEGSGAQSRVQVAFNGEGIKWLVTEYARLEKL
SIO_010081: VCA1004_RS00875
subclass of: SO_0000673
so part of: VCA1004_RS00875
location: 184906..187077
location: region:184906-187077:1
so has part: feature:184906-187077:1:exon

WP_086981982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184906-187077:1:exon

VCA1004_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fieF
locus tag: VCA1004_RS00880
so part of: sequence
location: 187111..188010
location: region:187111-188010:1
so has part: feature:187111-188010:1:exon
subclass of: SO_0000010

position:187111:1
position: 187111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188010:1
position: 188010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187111-188010:1:exon

VCA1004_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fieF
locus tag: VCA1004_RS00880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025354.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: FieF, a metal efflux transporter, is a member of the CDF (cation diffusion facilitator) family of transporters.; FieF, a metal efflux transporter, is a member of the CDF (cation diffusion facilitator) family of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDF family cation-efflux transporter FieF
translation: MDKNYAKLVNSAAWAAMIIATVLLVVKLIAWWQTNSVSLLASLVDSLLDMAASLTNLLVVRYATQPADKEHQFGHGKAESLAALAQAMFISGSACFLLLNGVDRFFRPQALVSPELGVWVSGFAILMTSSLVLFQKHVVRKTGSQAIAADSLHYQTDLFMNIAIMIALVLSWYGLKQADAVFAMGIGVYILYSAYQMAHEAIQSLLDRQLPQEEVEAISNACISVEGVLGAHDLRTRMSGPVRFIQVHIELDDHLPLLKAHQISDAVEAKLYALFPHSDVIIHQDPISVVPSAKEQPVN
SIO_010081: VCA1004_RS00880
subclass of: SO_0000673
so part of: VCA1004_RS00880
location: 187111..188010
location: region:187111-188010:1
so has part: feature:187111-188010:1:exon

WP_086981983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187111-188010:1:exon

VCA1004_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pfkA
locus tag: VCA1004_RS00885
so part of: sequence
location: 188364..189326
location: region:188364-189326:1
so has part: feature:188364-189326:1:exon
subclass of: SO_0000010

position:188364:1
position: 188364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189326:1
position: 189326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188364-189326:1:exon

VCA1004_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pfkA
locus tag: VCA1004_RS00885
EC number: 2.7.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014233238.1
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phosphofructokinase
translation: MVKKIGVLTSGGDAPGMNAAIRGVVRTALSKGIEVCGIYDGYLGLYEGKIKQLDRSSVSDVINRGGTFLGSARFPEFRDEAVRAKAIENLKEHGIDALVVIGGDGSYMGAKKLTEMGFPCIGLPGTIDNDIAGTDYTIGYFTALNTVIDAIDRLRDTSTSHQRISIVEIMGRHCGDLTLMSAIAGGCEYIITPEHKLNKEELIKSVKAGIEKGKKHAIIALAELITDANELAKDIEAATGRETRATVLGHIQRGGCPTAFDRILASRMGNYAVHLLLEGHGGRCVGIQREQLVHHDIIDAIENMKRPLHEELYSVAEELF
SIO_010081: VCA1004_RS00885
subclass of: SO_0000673
so part of: VCA1004_RS00885
location: 188364..189326
location: region:188364-189326:1
so has part: feature:188364-189326:1:exon

WP_086981984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188364-189326:1:exon

VCA1004_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tpiA
locus tag: VCA1004_RS00890
so part of: sequence
location: complement(189479..190249)
location: region:189479-190249:-1
so has part: feature:189479-190249:-1:exon
subclass of: SO_0000010

position:189479:-1
position: 189479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190249:-1
position: 190249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189479-190249:-1:exon

VCA1004_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tpiA
locus tag: VCA1004_RS00890
EC number: 5.3.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012549122.1
GO function: GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: triose-phosphate isomerase
translation: MRQPVVMGNWKLNGSKEMVVDLLTGLNAELEGVTGVDVAVAPPALFVDLAERTLTEAGSAIILGAQNTDLHNSGAFTGDMSPAMLKEFGATHIIIGHSERREYHNESDEFIAKKFAFLKENGLTPVLCIGESEAQNEAGETVAVCARQIDAVINLLGVDALNGAIIAYEPIWAIGTGKAATADDAQRTHAQIRAHIAEKSEEVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAALDAKSFAAIAKAAAEAKA
SIO_010081: VCA1004_RS00890
subclass of: SO_0000673
so part of: VCA1004_RS00890
location: complement(189479..190249)
location: region:189479-190249:-1
so has part: feature:189479-190249:-1:exon

WP_086981985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189479-190249:-1:exon

VCA1004_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00895
so part of: sequence
location: 190558..190917
location: region:190558-190917:1
so has part: feature:190558-190917:1:exon
subclass of: SO_0000010

position:190558:1
position: 190558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190917:1
position: 190917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190558-190917:1:exon

VCA1004_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001133286.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-carboxymethyl-2-hydroxymuconate isomerase
translation: MPNVVMEYSNSIEERINTQALLEDLHQVTIQSGLFEIQDVKSRTLRTHHWLVGDLDNEVDFIHITVELLDGRTDEQKLALAQSLMATLQAKASFVASLTVNIRDMDRKCFQKVTNLSSH
SIO_010081: VCA1004_RS00895
subclass of: SO_0000673
so part of: VCA1004_RS00895
location: 190558..190917
location: region:190558-190917:1
so has part: feature:190558-190917:1:exon

WP_086981986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190558-190917:1:exon

VCA1004_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00900
so part of: sequence
location: 190928..191353
location: region:190928-191353:1
so has part: feature:190928-191353:1:exon
subclass of: SO_0000010

position:190928:1
position: 190928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191353:1
position: 191353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190928-191353:1:exon

VCA1004_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009386805.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF805 domain-containing protein
translation: MTIKQWLFSFQGRISRQRFWMWNLFYYLVMMGLIGIGAQNISSHYTELVILIASAALLFPDLAVTAKRWHDRNKSNRWLLMHVPLVLGRLMVPTEAAATSSSSSVQLVVSLLALICGIWMLIECGFMKGTQGENQYGAEPE
SIO_010081: VCA1004_RS00900
subclass of: SO_0000673
so part of: VCA1004_RS00900
location: 190928..191353
location: region:190928-191353:1
so has part: feature:190928-191353:1:exon

WP_086981987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190928-191353:1:exon

VCA1004_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00905
so part of: sequence
location: complement(191433..192053)
location: region:191433-192053:-1
so has part: feature:191433-192053:-1:exon
subclass of: SO_0000010

position:191433:-1
position: 191433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192053:-1
position: 192053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191433-192053:-1:exon

VCA1004_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017049219.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MKTSDKILDIIKREGQITARQLAEHLSITTMGARQHLQMLENEGLISFNDIKMKVGRPARHWSLTQLGHNQFIDRHQDLSIDILTSIDEVFGLPGIEQITAQREAKILRRYQQYLSHFHTTEERLRALVQLREQDGYMAELEVTATGYFLTENHCPICFAAKQCPQLCRSELNIFQTLFKDECDIQRQEHIIQGAHRCRYKITLHL
SIO_010081: VCA1004_RS00905
subclass of: SO_0000673
so part of: VCA1004_RS00905
location: complement(191433..192053)
location: region:191433-192053:-1
so has part: feature:191433-192053:-1:exon

WP_086981988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191433-192053:-1:exon

VCA1004_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: glpX
locus tag: VCA1004_RS00910
so part of: sequence
location: complement(192252..193259)
location: region:192252-193259:-1
so has part: feature:192252-193259:-1:exon
subclass of: SO_0000010

position:192252:-1
position: 192252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193259:-1
position: 193259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192252-193259:-1:exon

VCA1004_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: glpX
locus tag: VCA1004_RS00910
EC number: 3.1.3.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001887310.1
GO function: GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class II fructose-bisphosphatase
translation: MKRDLALAFSRVTEGAALAGYKWLGRGDKNAADGAAVAVMRTLLNKTEISGEIVIGEGEIDEAPMLYIGEQVGLGGDAVDIAVDPIEGTRMTAMGQSNALAVLAAGEKGSFLKAPDMYMEKLVVGPGAKGCIDLNKSVEENIRNVAKALNKPLHELTVITLAKPRHDQVIANIQNMGARVFAVPDGDVAASILTCMPDSEVDMMYCIGGAPEGVVSAAVIRALDGDMQGRLLPRHEVKGDSEENRIHGELELKRCAEMGVHANVVLKMDDMAHSDNVVFAATGITKGDLLEGITRKGNIATTETLVIRGKSRTIRRIKSIHYLERKDDDVKDHLL
SIO_010081: VCA1004_RS00910
subclass of: SO_0000673
so part of: VCA1004_RS00910
location: complement(192252..193259)
location: region:192252-193259:-1
so has part: feature:192252-193259:-1:exon

WP_086981989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192252-193259:-1:exon

VCA1004_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: zapB
locus tag: VCA1004_RS00915
so part of: sequence
location: 193570..193812
location: region:193570-193812:1
so has part: feature:193570-193812:1:exon
subclass of: SO_0000010

position:193570:1
position: 193570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193812:1
position: 193812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193570-193812:1:exon

VCA1004_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: zapB
locus tag: VCA1004_RS00915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000007389.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO process: GO:0090529 - cell septum assembly [Evidence IEA]; GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapB
translation: MSFEVLEQLEAKIQTAVDTIALLQMEVEELKEKNEQLASEAGQLREGRAELEQQTQAMRQEQQAWQERVRNLLGKMDDVE
SIO_010081: VCA1004_RS00915
subclass of: SO_0000673
so part of: VCA1004_RS00915
location: 193570..193812
location: region:193570-193812:1
so has part: feature:193570-193812:1:exon

WP_086981990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193570-193812:1:exon

VCA1004_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rraA
locus tag: VCA1004_RS00920
so part of: sequence
location: complement(193917..194441)
location: region:193917-194441:-1
so has part: feature:193917-194441:-1:exon
subclass of: SO_0000010

position:193917:-1
position: 193917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194441:-1
position: 194441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193917-194441:-1:exon

VCA1004_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rraA
locus tag: VCA1004_RS00920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025363.1
GO function: GO:0008428 - ribonuclease inhibitor activity [Evidence IEA]
GO process: GO:0051252 - regulation of RNA metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease E activity regulator RraA
translation: MEYNTSALCDIYQDQVDVVEPMFSNFGGLTSFSGQLTTVKCFEDNGIIRTILQEDGAGRVLLIDGGGSLRRALIDAEIAALAEENDWEGLVVYGCVREIDDLEEMEIGIQAIASIPVGATQNNIGEVDVPVNFGGVTFLPEDFLYADNTGVIISQEPLDIELDLDDDELEPLED
SIO_010081: VCA1004_RS00920
subclass of: SO_0000673
so part of: VCA1004_RS00920
location: complement(193917..194441)
location: region:193917-194441:-1
so has part: feature:193917-194441:-1:exon

WP_086981991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193917-194441:-1:exon

VCA1004_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00925
so part of: sequence
location: complement(194647..195558)
location: region:194647-195558:-1
so has part: feature:194647-195558:-1:exon
subclass of: SO_0000010

position:194647:-1
position: 194647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195558:-1
position: 195558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194647-195558:-1:exon

VCA1004_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00925
EC number: 2.5.1.74
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017061151.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1,4-dihydroxy-2-naphthoate polyprenyltransferase
translation: MKSSLAIWLDAARPKTLLLAIAAIATGSSLAYADHHFSYAISLLALLTATLLQILSNLANDYGDAVQGTDNENRIGPIRGMQQGAITQSAMKKAIAINIVFIVISGLVLVFYALQTPTSIAAFIILGFLSIISSIAYTMGSKPYGYIGLGDISVFIFFGLLAILGTYFLHTGTITASLLLPAIGSGLFSMGVLNINNMRDVENDTVSNKRTLVVRIGIARAKCYHLGLLALGWLTMTGYLLMHVQPFWLNLSMLIPLIFVTKHGVTIWKVQQSKQFIPMLPDMVKCAFITNIIFAVTVVLAQQ
SIO_010081: VCA1004_RS00925
subclass of: SO_0000673
so part of: VCA1004_RS00925
location: complement(194647..195558)
location: region:194647-195558:-1
so has part: feature:194647-195558:-1:exon

WP_086981992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194647-195558:-1:exon

VCA1004_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: hslU
locus tag: VCA1004_RS00930
so part of: sequence
location: complement(195684..197021)
location: region:195684-197021:-1
so has part: feature:195684-197021:-1:exon
subclass of: SO_0000010

position:195684:-1
position: 195684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197021:-1
position: 197021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195684-197021:-1:exon

VCA1004_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: hslU
locus tag: VCA1004_RS00930
EC number: 3.4.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019830204.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HslU--HslV peptidase ATPase subunit
translation: MSEMTPREIVHELNQHIIGQDKAKRAVAIALRNRWRRMQLDEALRAEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVESIIRDLTDVSVKLTHQQEMEKVKYRAEEQAEERILDALLPPPREGWGQDEKTSESSSHTRQVFRKKLREGQLDDKEIEVDVAAPQMGVEIMAPPGMEEMTNQLQGMFQNLAGDTKKSRKMKIKDAFKALTEEEAAKLVNQEDLKEQAIFNVENNGIVFIDEIDKICKRADQTGGGDVSREGVQRDLLPLVEGSTVSTKHGMVRTDHILFVASGAFQVARPSDLIPELQGRLPIRVELEALSSHDFKRILTEPHASLTEQYRALMATENVDIEFTEEGITQIAEAAWQVNETTENIGARRLHTVMERLMDEISFDATDNPGMKVAIDGDYVKQRLGEFVADEDLSRFIL
SIO_010081: VCA1004_RS00930
subclass of: SO_0000673
so part of: VCA1004_RS00930
location: complement(195684..197021)
location: region:195684-197021:-1
so has part: feature:195684-197021:-1:exon

WP_086981993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195684-197021:-1:exon

VCA1004_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: hslV
locus tag: VCA1004_RS00935
so part of: sequence
location: complement(197142..197660)
location: region:197142-197660:-1
so has part: feature:197142-197660:-1:exon
subclass of: SO_0000010

position:197142:-1
position: 197142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197660:-1
position: 197660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197142-197660:-1:exon

VCA1004_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: hslV
locus tag: VCA1004_RS00935
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025365.1
GO function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO process: GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease subunit HslV
translation: MTTIVSVRRNNKVVIAGDGQVSLGNTVMKGNAKKVRRLYNDKVLAGFAGGTADAFTLFERFERKLEMHQGHLTKAAVELAKEWRSDRALRKLEALLAVADETASLIITGNGDVVQPERDLIAIGSGGNFAQAAAIALLENTDLEARDIAEKALTIAGDICVFTNHHHTIEEL
SIO_010081: VCA1004_RS00935
subclass of: SO_0000673
so part of: VCA1004_RS00935
location: complement(197142..197660)
location: region:197142-197660:-1
so has part: feature:197142-197660:-1:exon

WP_086981994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197142-197660:-1:exon

VCA1004_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00945
so part of: sequence
location: complement(198109..198690)
location: region:198109-198690:-1
so has part: feature:198109-198690:-1:exon
subclass of: SO_0000010

position:198109:-1
position: 198109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198690:-1
position: 198690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198109-198690:-1:exon

VCA1004_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445271.1
GO function: GO:0042834 - peptidoglycan binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPOR domain-containing protein
translation: MANRDYVRKNPTSNKKNGNRTPKRSASKKKPASRAIPWKAAIIAVILLAGLIALLSKLNNDPEPTVLDNNTVPIAVPEKSKPAESLPPPPQEKWDYMETLPKREIEVQAKEVEIPKIPYIMQCGAYKTPSQAEQRKANIAFQGLSSKVVKLEGSSWYRIILGPYTFKRDAVKEQHVLQRAKIEPCIIMKDTLR
SIO_010081: VCA1004_RS00945
subclass of: SO_0000673
so part of: VCA1004_RS00945
location: complement(198109..198690)
location: region:198109-198690:-1
so has part: feature:198109-198690:-1:exon

WP_086981995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198109-198690:-1:exon

VCA1004_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: cytR
locus tag: VCA1004_RS00950
pseudo: true
so part of: sequence
location: complement(198877..>199685)
location: region:198877-199685:-1
so has part: feature:198877-199685:-1:exon
subclass of: SO_0000010

position:198877:-1
position: 198877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199685:-1
position: 199685
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198877-199685:-1:exon

VCA1004_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: cytR
locus tag: VCA1004_RS00950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004415987.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator CytR
SIO_010081: VCA1004_RS00950
subclass of: SO_0000673
so part of: VCA1004_RS00950
location: complement(198877..>199685)
location: region:198877-199685:-1
so has part: feature:198877-199685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198877-199685:-1:exon

VCA1004_RS15265
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS15265
pseudo: true
so part of: sequence
location: complement(<199740..200120)
location: region:199740-200120:-1
so has part: feature:199740-200120:-1:exon
subclass of: SO_0000010

position:199740:-1
position: 199740
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:200120:-1
position: 200120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199740-200120:-1:exon

VCA1004_RS15265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS15265
inference: COORDINATES: protein motif:HMM:NF012742.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
SIO_010081: VCA1004_RS15265
subclass of: SO_0000673
so part of: VCA1004_RS15265
location: complement(<199740..200120)
location: region:199740-200120:-1
so has part: feature:199740-200120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199740-200120:-1:exon

VCA1004_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: priA
locus tag: VCA1004_RS00960
so part of: sequence
location: complement(200549..202750)
location: region:200549-202750:-1
so has part: feature:200549-202750:-1:exon
subclass of: SO_0000010

position:200549:-1
position: 200549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202750:-1
position: 202750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200549-202750:-1:exon

VCA1004_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: priA
locus tag: VCA1004_RS00960
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017630923.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primosomal protein N'
translation: MQPNIAQVALPVPLDKCFDYLIPNYLFPVIGGRVSVPFGRQTLVGIVINIVDHSDFPREQLKPIKASLDTHPIWPAPLYQLLQWCSQFYQYPLGETLAMALPALLKKGKTADFTSLKTWHLTEAGKNKLIQGFGRAHQQEKVVRLLESSSLPHQAMIDEGISSATLKALQQKGWIEMKHTQPAKTVWPNLIENEQHKPQLNAEQAIAVATINQASGFGCYLIDGVTGSGKTEVYLNLIKPVLAAGKQALVLVPEIGLTPQTINRFKRRFHVPIEVMHSGLNDSERLNAWLAARERQAGIIIGTRSSLFTPFADLGIIIVDEEHDASYKQQDSLRYHARDVAVMRGHKENIPVVLGSATPALESLHNAQSGKYHYLSLTQRAGNASAAKHHVLDIKGLYLEGGLSAPLIAQMRRHLNAGNQVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTYHQGNQEIRCHHCGSQRPVIQQCQGCGSTQLVSVGVGTEQLEKQLEILFPEFKTIRIDRDSTRRKGSLESALESIRSGEYQILIGTQMLAKGHHFPNVTLVGLLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVLLQTHHPEHALLQSLLHKNYQHFAQTALAERKMAQLPPYSFLTLFRAEANHNDNVEAFLRQVRYTLEAHPLFDEQCLVLGPMPAPLAKRAGKFRWQLMLQVSTRSQMQRLLLSSKTAIQLLPLAKKVRWNLDVEPQDLS
SIO_010081: VCA1004_RS00960
subclass of: SO_0000673
so part of: VCA1004_RS00960
location: complement(200549..202750)
location: region:200549-202750:-1
so has part: feature:200549-202750:-1:exon

WP_086981996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200549-202750:-1:exon

VCA1004_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpmE
locus tag: VCA1004_RS00965
so part of: sequence
location: 203019..203237
location: region:203019-203237:1
so has part: feature:203019-203237:1:exon
subclass of: SO_0000010

position:203019:1
position: 203019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203237:1
position: 203237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203019-203237:1:exon

VCA1004_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpmE
locus tag: VCA1004_RS00965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012551187.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MKTGIHPEYKAVSANCSCGNTFEFNTTLDKESIHLDVCDKCHPFYTGKQRIVDTGGRVDRFNKRFGALSSKK
SIO_010081: VCA1004_RS00965
subclass of: SO_0000673
so part of: VCA1004_RS00965
location: 203019..203237
location: region:203019-203237:1
so has part: feature:203019-203237:1:exon

WP_086981997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203019-203237:1:exon

VCA1004_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00970
so part of: sequence
location: 203397..204656
location: region:203397-204656:1
so has part: feature:203397-204656:1:exon
subclass of: SO_0000010

position:203397:1
position: 203397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204656:1
position: 204656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203397-204656:1:exon

VCA1004_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005524317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malic enzyme-like NAD(P)-binding protein
translation: MSDDQQQDDFRQRALNYHAQPTAGKIAIALTKPADTAEDLALAYSPGVAEPVREIALNPDNAYKYTAKGNTVAVISNGTAILGLGNLGPLASKPVMEGKALLFKRFANLDSIDIQVKHRTIDEFIDTVANIADTFGGINLEDIKAPDCFEIERQLIERCDIPVFHDDQHGTAIVTAAGMLNAIELQGKKLSECKIVCLGAGAAAVACMELLIKCGALREKIYMLDRKGVIHTRRDDLNEYKQLFANNTDMRTLEDVIEGADLFLGVSGPNLLPAEALALMADKPVVFACSNPDPEIKPEIATKVRNDLIMGTGRSDYPNQVNNVICFPFIFRGALDVRASEINDEMKLAAVEAIRQLAKQEVPAEVLKAAGVDHLEFGPDYIIPKPMDPRLLSEVAGAVARAAVESGVARIELPEEYKR
SIO_010081: VCA1004_RS00970
subclass of: SO_0000673
so part of: VCA1004_RS00970
location: 203397..204656
location: region:203397-204656:1
so has part: feature:203397-204656:1:exon

WP_086981998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203397-204656:1:exon

VCA1004_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: metJ
locus tag: VCA1004_RS00975
so part of: sequence
location: complement(204813..205130)
location: region:204813-205130:-1
so has part: feature:204813-205130:-1:exon
subclass of: SO_0000010

position:204813:-1
position: 204813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205130:-1
position: 205130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204813-205130:-1:exon

VCA1004_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: metJ
locus tag: VCA1004_RS00975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000796267.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: met regulon transcriptional regulator MetJ
translation: MADWNGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAYTGQPLPTDEDLRKDRPDDIPTEVKRLMTEMGIEFENFDD
SIO_010081: VCA1004_RS00975
subclass of: SO_0000673
so part of: VCA1004_RS00975
location: complement(204813..205130)
location: region:204813-205130:-1
so has part: feature:204813-205130:-1:exon

WP_086981999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204813-205130:-1:exon

VCA1004_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00980
so part of: sequence
location: 205446..206612
location: region:205446-206612:1
so has part: feature:205446-206612:1:exon
subclass of: SO_0000010

position:205446:1
position: 205446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206612:1
position: 206612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205446-206612:1:exon

VCA1004_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025372.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-succinylhomoserine (thiol)-lyase
translation: MSSRKPATVAVRTGIESDSQFHAVVPPIYLSTNYGFPAFGEVPQYDYTRSGNPNRGLLEQALSELEQGAGAVITNCGTSALNLWVSAFIGPDDLIIAPHDCYGGTYRLFNTRAQKGDFKVQFVDQSNQAEFDAALANKPKLILLETPSNPLVRVVDIAQACAKAKQVGALVAVDNTFLTPVYQKPLTLGADFVVHSTTKYINGHSDVIGGVIIAKEAEHAETLAWWGNCIGATGTPFDSYMTLRGLRTLPARMRVHEESAQTLLAYLQQQPLVGTIYHPSLPQHPGHDIAKAQQSGFGSMLSFEINGSMEQLKTFVGQLQLFSLAESLGGVESLMCHPASMTHRAMSDEAQAEAGISPLLLRVSVGLEDSQDLIADLEQAFKKAQEVA
SIO_010081: VCA1004_RS00980
subclass of: SO_0000673
so part of: VCA1004_RS00980
location: 205446..206612
location: region:205446-206612:1
so has part: feature:205446-206612:1:exon

WP_086982000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205446-206612:1:exon

VCA1004_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS00985
so part of: sequence
location: 206613..209027
location: region:206613-209027:1
so has part: feature:206613-209027:1:exon
subclass of: SO_0000010

position:206613:1
position: 206613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209027:1
position: 209027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206613-209027:1:exon

VCA1004_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS00985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010318340.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional aspartate kinase/homoserine dehydrogenase II
translation: MTSARQLHKFGGSSLANPECYKRVANILKEYSSPADIIVVSAAGSTTNRLIDWISALEKDGRIAHEVLQQLRQFQIGLVEELLPEEKAQPLLDLLVAEFTALSDIHGPINDVMRASILGHGEVWSSRLLAALLCHLDMEAAQLDSRDFLRAERGAQPEVDRGRSLPLLKEILAQHGSKRRLVITGFMARNEVGETVLLGRNGSDYSATVIGALAEAKRVTIWSDVAGVYSADPRKVSDACLLPLLRLDEASELARLAAPVLHSRTLQPVAQSAMDLSLRCSYQPESGSTRIERVLASGRGAKIITSLDEVLLVQVNFGSGHDFERLESELLRTLTRAQLQPLATLSQPDQGSVSLAYTAEIAAGALSYLQDTAVGAEIKLLEGYSMVAAVGAGVSNNPNHCYGFYQQLKNAPVEFMCESESGLSLVAILRKTDVAKLVVGIHSQLFQAQKRIAIALCGKGNIGSSWLELFAEQKSELEKRRGMSFDLVAVVDSQTYWLDLKGIDPTQALTRFSDEAVANDGKTWLQTLAHQSDYHEVVVMDVTASEELAGQYEQIAELGMHLICANKVAGSASTQDYLRIMNAFEKTGRHWLYNATVGAGLPVNYAIRDLRNSGDQITAVSGIFSGTLSWLFQQFDGSIPFLELVDLAWQQGLTEPDPRSDLDGSDVMRKLVIVARESGLEIEPENVKVETLVPEELKDLSIDDFFDKGKVLNELLSERLAKAQKQDKVLRYIARLSRDGKATVGVEALSPEHALANLLPCDNVFAIESKWYKDNPLVIKGPGAGRAVTAGALQSDLNRLSNLI
SIO_010081: VCA1004_RS00985
subclass of: SO_0000673
so part of: VCA1004_RS00985
location: 206613..209027
location: region:206613-209027:1
so has part: feature:206613-209027:1:exon

WP_086982001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206613-209027:1:exon

VCA1004_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: metF
locus tag: VCA1004_RS00990
so part of: sequence
location: 209319..210206
location: region:209319-210206:1
so has part: feature:209319-210206:1:exon
subclass of: SO_0000010

position:209319:1
position: 209319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210206:1
position: 210206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209319-210206:1:exon

VCA1004_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: metF
locus tag: VCA1004_RS00990
EC number: 1.5.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025374.1
GO function: GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO process: GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylenetetrahydrofolate reductase
translation: MSYSHAGHIDALNHNVADLAGKINVSFEFFPPSSEKMEETLWNSIHRLKTLQPKFVSVTYGANSGERDRTHSIIKEIKDQTGLIAAPHLTCIDASRDELKEIAQDYWNNGIRDIVALRGDLPPGGGKPDMYAADLVALLKGVADFDISVAAYPEVHPEAKNAQADLINLKRKVDAGANRAITQFFFDVESYLRFRDRCVTAGIEVEIIPGILPVSNYKQAKRFADMTNVRIPSWMAKQYEGLDDDPVTRQMVGASQAIDMVRTLSREGVKDFHFYTLNRSEMTYALCHTLGVRPR
SIO_010081: VCA1004_RS00990
subclass of: SO_0000673
so part of: VCA1004_RS00990
location: 209319..210206
location: region:209319-210206:1
so has part: feature:209319-210206:1:exon

WP_086982002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209319-210206:1:exon

VCA1004_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ppc
locus tag: VCA1004_RS00995
so part of: sequence
location: complement(210432..213062)
location: region:210432-213062:-1
so has part: feature:210432-213062:-1:exon
subclass of: SO_0000010

position:210432:-1
position: 210432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213062:-1
position: 213062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210432-213062:-1:exon

VCA1004_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ppc
locus tag: VCA1004_RS00995
EC number: 4.1.1.31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015297401.1
GO function: GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO process: GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate carboxylase
translation: MNEKYAALKSNVRMLGDLLGATIQEAHGDAILGKVETIRKLSKSARAGNQEARESLVEEIKNLPDDQLTPVAHAFSQFLNLTNIAEQFHTISRHCEEYICEPDAIESLFNKLASNNISQDAAAQAIKELNIELVLTAHPTEIARRTMINKLVKINKCLALLEHSDLSRRERLKTERRLEGLIAQAWHSDVIRQQRPTPLDEAKWGFAVVENSLWQAVPEFLREFNGRVKEFTGESLPIDARPVHFSSWMGGDRDGNPNVTHPITAEVLLLSRWKAADLYFTDIQDLITELSMTACNHKVRELSGEEHEPYRAILKRLRTLLNNTCTVLDARINGKEVPSLPILERVEQLWDPLLACYQSLHECGMSIIAEGSLLDTLRRVNAFGIHLVRLDIRQESTRHADVITEMTRFLEIGDYDQWPEEEKVAFLIKELSSKRPLLPRNWEPSPEVQEVLDTCRVMAEHPREAFGAYVISMARTASDVLAVHLILQECGCKFRMDVCPLFETLDDLNRSEEVMKQLFSLDWYRNFINNHQMVMIGYSDSAKDAGVMAAGWAQYDAMDKLVKVSDAEGIDLTLFHGRGGTVGRGGAPAHAALLSQPPRSLKGGLRVTEQGEMIRFKLGLPDVAVNSFNLYAAAILEANLLPPPEPKKEWRELMQTISDVSCDAYRGVVRGEPDFVPYFRAATPEMELGKLPLGSRPSKRNPNGGVESLRAIPWIFSWSQNRLVLPAWLGAGEAIQHVVNQGHQPMLEEMCREWPFFSTRLGMLEMVYSKCNIDISRYYDHRLTDESLWPLGERLREQLQKDIVTVLNVENNENLMQSDPWGLESIRLRNIYVEPLNMLQAELLYRTRQTDNPSSELEEALMLTIAGIAAGMRNTA
SIO_010081: VCA1004_RS00995
subclass of: SO_0000673
so part of: VCA1004_RS00995
location: complement(210432..213062)
location: region:210432-213062:-1
so has part: feature:210432-213062:-1:exon

WP_086982003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210432-213062:-1:exon

VCA1004_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: argE
locus tag: VCA1004_RS01000
so part of: sequence
location: complement(213324..214493)
location: region:213324-214493:-1
so has part: feature:213324-214493:-1:exon
subclass of: SO_0000010

position:213324:-1
position: 213324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214493:-1
position: 214493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213324-214493:-1:exon

VCA1004_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: argE
locus tag: VCA1004_RS01000
EC number: 3.5.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019827349.1
GO function: GO:0019213 - deacetylase activity [Evidence IEA]
GO process: GO:0006526 - arginine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetylornithine deacetylase
translation: MTIPNFKTVYRDLISTSSISATDPAWDQGNAQVIAKLAQWFEDLDFTVEVIEVAQGKHNLIAKKGQGEGGLLLSGHSDTVPFDEGRWNYNPHALTEDNNRFYGLGTADMKGFFAFILETVRSIDWTNQTKPLYVLATCDEETSMLGARHFTESCLNGDTPYQPDYCIIGEPTSLKPIRAHKGHVANAIRVTGHSGHSSNPALGVNAIEIIHEVLFALMQLRNQLIKQYHHPGFDIPTPTLNLGHIHGGDSANRICGCCELHYDVRPLPGISLDGLNNMLTSALKEVQDKWPGRIDIQPLHEAIPGYECHHDHPFIHSIESLTEMPCETVNYCTEAPFLQQVCPTLVMGPGSIDQAHQPDEFLAFEFIDPTIRLLSKAIQEYCFAGRDAK
SIO_010081: VCA1004_RS01000
subclass of: SO_0000673
so part of: VCA1004_RS01000
location: complement(213324..214493)
location: region:213324-214493:-1
so has part: feature:213324-214493:-1:exon

WP_086982004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213324-214493:-1:exon

VCA1004_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: argC
locus tag: VCA1004_RS01005
so part of: sequence
location: 214804..215805
location: region:214804-215805:1
so has part: feature:214804-215805:1:exon
subclass of: SO_0000010

position:214804:1
position: 214804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215805:1
position: 215805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214804-215805:1:exon

VCA1004_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: argC
locus tag: VCA1004_RS01005
EC number: 1.2.1.38
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004729679.1
GO function: GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO process: GO:0006592 - ornithine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetyl-gamma-glutamyl-phosphate reductase
translation: MLKTVIIGASGYTGAELALMVEKHPQLTLSGLYVSEKSVDAGKPISQLHGKLKGLVDLPVQPLISVGDVATQCDVVFLATAHEVSHDLAPTFLAHDCTVFDLSGAYRVKAEGFYPQYYGFEHTESQWLEKAVYGLAEWNEQQIENAQLIAVPGCYPTASQLAIKPLVEAQLLDLTQWPVINATSGVTGAGRKATMTNSFCEVSLQPYGVFNHRHQPEIAKHLGCDVIFTPHLGNFKRGILATITMKLAAGVTQEQIQQAFISAYQGKPAVRLLDVIPRLQHVENTPFCDIGWKVQGGHIIVVSAIDNLLKGASSQAMQCLNLRYGFPVLTALV
SIO_010081: VCA1004_RS01005
subclass of: SO_0000673
so part of: VCA1004_RS01005
location: 214804..215805
location: region:214804-215805:1
so has part: feature:214804-215805:1:exon

WP_086982005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214804-215805:1:exon

VCA1004_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: argB
locus tag: VCA1004_RS01010
so part of: sequence
location: 215815..216594
location: region:215815-216594:1
so has part: feature:215815-216594:1:exon
subclass of: SO_0000010

position:215815:1
position: 215815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216594:1
position: 216594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215815-216594:1:exon

VCA1004_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: argB
locus tag: VCA1004_RS01010
EC number: 2.7.2.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011262712.1
GO function: GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO process: GO:0006592 - ornithine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetylglutamate kinase
translation: MSINPLVIKLGGAVLSDTDTLALLFQTISHYQQQAQRAVVIVHGGGYLVDELMDKLQLETVKKNGLRVTPFEHINYISGALAGTANKLLQGQAMKLGLNAVGLSLADGGLCQVTQLSQDLGAVGEAKAGEASVLKAILSTGALPIISSIGLTKEGQLMNVNADQAAVAVATALDAELALLSDVSGVLDAKKQLIAQLDQNMADQLIAQGVITDGMIVKVQAALDAAKQLGRAIEVAGWKEPQKLTQLLAGNSIGTRFLP
SIO_010081: VCA1004_RS01010
subclass of: SO_0000673
so part of: VCA1004_RS01010
location: 215815..216594
location: region:215815-216594:1
so has part: feature:215815-216594:1:exon

WP_086982006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215815-216594:1:exon

VCA1004_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01015
so part of: sequence
location: 216702..217934
location: region:216702-217934:1
so has part: feature:216702-217934:1:exon
subclass of: SO_0000010

position:216702:1
position: 216702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217934:1
position: 217934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216702-217934:1:exon

VCA1004_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01015
EC number: 6.3.4.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025380.1
GO function: GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006526 - arginine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: argininosuccinate synthase
translation: MSILSVDKSSVNKVVVAYSGGLDTSVIIPWLKENYECEVVAFVADVGQGEEELVGIKEKAIASGASECYIADLKEEMVADYIYPTLKTGALYEGKYLLGTSMARPIIAKAQVEVARKVGADALCHGCTGKGNDQVRFEGAFAALAPDLHVIAPWREWDLVSREECLDYLAERNIPCTASLTKIYSRDANAWHISTEGGVLENTWNAPNEDCWVWTVDPEQAPNEAEYVTLKVEKGAVVAVDGQALSPYQTLVALNEKGAKHGVGRIDIVENRLVGMKSRGCYETPGGTIMMEALRAVEQLVLDKASFEFREELGVKASHLVYDGRWFTPLCKSLLAATETLAQDVNGEVVVKLYKGQATVTQKRSDNSLYSEEFATFGADEVYDQSHAGGFIRLYSLASRIRALNEAKKK
SIO_010081: VCA1004_RS01015
subclass of: SO_0000673
so part of: VCA1004_RS01015
location: 216702..217934
location: region:216702-217934:1
so has part: feature:216702-217934:1:exon

WP_086982007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216702-217934:1:exon

VCA1004_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: argH
locus tag: VCA1004_RS01020
so part of: sequence
location: 218127..220001
location: region:218127-220001:1
so has part: feature:218127-220001:1:exon
subclass of: SO_0000010

position:218127:1
position: 218127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220001:1
position: 220001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218127-220001:1:exon

VCA1004_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: argH
locus tag: VCA1004_RS01020
EC number: 4.3.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011262710.1
GO function: GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO process: GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: argininosuccinate lyase
translation: MALWGGRFTQAADTRFKQFNDSLRFDYRLAEQDIVGSIAWSKSLLSVGVLTEEEQQKLELALNELKLAVMEDPEQILQSDAEDIHSWVETQLINRVGDLGKKLHTGRSRNDQVATDLKLWCRQQGHQLLIALDRLQSQMVAVAREHQGTVLPGYTHLQRAQPVTFAHWCLAYVEMFERDYSRLSDAIKRLDTCPLGSGALAGTAYPMDREQLAHNLGFQRATRNSLDSVSDRDHVMELMSVASISMLHLSRLAEDMIFYNSGESGFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGSLAAMMMTVKALPLAYNKDMQEDKEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAAKQGYANSTELADYLVAKGIPFREAHHIVGVAVVSAIAKSCALEELSLTELKAFSPVIEEDVYNILTIDSCLEKRSALGGVSPKQVAYAVNQAQKRLDERDNSGVTVRAARLTDIDALEGMVAYWAGLGENLPRSRNELIRDIGSFAVSEHHGEVTGCASLYVYDSGLAEIRSLGIEAGWQGQGQGAAIIKHLVDKARQMAIKKVFVLTRVPEFFMKQEFIPTSKTLLPEKVLKDCDQCPRQHACDEVALEINLNEQVILRVGVA
SIO_010081: VCA1004_RS01020
subclass of: SO_0000673
so part of: VCA1004_RS01020
location: 218127..220001
location: region:218127-220001:1
so has part: feature:218127-220001:1:exon

WP_086982008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218127-220001:1:exon

VCA1004_RS15155
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS15155
so part of: sequence
location: complement(220107..220256)
location: region:220107-220256:-1
so has part: feature:220107-220256:-1:exon
subclass of: SO_0000010

position:220107:-1
position: 220107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220256:-1
position: 220256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220107-220256:-1:exon

VCA1004_RS15155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS15155
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTFIHNMRLIQEGFYAALYFSGEHDTHYYWSENDGNKKPRIETETGRS
SIO_010081: VCA1004_RS15155
subclass of: SO_0000673
so part of: VCA1004_RS15155
location: complement(220107..220256)
location: region:220107-220256:-1
so has part: feature:220107-220256:-1:exon

WP_164520808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220107-220256:-1:exon

VCA1004_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: oxyR
locus tag: VCA1004_RS01025
so part of: sequence
location: 220479..221369
location: region:220479-221369:1
so has part: feature:220479-221369:1:exon
subclass of: SO_0000010

position:220479:1
position: 220479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221369:1
position: 221369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220479-221369:1:exon

VCA1004_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: oxyR
locus tag: VCA1004_RS01025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025385.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator OxyR
translation: MNIRDFEYLVALAEHKHFRKAAEACFVSQPTLSGQIRKLEDELGTSLLERSSRRVLFTDSGLQLVAQAKRVLGEVKTFTEMASLQGKEMSGPLHIGFIPTIGPYILPLIVQPLKKAFPDLELFLHEAQTNQLVRQLEEGRIDCIILASVAETEPFIELDMFDEPLMMAVPENHPWAEKTELDMHELKGHTVLSLGDGHCLRDQALGFCFAAGASDDDRFKATSLETLRNMVAAGGGVTLLPKLSVPKEKVKDGVSYLKAVNPTPSRKVVLAYRPGSPLRKRFEQLADFVTQTVAME
SIO_010081: VCA1004_RS01025
subclass of: SO_0000673
so part of: VCA1004_RS01025
location: 220479..221369
location: region:220479-221369:1
so has part: feature:220479-221369:1:exon

WP_086982009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220479-221369:1:exon

VCA1004_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01030
so part of: sequence
location: complement(221469..224039)
location: region:221469-224039:-1
so has part: feature:221469-224039:-1:exon
subclass of: SO_0000010

position:221469:-1
position: 221469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224039:-1
position: 224039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221469-224039:-1:exon

VCA1004_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013571033.1
GO function: GO:0008658 - penicillin binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PBP1A family penicillin-binding protein
translation: MKFIKPLLIFSFVCMILGVTTIFGFYYYLKPQLPDVATLKNVQLQTPMQVFSQDGKLIAQFGEKRRIPLKLDDIPLKMQEAFIATEDSRYYQHYGIDPIGIVRAAVVVAISGSAKQGASTITQQLARNFFLSNDKKIMRKIKEIFIALHIEQVLNKQEILELYLNKIYLGYRSYGVGAASLTYFGKEPKDLTLGEMAIIAGLPKAPSTMNPIYSIDRAKTRRHVVLLRMLEEKYITQQEFDAADAEPIDGKYHGAHIEVNAPYVAELARGWAVKRYGEEAYSSGIQIYTSVKSDLQEAANEAAIGNLLNYDERHGYRGPEAIAWKPTDKAFTQEQMDKYLKNKPTFGLIHPALVTSIAQRSATVYIKNRGEQTIEWDGLKWARKYYNDKRQGPAPSKASDMLEVGQQIWVRPMGVLQEKPAVEETENTLMKQDVDEDEQGIDPLDKVSWQLSQVPIVNTAFVALNPEDGAVLSLVGGFNFVHSKFDRATMAERQVGSSIKPFIYSAAIDKGLTLATLINDAPINQWDQGQGTAWRPKNSPPVYLGPTMLRRGLAQSKNVMAVRTLRRVGLDNVLDYLPRFGFDPEKLPHSETIALGAGSLTPMQMAQGISVFANGGYYVEPYYIDHVNDPYGNLLYRSNPTTVCDTQCSQQPIVVDDKGTEEMPKHAEKVISEQTAFLVREMMYSNIWGGGVWSKGTGWNGTGWRGQVLKRRDIGGKTGTTNDSVDTWFNGYAPGIVATTWVGFDQANRPLGYTAANANFTRKEQYNGGESGATTAQPAWVDFMKVALKNVPEQETQLPAGIIRVRIDRDSGLLTRKNDDSSMWEYFKAGTEPTEYISDDKGTDLYTEDEDGDSLF
SIO_010081: VCA1004_RS01030
subclass of: SO_0000673
so part of: VCA1004_RS01030
location: complement(221469..224039)
location: region:221469-224039:-1
so has part: feature:221469-224039:-1:exon

WP_086982010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221469-224039:-1:exon

VCA1004_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pilM
locus tag: VCA1004_RS01035
so part of: sequence
location: 224303..225325
location: region:224303-225325:1
so has part: feature:224303-225325:1:exon
subclass of: SO_0000010

position:224303:1
position: 224303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225325:1
position: 225325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224303-225325:1:exon

VCA1004_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pilM
locus tag: VCA1004_RS01035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025387.1
GO process: GO:0009297 - pilus assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV pilus assembly protein PilM
translation: MGKSFVTGIDIGHHSIKAVVVKPVGVQFELVTYAEVPVSGAIFSDNHTVNHQEIVKNLKQLKKQLPMRAKKVVLAVPDSAVISKLLHIDSELEEREKEFALYQLFAQQSPFPIEELSLDYVKLEPERATVSSTSTYQVYATRKEVIESRVEVIKKSGFTPWVMDLQAHGLLRVWQMACQEQAEKANGLLVDIGQSQTSICILPAGRPAYYKDFPLGTQQLPSSLTTSQAVSEPSFTLSLEPPESFIAELAERLTRQLSLYASVNQQHQIDGVWLTGGGATLLGLEESLSTKLNLPVARFNPFARLQGKLTIPERMEPGTFGVAVGLALKGLQWQGGKHVA
SIO_010081: VCA1004_RS01035
subclass of: SO_0000673
so part of: VCA1004_RS01035
location: 224303..225325
location: region:224303-225325:1
so has part: feature:224303-225325:1:exon

WP_086982011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224303-225325:1:exon

VCA1004_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01040
so part of: sequence
location: 225315..225929
location: region:225315-225929:1
so has part: feature:225315-225929:1:exon
subclass of: SO_0000010

position:225315:1
position: 225315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225929:1
position: 225929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225315-225929:1:exon

VCA1004_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017085980.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PilN domain-containing protein
translation: MLHDINLLPWREEKRQQYKQRFYVMVVAGMVLAFLLQWAGSAYLDYLKNEQRQRNQQLQTYLSELDKQLLNMKEIEAKHRSILTRLRLVESLQNERNKTTDFMNLMPALVPEGVYIDKIKMSGREVEMAGMSDSTARLATMLDNFENSKWLTEVEMHSIISGKVLFGKKFQSFKLSFRFDGSATAPLTTEQITSAQVLTQGGSH
SIO_010081: VCA1004_RS01040
subclass of: SO_0000673
so part of: VCA1004_RS01040
location: 225315..225929
location: region:225315-225929:1
so has part: feature:225315-225929:1:exon

WP_086982012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225315-225929:1:exon

VCA1004_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pilO
locus tag: VCA1004_RS01045
so part of: sequence
location: 225929..226513
location: region:225929-226513:1
so has part: feature:225929-226513:1:exon
subclass of: SO_0000010

position:226513:1
position: 226513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225929-226513:1:exon

VCA1004_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pilO
locus tag: VCA1004_RS01045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025389.1
GO process: GO:0043683 - type IV pilus assembly [Evidence IEA]; GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 4a pilus biogenesis protein PilO
translation: MVDFRELDLDDMPEWPLLPQLLAIGGLIIVLQIVGTWFYLSPQHDELNQIRQQEVTLKSSIRIKAAKVAALPQLQAQLDELNTRYQYLLKQLPVQKELASMLSSVNDMGLKNDLTFTRVDWGEKQVQEFLYRLPLNIELTGAYNNIGQFSEAIAKLPRIISLHNVEWQRVSQESSTLHFRVRAYTYQFKSQEVQ
SIO_010081: VCA1004_RS01045
subclass of: SO_0000673
so part of: VCA1004_RS01045
location: 225929..226513
location: region:225929-226513:1
so has part: feature:225929-226513:1:exon

WP_086982013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225929-226513:1:exon

VCA1004_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01050
so part of: sequence
location: 226513..227034
location: region:226513-227034:1
so has part: feature:226513-227034:1:exon
subclass of: SO_0000010

position:227034:1
position: 227034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226513-227034:1:exon

VCA1004_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017036112.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilus assembly protein PilP
translation: MKYHFGWHSAAWAMIVMLTGCQTSENDIDSFIAQVENQSRKEIAQLEPEKTFQASQFNAHELRGPFMLPAIAVANQPKIKQDCWQPRLRTKTGALELYPLEQLSLRGVMASKGDISGLVQTPKGTLVSVTAGEYLGLNNGKVTKVTPQFILIKETLPDGLGCWQQRSVKLALK
SIO_010081: VCA1004_RS01050
subclass of: SO_0000673
so part of: VCA1004_RS01050
location: 226513..227034
location: region:226513-227034:1
so has part: feature:226513-227034:1:exon

WP_086982014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226513-227034:1:exon

VCA1004_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01055
so part of: sequence
location: 227076..228896
location: region:227076-228896:1
so has part: feature:227076-228896:1:exon
subclass of: SO_0000010

position:227076:1
position: 227076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228896:1
position: 228896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227076-228896:1:exon

VCA1004_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV pilus secretin PilQ family protein
translation: MHKGLTLTGLTHHTGLISAIACLFMFGPIAMAAPTTTSTVSTTQTSVQPAFSNQFVGLDFRINKQKEGVIVVKLSSSTSAVDIKKNAQGLTIDLIHTRVSDDDLYVIDVKDFSTAVSTVEVFREGENTRLQAVVSGDFSYDYRLKGNNLEITVTERKATKSAAQSKTVLEGENKKISINFQDIPVRNVLQLIAEYNGFNLVVSDSVTGNLTLRLDGVPWQQVLDIILQVKGLDKQIEGNVVLVAPQAELDAQQKQRLEQARMEEELGNLSSELVQINFAKASDIAALIGGEGEVSMLSSRGNINVDERTNSLLIRDLTTNIEVIKGIIEALDIPVKQVQIEARIVTVSEGNLQDLGVRWGVSNTNGSFSTGGSIESNLANANRHGQNGRGGLMDGDDLDFAGGDQKVGIDDFLNVNLAATSSNASSIAFQVAKLGSDTLLDLELSALQAESKAEIISSPRLITTNKQPAYIEQGTEIPYLEASSSGATSVSFKKAVLSLKVTPQITPDNRLVLDLSVTQDRPGEVVKTGDGEAVAIDTQRIGTQVLVDNGETVVLGGIYQHSVQTSVDKVPLLGDIPYLGALFRRSYENYGKSELLIFVTPKVILQ
SIO_010081: VCA1004_RS01055
subclass of: SO_0000673
so part of: VCA1004_RS01055
location: 227076..228896
location: region:227076-228896:1
so has part: feature:227076-228896:1:exon

WP_086982015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227076-228896:1:exon

VCA1004_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: aroK
locus tag: VCA1004_RS01060
so part of: sequence
location: 229139..229657
location: region:229139-229657:1
so has part: feature:229139-229657:1:exon
subclass of: SO_0000010

position:229139:1
position: 229139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229657:1
position: 229657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229139-229657:1:exon

VCA1004_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: aroK
locus tag: VCA1004_RS01060
EC number: 2.7.1.71
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011079357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate kinase AroK
translation: MAEKRNIFLVGPMGAGKSTIGRHLAQQLHMEFLDSDTVIEQRTGADISWVFDVEGEEGFRVREEAVIDDLTQEQGIVLATGGGSIKSKDNRNRLSARGIVVYLETTIEKQLTRTNRDKKRPLLQTGEPREVLEALAAERNPLYEEIADYTVRTDDQSAKVVANLIVKMLDEN
SIO_010081: VCA1004_RS01060
subclass of: SO_0000673
so part of: VCA1004_RS01060
location: 229139..229657
location: region:229139-229657:1
so has part: feature:229139-229657:1:exon

WP_086982016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229139-229657:1:exon

VCA1004_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: aroB
locus tag: VCA1004_RS01065
so part of: sequence
location: 229682..230764
location: region:229682-230764:1
so has part: feature:229682-230764:1:exon
subclass of: SO_0000010

position:229682:1
position: 229682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230764:1
position: 230764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229682-230764:1:exon

VCA1004_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: aroB
locus tag: VCA1004_RS01065
EC number: 4.2.3.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004728570.1
GO function: GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-dehydroquinate synthase
translation: MERINVDLAERSYPISIGAGLLSDPALFSSLKPQQKVVVISNTTVAPLYAPRLMATLQSLECQVDLLTLPDGEQYKSLETFNTIMTFLLEGSYNRDVVLVALGGGVIGDLVGFAAACYHRGVDFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPKSVVIDTDCLNTLPEREFAAGMAEVIKYGIIIDSDFFAWLEQHVDKLVALDNPALCYAIARCCQIKADVVNADEKESGVRALLNLGHTYGHAIEAEMGYGNWLHGEAVASGTMMAAQTSVLRSLMTPQQLERIKTLLVKFNLPIHTPESMSYEHFIKHMMRDKKVLAGQLRLILPTGIGSAEVLGDTDEAIIRQAIEACR
SIO_010081: VCA1004_RS01065
subclass of: SO_0000673
so part of: VCA1004_RS01065
location: 229682..230764
location: region:229682-230764:1
so has part: feature:229682-230764:1:exon

WP_086982017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229682-230764:1:exon

VCA1004_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01070
so part of: sequence
location: 230901..232313
location: region:230901-232313:1
so has part: feature:230901-232313:1:exon
subclass of: SO_0000010

position:230901:1
position: 230901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232313:1
position: 232313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230901-232313:1:exon

VCA1004_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01070
inference: COORDINATES: protein motif:HMM:NF024793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSMTHDGAPIVQLESQQQLLDNLQQMIRLDSNLICVAGKKGAGKSWLAQRFLNTDSAIQTLSFLICLPSQTAEQQRSVLLGQLLSDSFCTGEETLTESLGTFRGEQECKATIVVDDANLLTHHLLDELAQLVLEAQNQPLWQINVILFANPDLIDEASLTTLPKPDFKHLVIEPFRPQEVNDFLEQLVIPAHHVDSEKKQQAIYQAAQKVEAYPGNLYALAEKHRPPVVCWVKRSLIAIIILLLALGGWSWWTSYQARVQDQMLDAGSQKDEQQVAPTDESATTDASSSAQSTLSSQSESTQQDDALPPSVTEKTLTVGDETNGEQKRVVVPANVVDALLNGESPKSAKVSQEDVQNLPATNYSSIADGNLTLASEALLAIPEQRYTLQLAAVTEEEEAINFLKMYDLDGKVRIYRTLRGQQPWYIITYKDFASIQETREAIQELSLALQKEQPWPKSMAQVHQEIEKAK
SIO_010081: VCA1004_RS01070
subclass of: SO_0000673
so part of: VCA1004_RS01070
location: 230901..232313
location: region:230901-232313:1
so has part: feature:230901-232313:1:exon

WP_086982018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230901-232313:1:exon

VCA1004_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: dam
locus tag: VCA1004_RS01075
so part of: sequence
location: 232410..233231
location: region:232410-233231:1
so has part: feature:232410-233231:1:exon
subclass of: SO_0000010

position:232410:1
position: 232410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233231:1
position: 233231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232410-233231:1:exon

VCA1004_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: dam
locus tag: VCA1004_RS01075
EC number: 2.1.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025395.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenine-specific DNA-methyltransferase
translation: MKKQRAFLKWAGGKYGLVEDIQRHLPEGRKLIEPFVGAGSVFLNTDYDQYLLADINPDLINLYNLLKEQPDNFIQEAQRFFTSEYNRKEVYLGIRADFNQSQDTFFRSLAFLYMNRFGFNGLCRYNKKGGFNVPFGSYKKPYFPEKEMLHFAEKAKKASFVCESYPQTFARARKGCVVYCDPPYAPLAQASNFTSYAGNGFSLDDQAELASIAEHTAMQREIPVLISNHDTALTRRLYKGAQLNVVKVKRTISRNGSGRNKVDELLALFEAKG
SIO_010081: VCA1004_RS01075
subclass of: SO_0000673
so part of: VCA1004_RS01075
location: 232410..233231
location: region:232410-233231:1
so has part: feature:232410-233231:1:exon

WP_086982019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232410-233231:1:exon

VCA1004_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpe
locus tag: VCA1004_RS01085
so part of: sequence
location: 233659..234333
location: region:233659-234333:1
so has part: feature:233659-234333:1:exon
subclass of: SO_0000010

position:233659:1
position: 233659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234333:1
position: 234333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233659-234333:1:exon

VCA1004_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpe
locus tag: VCA1004_RS01085
EC number: 5.1.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017009603.1
GO function: GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribulose-phosphate 3-epimerase
translation: MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPIDVHLMVKPVDSIVPEFAKAGASMITFHIEATEHVDRTLQLIKEHGCQAGVVFNPATPLHHLDYIMDKVDMILLMSVNPGFGGQSFIPSTLDKLREVRKRIDESGRNIRLEIDGGVKVDNIREIAEAGADMFVAGSAIFNQPDYKEVIDQMRNELAQVKE
SIO_010081: VCA1004_RS01085
subclass of: SO_0000673
so part of: VCA1004_RS01085
location: 233659..234333
location: region:233659-234333:1
so has part: feature:233659-234333:1:exon

WP_086982020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233659-234333:1:exon

VCA1004_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01090
so part of: sequence
location: 234461..235147
location: region:234461-235147:1
so has part: feature:234461-235147:1:exon
subclass of: SO_0000010

position:234461:1
position: 234461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235147:1
position: 235147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234461-235147:1:exon

VCA1004_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01090
EC number: 3.1.3.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017036105.1
GO function: GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglycolate phosphatase
translation: MALQDIQLIAFDLDGTLLDSVPDLAEAADLAVRSLDFPSVTQAQVRDWVGNGADILIARALSQDILIDENLDAELVKQARVRFDEFYHQGGHRLSHLYDKVKSTLQTLHGAGYKMAIVTNKPSAFVPDILAQHGIADVFVDVIGGDDFPNKKPDPMALNWLLEKHQVSAKQMLMVGDSKNDVLAAKNAGCHSFALTYGYNHGEPIADSAPDFVADNLAELLDVLAVVN
SIO_010081: VCA1004_RS01090
subclass of: SO_0000673
so part of: VCA1004_RS01090
location: 234461..235147
location: region:234461-235147:1
so has part: feature:234461-235147:1:exon

WP_086982021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234461-235147:1:exon

VCA1004_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: trpS
locus tag: VCA1004_RS01095
so part of: sequence
location: 235310..236326
location: region:235310-236326:1
so has part: feature:235310-236326:1:exon
subclass of: SO_0000010

position:235310:1
position: 235310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236326:1
position: 236326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235310-236326:1:exon

VCA1004_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: trpS
locus tag: VCA1004_RS01095
EC number: 6.1.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025399.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MSKPIVLSGVQPSGELSIGNYLGALRQWQQMQDDYDCQYCVVDLHAITVRQDPKALHEATLDALAVCLAVGVDPKKSTLFVQSHVPEHAQLGWLLNCYTQMGELNRMTQFKDKSQRYANDVNAGLFAYPVLMAADILLYGAHQVPVGNDQKQHLELARDIANRFNNVYSPDEPIFQIPEPYIPQVNARVMSLQDATKKMSKSDDNRKNVITILEDPKSILKKINKAQTDTETPPRIAHDVENKAGISNLMGLYSAATGKSYAEIEAQYAGVEMYGPFKKDVGEAVVAMLEPIQAEYHRIRADRAYMDEVMKVGAEKASAKAAVTLAKAFQAVGFVPRA
SIO_010081: VCA1004_RS01095
subclass of: SO_0000673
so part of: VCA1004_RS01095
location: 235310..236326
location: region:235310-236326:1
so has part: feature:235310-236326:1:exon

WP_086982022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235310-236326:1:exon

VCA1004_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01100
so part of: sequence
location: 236427..237008
location: region:236427-237008:1
so has part: feature:236427-237008:1:exon
subclass of: SO_0000010

position:236427:1
position: 236427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237008:1
position: 237008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236427-237008:1:exon

VCA1004_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008222313.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminodeoxychorismate/anthranilate synthase component II
translation: MLLIIDNYDSFTYNLYQYFCELGQQVRVIRNDEIDIAGIEALNPTHLVISPGPCTPNEAGISLQAIEHFAGQLPILGVCLGHQAIAQVFGGQVVRARQVMHGKTSAIVHNGTSVFTGLPNPLTVTRYHSLVVQTESLPDCFELTAWSTLESGEMDEIMGYRHKSLPIEAVQFHPESIKTQCGHQILANFIQQS
SIO_010081: VCA1004_RS01100
subclass of: SO_0000673
so part of: VCA1004_RS01100
location: 236427..237008
location: region:236427-237008:1
so has part: feature:236427-237008:1:exon

WP_086982023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236427-237008:1:exon

VCA1004_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01105
so part of: sequence
location: 237234..238454
location: region:237234-238454:1
so has part: feature:237234-238454:1:exon
subclass of: SO_0000010

position:237234:1
position: 237234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238454:1
position: 238454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237234-238454:1:exon

VCA1004_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005458126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate aminotransferase family protein
translation: MSINTQVKRSWFDEVMVPCYSPMEMIPVRGQGSVVWDQQGKEYIDFAGGIAVSCLGHCHPIMVEALTEQAHKIWHLSNVMTNEPALRLAKKLTEISFAEKVFFANSGAEANEAALKLARRWAKEVHGEEKSEIIAFVQGFHGRTFFTVTVGGQPSYSDGFGPKPGNVTHIPYNDLAALKAHISEKTCAVMMEPLQGEGGVISPDSDFIHAVRDLCDQHNALLIFDEVQTGNGRTGHFYAYQGLGVTPDILSTAKSLGGGFPIGAMLTTSELAQHMKVGVHGSTYGGNPLACAVAEAVVNHISQPMVLQGVVEREQWLKQGLEALNQKYGIFADIRGKGLLIGAELNEEWQGRARDILVAAGQHGLLLLVAGANVVRFTPSLVITKNEVQQGLEKLDAALASLVNQS
SIO_010081: VCA1004_RS01105
subclass of: SO_0000673
so part of: VCA1004_RS01105
location: 237234..238454
location: region:237234-238454:1
so has part: feature:237234-238454:1:exon

WP_086982025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237234-238454:1:exon

VCA1004_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01110
so part of: sequence
location: 238671..239465
location: region:238671-239465:1
so has part: feature:238671-239465:1:exon
subclass of: SO_0000010

position:238671:1
position: 238671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239465:1
position: 239465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238671-239465:1:exon

VCA1004_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005524384.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1338 domain-containing protein
translation: MSVEQLFEHLWQDYTTRLCPSALKVQKLLTHQQGEPINDHIALRTFSGSKLGLEQLAKHFVELGYYQAGEYHFEAKKLYAHHYQHPEADYPKVFISELNLAACSETLRDIVNKLTHDIPSQYTDDVRFLFQGRPWRISKQDYAELSKESEYAAWVAAHGFGANHFTISVNALPGFADLEQVNDFLVWHHFELNHSGGDIKGSEAVGLQQSSTIADQVSVACSDGELCIPGGFYEFAKRFPLADGVLYQGFVEASADKIFESTNR
SIO_010081: VCA1004_RS01110
subclass of: SO_0000673
so part of: VCA1004_RS01110
location: 238671..239465
location: region:238671-239465:1
so has part: feature:238671-239465:1:exon

WP_179949576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238671-239465:1:exon

VCA1004_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: spoT
locus tag: VCA1004_RS01115
so part of: sequence
location: complement(239690..241819)
location: region:239690-241819:-1
so has part: feature:239690-241819:-1:exon
subclass of: SO_0000010

position:239690:-1
position: 239690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241819:-1
position: 241819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239690-241819:-1:exon

VCA1004_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: spoT
locus tag: VCA1004_RS01115
EC number: 2.7.6.5
EC number: 3.1.7.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005472457.1
GO function: GO:0008728 - GTP diphosphokinase activity [Evidence IEA]; GO:0008893 - guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity [Evidence IEA]
GO process: GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
translation: MYLFESLKAVAQEYLPESQLETLRQAFLVAKEAHEGQSRSSGEPYIIHPVAVARILAEMHLDNETLMAALLHDVIEDTATTKEDLAAQFGETVAELVDGVSKLDKLKFRDRKEAQAENFRKMILAMVQDIRVILIKLADRTHNMRTLDALRPDKRRRIARETLEIFSPLAHRLGINNIKTELEELGFEALYPNRYRVLKEVVKAARGNRKEMIQRIHSEIEGRLQEAGLQVRVLGREKNLYSIYNKMRTKEQRFHTIMDIYAFRVIVDTPDTCYRVLGQVHNLYKPRPGRMKDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMDQMADKGVAAHWSYKANGDSSGTTAQIKAQRWMQSLLELQQSAGNSFEFIENVKSDLFPDEIFVFTPKGRIIELPAGATAVDFAYAVHTDVGNTCVGARVDRNPYPLSKSLKNGQTIEIISAPGARPNAAWLNYVVTSRARTKIRQVLKTMRREESVALGRRLLNHALGELSLKDISAENIKHVIADLKLKSEDELLAAIGLGELMSIVIARRLLGDADELTELPSNEDDALSTNKKLPIRGAEGILLTYAKCCHPIPGDDIIAHVSPGRGLVIHRETCPNIRGYQKEPERYMAVEWSKDFEQEFITELKIDMQNRQGALADLTNVVASTGSNIHGIATEERDGRLYTVTLLLTTKDRVHLAGIMKRIRVMPHALKVRRARN
SIO_010081: VCA1004_RS01115
subclass of: SO_0000673
so part of: VCA1004_RS01115
location: complement(239690..241819)
location: region:239690-241819:-1
so has part: feature:239690-241819:-1:exon

WP_086982027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239690-241819:-1:exon

VCA1004_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpoZ
locus tag: VCA1004_RS01120
so part of: sequence
location: complement(241846..242118)
location: region:241846-242118:-1
so has part: feature:241846-242118:-1:exon
subclass of: SO_0000010

position:241846:-1
position: 241846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242118:-1
position: 242118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241846-242118:-1:exon

VCA1004_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpoZ
locus tag: VCA1004_RS01120
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379346.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit omega
translation: MARVTVQDAVEKIGNRFDLVLIAARRARQMQTGNKDALVPEENDKTTVIALREIEEGLITKEVLDARERQEQQEQDAAELAAVSSIVHHR
SIO_010081: VCA1004_RS01120
subclass of: SO_0000673
so part of: VCA1004_RS01120
location: complement(241846..242118)
location: region:241846-242118:-1
so has part: feature:241846-242118:-1:exon

WP_105902889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241846-242118:-1:exon

VCA1004_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: gmk
locus tag: VCA1004_RS01125
so part of: sequence
location: complement(242237..242860)
location: region:242237-242860:-1
so has part: feature:242237-242860:-1:exon
subclass of: SO_0000010

position:242237:-1
position: 242237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242860:-1
position: 242860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242237-242860:-1:exon

VCA1004_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: gmk
locus tag: VCA1004_RS01125
EC number: 2.7.4.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017062466.1
GO function: GO:0004385 - guanylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: guanylate kinase
translation: MGKGTLYIVSAPSGAGKSSLISAMLEKNPNYAMKVSISHTTRDQRPGEEDGVHYHFVEKEHFVELMQQGVFLEHAEVFGNYYGTSRVWIEENLNKGIDIFLDIDWQGARQIREQMPQAKGIFILPPSNGELERRLNTRGQDSAEVIAGRMSKAKAEISHYNEYDYLIINDDFDAALMDFKAIIRAERLKQDKQAVKYNGMLKALLTE
SIO_010081: VCA1004_RS01125
subclass of: SO_0000673
so part of: VCA1004_RS01125
location: complement(242237..242860)
location: region:242237-242860:-1
so has part: feature:242237-242860:-1:exon

WP_086984592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242237-242860:-1:exon

VCA1004_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fdhD
locus tag: VCA1004_RS01130
so part of: sequence
location: 243080..243925
location: region:243080-243925:1
so has part: feature:243080-243925:1:exon
subclass of: SO_0000010

position:243080:1
position: 243080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243925:1
position: 243925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243080-243925:1:exon

VCA1004_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fdhD
locus tag: VCA1004_RS01130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025407.1
GO component: GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO function: GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO process: GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: formate dehydrogenase accessory sulfurtransferase FdhD
translation: MKNSHSRLPLIPVPDSVIQAAPVTRFRSQATSAVVNEQEQFAIETPVALIYNGISHTVLMCSQTDLEDLAIGFSLSEGIIDYARDIHDIEIQTSEAGVELYIELSNRCFERLKQARRTMAGRTGCGICGSEHLSHVVRSQPPLPNQSVLDWHLIDGVLAQLKDLQALNQITGATHAAVYLSQQGEIVAIREDVGRHIALDKLVGYIAKNKCSGGAILVTSRASFEMVQKTVSAGVEILLAISAATSMAVTLAEQSNLTLVGFCRPGRADAYTYPHRLLIEP
SIO_010081: VCA1004_RS01130
subclass of: SO_0000673
so part of: VCA1004_RS01130
location: 243080..243925
location: region:243080-243925:1
so has part: feature:243080-243925:1:exon

WP_086982028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243080-243925:1:exon

VCA1004_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01135
so part of: sequence
location: complement(244261..246591)
location: region:244261-246591:-1
so has part: feature:244261-246591:-1:exon
subclass of: SO_0000010

position:244261:-1
position: 244261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246591:-1
position: 246591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244261-246591:-1:exon

VCA1004_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009600975.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FdhF/YdeP family oxidoreductase
translation: MAIKKYTHAAGGWGALISTSKHLLKSENVAKNIRNLLRTNQDKGFDCPGCAWGEDGEKGFFHFCENGAKAVNWEGTRRRVNAAFFAQHPVSWLRKQSDYFLEYQGRLNQPVRYNSQTDHYEAISWDDAFALIAKHLNQLESPNQAEFYTSGRASNEAAFLYQLFARAVGTNNFPDCSNMCHEATSVGLAQSIGIGKGTTRMEDFAKADAIFLFGQNPATNHPRMMDTLYKASRRGASIVSFNNLKERGLERFTNPQNKIEMITNGSTPISGHYFKPKLGGDMAAVRGMVKALYEFDQNEIAQGRPSIFDHEYIAAHTNGMEDYLAKVAATPWDDILEQSGLTREEIDSAATTYRQAKRVITTWAMGITQHKHSVNTIQEIVNLQLLFGQIGREGAGVCPVRGHSNVQGDRTVGINEKPSAAFNHKMEQVFNFTVPKQPGHNVVESIKSMLAGESKVFIALGGNFVSATPDTRLTQQALESCHLTVSIATKLNRTHLSPGKDSLILPCLGRTDIDLQKQGQQCVTVEDSFSMVHASYGAVANDKEHNDQGEMRSEPAIIAGMAQATLGSHPVAWLDLVDDYDRIRSLIEQVIPGFAGVNEKIKQPGGFYLGNSARENNWQTPSGKAEIITHDLPEHLLPAKLRAMSDQAVFVLQTMRSHDQYNTTIYGFDDRYRGVFGERKVLFMNAQDIEKIGLKAGERVDIRSLYADQYEREVFGFKLVAYDIPVGNIAAYFPEANPLVALHDSGDLSHTPVSKAIAVTVKKSAETDENIHVVSY
SIO_010081: VCA1004_RS01135
subclass of: SO_0000673
so part of: VCA1004_RS01135
location: complement(244261..246591)
location: region:244261-246591:-1
so has part: feature:244261-246591:-1:exon

WP_086982029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244261-246591:-1:exon

VCA1004_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01140
so part of: sequence
location: complement(246804..248159)
location: region:246804-248159:-1
so has part: feature:246804-248159:-1:exon
subclass of: SO_0000010

position:246804:-1
position: 246804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248159:-1
position: 248159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246804-248159:-1:exon

VCA1004_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006072462.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter NhaC family protein
translation: MSAIPPSNSTPASNITPSALALLPLGVFLALFIGVGAYLTLQGVDFAFYQLPAPIAALPAIVLAIALSKDKINQAIEQFLKGVGHQDIIAMCMIYLLAGAFAAVAKASGGVDATVNLGLSLLPTTMILPGIFLISAFIATAMGTSMGTIAAVAPVAVGIAHSAGMSLPLTAGVVLSGAMFGDNLSIISDTTIAATRSQGCEMKDKFRENIKIALPAALIALVIFALSSTATQTPATSEIEWLKILPYITILVLAVSGLNVFVVLSLGIIFAGAVSLFAVPDYALTQLGKDIYAGFGNMQEIFILSMLIGGLSELMRRQGGLAFLTQFVSRIIQKFGTQHSHDANSKASEFGIAILVSLTNFCTANNTVAIIVSGSVARELSQQNDVSPRRSASVLDIFSCVTQGILPYGAQILLLGSIFQLSPLEIVSNSYYCFVLAACAMLAMLLKPHRL
SIO_010081: VCA1004_RS01140
subclass of: SO_0000673
so part of: VCA1004_RS01140
location: complement(246804..248159)
location: region:246804-248159:-1
so has part: feature:246804-248159:-1:exon

WP_086982030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246804-248159:-1:exon

VCA1004_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ulaG
locus tag: VCA1004_RS01145
so part of: sequence
location: complement(248452..249519)
location: region:248452-249519:-1
so has part: feature:248452-249519:-1:exon
subclass of: SO_0000010

position:248452:-1
position: 248452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249519:-1
position: 249519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248452-249519:-1:exon

VCA1004_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ulaG
locus tag: VCA1004_RS01145
EC number: 3.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017686547.1
GO function: GO:0035460 - L-ascorbate 6-phosphate lactonase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO process: GO:0019854 - L-ascorbic acid catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-ascorbate 6-phosphate lactonase
translation: MKNISEITRESWILNTFPEWGTWLNEEIEQAVVAPNTFSMWWLGCTGIWLKSEGGANLSMDFWCGTGKKTQAIQKMKNQHQMMRMGGVEALQPNLRTSIFPLDPFAIKKIDAVMASHDHGDHIDINVAAAVLKNCDEHVKFIGPKACVDLWIKWGVPEDRCIIAKVGDEIQIKDVNIKVLDAFDRTALVTLPEGTSSLDKDILDGMDDRAVNYLVETTGGSIYHSGDSHYSNYYAKHGNDHKIDVALLSYGENPRGVTDKMTSSDILRAAESLNCEIVVPFHHDIWANFQNDPREIEVLWNMKKERLQYNFAPFFWQVGGKYTYPTDKNRMHYQHFRGFADIFKNDPELPYRAFL
SIO_010081: VCA1004_RS01145
subclass of: SO_0000673
so part of: VCA1004_RS01145
location: complement(248452..249519)
location: region:248452-249519:-1
so has part: feature:248452-249519:-1:exon

WP_086982031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248452-249519:-1:exon

VCA1004_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ulaR
locus tag: VCA1004_RS01150
so part of: sequence
location: complement(249640..250395)
location: region:249640-250395:-1
so has part: feature:249640-250395:-1:exon
subclass of: SO_0000010

position:249640:-1
position: 249640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250395:-1
position: 250395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249640-250395:-1:exon

VCA1004_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ulaR
locus tag: VCA1004_RS01150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001006788.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional regulator UlaR
translation: MNEMQRHNGILSLLEEMQTINVSHIIDNFSVSPATARRDIAKLDELGRLRKVRNGAERIENQKRKWSPLNINSTEFYEEKSLIAHAAAELCQAGDTVVINCGSTAFLLGQQLCGEDVQIVTNYFPLASYLINEDHDDVIIIGGQYNKAQNIFLNPAPNSLSGYAGNWMFTSGKGLTDAGLYKADMLTAVAEQQMLEQVDKLVVVVDSSKVGQRTGMLFCNAKQIDIVITGKDANPNVIKKIEAQGVQVILV
SIO_010081: VCA1004_RS01150
subclass of: SO_0000673
so part of: VCA1004_RS01150
location: complement(249640..250395)
location: region:249640-250395:-1
so has part: feature:249640-250395:-1:exon

WP_086982032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249640-250395:-1:exon

VCA1004_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01155
so part of: sequence
location: 250736..252553
location: region:250736-252553:1
so has part: feature:250736-252553:1:exon
subclass of: SO_0000010

position:250736:1
position: 250736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252553:1
position: 252553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250736-252553:1:exon

VCA1004_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017092748.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS ascorbate-specific subunit IIBC
translation: MEFLYDIFYIFYSQVMTKAPLLLGIVTCLGYILLKRDATTVIAGSIKTIVGFMIVQVGAGTLVAGFKPVIEKMSEIHGLTGSVIDPYTSMMATMETMGDNYSWVGYAVLMALGINILLVAFRRITGIRTIMLTGHIMFQQAGLIAVFYFVLGAGMWETIIYSAILMALYWGISSNIMFKPTQEVTGGAGFSIGHQQQFASWVATKVAPKLGDKNDSVDHINLPKWLHIFHDSIAATTLVMTAFFGIILLSFGLDNLQEMAGSTHWLIYIFETGLKFAVAIQVIVTGVRMFVAELSEAFNGISQRLIPNAVLAIDCAAIYAYSPNAMVFGFLWGAVGQFTAVLAMLAFDAPIMIIPGFIPMFFSNATIGVFANHFGGWKAVMKICFVMGIIEVVGSAWAIHIFAQSGTEFNGWMGMADWALVFPPIMQGISSSSMFFFVVVALSGVYMYFASKALRAEEDGEAQPAQTMTAVTSEGVEVEVEAPNSQAPVKSQAVTEAPQASNATEQKPVRVLVCCGSGQGSSMMCSKKIKEFLDKKGVPATTFNSAITDYKSHLGSFDIIVTSVALAEKITNLPEGKQQLAVKNMIMVKTFGDELISLIENNFHK
SIO_010081: VCA1004_RS01155
subclass of: SO_0000673
so part of: VCA1004_RS01155
location: 250736..252553
location: region:250736-252553:1
so has part: feature:250736-252553:1:exon

WP_086982033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250736-252553:1:exon

VCA1004_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01160
so part of: sequence
location: 252626..253093
location: region:252626-253093:1
so has part: feature:252626-253093:1:exon
subclass of: SO_0000010

position:252626:1
position: 252626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253093:1
position: 253093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252626-253093:1:exon

VCA1004_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009845900.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIA
translation: MNLKESLITNNSIQLNAKATDWQSAIKIGTDALVKAGVAEERYYDAIIKAISAEGPYICIHDAFALPHCRPEDGVIKTGFALTLLETPIQFDDVDEPVDVLITLAGKDSEEHIEGTMQVANLIEFDEDFSKLRACKTPQDVVNLIDMALAQAEAA
SIO_010081: VCA1004_RS01160
subclass of: SO_0000673
so part of: VCA1004_RS01160
location: 252626..253093
location: region:252626-253093:1
so has part: feature:252626-253093:1:exon

WP_086982034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252626-253093:1:exon

VCA1004_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01165
so part of: sequence
location: 253103..253807
location: region:253103-253807:1
so has part: feature:253103-253807:1:exon
subclass of: SO_0000010

position:253103:1
position: 253103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253807:1
position: 253807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253103-253807:1:exon

VCA1004_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019827024.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-ribulose-5-phosphate 4-epimerase
translation: MSKYSQLKQRVLEANLQLPKYGLVTFTWGNVSEFDRENDVIAIKPSGVEYSDMTAEDMVVLDLEGNIIEGKLNPSSDTATHLELYKAFPDIGGIVHTHSRSATIWAQAGIDIPALGTTHADYFYGDIPCTRKLSNTEIADQYEKNTGLVIIEEFIQRHIDPMAVPSVIVAGHAPFSWGKDAKDAVHNAVVLEEVSAMALATRSLNSWIKIQPELSDKHYLRKHGENAYYGQQKA
SIO_010081: VCA1004_RS01165
subclass of: SO_0000673
so part of: VCA1004_RS01165
location: 253103..253807
location: region:253103-253807:1
so has part: feature:253103-253807:1:exon

WP_086982035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253103-253807:1:exon

VCA1004_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01170
so part of: sequence
location: 253822..254643
location: region:253822-254643:1
so has part: feature:253822-254643:1:exon
subclass of: SO_0000010

position:253822:1
position: 253822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254643:1
position: 254643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253822-254643:1:exon

VCA1004_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005525555.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Cof-type HAD-IIB family hydrolase
translation: MYQVLALDLDGTVLTDDHTIHPEVKKAIQEAKQHCHVMIVTGRHHTAARPYYYELGLDTPIICCNGAYMYDYQTETVLTQNAINHKHAQMFIELAEEYKLKMVMYITDAMTYSNYNPFAYMLALEEWAEQAPEHHKPNIYRVDSFSETAKNTEFVWKFVVEGEQESVERLMQTPWVKEHFNGERSWSNRIDFAAMGNSKGLRLAKYVNELGFQPSQVIAIGDNHNDISMLQYAGLGVAMFNADDTVKSNAQAVCKTDNNQDGLAHLIREQIKG
SIO_010081: VCA1004_RS01170
subclass of: SO_0000673
so part of: VCA1004_RS01170
location: 253822..254643
location: region:253822-254643:1
so has part: feature:253822-254643:1:exon

WP_086982036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253822-254643:1:exon

VCA1004_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01175
so part of: sequence
location: 254648..255295
location: region:254648-255295:1
so has part: feature:254648-255295:1:exon
subclass of: SO_0000010

position:254648:1
position: 254648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255295:1
position: 255295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254648-255295:1:exon

VCA1004_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01175
EC number: 4.1.1.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020195066.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-keto-L-gulonate-6-phosphate decarboxylase UlaD
translation: MTKPMIQIALDQTNLPAAIEVANNVESYVDVIEVGTILAFAEGMKAVSTLRKNHPDHILVCDMKTTDGGAILARMAFEAGADWITVSAAAHIATIDACKKVADEFNGEIQIEIYGNWTMEDAQAWVDLGITQAIYHRSRDAELAGVGWTEADLVKMRALSELGIELSITGGIVPEDLYLFEGIKAKTFIAGRALAGEKGQETAEALKEQISRYWS
SIO_010081: VCA1004_RS01175
subclass of: SO_0000673
so part of: VCA1004_RS01175
location: 254648..255295
location: region:254648-255295:1
so has part: feature:254648-255295:1:exon

WP_086982037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254648-255295:1:exon

VCA1004_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01180
so part of: sequence
location: 255304..256185
location: region:255304-256185:1
so has part: feature:255304-256185:1:exon
subclass of: SO_0000010

position:255304:1
position: 255304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256185:1
position: 256185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255304-256185:1:exon

VCA1004_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007463494.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-ribulose-5-phosphate 3-epimerase
translation: MYQNLTRHRVGLYEKALPNDLSWEDKLKTTKELGFDFLEISIDESDERRSRLDWYDEEVYGLRRLCEKHQVPLQSMCLSAHRKFPFGSADPKVREQAVIHMEKAITLAYKLGIRTIQLAGYDVYYELADKATHLRFIEGMKLSAQLAERAGVMLAVEIMDTDYLNSLSKFEVLSREIDSPYFTAYPDVGNISGWNYDIVTELKLSKPHITQIHLKDTYRVTPEYKGQFRDLVIGEGEVDFNAIFKTLKETECVVPLVIEMWAQDEHWKDNILKAQVRLNEVCSQTGVMPLFGS
SIO_010081: VCA1004_RS01180
subclass of: SO_0000673
so part of: VCA1004_RS01180
location: 255304..256185
location: region:255304-256185:1
so has part: feature:255304-256185:1:exon

WP_086982038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255304-256185:1:exon

VCA1004_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01185
so part of: sequence
location: complement(256372..256581)
location: region:256372-256581:-1
so has part: feature:256372-256581:-1:exon
subclass of: SO_0000010

position:256372:-1
position: 256372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256581:-1
position: 256581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256372-256581:-1:exon

VCA1004_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017072601.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYSTDAIELVKLGVNIEIAKNSSLHPTDALEIVNIASEIGTHVTVKKKYHTEVLMEMAKVGRDHVTIAI
SIO_010081: VCA1004_RS01185
subclass of: SO_0000673
so part of: VCA1004_RS01185
location: complement(256372..256581)
location: region:256372-256581:-1
so has part: feature:256372-256581:-1:exon

WP_086982039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256372-256581:-1:exon

VCA1004_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01190
so part of: sequence
location: complement(257031..257897)
location: region:257031-257897:-1
so has part: feature:257031-257897:-1:exon
subclass of: SO_0000010

position:257031:-1
position: 257031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257897:-1
position: 257897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257031-257897:-1:exon

VCA1004_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000640570.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YicC family protein
translation: MIYSMTAYARKEIKSDWGNAVWEIRSVNQRYLETYFRLPEQFRGLEPILRERFRKRLARGKVECHLRFEANSKAQSDLNINEDLAKQVIKAANQVMSLTGEESRINPFQVMNWPGVMEAPEQDMDTIQKELLEAFEEAMSDFIDARGREGANMKALIDQRLEAITAEAAKVRARMPEILQWQRDRLLNKFEEAKIELDSSRVEQELILLAQKSDVAEELDRLDSHVKEATNIMKKGGACGRKLDFMMQEFNREANTLASKSISTDVTASGVELKVLIEQMREQIQNIE
SIO_010081: VCA1004_RS01190
subclass of: SO_0000673
so part of: VCA1004_RS01190
location: complement(257031..257897)
location: region:257031-257897:-1
so has part: feature:257031-257897:-1:exon

WP_086982040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257031-257897:-1:exon

VCA1004_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rph
locus tag: VCA1004_RS01195
so part of: sequence
location: 258085..258801
location: region:258085-258801:1
so has part: feature:258085-258801:1:exon
subclass of: SO_0000010

position:258085:1
position: 258085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258801:1
position: 258801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258085-258801:1:exon

VCA1004_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rph
locus tag: VCA1004_RS01195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005535312.1
GO function: GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease PH
translation: MRPNDRAADQVRPIKMTRNYTAYAEGSVLVEFGNTKVLCNASVEEKVPGWLKGRGKGWVTAEYGMLPRATHTRNRREAASGKQGGRTMEIQRLIARSLRAVVDLDVLGEMMITVDCDVIQADGGTRTASISGASVALADAIQSLVDLGKLKKNPMKCHVAAVSVGIIGEHALCDLEYVEDSAADTDMNVVMTEEGKMIEVQGTAEGEAFSRAELNQLLDLAEKGIQDIIAVQKAALAN
SIO_010081: VCA1004_RS01195
subclass of: SO_0000673
so part of: VCA1004_RS01195
location: 258085..258801
location: region:258085-258801:1
so has part: feature:258085-258801:1:exon

WP_086984593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258085-258801:1:exon

VCA1004_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pyrE
locus tag: VCA1004_RS01200
so part of: sequence
location: 258940..259581
location: region:258940-259581:1
so has part: feature:258940-259581:1:exon
subclass of: SO_0000010

position:258940:1
position: 258940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259581:1
position: 259581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258940-259581:1:exon

VCA1004_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pyrE
locus tag: VCA1004_RS01200
EC number: 2.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005458955.1
GO function: GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: orotate phosphoribosyltransferase
translation: MKAYQREFIEFALEKEVLKFGEFTLKSGRISPYFFNAGLFNTGRDLARLGRFYAAALADSGIEFDVLFGPAYKGIPIATTTAVALADHHDIDTPYCFNRKEAKDHGEGGNLVGNPLEGRIMLVDDVITAGTAIRESMEIIKANAADLAGVLVAIDRQEKGKGELSAIQEVERDFGCAVISIISLGDLVTYLEEQGNSAEQLASVKAYRDQYGI
SIO_010081: VCA1004_RS01200
subclass of: SO_0000673
so part of: VCA1004_RS01200
location: 258940..259581
location: region:258940-259581:1
so has part: feature:258940-259581:1:exon

WP_086982041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258940-259581:1:exon

VCA1004_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01205
so part of: sequence
location: 259803..261008
location: region:259803-261008:1
so has part: feature:259803-261008:1:exon
subclass of: SO_0000010

position:259803:1
position: 259803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261008:1
position: 261008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259803-261008:1:exon

VCA1004_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002031484.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015173 - aromatic amino acid transmembrane transporter activity [Evidence IEA]
GO process: GO:0015801 - aromatic amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aromatic amino acid transporter
translation: MSNSKVFGSTLIIAGTTIGAGMLALPIASAGLGFSTSLMIMVGMWALMAYTALLMLELHQHADYDATLHTLAKQFLGEKGKWIATFAMLFLFYALCAAYIAGGGGQFNAKLYNWFSLDVSSGLGTVIFTLLIASIVTFGTHSVDRVNRVLFTCKLIAMATMLFFLTPNIEAVNLVNMPLEKGLVVAALPVIFTSFGFHGSIPAVVRYLELDMKALKKVMLCGSLLPLIVYILWQFATLGVVNQATLSQASDVSSLVNILSQVIHNSMISQIVSVFADLALITSFLGVSLGLFEFLGDSLNKRQTKKGRVAIAFVTFLPPLGFALFYPQGFIMALGYAAIALAILAILLPVAMVVKSRQQHHETQAFTVSGGKPALIFTLLMGVVIIGVQLLISAGVLPAIG
SIO_010081: VCA1004_RS01205
subclass of: SO_0000673
so part of: VCA1004_RS01205
location: 259803..261008
location: region:259803-261008:1
so has part: feature:259803-261008:1:exon

WP_086982042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259803-261008:1:exon

VCA1004_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: crp
locus tag: VCA1004_RS01215
so part of: sequence
location: complement(261412..262044)
location: region:261412-262044:-1
so has part: feature:261412-262044:-1:exon
subclass of: SO_0000010

position:261412:-1
position: 261412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262044:-1
position: 262044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261412-262044:-1:exon

VCA1004_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: crp
locus tag: VCA1004_RS01215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cAMP-activated global transcriptional regulator CRP
translation: MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEDQERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSGQMAKRLQITSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
SIO_010081: VCA1004_RS01215
subclass of: SO_0000673
so part of: VCA1004_RS01215
location: complement(261412..262044)
location: region:261412-262044:-1
so has part: feature:261412-262044:-1:exon

WP_086982043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261412-262044:-1:exon

VCA1004_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01220
so part of: sequence
location: complement(262286..263155)
location: region:262286-263155:-1
so has part: feature:262286-263155:-1:exon
subclass of: SO_0000010

position:262286:-1
position: 262286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263155:-1
position: 263155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262286-263155:-1:exon

VCA1004_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01220
EC number: 2.7.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005417185.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008974 - phosphoribulokinase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribulokinase
translation: MSAKHPIIAVTGSSGAGTTTTSETFRKMFNMMGIQASWVEGDSFHRYTRPEMDIAIRKAKEQGKHISYFGPEANDFPALAHFFKQYGQDGTGKVRRYLHSFDEAVPYNQMPGTFTPWQDLPENTDVLFYEGLHGGVVDGEVSVSKHVDFLIGMVPIVNLEWIQKFVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRLRGIKNVDFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIIQPLLHQLIETGKID
SIO_010081: VCA1004_RS01220
subclass of: SO_0000673
so part of: VCA1004_RS01220
location: complement(262286..263155)
location: region:262286-263155:-1
so has part: feature:262286-263155:-1:exon

WP_086982044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262286-263155:-1:exon

VCA1004_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01225
so part of: sequence
location: complement(263236..263451)
location: region:263236-263451:-1
so has part: feature:263236-263451:-1:exon
subclass of: SO_0000010

position:263236:-1
position: 263236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263451:-1
position: 263451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263236-263451:-1:exon

VCA1004_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025418.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YheU family protein
translation: MIIPWQEIQPETLDNLIKEFILREGTDYGLQETTLETKIKQVKTQLQAGSVVIVFSELHESVDIKSIRDLN
SIO_010081: VCA1004_RS01225
subclass of: SO_0000673
so part of: VCA1004_RS01225
location: complement(263236..263451)
location: region:263236-263451:-1
so has part: feature:263236-263451:-1:exon

WP_086982045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263236-263451:-1:exon

VCA1004_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01230
so part of: sequence
location: complement(263478..263939)
location: region:263478-263939:-1
so has part: feature:263478-263939:-1:exon
subclass of: SO_0000010

position:263478:-1
position: 263478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263939:-1
position: 263939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263478-263939:-1:exon

VCA1004_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025419.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR02444 family protein
translation: MTQYQPLPLTFERLWQFSLQHYGVRKIKEACLHLQNQYHGKVNLVLLLKWLDEHQLALSEQQWQQLDAAIERTEHLLEQFRYYRRKAKPHLPDTLYRESLQFELQLERQQQSDLVHCINQMDLSPRSGQPMTHLYCHKVGAEHLCEIFYNTAR
SIO_010081: VCA1004_RS01230
subclass of: SO_0000673
so part of: VCA1004_RS01230
location: complement(263478..263939)
location: region:263478-263939:-1
so has part: feature:263478-263939:-1:exon

WP_086982046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263478-263939:-1:exon

VCA1004_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01235
so part of: sequence
location: complement(263941..265848)
location: region:263941-265848:-1
so has part: feature:263941-265848:-1:exon
subclass of: SO_0000010

position:263941:-1
position: 263941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265848:-1
position: 265848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263941-265848:-1:exon

VCA1004_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012604927.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MITFSNIQLLRGGKPLLDQASATIHPGDKVGLVGKNGCGKSTLFALLKNELSIDAGNFQMPAQWELAWVAQETPALERAALEYVIDGDREYRQLEQDLAAAEQADNGTLVAELHGKLETVGGYTIKSRAAELLNGLGFSQEQMQWNLTQFSGGWRMRLNLAQALLCRSDLLLLDEPTNHLDLDAVLWLEKWLQNYPGTLILISHDRDFLDPIVGRIIHVENQLLNEYTGNYSSFENQRAQKLMQQQAMYAKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALEKMEKVLPAQFDNPFSFEFREPAALPNPIIMMDQVSAGYGDNLILKHIRLNLVPGSRIGLLGRNGAGKSTLIKLLSSELKPQSGDLTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPNHTEQQLRDYLGSFGFIGDKALDKVAPFSGGEKARLVLALVVWQKPNLLLLDEPTNHLDLDMRQALTMALQTFEGAMVIVSHDRYLLRATTDDLYLVDDKQVVPFDGDLGDYYKWLTEQQKQEKKDTQDPVNSEPSQNSAAARKEQKRLEAELRKQTAPIRKKLTQLEAKMDKLSLELAAAEQQLGDVSLYQDENKAKLTEVLAQQASSKSQLEDIEMEWMALQEELESLSS
SIO_010081: VCA1004_RS01235
subclass of: SO_0000673
so part of: VCA1004_RS01235
location: complement(263941..265848)
location: region:263941-265848:-1
so has part: feature:263941-265848:-1:exon

WP_086982047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263941-265848:-1:exon

VCA1004_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: kefG
locus tag: VCA1004_RS01240
so part of: sequence
location: 266135..266746
location: region:266135-266746:1
so has part: feature:266135-266746:1:exon
subclass of: SO_0000010

position:266135:1
position: 266135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266746:1
position: 266746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266135-266746:1:exon

VCA1004_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: kefG
locus tag: VCA1004_RS01240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025421.1
GO process: GO:0006813 - potassium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione-regulated potassium-efflux system ancillary protein KefG
translation: MSKTKESPEEIGSHVNESKVNPRVLVIYAHPDPDNSIANQMLLKAAQGLSNVTIHDLYGRYPDFFIDVAAEHRLLLEHDVIVFQHPLFMYSCPALMKEWMDTVLGKGFAFGKGAALKGKYWRSIVTAGGSKEAFSTRGYNQYPLEQILQPFELTAKLCQMHWVEPMVLYWARNVDKATRIEHAQAYRSWLLHPIELQKVERNA
SIO_010081: VCA1004_RS01240
subclass of: SO_0000673
so part of: VCA1004_RS01240
location: 266135..266746
location: region:266135-266746:1
so has part: feature:266135-266746:1:exon

WP_086982048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266135-266746:1:exon

VCA1004_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: kefB
locus tag: VCA1004_RS01245
so part of: sequence
location: 266746..268536
location: region:266746-268536:1
so has part: feature:266746-268536:1:exon
subclass of: SO_0000010

position:268536:1
position: 268536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266746-268536:1:exon

VCA1004_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: kefB
locus tag: VCA1004_RS01245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006963229.1
GO function: GO:0015503 - glutathione-regulated potassium exporter activity [Evidence IEA]
GO process: GO:0006813 - potassium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione-regulated potassium-efflux system protein KefB
translation: MASTMDFLNSGVVFLAAAVVTVPLAQRLGLGSVLGYLIAGIVIGPWGLGLISDVDSVMHFSELGVVLLLFLIGLELNPKKLWQMRMPILGLGGAQVVVTTFAISAIANAFGVSWQNSLVIGMGLALSSTAIALRVIEEQGLAGTETGQSGFAVLLFQDIAVIPMLALLPLLAGNVGGDWLDAVWMIGGISALLVGGHYLLRPIFRYVVMSRVRELFTVAALLLVIGISVLMSKLGLSMALGTFLAGVLLAESEYRHELETAIEPFKGLLLGLFFMSVGMAVNLELLISYPIKIIAAVLALVSIKGLILYVLARLMGTRSKARSRMAAILSQGGEFAFVLFTAAKGHGLLGPELSSFLLVVVSLSMMTTPLLLLAQHKWFNRTINSQEEMQSDVVNEEPRVIVAGFGRFGQVVGRLLYANKIRITILESDASQIQLLRKFGYKVYYGDATQLDLLRAAGAEQAEAIAICTDSPEEVLKIAELCKHHFPHLKVLARARSRIEAYQLLNLGVTLFSRETFLGALDLGRQVLTELGMHPYQAKRAEAHFRKLDTAMLKELLPQHAEDKEVGIKAREVRQELEEIFDREMESERKIQNYWD
SIO_010081: VCA1004_RS01245
subclass of: SO_0000673
so part of: VCA1004_RS01245
location: 266746..268536
location: region:266746-268536:1
so has part: feature:266746-268536:1:exon

WP_086982049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266746-268536:1:exon

VCA1004_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01250
so part of: sequence
location: 268563..268757
location: region:268563-268757:1
so has part: feature:268563-268757:1:exon
subclass of: SO_0000010

position:268563:1
position: 268563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268757:1
position: 268757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268563-268757:1:exon

VCA1004_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006714809.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YheV family putative zinc ribbon protein
translation: MKKRFIAGAKCPLCEQTDSLRVWEENQIEVVECVECDYVEQKTPQVVEKTPHQAEQLIGIFKPE
SIO_010081: VCA1004_RS01250
subclass of: SO_0000673
so part of: VCA1004_RS01250
location: 268563..268757
location: region:268563-268757:1
so has part: feature:268563-268757:1:exon

WP_086982050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268563-268757:1:exon

VCA1004_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: slyD
locus tag: VCA1004_RS01255
so part of: sequence
location: 268909..269475
location: region:268909-269475:1
so has part: feature:268909-269475:1:exon
subclass of: SO_0000010

position:268909:1
position: 268909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269475:1
position: 269475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268909-269475:1:exon

VCA1004_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: slyD
locus tag: VCA1004_RS01255
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008222340.1
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase
translation: MKIEKNVVVSLAYQVKVEDGVVVDQSTVDAPLDYLHGHNNLITGLEKELEGKVAGDKFTATIAPEDAYGEHNEGLVQRVPANVFHGVDEIEVGMRFLADTDQGQIPVEITEVDGDEVVVDGNHMLAGQTLTFDVEVVAVRAATEEEMAHGHVHQAGHHHDHDGDCCGGHDHEEKKEGCDGNGGCGCSH
SIO_010081: VCA1004_RS01255
subclass of: SO_0000673
so part of: VCA1004_RS01255
location: 268909..269475
location: region:268909-269475:1
so has part: feature:268909-269475:1:exon

WP_086982051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268909-269475:1:exon

VCA1004_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01260
so part of: sequence
location: complement(269611..269841)
location: region:269611-269841:-1
so has part: feature:269611-269841:-1:exon
subclass of: SO_0000010

position:269611:-1
position: 269611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269841:-1
position: 269841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269611-269841:-1:exon

VCA1004_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SlyX family protein
translation: MHSDNLELELKQRIDDLECQVAFQEQTINDLNDALSQQQILISRMQDQMKFVVGKVKNLDASHLADASEETPPPHY
SIO_010081: VCA1004_RS01260
subclass of: SO_0000673
so part of: VCA1004_RS01260
location: complement(269611..269841)
location: region:269611-269841:-1
so has part: feature:269611-269841:-1:exon

WP_086982052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269611-269841:-1:exon

VCA1004_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fkpA
locus tag: VCA1004_RS01265
so part of: sequence
location: 270233..271033
location: region:270233-271033:1
so has part: feature:270233-271033:1:exon
subclass of: SO_0000010

position:270233:1
position: 270233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271033:1
position: 271033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270233-271033:1:exon

VCA1004_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fkpA
locus tag: VCA1004_RS01265
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004729852.1
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FKBP-type peptidyl-prolyl cis-trans isomerase
translation: MKPIFKVSLLAATVLLAVGCQKEESKDAQQAAPKAEQTQSAAASTLYKTDDEKAAYAIGVSFANYLNTSIEKPSEIGINLDKDIVLKGIEDVFAQKAGMTEEETHQALQALDKRVSEKMQAQAAEKAAAAKKAGDEFRANFAKEEGVKKTDSGILYKVEKEGEGMSPKATDTVVVNYEGTLVDGTKFDSSYDRKEPATFPLNRVIPGWTEAVQLMKVGSKYKVVIPPELAYGEQDTPTIPANSTLVFEIELMSVKSADAPQAPAAK
SIO_010081: VCA1004_RS01265
subclass of: SO_0000673
so part of: VCA1004_RS01265
location: 270233..271033
location: region:270233-271033:1
so has part: feature:270233-271033:1:exon

WP_086982053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270233-271033:1:exon

VCA1004_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01270
so part of: sequence
location: 271249..271971
location: region:271249-271971:1
so has part: feature:271249-271971:1:exon
subclass of: SO_0000010

position:271249:1
position: 271249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271971:1
position: 271971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271249-271971:1:exon

VCA1004_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009355703.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MSQSEVVHSEALLEMESVHVMPFTEQDKTILHSYEAVVDGLASLIGSYCEIVLHSLEDLHTSAIKIANGENTGRQVGSPITDLALKMLKDIEGSQRNFSRSYFTRAKGGVLMKSITIAIRNADNRVIGLLCININLDAPFSQVLHAFMPTAEAEEAASSVNFASDVEELVDQTVERTIEEINADKSVSNNTKNRQIVMDLYDKGIFDIKDAINRVADRLNISKHTVYLYIRQRKIEDGEK
SIO_010081: VCA1004_RS01270
subclass of: SO_0000673
so part of: VCA1004_RS01270
location: 271249..271971
location: region:271249-271971:1
so has part: feature:271249-271971:1:exon

WP_086982054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271249-271971:1:exon

VCA1004_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tusD
locus tag: VCA1004_RS01275
so part of: sequence
location: 271968..272369
location: region:271968-272369:1
so has part: feature:271968-272369:1:exon
subclass of: SO_0000010

position:271968:1
position: 271968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272369:1
position: 272369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271968-272369:1:exon

VCA1004_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tusD
locus tag: VCA1004_RS01275
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004399889.1
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusD
translation: MSQASLTYTLVVNGSVYGSQSARHAYQFACALLEKGHQLVSVFFYQDGVHNASGLVLPANDEFDLTKAWQQLSQRHQVRLEACVAASLRRGIVDRHEAETHALDSSNVAAGFELAGLGSLSEALLTQDRVVQF
SIO_010081: VCA1004_RS01275
subclass of: SO_0000673
so part of: VCA1004_RS01275
location: 271968..272369
location: region:271968-272369:1
so has part: feature:271968-272369:1:exon

WP_086982055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271968-272369:1:exon

VCA1004_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tusC
locus tag: VCA1004_RS01280
so part of: sequence
location: 272369..272722
location: region:272369-272722:1
so has part: feature:272369-272722:1:exon
subclass of: SO_0000010

position:272722:1
position: 272722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272369-272722:1:exon

VCA1004_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tusC
locus tag: VCA1004_RS01280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017025429.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusC
translation: MRLGFVFRSYPHTTAKGREGLDALLAASAYCEDIEVFFIGAGVTQLIGSQQPEKIKSRDYIAAFKLLELYDIEKVFVCESSLQAYQLTSQALVIDTQTLNPQQIADKLQQCHKIMTY
SIO_010081: VCA1004_RS01280
subclass of: SO_0000673
so part of: VCA1004_RS01280
location: 272369..272722
location: region:272369-272722:1
so has part: feature:272369-272722:1:exon

WP_086982056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272369-272722:1:exon

VCA1004_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tusB
locus tag: VCA1004_RS01285
so part of: sequence
location: 272736..273017
location: region:272736-273017:1
so has part: feature:272736-273017:1:exon
subclass of: SO_0000010

position:272736:1
position: 272736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273017:1
position: 273017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272736-273017:1:exon

VCA1004_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tusB
locus tag: VCA1004_RS01285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005382799.1
GO function: GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO process: GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusB
translation: MLHIIKTHTGLLDSLPLIQADDDILLIEDAVYALFRQDGLFESLKDRQDQVYVLEEDACARGLNLEAMKLFQNVDFIGFVLLTEQHLQSMTWD
SIO_010081: VCA1004_RS01285
subclass of: SO_0000673
so part of: VCA1004_RS01285
location: 272736..273017
location: region:272736-273017:1
so has part: feature:272736-273017:1:exon

WP_086982057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272736-273017:1:exon

VCA1004_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsL
locus tag: VCA1004_RS01290
so part of: sequence
location: 273205..273579
location: region:273205-273579:1
so has part: feature:273205-273579:1:exon
subclass of: SO_0000010

position:273205:1
position: 273205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273579:1
position: 273579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273205-273579:1:exon

VCA1004_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsL
locus tag: VCA1004_RS01290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MATINQLVRKPRAKQVVKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVNDRKQGRSKYGVKRPKS
SIO_010081: VCA1004_RS01290
subclass of: SO_0000673
so part of: VCA1004_RS01290
location: 273205..273579
location: region:273205-273579:1
so has part: feature:273205-273579:1:exon

WP_004399892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273205-273579:1:exon

VCA1004_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsG
locus tag: VCA1004_RS01295
so part of: sequence
location: 273693..274163
location: region:273693-274163:1
so has part: feature:273693-274163:1:exon
subclass of: SO_0000010

position:273693:1
position: 273693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274163:1
position: 274163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273693-274163:1:exon

VCA1004_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsG
locus tag: VCA1004_RS01295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MPRRRVIGQRKILPDPKFKSELLAKFVNILMVDGKKSTAEKIVYTALDTMAEKSGKDHLAVFEEALENVRPAVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWLVEAARKRGEKSMAMRLAAEMLDASENKGTAVKKREDVHRMADANKAFAHYRW
SIO_010081: VCA1004_RS01295
subclass of: SO_0000673
so part of: VCA1004_RS01295
location: 273693..274163
location: region:273693-274163:1
so has part: feature:273693-274163:1:exon

WP_027696492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273693-274163:1:exon

VCA1004_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fusA
locus tag: VCA1004_RS01300
so part of: sequence
location: 274314..276410
location: region:274314-276410:1
so has part: feature:274314-276410:1:exon
subclass of: SO_0000010

position:274314:1
position: 274314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276410:1
position: 276410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274314-276410:1:exon

VCA1004_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fusA
locus tag: VCA1004_RS01300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017020396.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MARKTPIERYRNIGICAHVDAGKTTTTERILFYTGLSHKIGEVHDGAATMDWMEQEQERGITITSAATTTFWRGMEAQFEEHRVNIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQADKYHVPRIVFVNKMDRAGADFLRVVNQIKNRLGATPVPIQLNIGAEEEFKGVIDLIKMKAINWNEADQGMTFTYEEIPADMQELADEWRSHLVEAAAEATEELMDKYLEGEELSEAEIKQALRARTLNNEIVLATCGSAFKNKGVQAVLDAVIDYLPSPTEVPSIKGIDEDENEVERHADDNEPFAALAFKIATDPFVGTLTFMRVYSGKVNSGDTVYNSVKQKRERFGRIVQMHSNKREEIKEVLAGDIAAAIGLKDVTTGDTLCDQNHKVILERMEFPEPVIQIVVEPRSTADQDKMAIALGKLAAEDPSFRVETDDETGQTLISGMGELHLDIIVDRMKREFSVDCNVGKPQVAYRETIRGKAEVEGKFIRQSGGRGQYGHVWLKLEPSEPGEGFVFVDEIVGGAVPREFISSVSKGIEEQMNNGVLAGYPVMDIKATLFDGSYHDVDSSEMAFKIAGSMAFKKGALEAQPVLLEPMMKVEVTTPEDWMGDVVGDLNRRRGIIEGMEEGYGGLKIIRAQVPLSVMFGYATDLRSATQGRASYSMEFSEYAEVPKNVAEAIIAERG
SIO_010081: VCA1004_RS01300
subclass of: SO_0000673
so part of: VCA1004_RS01300
location: 274314..276410
location: region:274314-276410:1
so has part: feature:274314-276410:1:exon

WP_086982058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274314-276410:1:exon

VCA1004_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tuf
locus tag: VCA1004_RS01305
so part of: sequence
location: 276562..277746
location: region:276562-277746:1
so has part: feature:276562-277746:1:exon
subclass of: SO_0000010

position:276562:1
position: 276562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277746:1
position: 277746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276562-277746:1:exon

VCA1004_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tuf
locus tag: VCA1004_RS01305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011151305.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAICTTLSKVYGGSARDFASIDNAPEERERGITIATSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGPMPQTREHILLGRQVGIPYIIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALGALNGEEQWEAKIIELAEALDSYIPEPERAVDQPFLLPIEDVFSIQGRGTVVTGRIERGILRVGDEVEIVGIKDTTVTTCTGVEMFRKLLDEGRAGENVGALLRGTKRDDVERGQVLAAPKSINPHTTFESEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGDIQLPEGVEMVMPGDNVQMTVTLIAPIAMDEGLRFAIREGGRTVGAGVVAKVIA
SIO_010081: VCA1004_RS01305
subclass of: SO_0000673
so part of: VCA1004_RS01305
location: 276562..277746
location: region:276562-277746:1
so has part: feature:276562-277746:1:exon

WP_086981798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276562-277746:1:exon

VCA1004_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsJ
locus tag: VCA1004_RS01310
so part of: sequence
location: 278263..278574
location: region:278263-278574:1
so has part: feature:278263-278574:1:exon
subclass of: SO_0000010

position:278263:1
position: 278263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278574:1
position: 278574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278263-278574:1:exon

VCA1004_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsJ
locus tag: VCA1004_RS01310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MQNQRIRIRLKAFDYRLIDQSTAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHKRLIDIVEPTDKTVDALMRLDLAAGVDVQISLG
SIO_010081: VCA1004_RS01310
subclass of: SO_0000673
so part of: VCA1004_RS01310
location: 278263..278574
location: region:278263-278574:1
so has part: feature:278263-278574:1:exon

WP_086982059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278263-278574:1:exon

VCA1004_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplC
locus tag: VCA1004_RS01315
so part of: sequence
location: 278588..279217
location: region:278588-279217:1
so has part: feature:278588-279217:1:exon
subclass of: SO_0000010

position:278588:1
position: 278588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279217:1
position: 279217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278588-279217:1:exon

VCA1004_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplC
locus tag: VCA1004_RS01315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MIGLVGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVRTLENDGYSAIQVTAGAKKANRVSKPEAGHFAKAGVEAGRGLWEFRLENGEEFEVGAELNVELFNEIKKVDVTGTSKGKGFQGAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGAIGGNVIVKPAVKA
SIO_010081: VCA1004_RS01315
subclass of: SO_0000673
so part of: VCA1004_RS01315
location: 278588..279217
location: region:278588-279217:1
so has part: feature:278588-279217:1:exon

WP_086982060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278588-279217:1:exon

VCA1004_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplD
locus tag: VCA1004_RS01320
so part of: sequence
location: 279234..279836
location: region:279234-279836:1
so has part: feature:279234-279836:1:exon
subclass of: SO_0000010

position:279234:1
position: 279234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279836:1
position: 279836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279234-279836:1:exon

VCA1004_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplD
locus tag: VCA1004_RS01320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: MELMVKGADALTVSETTFGREFNEALVHQVVVAYAAGARQGTRAQKTRSEVSGGGAKPWRQKGTGRARAGTIRSPIWRTGGVTFAAKPQNYSQKVNKKMYRGAMKAILSELVRQERLIVVDNFSVEAPKTKDLVAKLKDLELNDVLIVTSEVDENLFLAARNLYKVDARDVAGIDPVSLIAFDKVLMTAEAVKQVEEMLA
SIO_010081: VCA1004_RS01320
subclass of: SO_0000673
so part of: VCA1004_RS01320
location: 279234..279836
location: region:279234-279836:1
so has part: feature:279234-279836:1:exon

WP_086982061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279234-279836:1:exon

VCA1004_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplW
locus tag: VCA1004_RS01325
so part of: sequence
location: 279833..280135
location: region:279833-280135:1
so has part: feature:279833-280135:1:exon
subclass of: SO_0000010

position:279833:1
position: 279833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280135:1
position: 280135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279833-280135:1:exon

VCA1004_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplW
locus tag: VCA1004_RS01325
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312210.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L23
translation: MISEERLLKVLRAPHISEKATMAAEKANTIVFKVATNATKKEIKAAVEKLFEVEVKSVNTLVLKGKTKRQGMREGRRSDVKKAYVTLKEGQDLDFVGGAE
SIO_010081: VCA1004_RS01325
subclass of: SO_0000673
so part of: VCA1004_RS01325
location: 279833..280135
location: region:279833-280135:1
so has part: feature:279833-280135:1:exon

WP_086982062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279833-280135:1:exon

VCA1004_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplB
locus tag: VCA1004_RS01330
so part of: sequence
location: 280151..280975
location: region:280151-280975:1
so has part: feature:280151-280975:1:exon
subclass of: SO_0000010

position:280151:1
position: 280151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280975:1
position: 280975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280151-280975:1:exon

VCA1004_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplB
locus tag: VCA1004_RS01330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005417230.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MAIVKCKPTSPGRRHVVKVVNADLHKGKPYAPLLEKNSKNGGRNNNGRITVRHIGGGHKHHYRLIDFKRTKDGIPAKVERLEYDPNRSANIALVLYADGERRYIIAPKGIQAGDAIQSGVDAPIKAGNTLPMRNIPVGSTIHCIELKPGKGAQLARSAGAYAQLVARDGAYVTLRLRSGEMRKVLSEGRATIGEVGNSEHMLRELGKAGANRWRGVRPTVRGVVMNPVDHPHGGGEGRTSGGRHPVSPWGMPTKGFKTRKNKRTDKYIVRRRNK
SIO_010081: VCA1004_RS01330
subclass of: SO_0000673
so part of: VCA1004_RS01330
location: 280151..280975
location: region:280151-280975:1
so has part: feature:280151-280975:1:exon

WP_086982063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280151-280975:1:exon

VCA1004_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsS
locus tag: VCA1004_RS01335
so part of: sequence
location: 280995..281273
location: region:280995-281273:1
so has part: feature:280995-281273:1:exon
subclass of: SO_0000010

position:280995:1
position: 280995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281273:1
position: 281273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280995-281273:1:exon

VCA1004_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsS
locus tag: VCA1004_RS01335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MPRSLKKGPFIDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVFVTDEMIGHKLGEFAPTRTYRGHAADKKAKKK
SIO_010081: VCA1004_RS01335
subclass of: SO_0000673
so part of: VCA1004_RS01335
location: 280995..281273
location: region:280995-281273:1
so has part: feature:280995-281273:1:exon

WP_004398469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280995-281273:1:exon

VCA1004_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplV
locus tag: VCA1004_RS01340
so part of: sequence
location: 281284..281616
location: region:281284-281616:1
so has part: feature:281284-281616:1:exon
subclass of: SO_0000010

position:281284:1
position: 281284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281616:1
position: 281616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281284-281616:1:exon

VCA1004_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplV
locus tag: VCA1004_RS01340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012549155.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: MEAIAKHNFARISPQKARLVADQIRGKSVEQALEILTFSNKKAADLIKKVLDSAIANAEHNEGADIDDLSVAKIFVDEGPIMKRIMPRAKGRADRILKRSSHITVVVADR
SIO_010081: VCA1004_RS01340
subclass of: SO_0000673
so part of: VCA1004_RS01340
location: 281284..281616
location: region:281284-281616:1
so has part: feature:281284-281616:1:exon

WP_086982064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281284-281616:1:exon

VCA1004_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsC
locus tag: VCA1004_RS01345
so part of: sequence
location: 281637..282338
location: region:281637-282338:1
so has part: feature:281637-282338:1:exon
subclass of: SO_0000010

position:281637:1
position: 281637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282338:1
position: 282338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281637-282338:1:exon

VCA1004_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsC
locus tag: VCA1004_RS01345
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229162.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGQKVHPNGIRLGIVKPWNATWFANTNEFADNLDGDFKVRQFLTKELSKASLSRIVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSISSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYATSSAHTQYGVIGVKVWIFKGEILGGMPDANAVEPKADKPKKKPRQSRK
SIO_010081: VCA1004_RS01345
subclass of: SO_0000673
so part of: VCA1004_RS01345
location: 281637..282338
location: region:281637-282338:1
so has part: feature:281637-282338:1:exon

WP_017026389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281637-282338:1:exon

VCA1004_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplP
locus tag: VCA1004_RS01350
so part of: sequence
location: 282350..282760
location: region:282350-282760:1
so has part: feature:282350-282760:1:exon
subclass of: SO_0000010

position:282350:1
position: 282350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282760:1
position: 282760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282350-282760:1:exon

VCA1004_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplP
locus tag: VCA1004_RS01350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MLQPKRTKFRKVMTGRNRGLAKGTDVSFGEYGLKAVGRGRITARQIEAARRAMTRHVKRQGQIWIRIFPDKPITEKPLEVRQGKGKGNVEYWVAQIQPGKVMYEMGGVPEELAREAFRLAARKLPIKTTFVTKQVM
SIO_010081: VCA1004_RS01350
subclass of: SO_0000673
so part of: VCA1004_RS01350
location: 282350..282760
location: region:282350-282760:1
so has part: feature:282350-282760:1:exon

WP_017026388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282350-282760:1:exon

VCA1004_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpmC
locus tag: VCA1004_RS01355
so part of: sequence
location: 282760..282951
location: region:282760-282951:1
so has part: feature:282760-282951:1:exon
subclass of: SO_0000010

position:282951:1
position: 282951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282760-282951:1:exon

VCA1004_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpmC
locus tag: VCA1004_RS01355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000647192.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L29
translation: MKAQDLREKSVEELNAELLNLLREQFNLRMQAATGQLQQTHTLKAVRRDIARVKTVLTSKAGA
SIO_010081: VCA1004_RS01355
subclass of: SO_0000673
so part of: VCA1004_RS01355
location: 282760..282951
location: region:282760-282951:1
so has part: feature:282760-282951:1:exon

WP_017026387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282760-282951:1:exon

VCA1004_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsQ
locus tag: VCA1004_RS01360
so part of: sequence
location: 282951..283205
location: region:282951-283205:1
so has part: feature:282951-283205:1:exon
subclass of: SO_0000010

position:283205:1
position: 283205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282951-283205:1:exon

VCA1004_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsQ
locus tag: VCA1004_RS01360
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312203.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MSETTRTTQGRVISDKMDKSIVVAIERFVKHPIYGKFIKRTTKVHAHDENNECGLGDKVEIRECRPMSKTKSWTLVKVLEKAKI
SIO_010081: VCA1004_RS01360
subclass of: SO_0000673
so part of: VCA1004_RS01360
location: 282951..283205
location: region:282951-283205:1
so has part: feature:282951-283205:1:exon

WP_086982065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282951-283205:1:exon

VCA1004_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplN
locus tag: VCA1004_RS01365
so part of: sequence
location: 283370..283741
location: region:283370-283741:1
so has part: feature:283370-283741:1:exon
subclass of: SO_0000010

position:283370:1
position: 283370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283741:1
position: 283741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283370-283741:1:exon

VCA1004_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplN
locus tag: VCA1004_RS01365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQMQSTLDAADNSGARRVMCIKVLGGSHRRYAHIGDIIKVTVKEAIPRGKVKKGDVLKAVVVRTRKGVRRPDGSVIRFDRNACVLLNDNTEQPVGTRIFGPVTRELRNAKFMKIVSLAPEVL
SIO_010081: VCA1004_RS01365
subclass of: SO_0000673
so part of: VCA1004_RS01365
location: 283370..283741
location: region:283370-283741:1
so has part: feature:283370-283741:1:exon

WP_017026385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283370-283741:1:exon

VCA1004_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplX
locus tag: VCA1004_RS01370
so part of: sequence
location: 283756..284070
location: region:283756-284070:1
so has part: feature:283756-284070:1:exon
subclass of: SO_0000010

position:283756:1
position: 283756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284070:1
position: 284070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283756-284070:1:exon

VCA1004_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplX
locus tag: VCA1004_RS01370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005417243.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MAAKIRRNDEVIVLAGKDKGKRGKVTKVLETGKVFVEGINLVKKHQKPQPALGQQGGIVEQEAAIDASNVAIFNASTGKADRIGFRFEEGKKVRFFKSNGELIK
SIO_010081: VCA1004_RS01370
subclass of: SO_0000673
so part of: VCA1004_RS01370
location: 283756..284070
location: region:283756-284070:1
so has part: feature:283756-284070:1:exon

WP_086982066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283756-284070:1:exon

VCA1004_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplE
locus tag: VCA1004_RS01375
so part of: sequence
location: 284085..284624
location: region:284085-284624:1
so has part: feature:284085-284624:1:exon
subclass of: SO_0000010

position:284085:1
position: 284085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284624:1
position: 284624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284085-284624:1:exon

VCA1004_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplE
locus tag: VCA1004_RS01375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MAKLHDYYKSSVVAELTKEFSYTSVMQVPRIEKITLNMGVGEAINDKKLLENAASDMATISGQKPLITKARKSVAGFKIREGYPIGCKVTLRGERMWDFLERLISIALPRVRDFRGVSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTSANTDEEGRALLAAFNFPFRK
SIO_010081: VCA1004_RS01375
subclass of: SO_0000673
so part of: VCA1004_RS01375
location: 284085..284624
location: region:284085-284624:1
so has part: feature:284085-284624:1:exon

WP_086982067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284085-284624:1:exon

VCA1004_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsN
locus tag: VCA1004_RS01380
so part of: sequence
location: 284642..284947
location: region:284642-284947:1
so has part: feature:284642-284947:1:exon
subclass of: SO_0000010

position:284642:1
position: 284642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284947:1
position: 284947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284642-284947:1:exon

VCA1004_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsN
locus tag: VCA1004_RS01380
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312199.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S14
translation: MAKQSMKARETKRAKLVAQYAEKRAALKATISDVNASEEDRWNAVLKLQALPRDSSASRQRNRCNQTGRPHGYLRKFGLSRIKVREACMKGEIPGLRKASW
SIO_010081: VCA1004_RS01380
subclass of: SO_0000673
so part of: VCA1004_RS01380
location: 284642..284947
location: region:284642-284947:1
so has part: feature:284642-284947:1:exon

WP_027697919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284642-284947:1:exon

VCA1004_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsH
locus tag: VCA1004_RS01385
so part of: sequence
location: 284977..285369
location: region:284977-285369:1
so has part: feature:284977-285369:1:exon
subclass of: SO_0000010

position:284977:1
position: 284977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285369:1
position: 285369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284977-285369:1:exon

VCA1004_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsH
locus tag: VCA1004_RS01385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MSMQDPISDMLTRIRNGQAANKVAVKMPSSKLKVAIATLLKAEGYIADFAIEGEVKPVLEVTLKYFQAKPVIEQIQRVSRPGLRVYKKKDELPSVMGGLGVAVVSTSKGLMSDRAARKAGLGGEIICYVA
SIO_010081: VCA1004_RS01385
subclass of: SO_0000673
so part of: VCA1004_RS01385
location: 284977..285369
location: region:284977-285369:1
so has part: feature:284977-285369:1:exon

WP_086982068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284977-285369:1:exon

VCA1004_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplF
locus tag: VCA1004_RS01390
so part of: sequence
location: 285380..285913
location: region:285380-285913:1
so has part: feature:285380-285913:1:exon
subclass of: SO_0000010

position:285380:1
position: 285380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285913:1
position: 285913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285380-285913:1:exon

VCA1004_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplF
locus tag: VCA1004_RS01390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MSRVAKAPVAIPAGVEVKLNGQEITVKGAKGELSRVLHDAVVIAQEENNLTFGPREGVVNAWAQAGTARALVNNMVVGVTEGFTKKLVLKGVGYRAAIKGNAVSLTLGFSHPVEHELPSGVKAECPSQTEIVLTACDKQLVGQVAADIRSYREPEPYKGKGVRYADENVRTKEAKKK
SIO_010081: VCA1004_RS01390
subclass of: SO_0000673
so part of: VCA1004_RS01390
location: 285380..285913
location: region:285380-285913:1
so has part: feature:285380-285913:1:exon

WP_086982069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285380-285913:1:exon

VCA1004_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplR
locus tag: VCA1004_RS01395
so part of: sequence
location: 285923..286276
location: region:285923-286276:1
so has part: feature:285923-286276:1:exon
subclass of: SO_0000010

position:285923:1
position: 285923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286276:1
position: 286276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285923-286276:1:exon

VCA1004_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplR
locus tag: VCA1004_RS01395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MDKKASRIRRATRARRKIAELGANRLVVHRTPRHVYAQVIAPNGSVVIASASTVEKAIREQVKNTGNVDAAKAVGKAIAERAIEKGITDVAFDRSGFQYHGRVAALADSAREAGLKF
SIO_010081: VCA1004_RS01395
subclass of: SO_0000673
so part of: VCA1004_RS01395
location: 285923..286276
location: region:285923-286276:1
so has part: feature:285923-286276:1:exon

WP_086982070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285923-286276:1:exon

VCA1004_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsE
locus tag: VCA1004_RS01400
so part of: sequence
location: 286291..286791
location: region:286291-286791:1
so has part: feature:286291-286791:1:exon
subclass of: SO_0000010

position:286291:1
position: 286291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286791:1
position: 286791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286291-286791:1:exon

VCA1004_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsE
locus tag: VCA1004_RS01400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004736754.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MAKQEQQASDLNEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMVTIALNEGTLHHAVKGRHTGSKVYMQPAAEGTGIIAGGAMRAVLEVVGVHNVLAKAYGSTNPINIVRATIDGLSGMKSPEMVAAKRGLTVESISE
SIO_010081: VCA1004_RS01400
subclass of: SO_0000673
so part of: VCA1004_RS01400
location: 286291..286791
location: region:286291-286791:1
so has part: feature:286291-286791:1:exon

WP_086982071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286291-286791:1:exon

VCA1004_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpmD
locus tag: VCA1004_RS01405
so part of: sequence
location: 286799..286975
location: region:286799-286975:1
so has part: feature:286799-286975:1:exon
subclass of: SO_0000010

position:286799:1
position: 286799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286975:1
position: 286975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286799-286975:1:exon

VCA1004_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpmD
locus tag: VCA1004_RS01405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L30
translation: MATIKVTQTKSSIGRLPKHKATLRGLGLRKINHTVELEDTACVRGMINKVQYMVKVEE
SIO_010081: VCA1004_RS01405
subclass of: SO_0000673
so part of: VCA1004_RS01405
location: 286799..286975
location: region:286799-286975:1
so has part: feature:286799-286975:1:exon

WP_086982072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286799-286975:1:exon

VCA1004_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplO
locus tag: VCA1004_RS01410
so part of: sequence
location: 286981..287415
location: region:286981-287415:1
so has part: feature:286981-287415:1:exon
subclass of: SO_0000010

position:286981:1
position: 286981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287415:1
position: 287415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286981-287415:1:exon

VCA1004_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplO
locus tag: VCA1004_RS01410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026376.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MRLNTLSPAAGSKPSKKRLGRGIGSGLGKTGGRGHKGQKSRSGGSVRPGFEGGQMPLKQRLPKFGFTSRKSLVSAEVRLAELAKVTADVIDLDSLKAANVITKNIEFVKVVLSGEISKPVTVKGLRVTKGAQAAIEAAGGKIEA
SIO_010081: VCA1004_RS01410
subclass of: SO_0000673
so part of: VCA1004_RS01410
location: 286981..287415
location: region:286981-287415:1
so has part: feature:286981-287415:1:exon

WP_086982073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286981-287415:1:exon

VCA1004_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: secY
locus tag: VCA1004_RS01415
so part of: sequence
location: 287436..288770
location: region:287436-288770:1
so has part: feature:287436-288770:1:exon
subclass of: SO_0000010

position:287436:1
position: 287436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288770:1
position: 288770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287436-288770:1:exon

VCA1004_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: secY
locus tag: VCA1004_RS01415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecY
translation: MAKKPGQDFSTSKQGTGELKSRLLFVILALLVFRAGSFVPIPGIDAAVLADLFEQQKGTIIEMFNMFSGGALSRASILSLGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISRYTRYGTLVLATFQAIGIATGLPNMVQNLVVIDQTLFTIIATISLVTGTMFLMWLGEQITERGIGNGISLIIFTGIVAGLPAAIGHTIEQARQGELNVLLLLLIAVVAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWLGQNGESKTFGWLTDVSLALSPGQPLYIILYATAIIFFCFFYTAMVFNPRETADNLKKSGAFVPGIRPGEQTARYIDKVMTRLTLVGALYITFICLVPQFMMTAWNVKFYFGGTSLLIVVVVIMDFMAQVQTHLMSQQYDSVLKKANLKGYGR
SIO_010081: VCA1004_RS01415
subclass of: SO_0000673
so part of: VCA1004_RS01415
location: 287436..288770
location: region:287436-288770:1
so has part: feature:287436-288770:1:exon

WP_086982074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287436-288770:1:exon

VCA1004_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpmJ
locus tag: VCA1004_RS01420
so part of: sequence
location: 288812..288925
location: region:288812-288925:1
so has part: feature:288812-288925:1:exon
subclass of: SO_0000010

position:288812:1
position: 288812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288925:1
position: 288925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288812-288925:1:exon

VCA1004_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpmJ
locus tag: VCA1004_RS01420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006232360.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVRASVKKICRNCKVIKRNGVVRVICSEPKHKQRQG
SIO_010081: VCA1004_RS01420
subclass of: SO_0000673
so part of: VCA1004_RS01420
location: 288812..288925
location: region:288812-288925:1
so has part: feature:288812-288925:1:exon

WP_000868186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288812-288925:1:exon

VCA1004_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsM
locus tag: VCA1004_RS01425
so part of: sequence
location: 289073..289429
location: region:289073-289429:1
so has part: feature:289073-289429:1:exon
subclass of: SO_0000010

position:289073:1
position: 289073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289429:1
position: 289429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289073-289429:1:exon

VCA1004_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsM
locus tag: VCA1004_RS01425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAEDVKISELTEEQINQLRDGVAKYTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPIKK
SIO_010081: VCA1004_RS01425
subclass of: SO_0000673
so part of: VCA1004_RS01425
location: 289073..289429
location: region:289073-289429:1
so has part: feature:289073-289429:1:exon

WP_086982075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289073-289429:1:exon

VCA1004_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsK
locus tag: VCA1004_RS01430
so part of: sequence
location: 289451..289840
location: region:289451-289840:1
so has part: feature:289451-289840:1:exon
subclass of: SO_0000010

position:289451:1
position: 289451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289840:1
position: 289840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289451-289840:1:exon

VCA1004_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsK
locus tag: VCA1004_RS01430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MAKQPTRTRKRVRKQVADGVAHIHASFNNTIVTISDRQGNALAWATAGGSGFRGSRKSTPFAAQVAAERAGEMAKEYGLKNLEVMVKGPGPGRESTIRALNALGYRITNIVDATPIPHNGCRPPKKRRV
SIO_010081: VCA1004_RS01430
subclass of: SO_0000673
so part of: VCA1004_RS01430
location: 289451..289840
location: region:289451-289840:1
so has part: feature:289451-289840:1:exon

WP_086982076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289451-289840:1:exon

VCA1004_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsD
locus tag: VCA1004_RS01435
so part of: sequence
location: 289870..290490
location: region:289870-290490:1
so has part: feature:289870-290490:1:exon
subclass of: SO_0000010

position:289870:1
position: 289870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290490:1
position: 290490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289870-290490:1:exon

VCA1004_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsD
locus tag: VCA1004_RS01435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEFGVQLREKQKVRRMYGVLEKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLVSHKAILVNGKVVNVPSFKVTANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDASKMEGVFKRIPERSDLSADINEHLIVELYSK
SIO_010081: VCA1004_RS01435
subclass of: SO_0000673
so part of: VCA1004_RS01435
location: 289870..290490
location: region:289870-290490:1
so has part: feature:289870-290490:1:exon

WP_086982077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289870-290490:1:exon

VCA1004_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpoA
locus tag: VCA1004_RS01440
so part of: sequence
location: 290515..291507
location: region:290515-291507:1
so has part: feature:290515-291507:1:exon
subclass of: SO_0000010

position:290515:1
position: 290515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291507:1
position: 291507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290515-291507:1:exon

VCA1004_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpoA
locus tag: VCA1004_RS01440
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
translation: MQGSVTEFLKPRLVDIEQISTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIEGVLHEYSTKEGVQEDILEILLNLKGLAVSVAEGKDEVFITLKKSGSGPVVAGDIIHDGDVEIANPEHVICHLTDDKSEIAMRIKVQRGRGYVPSSARIHTEEDERPIGRLLVDATYSPVDKIAYAVEAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRVPEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIAED
SIO_010081: VCA1004_RS01440
subclass of: SO_0000673
so part of: VCA1004_RS01440
location: 290515..291507
location: region:290515-291507:1
so has part: feature:290515-291507:1:exon

WP_086982078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290515-291507:1:exon

VCA1004_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplQ
locus tag: VCA1004_RS01445
so part of: sequence
location: 291534..291920
location: region:291534-291920:1
so has part: feature:291534-291920:1:exon
subclass of: SO_0000010

position:291534:1
position: 291534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291920:1
position: 291920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291534-291920:1:exon

VCA1004_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplQ
locus tag: VCA1004_RS01445
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229143.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L17
translation: MRHRKSGRQLNRNSSHRKAMFSNMASSLVRHEVIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEVVAKLFNELGPRFAARQGGYTRILKAGFRAGDKAPMAYIELVDRPEAAAEEAAE
SIO_010081: VCA1004_RS01445
subclass of: SO_0000673
so part of: VCA1004_RS01445
location: 291534..291920
location: region:291534-291920:1
so has part: feature:291534-291920:1:exon

WP_086982079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291534-291920:1:exon

VCA1004_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01450
so part of: sequence
location: complement(292215..292679)
location: region:292215-292679:-1
so has part: feature:292215-292679:-1:exon
subclass of: SO_0000010

position:292215:-1
position: 292215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292679:-1
position: 292679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292215-292679:-1:exon

VCA1004_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2780 domain-containing protein
translation: MKKLALTLIAASLVVSSPSYALFGLGDKDSDAVTKLASQVQSSSTLVNSLKDQLGVSTEQAAGGAGALLAMASTQLSGSAEDELSGLSSNLSGLLDTAKSTSNTLDSMAAVKTVFEKLGLDSSMVEQYVPIVLDYLGDEGASSGLLSSLTGLWK
SIO_010081: VCA1004_RS01450
subclass of: SO_0000673
so part of: VCA1004_RS01450
location: complement(292215..292679)
location: region:292215-292679:-1
so has part: feature:292215-292679:-1:exon

WP_086982080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292215-292679:-1:exon

VCA1004_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01455
so part of: sequence
location: complement(292789..293409)
location: region:292789-293409:-1
so has part: feature:292789-293409:-1:exon
subclass of: SO_0000010

position:292789:-1
position: 292789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293409:-1
position: 293409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292789-293409:-1:exon

VCA1004_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019282418.1
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FKBP-type peptidyl-prolyl cis-trans isomerase
translation: MSDVKLETIEQKASYGIGLQMGQQLAGSGLEGLNVAAIAKGIATSLTGDMPEIEVDDINNALRELHTRAEALRAEAAKAAAADGEAFLKDNALRPEVTVLESGLQYEVITEGTGEVPTSDKQVRVHYHGQLTDGTVFDSSVTRGQPAEFPVTGVIAGWVEALQLMPVGSKWKLYIPQNLAYGERGAGAAIPPFAALVFEVELLAIL
SIO_010081: VCA1004_RS01455
subclass of: SO_0000673
so part of: VCA1004_RS01455
location: complement(292789..293409)
location: region:292789-293409:-1
so has part: feature:292789-293409:-1:exon

WP_086982081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292789-293409:-1:exon

VCA1004_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01460
so part of: sequence
location: 293586..294230
location: region:293586-294230:1
so has part: feature:293586-294230:1:exon
subclass of: SO_0000010

position:293586:1
position: 293586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294230:1
position: 294230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293586-294230:1:exon

VCA1004_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysM-like peptidoglycan-binding domain-containing protein
translation: MNQRKKQPHSRIYALRQTITQCQFSQSVIHVWRSLPKVHQRSLIILLPLVLLLLLWPTSEEGRSEQADSVTSVDKPSRMTVPLIINGEETAATKPKPKIETHEQRVQLSGGSDANEEVTRKVSNNAGPEPWNDYTVKQGDTLSQVFRNNDLALSDLTQLLEIQGKDKPLSHIKEGQLIRFKLTNRGDLDILQLEKEDGAVMFFRLSSGGFERSR
SIO_010081: VCA1004_RS01460
subclass of: SO_0000673
so part of: VCA1004_RS01460
location: 293586..294230
location: region:293586-294230:1
so has part: feature:293586-294230:1:exon

WP_086982082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293586-294230:1:exon

VCA1004_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01465
so part of: sequence
location: complement(294232..294687)
location: region:294232-294687:-1
so has part: feature:294232-294687:-1:exon
subclass of: SO_0000010

position:294232:-1
position: 294232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294687:-1
position: 294687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294232-294687:-1:exon

VCA1004_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004728623.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MQWICKSFEQLSTLELYQVLQLRVNVFVVEQTCPYPELDGKDYLPGVYHLLGYQDGELIACTRLLAAGISYDTVSIGRVAAHPSIRGQGLGHQLMQVSIEQCQQLWGEVDITIGAQAHLEKYYRQHGFKSISEEYLEDDIPHIDMIRHASR
SIO_010081: VCA1004_RS01465
subclass of: SO_0000673
so part of: VCA1004_RS01465
location: complement(294232..294687)
location: region:294232-294687:-1
so has part: feature:294232-294687:-1:exon

WP_086982083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294232-294687:-1:exon

VCA1004_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: cobA
locus tag: VCA1004_RS01470
so part of: sequence
location: 294884..295762
location: region:294884-295762:1
so has part: feature:294884-295762:1:exon
subclass of: SO_0000010

position:294884:1
position: 294884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295762:1
position: 295762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294884-295762:1:exon

VCA1004_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: cobA
locus tag: VCA1004_RS01470
EC number: 2.1.1.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019276769.1
GO function: GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO process: GO:0019354 - siroheme biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen-III C-methyltransferase
translation: MDTVALFPNKKSPQTSSSNPVGMKEALPPFSKSRLMAGQVALIGAGPGDAELLTIKALSYLQQADVVLYDYLVSDDIMALIPDSTILVCVGKRAGHHSVPQEKTNQLLIDFAQQGYKVARIKGGDPFMFGRGGEELEVLARAGIGFEVIPGITAAAGATAYAGIPLTHRDYAQSAMFITGHLQSEHDHMDWTTLARGKQTLVIYMGLMKSSYIQQQLMDHGRHIDTPIAIIERGTQRQQKVLIGKLTDLATLAQQAESPALIVVGEVVQLAEQLAWFGPKAQNLESVQSLAV
SIO_010081: VCA1004_RS01470
subclass of: SO_0000673
so part of: VCA1004_RS01470
location: 294884..295762
location: region:294884-295762:1
so has part: feature:294884-295762:1:exon

WP_086982084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294884-295762:1:exon

VCA1004_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: cysD
locus tag: VCA1004_RS01475
so part of: sequence
location: 295828..296736
location: region:295828-296736:1
so has part: feature:295828-296736:1:exon
subclass of: SO_0000010

position:295828:1
position: 295828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296736:1
position: 296736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295828-296736:1:exon

VCA1004_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: cysD
locus tag: VCA1004_RS01475
EC number: 2.7.7.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004738750.1
GO function: GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO process: GO:0019419 - sulfate reduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfate adenylyltransferase subunit CysD
translation: MEQERLTHLQQLEAESIHIIREVAAEFDNPVMMYSIGKDSAVMLHLARKAFYPGKIPFPLLHVDTDWKFKEMIEFRDRTAKKYGFDLLVHKNPEGLAMGCNPFVHGSSKHTDIMKTQGLKQALNKYGFDAAFGGARRDEEKSRAKERVYSFRDKHHTWDPKNQRPELWHTYNGQVNKGESIRVFPLSNWTELDIWQYIYLENIEIVPLYLAAVRPVVERDGMLIMVDDDRFQFEEGDKVEQKSVRFRTLGCYPLTGAIESTAATLPEIIQEMLVATSSERQGRAIDHDQSGSMELKKRQGYF
SIO_010081: VCA1004_RS01475
subclass of: SO_0000673
so part of: VCA1004_RS01475
location: 295828..296736
location: region:295828-296736:1
so has part: feature:295828-296736:1:exon

WP_086982085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295828-296736:1:exon

VCA1004_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: cysN
locus tag: VCA1004_RS01480
so part of: sequence
location: 296790..298241
location: region:296790-298241:1
so has part: feature:296790-298241:1:exon
subclass of: SO_0000010

position:296790:1
position: 296790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298241:1
position: 298241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296790-298241:1:exon

VCA1004_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: cysN
locus tag: VCA1004_RS01480
EC number: 2.7.7.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010318791.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0006790 - sulfur compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfate adenylyltransferase subunit CysN
translation: MNAVIEAELAELGIEGYLTQHQYKSLMRFLTCGSVDDGKSTLIGRLLHDSKQIYEDQLAAVNNDSQRVGTTGERPDLALLVDGLQAEREQGITIDVAYRYFSTKKRKFIIADTPGHEQYTRNMATGASTCDVAVILIDARKGVLDQTRRHSFISSLLGIRNFVVAVNKMDLVDYSQQRFDEIREQYLAFSQHLNPNIDIQLIPISALEGDNVVDQTQNLAWYQGKPLLQILEDIDLSQAHTQGEFRLPVQYVNRPNLDFRGFAGTIANGTISVGDEITALPSGKSSKVARIVTFDGDLDSARAGQAVTLTLQDEIDISRGDLLVPTGAKIKATNQFLADVVWMTDQPFAPGRQYDIKIAGKKTIGQLEQVKHQYDINKLEAFDATELPLNGIGLCEISLTETVALDHYTDCSDTGGFIIIDRLTNVTVGAGMIRERLTGLQAQATSVSSFEVELNALIRKHFPHWEAKDIGHLFHAVRSDENS
SIO_010081: VCA1004_RS01480
subclass of: SO_0000673
so part of: VCA1004_RS01480
location: 296790..298241
location: region:296790-298241:1
so has part: feature:296790-298241:1:exon

WP_086982086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296790-298241:1:exon

VCA1004_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01485
so part of: sequence
location: 298269..299993
location: region:298269-299993:1
so has part: feature:298269-299993:1:exon
subclass of: SO_0000010

position:298269:1
position: 298269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299993:1
position: 299993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298269-299993:1:exon

VCA1004_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004410374.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SLC13 family permease
translation: MLEKWLVLLLLVAIIGALIFTKIKPSFIFATTALMAFMTGAVDLDGLAKNFTNASLLTLVLLILASCALEKTRLISWISRHISSGRLGTAVAKLGLSTAFLSSFTNNTAVVVSLIGAIKRNQSHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVVDAGLPSLGFFAPTCIGLAILLIGVMVLIPLSYLLPHSETHEQDDLPYFLEAKVERGSPLIGKSIAQNNLRALRKLFLAEVVRNGVTIPSVTPDLLLLENDRLLFCGDVESVATLQEIPGITLYGQHHLNGQSFIEVVVSQSSSICDKTLKSSQFRERFDAVVVAIRRGHERLEGGLGSIALAAGDTLVLVPGKGFQSARQAHNKEFVLINDLDSSAKLDRSKSAMVLLGFAAIISLSLLGVIPIIKGLAGYLVVMLFIGAVGIGELRRRFPIDIVMIVGSALCLAQLMMSSGLSQEIGNGFIHLFHGSGPLGALIATYLLTLLLTELITNNAAAALAFPLGYSMAVGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVYSVGNYRVKDFIKIGLPISLVYSAVTLTLIPYFFPF
SIO_010081: VCA1004_RS01485
subclass of: SO_0000673
so part of: VCA1004_RS01485
location: 298269..299993
location: region:298269-299993:1
so has part: feature:298269-299993:1:exon

WP_086984594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298269-299993:1:exon

VCA1004_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: cysC
locus tag: VCA1004_RS01490
so part of: sequence
location: 300037..300648
location: region:300037-300648:1
so has part: feature:300037-300648:1:exon
subclass of: SO_0000010

position:300037:1
position: 300037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300648:1
position: 300648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300037-300648:1:exon

VCA1004_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: cysC
locus tag: VCA1004_RS01490
EC number: 2.7.1.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026362.1
GO function: GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO process: GO:0006790 - sulfur compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylyl-sulfate kinase
translation: MTELTKDENVIWHQHQVTKQTRAELKNQKPVVLWFTGLSGAGKSTVAGALESKLAQLGYHTYLLDGDNVRHGLCRDLGFSAQDRRENIRRIGELAKLMADAGLIVLSAFISPHRAERQMVRELLPEGEFIEVFVNAPLAVCEQRDPKGLYKKARAGEIANFTGIDSDYEAPQQPEIDLLAGEHSLDELVAQCLQALRERAVIA
SIO_010081: VCA1004_RS01490
subclass of: SO_0000673
so part of: VCA1004_RS01490
location: 300037..300648
location: region:300037-300648:1
so has part: feature:300037-300648:1:exon

WP_086982087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300037-300648:1:exon

VCA1004_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01495
so part of: sequence
location: complement(300717..301172)
location: region:300717-301172:-1
so has part: feature:300717-301172:-1:exon
subclass of: SO_0000010

position:300717:-1
position: 300717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301172:-1
position: 301172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300717-301172:-1:exon

VCA1004_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017055351.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3299 domain-containing protein
translation: MLAHAQNDKQPLKLDWLDLVPIDEQKNFDKLGMPAPGGHEGGAAKQNLIGNTRPELNKSYVKIPGFVIPLEGDENTITEFLLVPYFGACIHVPPPPPNQIIYVKFPKGAPVQQLWDVVYVIGTLETQTLDHELAQTGYTLEGDAIEEYDDL
SIO_010081: VCA1004_RS01495
subclass of: SO_0000673
so part of: VCA1004_RS01495
location: complement(300717..301172)
location: region:300717-301172:-1
so has part: feature:300717-301172:-1:exon

WP_086984595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300717-301172:-1:exon

VCA1004_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01500
so part of: sequence
location: complement(301256..302515)
location: region:301256-302515:-1
so has part: feature:301256-302515:-1:exon
subclass of: SO_0000010

position:301256:-1
position: 301256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302515:-1
position: 302515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301256-302515:-1:exon

VCA1004_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000864656.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSAIISLAWKSLLNRKTTALLTIFTVAISVLLLLGVEKIRTQAKSSFANTISNTDLIVGARSGDINLLLYSVFRIGNATNNIDWTSYQAIRKLPQVKWAIPISLGDSHRGFRVMGTNQDYFKFYHYGSKQPLTFAYGHEFKGLFDVVLGSDVAKKLHYQLGDDLIIAHGISDKAFTRHNNLPFTVVGILAPTGTPVDKTVHVSLEAIEAIHIGWESGAHLGHTPSQEQLKQTQFEPKQITAFLLGLNSKIQTFMLQRQINNYPKEPLSAILPGIALSELWGMMSVAEQALMVISAFVVVAGLLGMLTGLLTSLQERRREMAILRAMGAQPKHIFFLLMSEASLLTLLGISFGVALLYMVLASSAPIIEQQYGIKIALSTLTHHDLTLLLLVQASGVLIGLFPSFKAYRHSIIDGMTIKV
SIO_010081: VCA1004_RS01500
subclass of: SO_0000673
so part of: VCA1004_RS01500
location: complement(301256..302515)
location: region:301256-302515:-1
so has part: feature:301256-302515:-1:exon

WP_086982088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301256-302515:-1:exon

VCA1004_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01505
so part of: sequence
location: complement(302512..303240)
location: region:302512-303240:-1
so has part: feature:302512-303240:-1:exon
subclass of: SO_0000010

position:302512:-1
position: 302512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303240:-1
position: 303240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302512-303240:-1:exon

VCA1004_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006742969.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MTLHSEAVRLDQVQFAWPKSPHLVIDIEQLTVKTNQHVFIKGPSGSGKSTLLSLLTGMMTPQTGEIHLLGHNLGQLTQAQRDQFRSHHIGYIFQQFNLLPYLSVIENVLLPCRFSHLRQRQTTHNHHTAEQQAEQLLHRLQLPADCFQRSVNQLSIGQQQRVAAARALIGQPELIIADEPTSSLDADNRQVFIELLLEEANQSGATVLFVSHDASLQRYFERCIDLTDINRVNPFTSAEKLS
SIO_010081: VCA1004_RS01505
subclass of: SO_0000673
so part of: VCA1004_RS01505
location: complement(302512..303240)
location: region:302512-303240:-1
so has part: feature:302512-303240:-1:exon

WP_164520859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302512-303240:-1:exon

VCA1004_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01510
so part of: sequence
location: complement(303527..304132)
location: region:303527-304132:-1
so has part: feature:303527-304132:-1:exon
subclass of: SO_0000010

position:303527:-1
position: 303527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304132:-1
position: 304132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303527-304132:-1:exon

VCA1004_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2796 domain-containing protein
translation: MDTRILALSTLSLSLLNTPAFAESSNEFIQHQAHVHGMVNFSIVQDAQDILIEVQAPGMDILGFEHSPQTESEKLSYQQAKVTLADGVKMFQLPAAAHCQLVSAVVDSSISADESTDHEHDHDHDHDHDHDHDHDHDHDHEDHGSFNIQYQYQCSDISKLSQLTTLWFQQFPNTQSIEVNLLTDQAQKHLELKQPNATIRW
SIO_010081: VCA1004_RS01510
subclass of: SO_0000673
so part of: VCA1004_RS01510
location: complement(303527..304132)
location: region:303527-304132:-1
so has part: feature:303527-304132:-1:exon

WP_126000515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303527-304132:-1:exon

VCA1004_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01515
so part of: sequence
location: complement(304358..304909)
location: region:304358-304909:-1
so has part: feature:304358-304909:-1:exon
subclass of: SO_0000010

position:304358:-1
position: 304358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304909:-1
position: 304909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304358-304909:-1:exon

VCA1004_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YtfJ family protein
translation: MIKNLSLALALSMFTLLAHANNIKVGSSVPAVSVDKGGEIFIQDKNVNYLPWNTELMLGKVRVIHAIAGRSGAKAMNKPLMDAITNAHFPQDQYQTTSIINQDDSIWGTSAFVKSSAEDGKEEFPWSSMVLDQEGVVAKQWQLTEKSSTIIVQDKTGRVLFNQEGALTEPQIEQVLQLIQQNL
SIO_010081: VCA1004_RS01515
subclass of: SO_0000673
so part of: VCA1004_RS01515
location: complement(304358..304909)
location: region:304358-304909:-1
so has part: feature:304358-304909:-1:exon

WP_086982091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304358-304909:-1:exon

VCA1004_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01520
so part of: sequence
location: 305250..305456
location: region:305250-305456:1
so has part: feature:305250-305456:1:exon
subclass of: SO_0000010

position:305250:1
position: 305250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305456:1
position: 305456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305250-305456:1:exon

VCA1004_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1107 family protein
translation: MQPIFNRYRPLQIARFVKVVFKGHFGIKGVGEFHFDQGKVLLPDVSNKKQLQIMKEVNLAIAQLSMES
SIO_010081: VCA1004_RS01520
subclass of: SO_0000673
so part of: VCA1004_RS01520
location: 305250..305456
location: region:305250-305456:1
so has part: feature:305250-305456:1:exon

WP_164520861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305250-305456:1:exon

VCA1004_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: msrA
locus tag: VCA1004_RS01525
so part of: sequence
location: complement(305611..306255)
location: region:305611-306255:-1
so has part: feature:305611-306255:-1:exon
subclass of: SO_0000010

position:305611:-1
position: 305611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306255:-1
position: 306255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305611-306255:-1:exon

VCA1004_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: msrA
locus tag: VCA1004_RS01525
EC number: 1.8.4.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009707815.1
GO function: GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO process: GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide-methionine (S)-S-oxide reductase MsrA
translation: MSNKDKLVTQESALLGREEKMLITELHYVNQTDLTAAKPHASQEVILGLGCFWGAERVFWQLDGVLSTSVGYSGGWTPNPTYQEVCTGQTGHAEVVRIIFDPKIITLQDLLAVFWEKHDPTQGMRQGNDIGTQYRSVIFTENNEDLVIAQRSLQTYQQALGEALGKTITTEVAMMKDYYLAETYHQQYLAKNPQGYCGIGGTGVCFPPSLTGEA
SIO_010081: VCA1004_RS01525
subclass of: SO_0000673
so part of: VCA1004_RS01525
location: complement(305611..306255)
location: region:305611-306255:-1
so has part: feature:305611-306255:-1:exon

WP_086982093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305611-306255:-1:exon

VCA1004_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01530
so part of: sequence
location: 306457..308193
location: region:306457-308193:1
so has part: feature:306457-308193:1:exon
subclass of: SO_0000010

position:306457:1
position: 306457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308193:1
position: 308193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306457-308193:1:exon

VCA1004_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005523175.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autotransporter assembly complex family protein
translation: MKKSFATSLFSGLLFFSAGPSYAETDLSIEGLDGELEDNVSAYLSSIKESEYSTSLRFQSRIKENITDALKALGYYNPSLQFTIEGDTNDPDGDRELIVTVDAGIPSIIYESDIIIEGEAATDKDFMNLVDRSQLNLGRVINHGHYESFKSALRNLALQKGYFDGRFESSVLEVSPSRNQAFVKIHYQSGQRYHFGATSIVGSQIEEARVQSLVPYQAGDPYQSILVGELNQNLSSSEWFSSISVEPEIENEDQDKSLPMTVRLSPQTRNQIETGLGYSTDVGPRGKLSWKKPWLNQYGHSVGASLMLSDPEKTITANYKIPLEDVLRNYYLVQYGFKDENDNDTDSQEQNLSFERHWLYDKGWHRTIYLRLLYEDYIQASESGHSLYVLPGVTFSRVRSRGSTMPMWGDKQSINIEYGDPALLSDTRLIRLVGHTGWIRGIGRNHRFLTRLDAGGSFADDWSEVPPSLRFFVGGINSLRGYGYEEISPKDDDGELEGGAYMATSSIEYQYRVTGNWWGAAFLDVGDSWTDTPDWKRGVGLGIRWASPVGPVRLDFAYGLDADEGDEFKIHFTLGPEL
SIO_010081: VCA1004_RS01530
subclass of: SO_0000673
so part of: VCA1004_RS01530
location: 306457..308193
location: region:306457-308193:1
so has part: feature:306457-308193:1:exon

WP_086982094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306457-308193:1:exon

VCA1004_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01535
so part of: sequence
location: 308193..311990
location: region:308193-311990:1
so has part: feature:308193-311990:1:exon
subclass of: SO_0000010

position:311990:1
position: 311990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308193-311990:1:exon

VCA1004_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translocation/assembly module TamB domain-containing protein
translation: MKRLLKWLLGIILVIPTTVLVAILLLVVLLFTNVGLQSGLWVVQKLVPQLTIESTQGSVLPAFSLHNVSYQDPDLGVNAQLKHLDFSTSINCLFKQSICIDTVSVDGFKLDMPHLPESDAQAVAEDDESSMPAIFVPIPISLTHLKLNDIQVDALGYNIAWQHFSTGLYLQGRTLTLRPTQWQSIRLSLPEEDSSARQPEPHNNIPLAQQPDIQLPTISLPIGLRVEQFDVRDFVLQQASPLTVNHLGFQGRAVGSQIKLSNLQLDMPQVDLKLDSEVTLSGQYPLELNATAAVKMQDYSGQTIQLKASGSAADLQLNSQLNGGIEADINAHIQPLKATLPFNLSLRNAQAQWPFKGDSQYQIAIEYLEGKGSLEQYHFELESQLSGQDIPQTEVGLAAQGNLQQMDFEKLSIDTLGGNLSGQAMINWAEPLNWKATLGLTNIQPGLQWPEAEGVLNGSLINTGRLTSQGGWRVNFPSLAIEGQLRNYPLLLQGRLSASDLNGKGQYRVKTPGLKLSHANNALKIKGKLDQDWDMNIAVNLAKLSDTIPNLAGQISGDLQLTGQQNAPSIVADLTANAIDWQQGEARLRSLSLQGQVAPLPAPSGNIRLIAEDGFYQENQLKNLNVNFQGDQQSHTLTLDALTDLIATQWSIQGGVTSPDKKPEWQGQLQSARITILEPNTPAQNDPVWQINHPVQIHYGVASQQADIQAHCWQNLPAKICLDKDLSAGDSGEASVSIQQFPFMGLKAFLPPETRLEGQLNADAWFKWANNMPPQLTLNVDIPAGKVTQKLDTPLAIPWDKISLSAVLQHNKLDMNWLLALTANGQIEGQASIANVSAQTMSIDGSNSIKGIHLGFLRPILGQQNDLNAQINSQLSFKGPILHPQVQGNFDIDGIQAEGQMFPVDVHQGDVKTQFNGYSARLTSLLNTADGDLHLQGEANWAQISQWNANLRVFGDELKAEVPPMVMLKVKPDLTISLTPQVAKITGNIDIPWGRILVEDLPESAISVSKDEVLLDHDLEPVEQDTGLPMAIESDVMIHIGDDVSLSAFGLKGNLEGSLKVSQKDRGPFILGEIRIEKGYYQSFGQDLIIQEGKILMNGPADQPYLAIKAVRNPDNTEDDVIAGIQVTGPADAPEVTIFSEPAMSQTNALSYLLRGRGVEDGSTGSAMTTALIGLSLAKSGRLVGQLGEAFGVQDLQLGTSGSGDDSQVTVSGYIAPGLQVKYGVGIFNALGEFTVRYELLKDFYVEAVTGVDSAVDFLYQFSFH
SIO_010081: VCA1004_RS01535
subclass of: SO_0000673
so part of: VCA1004_RS01535
location: 308193..311990
location: region:308193-311990:1
so has part: feature:308193-311990:1:exon

WP_086982095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308193-311990:1:exon

VCA1004_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01540
so part of: sequence
location: 312111..312461
location: region:312111-312461:1
so has part: feature:312111-312461:1:exon
subclass of: SO_0000010

position:312111:1
position: 312111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312461:1
position: 312461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312111-312461:1:exon

VCA1004_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020429075.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gamma-glutamylcyclotransferase
translation: MSAQVFVYGTLRQGQSNAFLLAQSQFLGRYITEKHFHLFDLGEYPAAIKGDELLVGEVYRVDDATLARLDLLEDYPHEYDRQLIDTPYGPAWIYLYQDPRSLKRRIFTGDWCQTQN
SIO_010081: VCA1004_RS01540
subclass of: SO_0000673
so part of: VCA1004_RS01540
location: 312111..312461
location: region:312111-312461:1
so has part: feature:312111-312461:1:exon

WP_086982096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312111-312461:1:exon

VCA1004_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01545
so part of: sequence
location: 312737..313093
location: region:312737-313093:1
so has part: feature:312737-313093:1:exon
subclass of: SO_0000010

position:312737:1
position: 312737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313093:1
position: 313093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312737-313093:1:exon

VCA1004_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006880456.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2799 domain-containing protein
translation: MRINIVLLTLLLSVGCVSQQGLPDTANTQDWQAYGEQMAAKGFVEHSQEQLAKQSTLLTDSAYQAYQQGYEKGLKQFCSQNASWLGATGQPYRGTCDNLDPFFREDYMSGLESQSAGK
SIO_010081: VCA1004_RS01545
subclass of: SO_0000673
so part of: VCA1004_RS01545
location: 312737..313093
location: region:312737-313093:1
so has part: feature:312737-313093:1:exon

WP_086982097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312737-313093:1:exon

VCA1004_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ppa
locus tag: VCA1004_RS01550
so part of: sequence
location: complement(313299..313826)
location: region:313299-313826:-1
so has part: feature:313299-313826:-1:exon
subclass of: SO_0000010

position:313299:-1
position: 313299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313826:-1
position: 313826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313299-313826:-1:exon

VCA1004_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ppa
locus tag: VCA1004_RS01550
EC number: 3.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004405515.1
GO function: GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO process: GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic diphosphatase
translation: MSLNNVPAGKSLPDDLYVVIEIPANADPIKYEVDKDSGAVFVDRFMSAPMFYPCNYGYVNHTLSLDGDPVDVLVPTPFPLMPGSVIRCRPVGVLKMTDESGEDAKVIAVPHSKLSKEYDHIQDINDVPELLKSQITHFFERYKDLEPGKWVKVDGWEDVAAARKEILESYERAQK
SIO_010081: VCA1004_RS01550
subclass of: SO_0000673
so part of: VCA1004_RS01550
location: complement(313299..313826)
location: region:313299-313826:-1
so has part: feature:313299-313826:-1:exon

WP_086982098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313299-313826:-1:exon

VCA1004_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fbp
locus tag: VCA1004_RS01555
so part of: sequence
location: complement(314127..315140)
location: region:314127-315140:-1
so has part: feature:314127-315140:-1:exon
subclass of: SO_0000010

position:314127:-1
position: 314127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315140:-1
position: 315140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314127-315140:-1:exon

VCA1004_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fbp
locus tag: VCA1004_RS01555
EC number: 3.1.3.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019277282.1
GO function: GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class 1 fructose-bisphosphatase
translation: MSTMRTLGEFVVENQHHFPHASGELSSLLGSIKLAAKIVNREINKAGLVDITGSVGAENVQGEEQQKLDLYANEKFKAALEARDQVCGVASEEEDEAVAFNKDLNKNAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVSPIGSAPTQEDFLQPGHKQVAAGYIIYGSSTMLVYTTGNGVHGFTYDPSLGVFCLSHERMTIPKTGTIYSINEGNYIRFPLGIKKYIKFCQENVPEDNRPYTSRYIGSLVADFHRNLLKGGVYLYPSTESHPNGKLRLLYECNPIAFLMEQAGGKATDGKDRILDIKPTELHQRVPFVVGSPLMVDQVESFLEQYPEE
SIO_010081: VCA1004_RS01555
subclass of: SO_0000673
so part of: VCA1004_RS01555
location: complement(314127..315140)
location: region:314127-315140:-1
so has part: feature:314127-315140:-1:exon

WP_086982099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314127-315140:-1:exon

VCA1004_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: mpl
locus tag: VCA1004_RS01560
so part of: sequence
location: 315464..316825
location: region:315464-316825:1
so has part: feature:315464-316825:1:exon
subclass of: SO_0000010

position:315464:1
position: 315464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316825:1
position: 316825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315464-316825:1:exon

VCA1004_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: mpl
locus tag: VCA1004_RS01560
EC number: 6.3.2.45
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017420344.1
GO function: GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
translation: MHIHILGICGTFMGGAAVLARQLGHKVTGCDANVYPPMSTLLESQGIEIIEGFDPSQLDPAPDLVVIGNAMSRGNPCVEYALNHNLKYTSGPQWLQEFLLHDRWVLAVSGTHGKTTTASMLAWILEDCGYAPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHPRTLVMNNLEFDHADIFDDLEAIKRQFHHLVRTVPGNGRILVPTNDEDLKDVIQRGCWSELEYIGDDGHWKAEKIQKDGSHFKVYLDGQLQAEVQWDLVGEHNVNNALMAIAAARHVGVTPDLACEALGKFINTKRRLELKGEVGGIKVYDDFAHHPTAINLTLEGLRNKVGDSKIIAVFEPRSSTMKMGVHKQTLAAAFQHADEVCLYQPNNIKWKVQEVADQCPQPSYVDDNMEHFVAHIVARAQSGDQILVMSNGGFEGIHAKLLQALEQKSS
SIO_010081: VCA1004_RS01560
subclass of: SO_0000673
so part of: VCA1004_RS01560
location: 315464..316825
location: region:315464-316825:1
so has part: feature:315464-316825:1:exon

WP_086982100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315464-316825:1:exon

VCA1004_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01565
so part of: sequence
location: 316961..317587
location: region:316961-317587:1
so has part: feature:316961-317587:1:exon
subclass of: SO_0000010

position:316961:1
position: 316961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317587:1
position: 317587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316961-317587:1:exon

VCA1004_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01565
EC number: 2.5.1.129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006713638.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavin prenyltransferase UbiX
translation: MTPTTDKRITLAFTGASGAPYGLRLLECLLAADYTVYLLISSAARVVMATEHDLKLPSGPEAAQQALVKHLNCATEKLVVCGKEDWFSPVASGSAAPKKMVVCPCSAGSVASIAHGMSDNLIERAADVVLKERGQLLLVVRETPFSTLHLENMHKLSQMGVTIMPAAPGFYHQPKTIDDLIDFMVARILDHLGIEQGLVPRWGYDQRN
SIO_010081: VCA1004_RS01565
subclass of: SO_0000673
so part of: VCA1004_RS01565
location: 316961..317587
location: region:316961-317587:1
so has part: feature:316961-317587:1:exon

WP_086982101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316961-317587:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1891186
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00059
inference: COORDINATES: profile:INFERNAL:1.1.1
note: TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: thiamine pyrophosphate
so part of: sequence
location: 317678..317773
location: region:317678-317773:1
so has part: feature:317678-317773:1:region

position:317678:1
position: 317678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317773:1
position: 317773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317678-317773:1:region

VCA1004_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: thiB
locus tag: VCA1004_RS01570
so part of: sequence
location: 317885..318832
location: region:317885-318832:1
so has part: feature:317885-318832:1:exon
subclass of: SO_0000010

position:317885:1
position: 317885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318832:1
position: 318832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317885-318832:1:exon

VCA1004_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: thiB
locus tag: VCA1004_RS01570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011217202.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0048502 - ABC-type thiamine transporter activity [Evidence IEA]; GO:0030975 - thiamine binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO process: GO:0030974 - thiamine pyrophosphate transmembrane transport [Evidence IEA]; GO:0015888 - thiamine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine ABC transporter substrate binding subunit
translation: MPAMAEQSPVLTVYTYDSFTSDWGPGPKIKTAFESQCGCELNFVALDDGGSVLSRIRMEGKNTQADIVLGLNNNIMAQAQATGLLAKHQVDTSKVVIPGGWNSPYFVPFDYGYFAFVYDKTKMKNPPKSLKELVERDDFTIIYQDPRTSITGQGLLLWMKDVYGNDAAKAWQQLAKKTVTVSKGWSDSYPMFLKGESDMVLSYNTSPAYHIIAENNPNYAAATFSEGQYAQIELAAKLKSSKHQKLADEFMQFILSDDFQSVMATGNWMYPVTDVPLPKGYEQLTMPKAMLSLDPDVVAKQLKSWTREWQMALTQ
SIO_010081: VCA1004_RS01570
subclass of: SO_0000673
so part of: VCA1004_RS01570
location: 317885..318832
location: region:317885-318832:1
so has part: feature:317885-318832:1:exon

WP_232012631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317885-318832:1:exon

VCA1004_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: thiP
locus tag: VCA1004_RS01575
so part of: sequence
location: 318897..320486
location: region:318897-320486:1
so has part: feature:318897-320486:1:exon
subclass of: SO_0000010

position:318897:1
position: 318897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320486:1
position: 320486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318897-320486:1:exon

VCA1004_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: thiP
locus tag: VCA1004_RS01575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026345.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0015888 - thiamine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine/thiamine pyrophosphate ABC transporter permease ThiP
translation: MVKVAVPKFGIVIALTIGLFVLSTVAALIQHAPTLNVGWIVSDPYLRHITFFSFYQAAFSMLLSVGLAIPVAHALSRRHFFGKSLLLKLFASTLVLPVLVGVFGLVAILGNSGLIAQLFQSLGSRLPFSIYGLNGILIAHVFFNLPYASRLLLHALDSIPNEQHKLCAHLGMQGWDKFRQVEWPRMKQQLPHIAGLVFMLCFTSFSTVMVLGGGPKSTTIELAIYQAIKFDFDLQTGAILALWQMLLCGSLSLLLLKLTRTLPASNSAHHQGYRYFIDSRAAKVWDGFWIIAAMFLVLPPLMMVVIQGLNPHSFVVLQQGKFWQAFSASLQIAMLASTLALVFGVAILLTSRAWILKGQQHRASQIELMGTIILVTPGIVISTGLFLLLREQVDVFSLAFWVVIAINSLMGLPYIIKTLNQPMLQTAQQYHYLCQSLGMSGWSRFRLVEWRALNKPIAHAFAICFMFSMGDLSAIALFGSQSLTTLPLYLFQLLGSYQMDAAAMVALCLLIFSVLCFTLIERVFKRGSQ
SIO_010081: VCA1004_RS01575
subclass of: SO_0000673
so part of: VCA1004_RS01575
location: 318897..320486
location: region:318897-320486:1
so has part: feature:318897-320486:1:exon

WP_086982103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318897-320486:1:exon

VCA1004_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: thiQ
locus tag: VCA1004_RS01580
so part of: sequence
location: 320486..321229
location: region:320486-321229:1
so has part: feature:320486-321229:1:exon
subclass of: SO_0000010

position:321229:1
position: 321229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320486-321229:1:exon

VCA1004_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: thiQ
locus tag: VCA1004_RS01580
EC number: 7.6.2.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006713635.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0048502 - ABC-type thiamine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0030974 - thiamine pyrophosphate transmembrane transport [Evidence IEA]; GO:0015888 - thiamine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine ABC transporter ATP-binding protein
translation: MKQPLKPHSVAIALRQVRYEYQNESFEFELQLPTGAIMALMGASGSGKSTLLSLLAGFIEPHSGCILINGYNVVGTAPHLRPIAMLFQEHNLFTHLTVRQNIGLGLHPGLKLTSQQQQQIQEAAQQVGIEDLLDRLPEQLSGGQKQRVALARCFVQSHAIWLLDEPFSALDPILREEMLQLVAKLAKQRQITVLMVTHHVSDAKMIATHFAFMQQGQVSEVGEIERLSLSHHNQGFTAFLTAGGLEA
SIO_010081: VCA1004_RS01580
subclass of: SO_0000673
so part of: VCA1004_RS01580
location: 320486..321229
location: region:320486-321229:1
so has part: feature:320486-321229:1:exon

WP_086982104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320486-321229:1:exon

VCA1004_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01585
so part of: sequence
location: complement(321338..321967)
location: region:321338-321967:-1
so has part: feature:321338-321967:-1:exon
subclass of: SO_0000010

position:321338:-1
position: 321338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321967:-1
position: 321967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321338-321967:-1:exon

VCA1004_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNDKNITIIKRAILRFLILALLVALPVLCIRIDIFYFDNHLGELSLTELLQESMLLIATCLFALIAKHQPETRHAYLLVTGFFACLFIRELDAFFDLIYHGFWIIPALLVALSAIGYAAKQPQKTIQGLCEHVQNKNSTSMMVGLAILLVFSRLFGMGSLWEGILGDDFVRTVKNIAEEGTEVLGYVMMFYSALCYYIDSKRSLASQK
SIO_010081: VCA1004_RS01585
subclass of: SO_0000673
so part of: VCA1004_RS01585
location: complement(321338..321967)
location: region:321338-321967:-1
so has part: feature:321338-321967:-1:exon

WP_086982105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321338-321967:-1:exon

VCA1004_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01590
so part of: sequence
location: complement(322364..323779)
location: region:322364-323779:-1
so has part: feature:322364-323779:-1:exon
subclass of: SO_0000010

position:322364:-1
position: 322364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323779:-1
position: 323779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322364-323779:-1:exon

VCA1004_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010434391.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PhoH family protein
translation: MGANEKTLTSRTSQDKLSRKIFVLDTNILLHEPHAIYSFQEHDVVIPMTVLEELDRIKDSKRDVARDARVAIRALEAIFHDATPEEISQGIPFGYEHQTSGTLSILADYDVQETDKAFADKAGDNRILNGVLSLQNRRSPREVVLITKDINMRLRAKGAGVKFVEDYRTDQLIDDVQYLTKGFTEYQGSFWDNFQQVESHTSGSKTFHLVDREGLEPTFINQYLIDQDTDFAGRVEELHPTNAKIRDLSRERLLHRHAWDVYPKNIYQGMAMDALLDPSIDLVILTGAAGSGKTMLAMAAALEMTIEKKMFDKIIVTRNTPDIGEAIGFLPGTEEEKMMPWLAAITDTLEALHKNDHCTEGSLKYICDKANIQFKSINFMRGRSIQNAFVLLDECQNLTASQIKTIITRCGEGTKIVCSGNLAQIDSTYLTPVTSGLTYIVERFKNFEGSANIHLNGVVRSRLAEFAEENL
SIO_010081: VCA1004_RS01590
subclass of: SO_0000673
so part of: VCA1004_RS01590
location: complement(322364..323779)
location: region:322364-323779:-1
so has part: feature:322364-323779:-1:exon

WP_086982106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322364-323779:-1:exon

VCA1004_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rapA
locus tag: VCA1004_RS01595
so part of: sequence
location: 324310..327234
location: region:324310-327234:1
so has part: feature:324310-327234:1:exon
subclass of: SO_0000010

position:324310:1
position: 324310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327234:1
position: 327234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324310-327234:1:exon

VCA1004_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rapA
locus tag: VCA1004_RS01595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009385858.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]; GO:0016817 - hydrolase activity, acting on acid anhydrides [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase-associated protein RapA
translation: MAFALGQRWISDTESDLGLGTVVGLDARTVTLMFAASEENRLYARNDAPITRVIFNVGDVIESQEGWTLKVEHVDVQENVLTYIGTRQDTQQSDVALREIFLNHQIRFNKPQDKLFAGQIDRMDNFVLRYNALTNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVGLGKTIEAGMIIHQQVLTGRAERILIVVPETLQHQWLVEMMRRFNLHFSVFDEERCLEAKADALNPFDTQQYVLCSLDFLKKHEKRYHQAVAADWDLLVVDEAHHLEWSVDAPSREYQMIEGLAAKIAGVLLLTATPEQLGHESHFARLRLLDSDRFFDYQTFVKEEQQYAPVAEAVASLESGKPLTNDEKNSITELLSEQDAEPLFRILDGCSSQAEFDLEQKTLARQELIDNLMDRHGTGRILFRNTRAAIQGFPQRHVHLLDMPMPEQYSRAMRVSKMMDGDLPEQAQALKNLYPEEILQDLEGDKSSWWNFDPRVSWLIEKVLAKRAEKILVIASRATTALQLEQALREREGIRATVFHEGMSILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQSRDIDIFVPYLQDSAQATLAHWYHHGLNAFAETCPTGRSVYDQYSAELITMLANDDHSQLEQLVEHSAALNKQLKSKLEQGRDRLLEIHSNGGEKAQKITETIANGDNDTNLVTFALGLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFMSWEHPMIQGGIDLLLSENVGTNAVSLLKNKALPVGTMFLELVYLVDAQAPKRSGINQFLPKTPIRLLLDGKGNELSEQVPFDTFNRQLSPINRHMASKVASSVQDQIHGLIEKAEQAVLPKLDEVRQTAKLEMQQKLNLELERLLALKAVNPNIRDEEIVAIESQIETLSGYIETAQLQLDSLRLIVVAHQ
SIO_010081: VCA1004_RS01595
subclass of: SO_0000673
so part of: VCA1004_RS01595
location: 324310..327234
location: region:324310-327234:1
so has part: feature:324310-327234:1:exon

WP_086982107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324310-327234:1:exon

VCA1004_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rluA
locus tag: VCA1004_RS01600
so part of: sequence
location: 327406..328143
location: region:327406-328143:1
so has part: feature:327406-328143:1:exon
subclass of: SO_0000010

position:327406:1
position: 327406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328143:1
position: 328143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327406-328143:1:exon

VCA1004_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rluA
locus tag: VCA1004_RS01600
EC number: 5.4.99.28
EC number: 5.4.99.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011261089.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA
translation: MALLEYLPPTEPWIDIVYQDEHILVANKPAGLLSVPGRLAEHYDSMWSRLREAYPEIEVVHRLDMATSGLMLFALTKEAERHIKKQFQYRLTHKIYYARVWGNVEQDQGEIDLPLICDWPNRPRQKVCHQDGKPSLTRYQVVAREGQTTVVRLLPITGRSHQLRVHMLALGHPIVGDEFYATPDALAYSQRLQLHSAELSFYHPSNNQLSTSFVACDFYPTVTAQILQHFDPEVELPDYKTLISS
SIO_010081: VCA1004_RS01600
subclass of: SO_0000673
so part of: VCA1004_RS01600
location: 327406..328143
location: region:327406-328143:1
so has part: feature:327406-328143:1:exon

WP_086982108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327406-328143:1:exon

VCA1004_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01605
so part of: sequence
location: 328178..329194
location: region:328178-329194:1
so has part: feature:328178-329194:1:exon
subclass of: SO_0000010

position:328178:1
position: 328178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329194:1
position: 329194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328178-329194:1:exon

VCA1004_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026341.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-2-hydroxyacid dehydrogenase
translation: MSTSSQFVAPAPIHPKPLTSKLTVVFLDHATIPEHIVLPNLTFEHQWQQYDFTSPEQVVERIAGADIVITNKVSLTAELLAQAPNLKLIAVSATGTNNVDLDYCREHKIAVTNVQGYATRSVPEHVLAMMFALKRNLVGYHQDIAAGVWQKDKQFCFFTHPITDIAGSTIGIIGSGSLGQAVAVLAKALGMKVVFAERKGVSPCRLGYMEFQRVIESADVLTLHCPLTPQTKNLIAEPELSAMKSSAIVINVGRGGLVNEADLVAALKAKQIAGAGCDVFTQEPADESNPLLANQDLPNLLLTPHVAWGSDSSIQALCHILMDNIEKFQQGIEQNRVV
SIO_010081: VCA1004_RS01605
subclass of: SO_0000673
so part of: VCA1004_RS01605
location: 328178..329194
location: region:328178-329194:1
so has part: feature:328178-329194:1:exon

WP_086982109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328178-329194:1:exon

VCA1004_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01610
so part of: sequence
location: complement(329214..330215)
location: region:329214-330215:-1
so has part: feature:329214-330215:-1:exon
subclass of: SO_0000010

position:329214:-1
position: 329214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330215:-1
position: 330215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329214-330215:-1:exon

VCA1004_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009355179.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TAXI family TRAP transporter solute-binding subunit
translation: MTVRSLLTRYFLKSVAIPLMLVANLQSGMAAESLLPKTYITIATGSVTGVYYPAGSSICKLINKGRTQHNIRCSIEATAGSVENIDNVRLGRNDLGISQADWQYFAHQGNPAFLPKTPYTNMRALFSLYSEPFNLVVRQDANINSVADLAEKRVNIGNPGSGDRATMNMIMNQFGWSKQSFSLTTEFTVASRAQALCDNQIDAFISILGNPNASIKEATTSCQAQLIPIAGPKIEQLVKTTPYYTPTVIPANLYPNNDQDINTFSVLSVVFSDSRMSDEVAYQITKSVFENFDTFKRLHPVFSKLQKQQMIHNGISVPLHPGAIRYYKEVGLM
SIO_010081: VCA1004_RS01610
subclass of: SO_0000673
so part of: VCA1004_RS01610
location: complement(329214..330215)
location: region:329214-330215:-1
so has part: feature:329214-330215:-1:exon

WP_232012605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329214-330215:-1:exon

VCA1004_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: argR
locus tag: VCA1004_RS01615
so part of: sequence
location: complement(330430..330900)
location: region:330430-330900:-1
so has part: feature:330430-330900:-1:exon
subclass of: SO_0000010

position:330430:-1
position: 330430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330900:-1
position: 330900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330430-330900:-1:exon

VCA1004_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: argR
locus tag: VCA1004_RS01615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078752.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator ArgR
translation: MKNNDKQDNLIRSFKALLKEECFGSQGEIVDALREEGFENINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTASSSLRELVLDVGHNDALVVIHTGPGAAQLIARLLDSLGKSEGILGVVAGDDTIFITPTLTITTKQLYDSVCDLFEYAG
SIO_010081: VCA1004_RS01615
subclass of: SO_0000673
so part of: VCA1004_RS01615
location: complement(330430..330900)
location: region:330430-330900:-1
so has part: feature:330430-330900:-1:exon

WP_086982110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330430-330900:-1:exon

VCA1004_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: mdh
locus tag: VCA1004_RS01620
so part of: sequence
location: 331184..332119
location: region:331184-332119:1
so has part: feature:331184-332119:1:exon
subclass of: SO_0000010

position:331184:1
position: 331184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332119:1
position: 332119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331184-332119:1:exon

VCA1004_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: mdh
locus tag: VCA1004_RS01620
EC number: 1.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012126909.1
GO function: GO:0030060 - L-malate dehydrogenase activity [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malate dehydrogenase
translation: MKVAVIGAAGGIGQALALLLKNGLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYAGEDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIIKSLAEKIAHTCPSACVGIITNPVNTTVPIAAEVLKKAGVYDKRRLFGITTLDVIRSETFVSELKGVPLKGLEVPVIGGHSGVTILPLLSQVKGVEFSDDELAALTKRIQNAGTEVVEAKAGGGSATLSMGQAAYRFGLSLVKALNGEQGIVECAYVEGDGEHARFFAQPIRLGKSGIEEILSFGELSAFEQHAFDSMLDTLKADIALGEEFAK
SIO_010081: VCA1004_RS01620
subclass of: SO_0000673
so part of: VCA1004_RS01620
location: 331184..332119
location: region:331184-332119:1
so has part: feature:331184-332119:1:exon

WP_086982111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331184-332119:1:exon

VCA1004_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ispB
locus tag: VCA1004_RS01625
so part of: sequence
location: complement(332209..333180)
location: region:332209-333180:-1
so has part: feature:332209-333180:-1:exon
subclass of: SO_0000010

position:332209:-1
position: 332209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333180:-1
position: 333180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332209-333180:-1:exon

VCA1004_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ispB
locus tag: VCA1004_RS01625
EC number: 2.5.1.90
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000345930.1
GO process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: octaprenyl diphosphate synthase
translation: MDFKAIQALTADDMVKVNETIHAQLNSEVSLINQLGFYIVSGGGKRMRPLLALLSAKALGYQGQDHITAAAFVEFIHTATLLHDDVVDESDMRRGKETANAAFGNAASVLVGDYIYTRSFQMMTSLGSLKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEDSYMQVIYSKTARLFEAATQIGALLVDAPQEVETALQNYGKFLGTAFQLIDDVMDYTSDGKEMGKNVGDDLAEGKPTLPLLYAMRNGTPEQAVMIREAIEHSNGMEKLDAIMQAMHETGSLEYTTLRAEQEADKAIAELAIIPDSQYKEALIALAHMAVRRKK
SIO_010081: VCA1004_RS01625
subclass of: SO_0000673
so part of: VCA1004_RS01625
location: complement(332209..333180)
location: region:332209-333180:-1
so has part: feature:332209-333180:-1:exon

WP_086982112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332209-333180:-1:exon

VCA1004_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplU
locus tag: VCA1004_RS01630
so part of: sequence
location: 333454..333765
location: region:333454-333765:1
so has part: feature:333454-333765:1:exon
subclass of: SO_0000010

position:333454:1
position: 333454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333765:1
position: 333765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333454-333765:1:exon

VCA1004_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplU
locus tag: VCA1004_RS01630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L21
translation: MYAVFQSGGKQHRVSEGQTIRLEKLDVETGASVEFDSVLMVANGEEITVGAPLVAGGKVTAEVVKHGRGDKVKIVKFRRRKHSRKQMGHRQWFTEVKITGISA
SIO_010081: VCA1004_RS01630
subclass of: SO_0000673
so part of: VCA1004_RS01630
location: 333454..333765
location: region:333454-333765:1
so has part: feature:333454-333765:1:exon

WP_086982113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333454-333765:1:exon

VCA1004_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpmA
locus tag: VCA1004_RS01635
so part of: sequence
location: 333787..334044
location: region:333787-334044:1
so has part: feature:333787-334044:1:exon
subclass of: SO_0000010

position:333787:1
position: 333787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334044:1
position: 334044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333787-334044:1:exon

VCA1004_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpmA
locus tag: VCA1004_RS01635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L27
translation: MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALAEGKVKFEVKGPKNRKFVSIEAE
SIO_010081: VCA1004_RS01635
subclass of: SO_0000673
so part of: VCA1004_RS01635
location: 333787..334044
location: region:333787-334044:1
so has part: feature:333787-334044:1:exon

WP_086982114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333787-334044:1:exon

VCA1004_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: cgtA
locus tag: VCA1004_RS01640
so part of: sequence
location: 334249..335418
location: region:334249-335418:1
so has part: feature:334249-335418:1:exon
subclass of: SO_0000010

position:334249:1
position: 334249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335418:1
position: 335418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334249-335418:1:exon

VCA1004_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: cgtA
locus tag: VCA1004_RS01640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009847831.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Obg family GTPase CgtA
translation: MKFVDESVIKVEAGDGGNGVVSFWREKFVAKGGPDGGDGGDGGDVYMEADENLNTLIDYRFERFHKAERGENGRGGNCTGKRGKDKTIKVPVGTRAVDIHTNEVVGEVTEHGKKIMIAKGGWHGLGNQRFKSSVNRAPRQKTMGTPGEVRELRLELLLLADVGMLGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVRAGSERSFVIADIPGLIEGAADGAGLGIRFLKHLERCRVLLHMIDLQPIDGSDPIENALTIIDELEQYSDKVAAKPRWLIFNKVDLMTEEEADEKIQEIIEALGWEGHYAKISAANKLGTQQLCYDLADFMEDLPREVEETQEEEKVDFKWDDYHKDAMSGKDVVTEDWDDDDWDDDEDDGHVIYVRD
SIO_010081: VCA1004_RS01640
subclass of: SO_0000673
so part of: VCA1004_RS01640
location: 334249..335418
location: region:334249-335418:1
so has part: feature:334249-335418:1:exon

WP_086982115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334249-335418:1:exon

VCA1004_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01645
so part of: sequence
location: 335552..336319
location: region:335552-336319:1
so has part: feature:335552-336319:1:exon
subclass of: SO_0000010

position:335552:1
position: 335552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336319:1
position: 336319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335552-336319:1:exon

VCA1004_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026333.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine/serine exporter family protein
translation: MEEKQRVISRLIVQTGQMLLAHGAESTLVGDLTRRIGLACGMSEVEVSLSASSIIVTTVMNDHCITTARRSPDRGINMKVVTDIQRICIMLERKVIDYRLAQDKLNKIQPTRYNRWLVLVMIGLSCAAFARLAGGDIAICFVTFISSCVGMFVRQEIGHRNFNPLLNFAVTAFVTTLISSQAVIYQIGNSPFTAMASSVLMLVPGFPLINSVADMLKGYINMGIARFVMASLLTFATSLGIVAAMTLTGTWEWIQ
SIO_010081: VCA1004_RS01645
subclass of: SO_0000673
so part of: VCA1004_RS01645
location: 335552..336319
location: region:335552-336319:1
so has part: feature:335552-336319:1:exon

WP_086982116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335552-336319:1:exon

VCA1004_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01650
so part of: sequence
location: 336301..336783
location: region:336301-336783:1
so has part: feature:336301-336783:1:exon
subclass of: SO_0000010

position:336301:1
position: 336301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336783:1
position: 336783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336301-336783:1:exon

VCA1004_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017100845.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine/serine exporter family protein
translation: MGVDPMIEFMVDVAMDMALAAIPAIGFALVFNVPFNALKYCALGGAIAHGLRFIMMSYSIPIEWATFFAATIVGMIGVLWSHRFLAHPKVFTVAAMIPMVPGVYAFKAMIALVEMKQSGYDPQLVAMLMDNFLQAMFIIAGLAIGLAMPGLLFYRRRSVV
SIO_010081: VCA1004_RS01650
subclass of: SO_0000673
so part of: VCA1004_RS01650
location: 336301..336783
location: region:336301-336783:1
so has part: feature:336301-336783:1:exon

WP_086982117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336301-336783:1:exon

VCA1004_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: folA
locus tag: VCA1004_RS01655
so part of: sequence
location: 336818..337300
location: region:336818-337300:1
so has part: feature:336818-337300:1:exon
subclass of: SO_0000010

position:336818:1
position: 336818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337300:1
position: 337300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336818-337300:1:exon

VCA1004_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: folA
locus tag: VCA1004_RS01655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445610.1
GO function: GO:0004146 - dihydrofolate reductase activity [Evidence IEA]
GO process: GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 3 dihydrofolate reductase
translation: MKISMIAAMANNRIIGKDNQMPWHLPADFAWFKQCTMGKPILMGRKTYESIGRPLPGRLNIVLSRDADLSIDGVTTVNSLEQAQQAAGNVEELMIIGGGSIYHTYLAMADTLYLTHIEADIDGDTQFPEWGEDWQLTHQSSYAKDQKNAYDMRFMILQRA
SIO_010081: VCA1004_RS01655
subclass of: SO_0000673
so part of: VCA1004_RS01655
location: 336818..337300
location: region:336818-337300:1
so has part: feature:336818-337300:1:exon

WP_179949572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336818-337300:1:exon

VCA1004_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01660
so part of: sequence
location: complement(337439..338263)
location: region:337439-338263:-1
so has part: feature:337439-338263:-1:exon
subclass of: SO_0000010

position:337439:-1
position: 337439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338263:-1
position: 338263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337439-338263:-1:exon

VCA1004_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01660
EC number: 3.6.1.41
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013857837.1
GO function: GO:0008803 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: symmetrical bis(5'-nucleosyl)-tetraphosphatase
translation: MSTYIVGDIQGCLDELQLLLKKVAFNPQQDTLWVAGDLVARGDKSLETLRFIKELGDSARCVLGNHDLHLLAVHLGYFPAKPKDKTSNILSAPDRESLIEWLRQQPLLAEHDQFVMCHAGIAPVWDLATARQANQEITAILQSSDWPWLIKNMYANQPTQWQAQLQGIERYRFIINAFTRMRFCDQQGQLDMACKLPPATNQDPNLLPWFKVKHRIPLNKTVIFGHWAALMGCHDEEANVIGLDTGCVWGEHLSMLRWEDKSLFTQDSLLNQSC
SIO_010081: VCA1004_RS01660
subclass of: SO_0000673
so part of: VCA1004_RS01660
location: complement(337439..338263)
location: region:337439-338263:-1
so has part: feature:337439-338263:-1:exon

WP_086982118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337439-338263:-1:exon

VCA1004_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: apaG
locus tag: VCA1004_RS01665
so part of: sequence
location: complement(338273..338662)
location: region:338273-338662:-1
so has part: feature:338273-338662:-1:exon
subclass of: SO_0000010

position:338273:-1
position: 338273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338662:-1
position: 338662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338273-338662:-1:exon

VCA1004_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: apaG
locus tag: VCA1004_RS01665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017029039.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Co2+/Mg2+ efflux protein ApaG
translation: MVVNQKTSPSITCQVHTRYIEEQSQPEKSRYIFAYTITIRNLSPHSIQLMSRRWLITDANGKQLTIEGEGVVGEQPVIGSMQEYTYTSGTALETPVGVMQGHYVMLNENSDEFITDIPPFRLAIPNILN
SIO_010081: VCA1004_RS01665
subclass of: SO_0000673
so part of: VCA1004_RS01665
location: complement(338273..338662)
location: region:338273-338662:-1
so has part: feature:338273-338662:-1:exon

WP_086982119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338273-338662:-1:exon

VCA1004_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rsmA
locus tag: VCA1004_RS01670
so part of: sequence
location: complement(338730..339536)
location: region:338730-339536:-1
so has part: feature:338730-339536:-1:exon
subclass of: SO_0000010

position:338730:-1
position: 338730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339536:-1
position: 339536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338730-339536:-1:exon

VCA1004_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rsmA
locus tag: VCA1004_RS01670
EC number: 2.1.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005476881.1
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MSNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPLPGQNLVEIGPGLGAITEPVGREVDKFTVIELDRDLAQRLRTHPELADKLTIHEGDAMRFDFNELVKPNNKLRIFGNLPYNISTPLMFHLFEFHKDIQDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVMPVLEVPPTAFVPPPKVDSAVVRLTPYEVLPYPTTSLKWLDRVCREGFNQRRKTVRNCFKNLVTAEELEQLKITPSLRPENLTLVQFVDLANYLHAKEQ
SIO_010081: VCA1004_RS01670
subclass of: SO_0000673
so part of: VCA1004_RS01670
location: complement(338730..339536)
location: region:338730-339536:-1
so has part: feature:338730-339536:-1:exon

WP_086982120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338730-339536:-1:exon

VCA1004_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pdxA
locus tag: VCA1004_RS01675
so part of: sequence
location: complement(339547..340563)
location: region:339547-340563:-1
so has part: feature:339547-340563:-1:exon
subclass of: SO_0000010

position:339547:-1
position: 339547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340563:-1
position: 340563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339547-340563:-1:exon

VCA1004_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pdxA
locus tag: VCA1004_RS01675
EC number: 1.1.1.262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016800602.1
GO function: GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO process: GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA
translation: MPKFNTTKRLIITAGEPAGIGPDLVIALSQYQWPHQLVVCADKSMLAERAKQLNIEVKLLDYDAQTPPQAQHKGQLYVEHIATNAPVVPGLLNEANGHYVLNTLERACQGCINGEFDALVTGPVHKGVINRAGVAFSGHTEFFAEKSNTPLVVMMLATEGLRVALVTTHIPLAYVSQAVTEERLESIIRILHNDLVLKFGIDNPAIYVCGLNPHAGEDGCLGREEIDTITPTLERLKQQDGYNLVGPLPADTIFNEKYLQKADTVLAMYHDQGLPVLKYKGFGNSVNITLGLPFIRTSVDHGTALDLAGTGNADIGSFLTAITHALQLAETSKQPESK
SIO_010081: VCA1004_RS01675
subclass of: SO_0000673
so part of: VCA1004_RS01675
location: complement(339547..340563)
location: region:339547-340563:-1
so has part: feature:339547-340563:-1:exon

WP_086984598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339547-340563:-1:exon

VCA1004_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: surA
locus tag: VCA1004_RS01680
so part of: sequence
location: complement(340556..341851)
location: region:340556-341851:-1
so has part: feature:340556-341851:-1:exon
subclass of: SO_0000010

position:340556:-1
position: 340556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341851:-1
position: 341851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340556-341851:-1:exon

VCA1004_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: surA
locus tag: VCA1004_RS01680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002046342.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0042277 - peptide binding [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]; GO:0060274 - maintenance of stationary phase [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0050821 - protein stabilization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase SurA
translation: MKTWIPALIGIMSLFTVSTSIAAPQPLDHVVAIVNNGVILQTDVDTALKTVQANAQDKNQSLPDSDTLKDQILEKLVIDEIQLQEAKRMGIQIDDQRLDQAIEGIAHDNKQTLDEMRSSLQQHGITYPVFREQIRKEMAISEARNAQVRRRVNISPSEVETLASMLAEQTTQNVEYKISQIQLRFGDDKDATEQEAQDLIKRLHNGEDFATLAYTYSKGPKALQGGDWGWMRKEEMPTIFADQLTTQGKGAIIGPFRSGIGFHIMKIDDVKGLQTVAVTEVNAQHILIKPSIILSDEGAKNELNEFIQEIKSGKRTFGELAQQYSQDTGSAVNNGILGFQTPDSYVPEFKHQVETLPVGQISQPFKTVHGWHIVKVLDRRTVDRTESAMKNRAYQILFKRKFNEEAAAWIQEIRASAYVEMLDQQEQDDDA
SIO_010081: VCA1004_RS01680
subclass of: SO_0000673
so part of: VCA1004_RS01680
location: complement(340556..341851)
location: region:340556-341851:-1
so has part: feature:340556-341851:-1:exon

WP_086982121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340556-341851:-1:exon

VCA1004_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: lptD
locus tag: VCA1004_RS01685
so part of: sequence
location: complement(341924..344251)
location: region:341924-344251:-1
so has part: feature:341924-344251:-1:exon
subclass of: SO_0000010

position:341924:-1
position: 341924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344251:-1
position: 344251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341924-344251:-1:exon

VCA1004_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: lptD
locus tag: VCA1004_RS01685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026325.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO process: GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]; GO:0015920 - lipopolysaccharide transport [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS assembly protein LptD
translation: MLPVSRTFLATLISAAFLPTAFADESSQDSVPEIIPVDQCIAPEKNSSDPEQETVKVEADSIHTEGQNQAVYQGDVIITQGPKKITADQVTINQRDNSIVADGNVTMNDGQIKSNSNKVKSDLKGERVELHDTQYKLLCQPARGEAAYILKDGQSIYTMEDGTLTTCPEGNKSWRVKATDIDIDNNEEEATFYNTRFEILDVPVFYWPYITVPIGDKRKTGFLYPSGGYDTKNGLEINVPIYFNLAPQYDLTTTLNYMQERGLQFDNDFRYLTDGFGSGDINFEYLHQDDLYKEKGARWGINFTHDGIYQRHWKFTADYSRVSDIDYFTDLDSSIGNREDGQLLQSGEVSYRTDYSDTTLKVRDFQVLSSSQPYRLMPQLQYQYNRANVLPHIDVEWNSHVSRFETDDDDLPDATRVHLEPGVVIPFYAPWGQLTTEAKLMYTYYQQDLKDGSATTQTNSSGDSVTLSKTADRTVPEYRISGSLFLDNSQKWLGGYTQTLEPKMQYLYIPRVNQDDIYQGYDTTLLQNDYYGLFRDTQYSSIDYIASANQFSYGATSRFYDENYKERFNLSLGQIYYINPGDDEVNLSAWALENEWNISDEWLFKGGVQYDSNVSSLQIANSTIEYKLPGGGYTQLNYRYVSKDYILDNASGLTESSLNSYTRDGISQAGFLTSFNVAKRWDVRASYFHDLTENQMLESLLGVTYNDDCWFLGLTFTRHIINSGNVSDIYPEPGGEYESKVSLNIGIKGLGQSTGLSTSDGGNALSYGRPFALAD
SIO_010081: VCA1004_RS01685
subclass of: SO_0000673
so part of: VCA1004_RS01685
location: complement(341924..344251)
location: region:341924-344251:-1
so has part: feature:341924-344251:-1:exon

WP_086982122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341924-344251:-1:exon

VCA1004_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: djlA
locus tag: VCA1004_RS01690
so part of: sequence
location: 344444..345286
location: region:344444-345286:1
so has part: feature:344444-345286:1:exon
subclass of: SO_0000010

position:344444:1
position: 344444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345286:1
position: 345286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344444-345286:1:exon

VCA1004_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: djlA
locus tag: VCA1004_RS01690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026324.1
GO function: GO:0051087 - chaperone binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone DjlA
translation: MLGKLLGILFGSMIGNIPGAIIGCFIGHQFDKARRSQQGFQSAFGSGPSQAERQTDFFQAAYAVMGHVAKAKGQVTKEEIQLATVMMDRMNLTGEQKRIAQEAFRQGKEAHFPLEETLRRVRFSAGRRRDLLQFFLELQISAAFADGSLHPSEVNVLQTVAAELGFTAQYLQQRLRMQEAAFRFQQGGGFGGYQHQGQQSGGQWQQGPTRSQLDDAYELLGVDKTADAKTIKRAHRKLMNEHHPDKLVAKGLPPEMMEVAKQKAQEIQSAYDLIKKDKGF
SIO_010081: VCA1004_RS01690
subclass of: SO_0000673
so part of: VCA1004_RS01690
location: 344444..345286
location: region:344444-345286:1
so has part: feature:344444-345286:1:exon

WP_086982123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344444-345286:1:exon

VCA1004_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01695
so part of: sequence
location: complement(345416..346201)
location: region:345416-346201:-1
so has part: feature:345416-346201:-1:exon
subclass of: SO_0000010

position:345416:-1
position: 345416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346201:-1
position: 346201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345416-346201:-1:exon

VCA1004_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013572465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF547 domain-containing protein
translation: MKHCLALLFMCLAFPALSAPKAERWDYWDVNQPQSQQIVDHSTWQALLDRYLITQDQNTLFLYSQVSSSDKQRLHDYLSNLTTQDPRQLNQAQQFAYWVNLYNALTVNLILEHYPITSITKLGGLFSFGPWDQDITTINGKALTLNDIEHRILRPIWQDKRIHYAVNCASLGCPNLLPTAFTATNTEQLLTQAESAFVHSLKGVAVKGSKLQLSSIYEWYAADFGGEAGVLSYLETLRPEIGDTNKKPSYRYNWDLNSIKY
SIO_010081: VCA1004_RS01695
subclass of: SO_0000673
so part of: VCA1004_RS01695
location: complement(345416..346201)
location: region:345416-346201:-1
so has part: feature:345416-346201:-1:exon

WP_086982124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345416-346201:-1:exon

VCA1004_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: leuD
locus tag: VCA1004_RS01700
so part of: sequence
location: complement(346440..347060)
location: region:346440-347060:-1
so has part: feature:346440-347060:-1:exon
subclass of: SO_0000010

position:346440:-1
position: 346440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347060:-1
position: 347060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346440-347060:-1:exon

VCA1004_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: leuD
locus tag: VCA1004_RS01700
EC number: 4.2.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012549201.1
GO component: GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO function: GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase small subunit
translation: MSQASTQTGFQQHTGLVVPLDIANIDTDAIIPKQFLQKVTRLGFGQHLFHDWRFLDDAGTQPNPEFVMNAPRYQGSSILLARENFGCGSSREHAPWALADYGIQVMIAPSFADIFYGNSINNQMVPVRLTEQQVDEIFQFVEATEGAQITVDLEAMTVSANGKQYSFEIDEFRRHCLLNGLDNIGLTLQHESKIAEYEANIPAFLR
SIO_010081: VCA1004_RS01700
subclass of: SO_0000673
so part of: VCA1004_RS01700
location: complement(346440..347060)
location: region:346440-347060:-1
so has part: feature:346440-347060:-1:exon

WP_086982125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346440-347060:-1:exon

VCA1004_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: leuC
locus tag: VCA1004_RS01705
so part of: sequence
location: complement(347071..348507)
location: region:347071-348507:-1
so has part: feature:347071-348507:-1:exon
subclass of: SO_0000010

position:347071:-1
position: 347071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348507:-1
position: 348507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347071-348507:-1:exon

VCA1004_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: leuC
locus tag: VCA1004_RS01705
EC number: 4.2.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008989817.1
GO component: GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO function: GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase large subunit
translation: MSNSTPKTLYEKVYDAHVVVAAQGENPILYIDRHLVHEVTSPQAFDGLREKGRKVRQVSKTFATMDHNVSTTTKDINASGEMARIQMQTLMKNCLDFGVTLYDLNHKYQGIVHVMGPELGITLPGMTIVCGDSHTATHGAFGSLAFGIGTSEVEHVLATQTLKQARAKTMKIEVKGKVAEGITAKDIVLAIIGKTTAAGGTGYVVEFCGEAITDLSMEGRMTVCNMAIELGAKAGLIAPDQTTFDYIKDKKFSPKGADFDAAVEYWKTLKSDDDAQFDAVVTLDAAEIKPQVTWGTNPGQVMSVDGIIPNPQDFTDPVEKASAEKALAYMGLEAGKKLSDYTVDKVFVGSCTNSRIEDMRAAAAVAKGRKVAANVQALIVPGSEQVKAQAEQEGLDKIFIDAGFEWRLPGCSMCLAMNNDRLGPKERCASTSNRNFEGRQGRDGRTHLVSPAMAAAAAIAGHFVDIRSLDSVQQINKQ
SIO_010081: VCA1004_RS01705
subclass of: SO_0000673
so part of: VCA1004_RS01705
location: complement(347071..348507)
location: region:347071-348507:-1
so has part: feature:347071-348507:-1:exon

WP_086982126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347071-348507:-1:exon

VCA1004_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: leuB
locus tag: VCA1004_RS01710
so part of: sequence
location: complement(348527..349615)
location: region:348527-349615:-1
so has part: feature:348527-349615:-1:exon
subclass of: SO_0000010

position:348527:-1
position: 348527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349615:-1
position: 349615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348527-349615:-1:exon

VCA1004_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: leuB
locus tag: VCA1004_RS01710
EC number: 1.1.1.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006074849.1
GO function: GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydrogenase
translation: MSATYKIAVLPGDGIGPEVMQQAQKVLDAIEQKHAISFERQQFDVGGIAIDNHGCPLPETTVKGCEEADAVLFGSVGGPKWEHLPPNDQPERGALLPLRKHFQLFCNLRPAQIHAGLESFSPLRADISDRGFDIVVVRELTGGIYFGQPKGREGSGPDEKAFDTEIYHRYEIERIAKIAFESARLRNKKVCSVDKANVLQSSILWREVVEEIAKDYPDVELSHIYIDNATMQLIKDPSQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESKFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEEAAQSIEQAVSKALAAGELTADLAGNQPALSTSEMGDKIAHYILNS
SIO_010081: VCA1004_RS01710
subclass of: SO_0000673
so part of: VCA1004_RS01710
location: complement(348527..349615)
location: region:348527-349615:-1
so has part: feature:348527-349615:-1:exon

WP_086982127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348527-349615:-1:exon

VCA1004_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: leuA
locus tag: VCA1004_RS01715
so part of: sequence
location: complement(349835..351385)
location: region:349835-351385:-1
so has part: feature:349835-351385:-1:exon
subclass of: SO_0000010

position:349835:-1
position: 349835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351385:-1
position: 351385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349835-351385:-1:exon

VCA1004_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: leuA
locus tag: VCA1004_RS01715
EC number: 2.3.3.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001064848.1
GO function: GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO process: GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-isopropylmalate synthase
translation: MNDQVIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPISSPGDFKSVKTIAQHIKGSRICALSRAVEKDIDVAAEALKTAEAFRIHTFISTSTIHVQDKLRRSYDDVVEMAINAVKRARKYTDDVEFSCEDAGRTPIDNLCRIVEAAINAGATTVNIPDTVGYTLPNEFGGIIQTLFNRVPNIDKAVISVHCHDDLGMSVANSMAAVQAGARQVEGTINGIGERAGNCALEEIAMIIRTRGEFLGVNTGLKYDEIHRTSKLVSQLCNMPIQSNKAIVGANAFSHSSGIHQDGMLKNKNTYEIMTPESIGLKNQALNLTSRSGRAAVKSHMDSMGYKDSDYNLDTLYEDFLKLADRKGQVFDYDLESLMHFANLREEDDFFKLNYLSVQSGSVMATTSIKLQCGAEEKCEAAVGNGPVDALYQCIYRLTGYEIVLDKFDLTAKGEGEDGLGQADIIANYKGRKYHGTGLATDIVEASGQALLHVINSIHRADQIAEIKQSKRMETV
SIO_010081: VCA1004_RS01715
subclass of: SO_0000673
so part of: VCA1004_RS01715
location: complement(349835..351385)
location: region:349835-351385:-1
so has part: feature:349835-351385:-1:exon

WP_086982128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349835-351385:-1:exon

VCA1004_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01720
so part of: sequence
location: 351828..352355
location: region:351828-352355:1
so has part: feature:351828-352355:1:exon
subclass of: SO_0000010

position:351828:1
position: 351828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352355:1
position: 352355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351828-352355:1:exon

VCA1004_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026318.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatase PAP2 family protein
translation: MKTMQPIARFDLAFSLLCLQHRFNLPVARVSKAVSHTGDGHLYAVIGLLSWWFEPRAGQAFLMVGLLAFLIELPIYWLVKNSFKRRRPAQISHLLTSYITPSDQYSLPSGHTAAAFLMAVLMDHFYPDLGVACFAWAGLIGFSRILLGVHFLTDIVLGALLGVSCALSAIYLMAG
SIO_010081: VCA1004_RS01720
subclass of: SO_0000673
so part of: VCA1004_RS01720
location: 351828..352355
location: region:351828-352355:1
so has part: feature:351828-352355:1:exon

WP_086982129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351828-352355:1:exon

VCA1004_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01725
so part of: sequence
location: 352362..353417
location: region:352362-353417:1
so has part: feature:352362-353417:1:exon
subclass of: SO_0000010

position:352362:1
position: 352362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353417:1
position: 353417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352362-353417:1:exon

VCA1004_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017026317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family protein
translation: MKILYGVQGTGNGHIARARAMACAFKQRDDIKVDFLFSGRDEKGYFSMDDFGQYQTRRGLTFSTEKGKVSHLKTAINTNPSHLWKEISDMDLSGYDVVINDFEPITAWAAKKQNVPTIGISHQNAFQYSVPKKGATWIDQTLIQHFAPTQHRLGLHWYHFQQPILPPIVHTNKHHRISEDDFILVYLPFEDWQEVKQLLLRFSSHKFICYHPEIKERLQQENITFMPLSYANFQADLHACHGVMANGGFELPSEALTLGKKLLLKPLNGQFEQMSNVATLEALGLAQSMAWLDPSAVRDWLNEQAAEPVVYPDVAAHLARWVTQGDWHNIAPLWSELWEQVDFPPYVLINE
SIO_010081: VCA1004_RS01725
subclass of: SO_0000673
so part of: VCA1004_RS01725
location: 352362..353417
location: region:352362-353417:1
so has part: feature:352362-353417:1:exon

WP_086982130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352362-353417:1:exon

VCA1004_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: leuO
locus tag: VCA1004_RS01730
so part of: sequence
location: 353689..354654
location: region:353689-354654:1
so has part: feature:353689-354654:1:exon
subclass of: SO_0000010

position:353689:1
position: 353689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354654:1
position: 354654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353689-354654:1:exon

VCA1004_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: leuO
locus tag: VCA1004_RS01730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020432370.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator LeuO
translation: MALPIEQQNPAVNLRSESTLRGVDLNLLTVFDAVMQEQNITRAAQYLGMSQPAVSNAVARLKVMFNDELFMRHGRGIQPTQRARQLFGPLRQALQLVRNELPNSIFVPETSDRVFKLAVCSPCDLRFAPHIMRGIAEKSPSIQLNLDAEFDHQLPEKLRYQEVDFVIDYARFEQAGYSSTEIFSDELVVVVAANHPRIGDHISQQEFMSEKHATLSKVNGIRSFYERVYGSDLECQESYQGTSLSNILYVVGQSELVTVVPRWLVEAIPNPTHYKVLDYPFSDNKVSGYLTWHDSSEKDKGHIWMRDQLMLICGEALAAKR
SIO_010081: VCA1004_RS01730
subclass of: SO_0000673
so part of: VCA1004_RS01730
location: 353689..354654
location: region:353689-354654:1
so has part: feature:353689-354654:1:exon

WP_086982131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353689-354654:1:exon

VCA1004_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01735
so part of: sequence
location: 355135..356853
location: region:355135-356853:1
so has part: feature:355135-356853:1:exon
subclass of: SO_0000010

position:355135:1
position: 355135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356853:1
position: 356853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355135-356853:1:exon

VCA1004_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001888108.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase 3 large subunit
translation: MEMLSGADMIVRSLIDEGVDHIFGYPGGSVLDIYDALHEKSDIEHVLVRHEQAAVHMADGYARATGKVGVVLVTSGPGATNAITGIATAYMDSAPMVVLSGQVPSSLIGNDAFQECDMVGISRPVVKHSFLVTKAEDIPSTIKKAFYLASTGRPGPVVVDLPKNVLNPLENYPYSYPEEVKMRSYNPTTSGHKGQIKKGLKTLLAAKKPVLYVGGGAIIAEASEQLIKLAEALSLPVVSTLMGLGAFPATHKNSLGMLGMHGTYEANMAMHNADLIFGVGVRFDDRTTNNVEKYCPNAKIMHIDIDPSSISKTIHADLPIVGSADEVLNSMLKQLEDHGIEQDSEALATWWQELQSWKNRNCLAYDKTSDRIKPQQVVETLYKLTKGEAYVASDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAAMGVKFAMPQEEVVCITGDGSIQMNIQELSTCMQYDIPVKIINLNNRFLGMVKQWQDMIYQGRHSHSYMDSVPDFAAIAEAYGHVGIRINHPDELESGLQKALAMKDRVVFVDINVDETEHVYPMQIKGEGMDKMWLSKTERT
SIO_010081: VCA1004_RS01735
subclass of: SO_0000673
so part of: VCA1004_RS01735
location: 355135..356853
location: region:355135-356853:1
so has part: feature:355135-356853:1:exon

WP_086982132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355135-356853:1:exon

VCA1004_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ilvN
locus tag: VCA1004_RS01740
so part of: sequence
location: 356855..357349
location: region:356855-357349:1
so has part: feature:356855-357349:1:exon
subclass of: SO_0000010

position:356855:1
position: 356855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357349:1
position: 357349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356855-357349:1:exon

VCA1004_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ilvN
locus tag: VCA1004_RS01740
EC number: 2.2.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001961753.1
GO function: GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase small subunit
translation: MRHIISLLLENQPGSLSRVVGLFSQRGYNIESLTVSPTDDATLSRINITTATDALQLEQIEKNLHKLVDVLKVQEVTEFDYVERELMLVKVKASGFSRAEVHRLADVFRGQIVDVTASLFTIQLAGDTAKLDAFIKAVSEMTDVIEVARSGVVGIARGERALKA
SIO_010081: VCA1004_RS01740
subclass of: SO_0000673
so part of: VCA1004_RS01740
location: 356855..357349
location: region:356855-357349:1
so has part: feature:356855-357349:1:exon

WP_086982133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356855-357349:1:exon

VCA1004_RS15325
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS15325
so part of: sequence
location: 357539..357670
location: region:357539-357670:1
so has part: feature:357539-357670:1:exon
subclass of: SO_0000010

position:357539:1
position: 357539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357670:1
position: 357670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357539-357670:1:exon

VCA1004_RS15325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS15325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000931888.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNVVVVRVTIASLLVLAINISALYFLLLVLLLNTHHQEFFGW
SIO_010081: VCA1004_RS15325
subclass of: SO_0000673
so part of: VCA1004_RS15325
location: 357539..357670
location: region:357539-357670:1
so has part: feature:357539-357670:1:exon

WP_086982134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357539-357670:1:exon

VCA1004_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pykF
locus tag: VCA1004_RS01745
so part of: sequence
location: complement(357867..359279)
location: region:357867-359279:-1
so has part: feature:357867-359279:-1:exon
subclass of: SO_0000010

position:357867:-1
position: 357867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359279:-1
position: 359279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357867-359279:-1:exon

VCA1004_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pykF
locus tag: VCA1004_RS01745
EC number: 2.7.1.40
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008989806.1
GO function: GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate kinase PykF
translation: MKKTKIVCTIGPKTESVEKLTELANAGMNVMRLNFSHGDFEEHGNRIANLRQVMKNTGKQLAILLDTKGPEIRTIKLENGEDVALVAGQDFTFTTDTTVVGNKNTVAVTYPGFAQDLKAGDTILVDDGLIEMEVVATTDTEVQCKVLNNGDLGENKGVNLPGVSVKLPALAEKDKADLKFGCEQGVDFVAASFIRKAEDVKEIRELLCANGGENIQIISKIENQEGVDNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVANAIMDGTDAVMLSGESAKGKYPVEAVTIMAQICARTDKALKAELGSRLDSPRLRITEAVCKSAVETAEKLAAPVIVVATEAGKSARSVRKYFPTARIIAVTTNAKTAAQLCLSKGVTPIVVESINDTEDFYRQGMALALETGYGEKGDVTVMVSGALVPSGTTNTSSVHVL
SIO_010081: VCA1004_RS01745
subclass of: SO_0000673
so part of: VCA1004_RS01745
location: complement(357867..359279)
location: region:357867-359279:-1
so has part: feature:357867-359279:-1:exon

WP_086982135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357867-359279:-1:exon

VCA1004_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01750
so part of: sequence
location: 359682..360446
location: region:359682-360446:1
so has part: feature:359682-360446:1:exon
subclass of: SO_0000010

position:359682:1
position: 359682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360446:1
position: 360446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359682-360446:1:exon

VCA1004_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004740792.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DeoR family transcriptional regulator
translation: MSKRNTQQRRHLIVQQINEHGEVSVEALTKQFDISEVSIRKDLSALEASGLLLRRYGGAVALPKEILNEEFSEEVSKRKLGLAKAAATLIKDHHRIIIDSGSTTGALIEQLNQKRGLVVMTNSLNVANALNALESEPTLLMTGGTWDTHSESFQGQVAEQVLRSYDFDQLFIGADGIDLERGTTTFNELLGLSQVMSEVARRVVVMVESDKIGRKIPNLELSWDKIDVLVTDSGISLEQQAQIEQHHVQVVISK
SIO_010081: VCA1004_RS01750
subclass of: SO_0000673
so part of: VCA1004_RS01750
location: 359682..360446
location: region:359682-360446:1
so has part: feature:359682-360446:1:exon

WP_086982136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359682-360446:1:exon

VCA1004_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: glmS
locus tag: VCA1004_RS01755
so part of: sequence
location: 360567..362399
location: region:360567-362399:1
so has part: feature:360567-362399:1:exon
subclass of: SO_0000010

position:360567:1
position: 360567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362399:1
position: 362399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360567-362399:1:exon

VCA1004_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: glmS
locus tag: VCA1004_RS01755
EC number: 2.6.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019830207.1
GO function: GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine--fructose-6-phosphate transaminase (isomerizing)
translation: MCGIVGAVAQRDIAEILVEGLRRLEYRGYDSAGVAIVDSESNMTRIRRLGKVQELADAVESAHAVGGTGIAHTRWATHGEPSEVNAHPHISGDIAVVHNGIIENYESLRETLRERGYVFESQTDTEVIAHLVEWELRNSESLTEALQKAVQQLEGAYGTVVVDRKDPSRVVVARSGSPIVIGLGVGENFIASDQLALLNVTRRFMYLEEGDVAEVTRRGVTVFDCQGQQVEREIAESNAEHDAGDKGQYRHFMQKEIYEQPTALINTMEARLTKESVITESIGVHAAEILSQVEHVQIIACGTSYNAGMTARYWFESLAGVSCDVEIASEFRYRKFVTRPNSLLITLSQSGETADTLAALRLAKEKGYMAAMTVCNVAGSSLVRESDFAFMTRAGTEIGVASTKAFTTQLSALLMLVTAIGKQQQRIDHAKEAEIVDALHALPTQIQAALAYDKEIEALAEDFADKHHTLFLGRGEFYPIAMEASLKLKEISYIHAEAYAAGELKHGPLALIDADMPVVVVAPNNDLLEKLKSNIEEVRARGGLLYVFADANAGFEGDESMKIINLPSVSEITAPIYYTIPMQLLSYHVALIKGTDVDQPRNLAKAVTVE
SIO_010081: VCA1004_RS01755
subclass of: SO_0000673
so part of: VCA1004_RS01755
location: 360567..362399
location: region:360567-362399:1
so has part: feature:360567-362399:1:exon

WP_086982137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360567-362399:1:exon

VCA1004_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01760
so part of: sequence
location: 362902..363156
location: region:362902-363156:1
so has part: feature:362902-363156:1:exon
subclass of: SO_0000010

position:362902:1
position: 362902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363156:1
position: 363156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362902-363156:1:exon

VCA1004_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012519136.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MRIVSFTEARNSLKAVLDGVVNDADTTVITRRDSEDAVVMSLDYYNSLMETVHLLRSPKNAEHLNRSVAQYRAGKTTARELIDE
SIO_010081: VCA1004_RS01760
subclass of: SO_0000673
so part of: VCA1004_RS01760
location: 362902..363156
location: region:362902-363156:1
so has part: feature:362902-363156:1:exon

WP_086982138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362902-363156:1:exon

VCA1004_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01765
so part of: sequence
location: 363149..363418
location: region:363149-363418:1
so has part: feature:363149-363418:1:exon
subclass of: SO_0000010

position:363149:1
position: 363149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363418:1
position: 363418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363149-363418:1:exon

VCA1004_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005464459.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Txe/YoeB family addiction module toxin
translation: MSSRQRLLSWTDDAWDDYLYWQTQDKKTLKRINKIINDVKRSPFEGIGKPEPLKENLSGFWSRRIDDTNRLVYAVDDEAITIISCRYHY
SIO_010081: VCA1004_RS01765
subclass of: SO_0000673
so part of: VCA1004_RS01765
location: 363149..363418
location: region:363149-363418:1
so has part: feature:363149-363418:1:exon

WP_164520809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363149-363418:1:exon

VCA1004_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01770
so part of: sequence
location: complement(363615..365336)
location: region:363615-365336:-1
so has part: feature:363615-365336:-1:exon
subclass of: SO_0000010

position:363615:-1
position: 363615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365336:-1
position: 365336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363615-365336:-1:exon

VCA1004_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005494616.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 39 protein
translation: MSLLNLRSKKTEQHQDYYSTLFFLLIVATLIIFTGIGWRDPWPADEPRFVEVAREMVQSGQWFFPMRGGELYPDKPPVFMWSMAALYWLTGDLKATFLLPNAIVSLLVLLCCYDISAKLWNVKTARTVGLLLLITPQFIIQAKAAQIDAMVAAWITLAMYGLLRHFFLKSHWLWYCLAWAFMGLGIITKGVGFLPALLLIPVLYLHFSGQHRFENQISWKLLLGPLIMLLVVACWLLPMLMLAESSHNPDFIAYKDNILFKQTGERYANAWGHIQPWWYFLTNVIPMMWFPLYFVWLNRPFWQQLKRSPVILSLLIWVVLLVIFFSISPGKRGVYVLPAVPMMAIIAGWYLSHYSWQRWTDKLLKIASIVIAGLLLIATVMAGSNAPILTKQLGDNLLPYAAFFAGVACLWIIIYWQTRRQSGLITWGSAISLTWVLYSLIGYSLLNPIRTPAKAIMQQVAQDIGLNGELGVTRFKEQFLLFSPISLTHFSYLADKQEQDRNAWLWLKEQPNRYIFTEKTEDMVCFDVNKAKPLGQAHRRKWILLDASAMLSHCQAPQTIKRYHLSISQPYSE
SIO_010081: VCA1004_RS01770
subclass of: SO_0000673
so part of: VCA1004_RS01770
location: complement(363615..365336)
location: region:363615-365336:-1
so has part: feature:363615-365336:-1:exon

WP_086982140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363615-365336:-1:exon

VCA1004_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01775
so part of: sequence
location: complement(365323..366015)
location: region:365323-366015:-1
so has part: feature:365323-366015:-1:exon
subclass of: SO_0000010

position:365323:-1
position: 365323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366015:-1
position: 366015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365323-366015:-1:exon

VCA1004_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024889.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VTT domain-containing protein
translation: MKWLKLVLLIIIGLLLAQQLESPVMAHLTDKNWLLAYVQQHGLQGDLIILLSCVAFLAVSGPKQIIALVLGYIYPLAIALGMALLACLFAAAVNYLAARYLVGQVLFHRFPKRMSQFNQFASHKPFYKILLLRLFPIGNNVVTNLLSGSVRVPAFAFFSASLLGYFPQILIFVLMGAGIQTTSHSMIYLSIALAVISTLLTGYLYQDHLKQRLEMLTIDNANLEKPHELA
SIO_010081: VCA1004_RS01775
subclass of: SO_0000673
so part of: VCA1004_RS01775
location: complement(365323..366015)
location: region:365323-366015:-1
so has part: feature:365323-366015:-1:exon

WP_086982141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365323-366015:-1:exon

VCA1004_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01780
so part of: sequence
location: complement(366019..366765)
location: region:366019-366765:-1
so has part: feature:366019-366765:-1:exon
subclass of: SO_0000010

position:366019:-1
position: 366019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366765:-1
position: 366765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366019-366765:-1:exon

VCA1004_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020430292.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MASISVVIPAKNEQGNIGKLIKEIHSSLQGYPQFEIVITDDGSHDHTAQEAINSAAECGCPLQVIRHAQSCGQSTAVLTAIKHAKGEWIITTDADGQNDPSDMPKMLEAASHQTNPHFCIAGFRAQRQDTAWIRFQSKIANTIRHALLGDGVPDSGCGLKIIPKSTYLQLPYFDHMHRFLPALIKNIGGDIVIHQVRHRDREIGTSNYNAWNRAWVGIIDILGVIWLQKRTQRPTIANIYTSASTQDD
SIO_010081: VCA1004_RS01780
subclass of: SO_0000673
so part of: VCA1004_RS01780
location: complement(366019..366765)
location: region:366019-366765:-1
so has part: feature:366019-366765:-1:exon

WP_164520810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366019-366765:-1:exon

VCA1004_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: zntR
locus tag: VCA1004_RS01785
so part of: sequence
location: complement(367058..367489)
location: region:367058-367489:-1
so has part: feature:367058-367489:-1:exon
subclass of: SO_0000010

position:367058:-1
position: 367058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367489:-1
position: 367489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367058-367489:-1:exon

VCA1004_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: zntR
locus tag: VCA1004_RS01785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024891.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Zn(2+)-responsive transcriptional regulator
translation: MYKIGELAKLCGINNDTLRFYEKSGLLTPSARSESGYRLYNEQDKQALLFILRAKKVGFNLSDIKELLEIEVEKASNSCFDVKQVVDAKLADVEQKLAELQQFQRSLQTLSSACCGGKGSAEQCTILEALESDIEHVKPEKHG
SIO_010081: VCA1004_RS01785
subclass of: SO_0000673
so part of: VCA1004_RS01785
location: complement(367058..367489)
location: region:367058-367489:-1
so has part: feature:367058-367489:-1:exon

WP_086982143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367058-367489:-1:exon

VCA1004_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01790
so part of: sequence
location: 367835..368521
location: region:367835-368521:1
so has part: feature:367835-368521:1:exon
subclass of: SO_0000010

position:367835:1
position: 367835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368521:1
position: 368521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367835-368521:1:exon

VCA1004_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpW family outer membrane protein
translation: MKNMPVMGTVLAMAMAATFSAHAAIEKGDILIRAGAVMVAPNESTDGIQAGGSNLGGDLSVDNNTQLGLNFAYMMTDHVGIELLAATPFSHDVSVKGSPAGLDSLNGSLGSVKHLPPTLSLLYYPLANESKFQPYVGVGVNYTFFFDDSVSSSASSKGFSNLSLDDSWGWAGQVGMDYFITDNITLNAQVRYIDINTDASVDFAPVGKLDVDVDIDPWVYMIGVGYKF
SIO_010081: VCA1004_RS01790
subclass of: SO_0000673
so part of: VCA1004_RS01790
location: 367835..368521
location: region:367835-368521:1
so has part: feature:367835-368521:1:exon

WP_086982144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367835-368521:1:exon

VCA1004_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01795
so part of: sequence
location: complement(368614..369864)
location: region:368614-369864:-1
so has part: feature:368614-369864:-1:exon
subclass of: SO_0000010

position:368614:-1
position: 368614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369864:-1
position: 369864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368614-369864:-1:exon

VCA1004_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01795
EC number: 2.3.1.179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013856473.1
GO function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase
translation: MNRRVVVTGMSGITAFGNDWQHIEPKLRACENAVQFMESYVQYDGLNTKLAAPIVNFELPKHYTRKKTRGMGRVSQMATLASEQALLQSGLLSPDGDKHPILTNGQTGVAYGSSTGSTPAIGAFGVMLNEKSTRAITATTYVQMMPHTSAVNVGLFFGLRGRVIPTSSACTSGSQAIGYAYEAIKHGYQTVMVAGGGEELCPTESAVFDTLFATSLKNDAPKTTPRPYDKDRDGLVIGEGAGTLVLEEYQHAVERGATIYAEIVGFASNCDAAHVTQPQMENMQRCMELALDNANLSPSVIDYISAHGTATDRGDIAESQATENVFGHQTPISSLKSYFGHTLGACGALEAWLSLEMMHSGWFNPTLNLDNIDPECGKLDYIRGHGRELDCQYIMSNNFAFGGINTSIIFKKSADA
SIO_010081: VCA1004_RS01795
subclass of: SO_0000673
so part of: VCA1004_RS01795
location: complement(368614..369864)
location: region:368614-369864:-1
so has part: feature:368614-369864:-1:exon

WP_086982145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368614-369864:-1:exon

VCA1004_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fabG
locus tag: VCA1004_RS01800
so part of: sequence
location: complement(369861..370586)
location: region:369861-370586:-1
so has part: feature:369861-370586:-1:exon
subclass of: SO_0000010

position:369861:-1
position: 369861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370586:-1
position: 370586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369861-370586:-1:exon

VCA1004_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fabG
locus tag: VCA1004_RS01800
EC number: 1.1.1.100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008218191.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-oxoacyl-ACP reductase FabG
translation: MTRHVLVTGASKGIGQAIAIQLAQDGFVVVVHYMSDQQGAHKTIEQIQQLGGQARALQFDISDRQQCQQIIEADIEQHGAYYGVVSNAGITCDTAFPAMMSEEWDKVIHTNLDSFYNVLHPCVMPMVQRRNGGRIITMASVSGIMGNRGQTNYSAAKAGIIGATKALALELAKRKITVNCVAPGLIDTGMVDEHVQQHALPQVPLRRMGQPQEVAGLVGYLMSDNAGYITRQVISVNGGLI
SIO_010081: VCA1004_RS01800
subclass of: SO_0000673
so part of: VCA1004_RS01800
location: complement(369861..370586)
location: region:369861-370586:-1
so has part: feature:369861-370586:-1:exon

WP_086982146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369861-370586:-1:exon

VCA1004_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01805
so part of: sequence
location: complement(370620..371093)
location: region:370620-371093:-1
so has part: feature:370620-371093:-1:exon
subclass of: SO_0000010

position:370620:-1
position: 370620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371093:-1
position: 371093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370620-371093:-1:exon

VCA1004_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hotdog family protein
translation: MTDFSLSPTTPIGELLPHQAPMILIDKLIDISDTKVHTQVLIQADGLFFDAATNTVPGYVGIEYMAQSIAAWSGYHAKQQGKDPDIGFLLGSRRYHSDCAAFSLGQVLDIHAEQLMENNGMAAFYCQIMHQGKEIAHAQLNAFVPSPEQLNDMLAQQ
SIO_010081: VCA1004_RS01805
subclass of: SO_0000673
so part of: VCA1004_RS01805
location: complement(370620..371093)
location: region:370620-371093:-1
so has part: feature:370620-371093:-1:exon

WP_086982147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370620-371093:-1:exon

VCA1004_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01810
so part of: sequence
location: complement(371086..372342)
location: region:371086-372342:-1
so has part: feature:371086-372342:-1:exon
subclass of: SO_0000010

position:371086:-1
position: 371086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372342:-1
position: 372342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371086-372342:-1:exon

VCA1004_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005460594.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-[acyl-carrier-protein] synthase family protein
translation: MSTQTATPLYIHACGSHSALGWTNDMIHQHLQLGSTPHMQRTTEWLNDGSETVVGYANGPLPHLDDTFAHQDTHNNRLALSALLQMDAEIKNAIAHYGAERIAVIVGTSTSGISDGEHALQHWQRTTQLPKQFDYHQQEVANTSRFIAEYYGITGPNYTISTACSSSGRVYLSAQRLLKAGLVDAVIVGGADTLCKLTLNGFYGLEALSHHHCNPFSEKRDGINIGEAAAFMLLSLDKPHVVHPTYKQDASNQPNADYNPNACLALLGAGESSDAYHISAPQPEGIGAERAMRNALTNAGLQADDVGYVNAHGTATKLNDAMEAQAIERVFGSNIPVSSTKPFTGHTLGAASAIEAAICWHVLQYQLPIPAQINDGHCDEFTIALAQPNTKLQRPVILSNSFAFGGNNVSLIFGYPND
SIO_010081: VCA1004_RS01810
subclass of: SO_0000673
so part of: VCA1004_RS01810
location: complement(371086..372342)
location: region:371086-372342:-1
so has part: feature:371086-372342:-1:exon

WP_086982148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371086-372342:-1:exon

VCA1004_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01815
so part of: sequence
location: complement(372363..373103)
location: region:372363-373103:-1
so has part: feature:372363-373103:-1:exon
subclass of: SO_0000010

position:372363:-1
position: 372363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373103:-1
position: 373103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372363-373103:-1:exon

VCA1004_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024897.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3261 domain-containing protein
translation: MRSSLIHSSLIYTSLIRSICRPLIWLLTSVLLFGCAQQTAPIAPEQNTHIKIADNTWVHLPLPSQLGYAVTASQLLSVRYQDQHQQQQSNQLPIQLQITQDKVVLAGFSSWGTRLLSLTYQNQDIDTYVMTGLGGVLPQPEQVLFNLMITLWPVEVWQPQLQRIGWQLTETLTDSSLESSKPNHTAHAKQRTLINDKGQVVADIYYADRQALKGDITFINHALDFTIVIKTLQYQLESNSSAQETH
SIO_010081: VCA1004_RS01815
subclass of: SO_0000673
so part of: VCA1004_RS01815
location: complement(372363..373103)
location: region:372363-373103:-1
so has part: feature:372363-373103:-1:exon

WP_086982149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372363-373103:-1:exon

VCA1004_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01820
so part of: sequence
location: complement(373103..375484)
location: region:373103-375484:-1
so has part: feature:373103-375484:-1:exon
subclass of: SO_0000010

position:375484:-1
position: 375484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373103-375484:-1:exon

VCA1004_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008074339.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MMPL family transporter
translation: MKTNAPIHSSQSRWALLWLIVMVSLTAMLVSQITSKSLPIETNIMALLPKNQQDPRAQLAFDKVAATMSDKVVFLVGSASPQTAITAAQQLEKQLERLDLFTHVDGKVTQSDQQAWGQFFFQARAQLLTEKQQQRLAQHPQEQTQSVIQALYNPFSGVSANELQYDPFLLFREYLQQLTANSGNFQLSQGYLTAQYQGQSYVLLTADLNGSAYSMALQQQLPQLNQLESQIQQEFQTEQISIHHTGVIFYAAHGSESAKSEISTIGVGSLIGIVFLVLIVYRSMMPLNLALLSIACGFLAAFVLTVALFGKVHLFSLVFGASLIGVSIDYAFHYLTERLAAGRQWDANQGLKHIFIAISLGLLTSLIGYLGMLIAPFPGLQQLALFSAIGLTAAYATVVCWYPILAASPSVERPLPCANLLSGWITLWQVRPIRWLIPSVLMILAAIGLCYTQYNDDIRQLQAMPAALKQQETLIKTISGVQNDQQMLLVSADSDEALLQKLAHVSQLLDQQVTQGNLGGYQSLNQFVPSQQQQQHNMALVKALYQSQAESLQQALQLKHTPTLQDNWTPLTLERFLASPISKPVRFMWLGDLDGLRSAIITLNQVTDAAAIQELAAQQQHVSYLNKTAEISQLFGSYRQHVTELLALATLCIFIVVALRYGVKQGVLIVTPPLIAGAVGIAVTVLTGASLNLFNLLALILVFGIGIDYTLFFAEQSKNNLNLATISSTLLAISLSALTTILSFGLLALSDTQAIQSFGVTVLFGIFVSWLLAPLAMKPLVRHPSAANQGATS
SIO_010081: VCA1004_RS01820
subclass of: SO_0000673
so part of: VCA1004_RS01820
location: complement(373103..375484)
location: region:373103-375484:-1
so has part: feature:373103-375484:-1:exon

WP_086982150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373103-375484:-1:exon

VCA1004_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01825
so part of: sequence
location: complement(375486..376142)
location: region:375486-376142:-1
so has part: feature:375486-376142:-1:exon
subclass of: SO_0000010

position:375486:-1
position: 375486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376142:-1
position: 376142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375486-376142:-1:exon

VCA1004_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017048106.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane lipoprotein carrier protein LolA
translation: MNKLTKWKQRRYWQWLWLATMAIFSAPAAYAAQPSLASIQQQLAQQNIVRGDFTQTRRMQMFDAPLVSQGKFVLSRDQGLWWQQTHPFPTSLVLTKNTLSQQIGSEPAQILKVSDNPMVFYFSHVFLSLFKGDTSALTEQFTLSFSSQTDQHWVLSLTPKSSPLDKVFSSIEIEGQQDINKVALMEIRGDSTVIEFSNQTQQPDSLTAAEHAIFAIQE
SIO_010081: VCA1004_RS01825
subclass of: SO_0000673
so part of: VCA1004_RS01825
location: complement(375486..376142)
location: region:375486-376142:-1
so has part: feature:375486-376142:-1:exon

WP_086982151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375486-376142:-1:exon

VCA1004_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01830
so part of: sequence
location: complement(376135..376566)
location: region:376135-376566:-1
so has part: feature:376135-376566:-1:exon
subclass of: SO_0000010

position:376135:-1
position: 376135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376566:-1
position: 376566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376135-376566:-1:exon

VCA1004_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024900.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA thioesterase
translation: MTQTIALSSQVIMTPSFQDADPMGVVYHGNYFRFFEEARRVLLDKIGYNYREMQASGYMWPIIDTRVKYIKPIPFDLTVRVEAKLVEWENRLKVDYVIYDAQNGQRLTKGYTMQVAVSIDTQEMCFVSPNALIDKLNAWNQHE
SIO_010081: VCA1004_RS01830
subclass of: SO_0000673
so part of: VCA1004_RS01830
location: complement(376135..376566)
location: region:376135-376566:-1
so has part: feature:376135-376566:-1:exon

WP_086982152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376135-376566:-1:exon

VCA1004_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01835
so part of: sequence
location: complement(376705..378255)
location: region:376705-378255:-1
so has part: feature:376705-378255:-1:exon
subclass of: SO_0000010

position:376705:-1
position: 376705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378255:-1
position: 378255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376705-378255:-1:exon

VCA1004_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019282455.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aromatic amino acid ammonia-lyase
translation: MTIQTSNNSTITFGAQRLTIEDVISLSQGSQAQMNPAADFVAKIDRGVAFLERLLKQEGVIYGVTTGYGDSCTVAIPMNLVDELPLHLTRFHGCGLGEHLDEQQARAVLATRLCSLSQGVSGVSHELLNQIVTLINHGITPLIPQEGSVGASGDLTPLSYLAAALIGEREVIYQGQVRPTAEVFAELNIAPIKLKPKEGLALMNGTSVMTALACIAYKRAEYLAQLATRITAMVSLGMQGNDFHFDQALFAVKPHQGQQQIAAWLRSDLQAERPPSNSDRLQDRYSLRCAPHVIGVLQDSLPWLRQMIENELNSANDNPIIDGDNERVLHGGHFYGGHIAMAMDTLKTAVANIADLLDRQMAQLMDYKFNNGLPFNLTGATGERKPINHGFKAVQIGISAWTAEALKNTMPASVFSRSTECHNQDKVSMGTIASRDCLRVLQLTEQVASASLLAATQAIELRKRHHELDQQHFSPAINTMMEAVQSEFEFVIEDRPLEADLRLFVAKIQQQAWPLY
SIO_010081: VCA1004_RS01835
subclass of: SO_0000673
so part of: VCA1004_RS01835
location: complement(376705..378255)
location: region:376705-378255:-1
so has part: feature:376705-378255:-1:exon

WP_164520811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376705-378255:-1:exon

VCA1004_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01840
so part of: sequence
location: complement(378233..380005)
location: region:378233-380005:-1
so has part: feature:378233-380005:-1:exon
subclass of: SO_0000010

position:378233:-1
position: 378233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380005:-1
position: 380005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378233-380005:-1:exon

VCA1004_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024902.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MTHFSPCFIIPCYNHGTTMAEVIDSLRPFGYPILIIDDGSDAMTKAALQPLADAADVQLLTHASNQGKGGAMITGLREAHRLGFSHGLQIDADGQHDPAAIPLLIQAAQQHPEHLISGRPIYDDSVPKSRFYGRYATHIWVWIETLSLEIKDSMCGFRAYPLNATVETLNRYSFGKRMDFDSEIMVKMYWQGVSFQFIDTRVFYPENGISHFDALHDNLRISKMHTRLFFGMLPRIPKLIARHFSSAKEKSSASTDTVHWAKSKEQGTVLGIKLLMAVYSLLGRSVFNALLKVVIGYYHKTGTQARQASELYLEQWRQYQGLSSQNSDYSSYQHLLSFGHTMLDKLAGWRGDITRDDLTIHGQQHFDEVIERQQGIVILGSHLGNLELCRAMGRLRQGVTINALVFTEHAERFNQVMKAINPDSSVNLIQVTTLGPDTAILLQQKIEQGEWVVIVGDRTSVTKEQRVVWADFLGKPAPFPQGPFMLATVLAAPVYLMFGLRDENADIRRPKYHVYFEPFSQKITLPRKQRSEALQSVVQDYAARLEYFTLKAPLQWYNFFNFWQLSGSVDQHEPTPTNSVSESNDHTNKQ
SIO_010081: VCA1004_RS01840
subclass of: SO_0000673
so part of: VCA1004_RS01840
location: complement(378233..380005)
location: region:378233-380005:-1
so has part: feature:378233-380005:-1:exon

WP_086982153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378233-380005:-1:exon

VCA1004_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01845
so part of: sequence
location: complement(380046..380465)
location: region:380046-380465:-1
so has part: feature:380046-380465:-1:exon
subclass of: SO_0000010

position:380046:-1
position: 380046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380465:-1
position: 380465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380046-380465:-1:exon

VCA1004_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024903.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-hydroxyacyl-ACP dehydratase
translation: MSITRKPQLIKHQHHHQEHAVTLWLQVDADIEDFKGHFAQFPLLPGVTQIDWAIFYAQQFLQAPAHFQGMEVIKFQEPILKNSLVTLNLTWHRDKQKLYFHYYSQPQDRSQQERSQHDHSQQQDETRTHSSGRILLGES
SIO_010081: VCA1004_RS01845
subclass of: SO_0000673
so part of: VCA1004_RS01845
location: complement(380046..380465)
location: region:380046-380465:-1
so has part: feature:380046-380465:-1:exon

WP_086982154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380046-380465:-1:exon

VCA1004_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01850
so part of: sequence
location: complement(380473..381882)
location: region:380473-381882:-1
so has part: feature:380473-381882:-1:exon
subclass of: SO_0000010

position:380473:-1
position: 380473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381882:-1
position: 381882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380473-381882:-1:exon

VCA1004_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008988634.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AMP-binding protein
translation: MTPISFLPISQLMSRQRSLSHPIAAILSETPHHQHLDWQTFKRDIIQLHQHLQATEQQRWAICCDNSYWFAVAFMAAAHSQKHIIIPGNLQPAALAELSSQFDAILYDEAIDVAFLSGHPQVQLPLSSAQKDQADIQFSPLTNVDITLFTSGSSGQPKAIHKPLAILEKEVAQLEATWGESLRGAITASTVSHQHIYGLLFRILWPLSAGRPFWGHDWQYPEHIIEHANSDTILVSSPALLKRLAPHHTQQAIRAIFSSGGPLDFASAQHCQTLFDYLPHEVLGSTETGGIAHRQQVTSQQPWQAFTGTQIATNPEGCLRIFSPLVDEQHWYQTADQCEIVDPQHFVLKGRADRIIKIEEKRISLTEIEKRLHQLAEVAEAAVIPYQDTNRLITAAAITLTPEGVSRLHSLGKGRFHLMLRKQLHQWIEPVGIPRRFRIIEEIPLNTQGKRLVSDIEQLFHSTQAPIHE
SIO_010081: VCA1004_RS01850
subclass of: SO_0000673
so part of: VCA1004_RS01850
location: complement(380473..381882)
location: region:380473-381882:-1
so has part: feature:380473-381882:-1:exon

WP_086984600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380473-381882:-1:exon

VCA1004_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01855
so part of: sequence
location: complement(381906..382472)
location: region:381906-382472:-1
so has part: feature:381906-382472:-1:exon
subclass of: SO_0000010

position:381906:-1
position: 381906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382472:-1
position: 382472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381906-382472:-1:exon

VCA1004_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006228776.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septation protein IspZ
translation: MRFITALSGLLLLAYPVAVYYGLSRWGLGVIAVIFALLFLLRIVAGHRAKLKELKYIAWLSGGAGIVLTLLAMVFRQHGWLTYYPVVVNVLLFSLFFSSLWQPQTIIERLARIQEPELPESGIGYTRNVTKVWCAYFVINGAIALYTCFLSLEIWTLYNGLISYILTAALFAGEWLVRQRLRQSMSQS
SIO_010081: VCA1004_RS01855
subclass of: SO_0000673
so part of: VCA1004_RS01855
location: complement(381906..382472)
location: region:381906-382472:-1
so has part: feature:381906-382472:-1:exon

WP_086982155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381906-382472:-1:exon

VCA1004_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01860
so part of: sequence
location: complement(382472..382729)
location: region:382472-382729:-1
so has part: feature:382472-382729:-1:exon
subclass of: SO_0000010

position:382729:-1
position: 382729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382472-382729:-1:exon

VCA1004_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006228777.1
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl carrier protein
translation: MTDMNRDEVFNKVREAFVELFEIDADDIKPEAKLYQELDLDSIDAVDLVVHLQKLTGKKIQPDEFKAVRTVDDVVDAVVALLKEK
SIO_010081: VCA1004_RS01860
subclass of: SO_0000673
so part of: VCA1004_RS01860
location: complement(382472..382729)
location: region:382472-382729:-1
so has part: feature:382472-382729:-1:exon

WP_086982156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382472-382729:-1:exon

VCA1004_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01865
so part of: sequence
location: complement(382751..383008)
location: region:382751-383008:-1
so has part: feature:382751-383008:-1:exon
subclass of: SO_0000010

position:382751:-1
position: 382751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383008:-1
position: 383008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382751-383008:-1:exon

VCA1004_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphopantetheine-binding protein
translation: MEQLHNELKALIIEALNLEDIQIEDIDTDAALFGDGLGLDSIDALELGLAIKKQYHVVIDADDSQTRAHFASVANLAKYISSQQA
SIO_010081: VCA1004_RS01865
subclass of: SO_0000673
so part of: VCA1004_RS01865
location: complement(382751..383008)
location: region:382751-383008:-1
so has part: feature:382751-383008:-1:exon

WP_086982157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382751-383008:-1:exon

VCA1004_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01870
so part of: sequence
location: complement(383047..383844)
location: region:383047-383844:-1
so has part: feature:383047-383844:-1:exon
subclass of: SO_0000010

position:383047:-1
position: 383047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383844:-1
position: 383844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383047-383844:-1:exon

VCA1004_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008988638.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysophospholipid acyltransferase family protein
translation: MTQTTLTFSQHCNKYWRVIATGTCFAIFGLGALGLTFIVFPLMTATIRQQTQRELRVQSIIQRAFALFCRTMKFTGAIDYQFDNIEALLQDRNCLIVANHPSLIDYVLIASCLPQCDCLVKAAIWHNPFMKGIVKAAGYIPNRDPESLLDDCSQRLNHGNVLLIFPEGTRTTPGQASKLQRGAAQIAVRTQRDLRVVHISVNPSFLTKQKKWYQVPDTKPFFHIEVKGKIQVDEFIKHSDSPTTAARQLNRHLSSAIFPDMAHKH
SIO_010081: VCA1004_RS01870
subclass of: SO_0000673
so part of: VCA1004_RS01870
location: complement(383047..383844)
location: region:383047-383844:-1
so has part: feature:383047-383844:-1:exon

WP_086982158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383047-383844:-1:exon

VCA1004_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01875
so part of: sequence
location: complement(383853..384599)
location: region:383853-384599:-1
so has part: feature:383853-384599:-1:exon
subclass of: SO_0000010

position:383853:-1
position: 383853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384599:-1
position: 384599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383853-384599:-1:exon

VCA1004_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024909.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl synthase chain length factor
translation: MSTIAFNLEQWHALSPGIDTPQAWKNHSWDQLASSDEAQKPLSTPLIPAMMRRRMSPLSKVALQTALHLQQAHDAPFDYLVFSSRHGELPRTVDLLQQVLQGEEASPMAFSQSVHNTSAGLFTIANKSPIPATSLAGCESSLHHALIESCAYLAENPSHKVLLIDFDAPLPKPYDQFEATPTPPLYALGLILSHGTTTRLTWQPQQPTEQATKRPSQTLDVIKHLAHQSDQWQINDHRNHWLWQRILA
SIO_010081: VCA1004_RS01875
subclass of: SO_0000673
so part of: VCA1004_RS01875
location: complement(383853..384599)
location: region:383853-384599:-1
so has part: feature:383853-384599:-1:exon

WP_086982159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383853-384599:-1:exon

VCA1004_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01880
so part of: sequence
location: 384803..385870
location: region:384803-385870:1
so has part: feature:384803-385870:1:exon
subclass of: SO_0000010

position:384803:1
position: 384803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385870:1
position: 385870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384803-385870:1:exon

VCA1004_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010439258.1
GO function: GO:0008171 - O-methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase
translation: MKPYRHDPYSALEAKTEAQKLAFAPIVFHTARTLRDLGILAALETQPEQGMTAQQIADATQVSEYGVKVLLDMGLSAHIVTWNEQHYVLARLGHSLLRDGMTIANMDFTADVCYAGMMHLTEAIKEGTPAGLKELGEWATIYEGLSQLPEQAKQSWFKFDHFYSDNTFPVLLQKIFSNQPQRIFDIGGNTGKWTLQCCQHDEKVKVTIIDLPQQIELAKPNIAQHGFAERVDFFPANLLDKQQSLPQGADVWWMSQFLDCFSPMEILSILRRVRAAMSENADVYILELFWDAQRYEAASYSLNATSLYFTCLANGNSRFYRSEDFLEIVAEAGFTVNERIDHIGLGHTLLHLKAN
SIO_010081: VCA1004_RS01880
subclass of: SO_0000673
so part of: VCA1004_RS01880
location: 384803..385870
location: region:384803-385870:1
so has part: feature:384803-385870:1:exon

WP_086982160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384803-385870:1:exon

VCA1004_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01885
so part of: sequence
location: 385944..387179
location: region:385944-387179:1
so has part: feature:385944-387179:1:exon
subclass of: SO_0000010

position:385944:1
position: 385944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387179:1
position: 387179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385944-387179:1:exon

VCA1004_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024910.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MEQTSVVIIGAGPSGSIAAAILKQHHIDCVVLERSLFPRFSIGESLLPACMESLKKANLFDAVNQAGFQLKNGAAFRYQDQYTHFDFTQKYTAGEGTTFQVPRATFDKLLADEAELQGVEIRYQHTVTHVNVESTKPVISVLDQHEQAYQIQADFILDASGYGRVLPRLLELEQPSNLPPRQALFTHVTDHISPELARELDYDRNKITIYVHPENTSVWYWLIPFSHGVCSVGVVGSPEFFEAYPDDNIEALKQLTQEEPHLKRLFRDADFCHMSGKIGGYSANVKHLAGKNYALLGNAGEFLDPVFSSGVTIAMKSAELATEVLIRQFNGEAVDWNKDYAEPLMVGVDTFRAYVEGWYDGRFQNVVFFEQANPEIKKKISSILAGYAWDKTNPYVASPQKRLSTLAELCL
SIO_010081: VCA1004_RS01885
subclass of: SO_0000673
so part of: VCA1004_RS01885
location: 385944..387179
location: region:385944-387179:1
so has part: feature:385944-387179:1:exon

WP_086982161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385944-387179:1:exon

VCA1004_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01890
so part of: sequence
location: complement(387341..388471)
location: region:387341-388471:-1
so has part: feature:387341-388471:-1:exon
subclass of: SO_0000010

position:387341:-1
position: 387341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388471:-1
position: 388471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387341-388471:-1:exon

VCA1004_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011082384.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HlyD family secretion protein
translation: METIMTLTYIAFCIAIFKIFRIPLNKWTVPTAVLGGIVLLGSVFLSMNYFQPFTQVGGQIYTTTPMVSNIRARVVSVDVEANTLVKQGDPLVHLDDTPFKAAVVKQKAALAAAQQNVLVLEADYKQAAASSTQALAERDRTQRESARYQKGYKRGAFTLQQVDDKQQAAKAAEAAYQAALANEKAAEAAYKSEIDGVNTTVAEAQAALDKAQFNLDQTVVRAPTDGYVTQLALKPGVMAVPLPFKPILTFVSTQDTYFIGAFRQNSTLNIKEGDEADMIFRSLPGKSFKAEVVQVLPAIAESQIQANGSLLGTNALQTHGRIMVKFELKDDISQYNLPMGANVEIAVYSGKMEELALIRKILIRMKSWQNYVYFDH
SIO_010081: VCA1004_RS01890
subclass of: SO_0000673
so part of: VCA1004_RS01890
location: complement(387341..388471)
location: region:387341-388471:-1
so has part: feature:387341-388471:-1:exon

WP_086982162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387341-388471:-1:exon

VCA1004_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01895
so part of: sequence
location: complement(388471..388860)
location: region:388471-388860:-1
so has part: feature:388471-388860:-1:exon
subclass of: SO_0000010

position:388860:-1
position: 388860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388471-388860:-1:exon

VCA1004_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017028651.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3302 domain-containing protein
translation: MTLDYVALCILIFVVLVLFYGIIAIHDIPYEISKKRNHPHQDAIHVAGWVSLFTLHVLWPFLWIWATLWRADRGWGFTQIQTEQNNIHQKVDELNDQIVHLQQQLTELNKKETTTNPTSKADESKGESN
SIO_010081: VCA1004_RS01895
subclass of: SO_0000673
so part of: VCA1004_RS01895
location: complement(388471..388860)
location: region:388471-388860:-1
so has part: feature:388471-388860:-1:exon

WP_086982163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388471-388860:-1:exon

VCA1004_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01900
so part of: sequence
location: 389117..390130
location: region:389117-390130:1
so has part: feature:389117-390130:1:exon
subclass of: SO_0000010

position:389117:1
position: 389117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390130:1
position: 390130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389117-390130:1:exon

VCA1004_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024913.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bile acid:sodium symporter family protein
translation: MKTNVVRLIKKEWFLLAMVGAILLSLVIPNVGKSAGVLHLDKVTTLGIALIFFLHGVGLSPTALRDGVANWRLHLFIQAATFIVYPLLWVCFGQAFLVFMPSALAFGFCFLFVLPSTISSSVAMTAIGHGNIPGAIFNASLSSLLGIFLTPLFIQFFMGLEGAQFDVMSSVTSIAQMLLLPMVVGQCVRPFILTFFEKHKSSVNKLDKYVILLIVFNAFSDSVNEGIWHSFSLDYVLLSVAICAVVLLVIVNGMKWSAQRLGFKRADEVAAVFCGSKKTLAAGVPMAKVIFGADPRLGMLLLPIMIYHPLQIFYCALLANRYQKQAIEHEQQKEVNV
SIO_010081: VCA1004_RS01900
subclass of: SO_0000673
so part of: VCA1004_RS01900
location: 389117..390130
location: region:389117-390130:1
so has part: feature:389117-390130:1:exon

WP_086982164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389117-390130:1:exon

VCA1004_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01905
so part of: sequence
location: 390130..390750
location: region:390130-390750:1
so has part: feature:390130-390750:1:exon
subclass of: SO_0000010

position:390750:1
position: 390750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390130-390750:1:exon

VCA1004_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001882634.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mechanosensitive ion channel
translation: MSTLMNTDWLLFTQDYYKWFITILVLVFYPMLRRMPARIFLSSMKAGISPHRKQRARLLINSLTSIILICLLLMLWGIELRGLLVVGSSMFALLGVALFAGWSLLSNLTSFLILFTQNDCRVGRWVKVIDGANFIEGEIIEMGFMNVQLRNLEGDSVLYPNNLFMTRPVIVLKNKPEVKVEDTKSGEVKGKNGNKRALPVRHSSFK
SIO_010081: VCA1004_RS01905
subclass of: SO_0000673
so part of: VCA1004_RS01905
location: 390130..390750
location: region:390130-390750:1
so has part: feature:390130-390750:1:exon

WP_232012606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390130-390750:1:exon

VCA1004_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01910
so part of: sequence
location: 390949..391563
location: region:390949-391563:1
so has part: feature:390949-391563:1:exon
subclass of: SO_0000010

position:390949:1
position: 390949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391563:1
position: 391563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390949-391563:1:exon

VCA1004_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GPR1/FUN34/YaaH family transporter
translation: MSTATTTKPANPGPLGLMAFGMTTILLNLHNVGLFPLSSVILAMGIFYGGIAQVIAGIMEYKNGNTFGTTAFTSYGMFWLSLVGLILMPSMGFGEATSAHFLASYLTIWGIFTGFMFIATLPRYPVAKQVVFGSLTILFFLLAAGDFSGNATIGFIAGIVGLFCGSSAVYLAVATIINLEYGRTVLPIGEKKVTAAVESIKAAA
SIO_010081: VCA1004_RS01910
subclass of: SO_0000673
so part of: VCA1004_RS01910
location: 390949..391563
location: region:390949-391563:1
so has part: feature:390949-391563:1:exon

WP_086982165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390949-391563:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1891186
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00050
inference: COORDINATES: profile:INFERNAL:1.1.1
note: FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: flavin mononucleotide
so part of: sequence
location: 391688..391836
location: region:391688-391836:1
so has part: feature:391688-391836:1:region

position:391688:1
position: 391688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391836:1
position: 391836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391688-391836:1:region

VCA1004_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ribB
locus tag: VCA1004_RS01915
so part of: sequence
location: 391952..392614
location: region:391952-392614:1
so has part: feature:391952-392614:1:exon
subclass of: SO_0000010

position:391952:1
position: 391952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392614:1
position: 392614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391952-392614:1:exon

VCA1004_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ribB
locus tag: VCA1004_RS01915
EC number: 4.1.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024916.1
GO function: GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3,4-dihydroxy-2-butanone-4-phosphate synthase
translation: MNQNQPSLLAEFGNPFERVEAALMALKQGQGVLVLDDEDRENEGDLIYSAETLTDTQMALMIREGSGIVCLCLTDEQANQLALPPMVVNNNSQNQTAFTVSIEAKQGVTTGVSAADRVTTIKTAIFADAKPDDLARPGHVFPLRARQGGVFTRRGHTEGTTDLMQLAGLNPAGVLCEVTNPDGTMARAEEIVAFGKLHNMPVLTIDDIVMYRESLIQKQA
SIO_010081: VCA1004_RS01915
subclass of: SO_0000673
so part of: VCA1004_RS01915
location: 391952..392614
location: region:391952-392614:1
so has part: feature:391952-392614:1:exon

WP_086982166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391952-392614:1:exon

VCA1004_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01920
so part of: sequence
location: 392928..393911
location: region:392928-393911:1
so has part: feature:392928-393911:1:exon
subclass of: SO_0000010

position:392928:1
position: 392928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393911:1
position: 393911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392928-393911:1:exon

VCA1004_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017819119.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: permease
translation: MLEIFTTLANWLTYDTFNLPRHTPSAEAIHFFIEDTSKILVLLVLLIYIIAFLRAALNVERVRDFLQGKRKGVGYVLGATFGAITPFCSCSSIPLFMGFISARIPLGVTMAFLVTSPLINEVVVIMLGGILGIKFTLMYIILGISLGVVAGLLIDMTKSYRWLQPFLANIYEHEQQASNTVDVVTTKTLSLKEHHLFAKQEMLAVVKRIWKWVIVGVGIGAMIHGFIPAQWFKENLSAGQWWSVLVSSLIAIPMYTNASGIVPIMASLIDKGVPLGTTLAFCMSAVAVSLPEFIMLKQVMTYRLLAMLAGYIFVAITLIGWMFNYYY
SIO_010081: VCA1004_RS01920
subclass of: SO_0000673
so part of: VCA1004_RS01920
location: 392928..393911
location: region:392928-393911:1
so has part: feature:392928-393911:1:exon

WP_086982167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392928-393911:1:exon

VCA1004_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01925
so part of: sequence
location: 393921..394157
location: region:393921-394157:1
so has part: feature:393921-394157:1:exon
subclass of: SO_0000010

position:393921:1
position: 393921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394157:1
position: 394157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393921-394157:1:exon

VCA1004_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010441308.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin family protein
translation: MKKVNVYGSGCANCTETVNRFIEVAQDMNIKVSVEKTTNLEAIMLAGIMSTPGVAIDGVVKHTGSVPSKEVVMQLLSE
SIO_010081: VCA1004_RS01925
subclass of: SO_0000673
so part of: VCA1004_RS01925
location: 393921..394157
location: region:393921-394157:1
so has part: feature:393921-394157:1:exon

WP_086982168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393921-394157:1:exon

VCA1004_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01930
so part of: sequence
location: 394224..394748
location: region:394224-394748:1
so has part: feature:394224-394748:1:exon
subclass of: SO_0000010

position:394224:1
position: 394224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394748:1
position: 394748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394224-394748:1:exon

VCA1004_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017031834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MKCLLKAWNDNEKLIFNWLVKQTQDQELAQDIMQDVFLSSMKNPNRFCNLDDAKSWLFKVVKNRYIDVLRKQILSEEIDDNVPSHKIEQDTVVQMQTCLPIILPMLSPSERSVIELCDLQGLTQKQYAQQYDLSLSAVKARLLRARKKLKTLLIEQCQVKKEDGVVCCFKGINT
SIO_010081: VCA1004_RS01930
subclass of: SO_0000673
so part of: VCA1004_RS01930
location: 394224..394748
location: region:394224-394748:1
so has part: feature:394224-394748:1:exon

WP_086982169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394224-394748:1:exon

VCA1004_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01935
so part of: sequence
location: complement(394811..394887)
location: region:394811-394887:-1
so has part: feature:394811-394887:-1:exon
subclass of: SO_0000663

position:394811:-1
position: 394811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394887:-1
position: 394887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394811-394887:-1:exon

VCA1004_RS01935
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS01935
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(394851..394853),aa:Ile,seq:cat)
SIO_010081: VCA1004_RS01935
subclass of: SO_0000673
so part of: VCA1004_RS01935
location: complement(394811..394887)
location: region:394811-394887:-1
so has part: feature:394811-394887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394811-394887:-1:exon

VCA1004_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpoD
locus tag: VCA1004_RS01940
so part of: sequence
location: complement(395040..396896)
location: region:395040-396896:-1
so has part: feature:395040-396896:-1:exon
subclass of: SO_0000010

position:395040:-1
position: 395040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396896:-1
position: 396896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395040-396896:-1:exon

VCA1004_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpoD
locus tag: VCA1004_RS01940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020193980.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD
translation: MDQNPQSQLKLLVAKGKEQGYLTYAEVNDHLPEEIVDSEQVEDIIQMINDMGIQVVETAPDADDLMLNEAVADEDAAEAAAAAAAALSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPGTISYILEQFDKVQAEELRLTDIISGFVDPDDDGNAAPTATHVGSELSVVDDDDDDLDDDDEDDDDSETEEEEVGIDPELALERFTELRNTYQNLQLAINEHGRSSKAITDIKQEFLDVFRQFRLVPKQFDYLVNGLKNSMDRVRTQERLIIRTVVEYGKMPKKAFVQAFTGNESSDAWLDDILSSGKPYADKIKQSEEELRRCIFKLKSIEEETSLNVQTIKDISRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPLPEELAERMQMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSTSLKFATKDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSETLRSFLDE
SIO_010081: VCA1004_RS01940
subclass of: SO_0000673
so part of: VCA1004_RS01940
location: complement(395040..396896)
location: region:395040-396896:-1
so has part: feature:395040-396896:-1:exon

WP_126000516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395040-396896:-1:exon

VCA1004_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: dnaG
locus tag: VCA1004_RS01945
so part of: sequence
location: complement(397018..398778)
location: region:397018-398778:-1
so has part: feature:397018-398778:-1:exon
subclass of: SO_0000010

position:397018:-1
position: 397018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398778:-1
position: 398778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397018-398778:-1:exon

VCA1004_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: dnaG
locus tag: VCA1004_RS01945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024919.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MAGHIPRSFIDDLLARVDIVDLVDPRVKLKKQGKNYGACCPFHNEKSPSFIVSPDRQTYHCFGCGVHGNAIDFMMEYEHLEFVEAIEELAHLQGLEVPREQRSGGQFSNSAPKVNAEQKRNLYDLLGSISQYYRSQLKVGANKIAIEYLKNRGLSGEIVQKFGIGYVPDEWDCVRKNFGQQKTVQDMLVEGGMLIENDKGNRYDRFRGRIMFPIRDRRGRVIGFGGRVLGDEKPKYLNSPETPVFHKGKELYGLYDVLQSHREPEQILVVEGYMDVVALAQYGVDYAVAALGTSTTGDHMQMLFRQTSTVVCCYDGDRAGKEAAWRAMENALPYLTDGRQLKFMFLPDGEDPDSYIREHGKQQFEQHVFHATSLSEFLFSTLMQQVDTSSNEGKAKLTSLAVPLIEKVPGGTLRLYLRDLLGKKLGLLDERQLQQLISKNNSTQTTPQPHKEIKRTPMRVVIALLLQKPSYAELAPDLNSIRQIDLPGLSLLLNVLDICRENPNINSAQLMEYWRNQKNEALLSRLMNWDIPLNDDNEQDVFLDTLDKILAQCVEKQIETLQAKERSSGLSVEEKRELQDLILQRP
SIO_010081: VCA1004_RS01945
subclass of: SO_0000673
so part of: VCA1004_RS01945
location: complement(397018..398778)
location: region:397018-398778:-1
so has part: feature:397018-398778:-1:exon

WP_086982171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397018-398778:-1:exon

VCA1004_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01950
so part of: sequence
location: complement(399086..399529)
location: region:399086-399529:-1
so has part: feature:399086-399529:-1:exon
subclass of: SO_0000010

position:399086:-1
position: 399086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399529:-1
position: 399529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399086-399529:-1:exon

VCA1004_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005389489.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GatB/YqeY domain-containing protein
translation: MALIDQLKDEQKLAMKAKDKLRLGTIRLALSAIKQREVDEQITLSDDDIISVLTKMVKQRRDSVTQYEAANRQDLADAEKAEIIVLEEFMPQPLSEEEVAALVDKAILDSGAAGMQDMGNVMGVLKPLLQGRADMGKVSGLVRAKLA
SIO_010081: VCA1004_RS01950
subclass of: SO_0000673
so part of: VCA1004_RS01950
location: complement(399086..399529)
location: region:399086-399529:-1
so has part: feature:399086-399529:-1:exon

WP_086982172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399086-399529:-1:exon

VCA1004_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsU
locus tag: VCA1004_RS01955
so part of: sequence
location: complement(399560..399775)
location: region:399560-399775:-1
so has part: feature:399560-399775:-1:exon
subclass of: SO_0000010

position:399560:-1
position: 399560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399775:-1
position: 399775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399560-399775:-1:exon

VCA1004_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsU
locus tag: VCA1004_RS01955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MPVVKVRDNEPFDVALRRFKRSCEKAGVLSEVRRREHYEKPTTVRKRAKAAAQKRHAKKLARENARRVRLY
SIO_010081: VCA1004_RS01955
subclass of: SO_0000673
so part of: VCA1004_RS01955
location: complement(399560..399775)
location: region:399560-399775:-1
so has part: feature:399560-399775:-1:exon

WP_017024921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399560-399775:-1:exon

VCA1004_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tsaD
locus tag: VCA1004_RS01960
so part of: sequence
location: 400005..401039
location: region:400005-401039:1
so has part: feature:400005-401039:1:exon
subclass of: SO_0000010

position:400005:1
position: 400005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401039:1
position: 401039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400005-401039:1:exon

VCA1004_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tsaD
locus tag: VCA1004_RS01960
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019826876.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MRILGIETSCDETGIAIYDEEQGLLSHQLYSQVKLHADYGGVVPELASRDHVKKTIPLIKAALKEAGLTSSDIDGVAYTAGPGLVGALLVGATIGRSLAYAWNVPAVPVHHMEGHLLAPMLEDNPPAFPFVALLVSGGHTMMVEVNGIGEYQILGESIDDAAGEAFDKTAKLMGLDYPGGPLLSRLAENGTPGRFKFPRPMTDRPGLDFSFSGLKTFAANTIAANDDSEQTRADIAYAFQEAVCDTLVIKCRRALEQTGLKRIVIAGGVSANKQLRLSLEALAKKVGGAVYYPRTEFCTDNGAMIAYAGMQRLRNGEMTDLSVQAQPRWPIDQLEPIAVAPIAE
SIO_010081: VCA1004_RS01960
subclass of: SO_0000673
so part of: VCA1004_RS01960
location: 400005..401039
location: region:400005-401039:1
so has part: feature:400005-401039:1:exon

WP_086982173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400005-401039:1:exon

VCA1004_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: plsY
locus tag: VCA1004_RS01965
so part of: sequence
location: complement(401201..401812)
location: region:401201-401812:-1
so has part: feature:401201-401812:-1:exon
subclass of: SO_0000010

position:401201:-1
position: 401201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401812:-1
position: 401812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401201-401812:-1:exon

VCA1004_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: plsY
locus tag: VCA1004_RS01965
EC number: 2.3.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024923.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO process: GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate 1-O-acyltransferase PlsY
translation: MSILALIMIIFAYLLGSISSAVLICRLCKLPDPRQQGSHNPGATNVLRVGGKSAAIAVLVCDILKGMIPVWLSYYLGIEPLLLGFIGVAACLGHIYPLFFHFKGGKGVATAIGTMAPIGFDLTGMLMATWLVTFFSTRYSSLAAIITTLLAPFYTWLVKPQYTIPVAMLSCLIIFRHYANIKRLIDGSEPKVKSKTATKEAQE
SIO_010081: VCA1004_RS01965
subclass of: SO_0000673
so part of: VCA1004_RS01965
location: complement(401201..401812)
location: region:401201-401812:-1
so has part: feature:401201-401812:-1:exon

WP_086982174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401201-401812:-1:exon

VCA1004_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: folB
locus tag: VCA1004_RS01970
so part of: sequence
location: 401992..402345
location: region:401992-402345:1
so has part: feature:401992-402345:1:exon
subclass of: SO_0000010

position:401992:1
position: 401992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402345:1
position: 402345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401992-402345:1:exon

VCA1004_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: folB
locus tag: VCA1004_RS01970
EC number: 4.1.2.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024924.1
GO function: GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO process: GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroneopterin aldolase
translation: MDKVFIEQLEVITTIGAYDWEQEIKQKLILNLEMAHDNRPAGKSDDVNDALDYAKVSQAVLQHIESGHFQLVERVAEEVAELIMEQFSVPWVKIHLIKPGAVPQAKGVGVIIERGQL
SIO_010081: VCA1004_RS01970
subclass of: SO_0000673
so part of: VCA1004_RS01970
location: 401992..402345
location: region:401992-402345:1
so has part: feature:401992-402345:1:exon

WP_086982175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401992-402345:1:exon

VCA1004_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: folK
locus tag: VCA1004_RS01975
so part of: sequence
location: 402342..402824
location: region:402342-402824:1
so has part: feature:402342-402824:1:exon
subclass of: SO_0000010

position:402342:1
position: 402342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402824:1
position: 402824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402342-402824:1:exon

VCA1004_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: folK
locus tag: VCA1004_RS01975
EC number: 2.7.6.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017102948.1
GO function: GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
translation: MTLAYIGVGSNLERQTHIRAAYQELSLLGLVRASNVYECQPVGFDSHAFYNCVMELDTELSLTQLHHQLRNIELKWGRQPNAQKLQDRTLDLDLLLFGEQVSTDNPTLPRSDIFKFEFVLRPLWELSPQLLIASDGRTIEQIWQQFQGPKNSLTLADFAF
SIO_010081: VCA1004_RS01975
subclass of: SO_0000673
so part of: VCA1004_RS01975
location: 402342..402824
location: region:402342-402824:1
so has part: feature:402342-402824:1:exon

WP_086982176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402342-402824:1:exon

VCA1004_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01980
so part of: sequence
location: complement(402970..403734)
location: region:402970-403734:-1
so has part: feature:402970-403734:-1:exon
subclass of: SO_0000010

position:402970:-1
position: 402970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403734:-1
position: 403734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402970-403734:-1:exon

VCA1004_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01980
EC number: 3.6.1.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024926.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO process: GO:0016311 - dephosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyl-diphosphate phosphatase
translation: MTIFDSIVLGIIEGITEFLPISSTGHMIVVGDWLGIANTDTNQAFEVIIQVAAILAVIANYKEKFHPRFFELWVKVAVAFLPIGIIGFLLSDVVKALFSVTIVGVMFIIGGIIFIAVERYYQEEACPTVDVNDVSMKQAMWIGFAQIFALVPGTSRAGATIIGAMLVGLNRKTCAEFSFLLGLPVLAAASGYDLLKHYQDFTSADFTNLAVGFVTAFIVAYFVIKLFINFLAKFTFVGFGVYRILFGLLLLAMA
SIO_010081: VCA1004_RS01980
subclass of: SO_0000673
so part of: VCA1004_RS01980
location: complement(402970..403734)
location: region:402970-403734:-1
so has part: feature:402970-403734:-1:exon

WP_086982177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402970-403734:-1:exon

VCA1004_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01985
so part of: sequence
location: complement(403876..405099)
location: region:403876-405099:-1
so has part: feature:403876-405099:-1:exon
subclass of: SO_0000010

position:403876:-1
position: 403876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405099:-1
position: 405099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403876-405099:-1:exon

VCA1004_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01985
EC number: 2.7.7.72
EC number: 3.1.3.-
EC number: 3.1.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017046492.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004810 - CCA tRNA nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multifunctional CCA addition/repair protein
translation: MEIYLVGGAVRDHLLGIPNYDKDWVVVGSSPQEMLAQGFRAVGQDFPVFLHPQTQEEYALARTERKSGQGYTGFECHYAPDVSLEEDLARRDLTINAIAQSADGKLYDPYHGQADLEQLLLRHVSPAFSEDPLRVLRVARFAAKLSPLGFSIAPETMQLMKHIVQSGELQYLTAERVWQEWQKSLSTQAPQVFLEVLKECGALADILPEVDALFGVPQPPQWHPEIDTGIHTLMVAQQAAQLSEQLCVRFAAQVHDLGKGVTPKHEWPSHKMHCHSGISLIKTLCQRLTVPNECRDLALLVCQHHSNIHRTFELKASTVLKLFNQIDVWRKPERFQQVLQCCQADHQGRLGMQAAPYPQKHRMQHYYQAAIAIDVQSIIQQGFQGKAIREELDKQRIQAIQQAKESY
SIO_010081: VCA1004_RS01985
subclass of: SO_0000673
so part of: VCA1004_RS01985
location: complement(403876..405099)
location: region:403876-405099:-1
so has part: feature:403876-405099:-1:exon

WP_086982178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403876-405099:-1:exon

VCA1004_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01990
so part of: sequence
location: 405262..407001
location: region:405262-407001:1
so has part: feature:405262-407001:1:exon
subclass of: SO_0000010

position:405262:1
position: 405262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407001:1
position: 407001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405262-407001:1:exon

VCA1004_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MYKDFFGLTDLPFTIVPSSRYIFLSARHREAMNHLQVGLGGGGGFALLTGEVGTGKTTVSKALLSVLDDQVKTGLLLNPTYTSSDLLEAICDEFSIAYQPEASLKQLTQAIYQYLLDNHGKGIKTLLLIDEAQHLSADVLEQLRLLTNLETESQKLLRVLLIGQPELQYKLQTEQLRQLAQRITGRYHLLPLTADEVSQYIQFRLHVAGCQQDIFTAKATKWIAKQTQGVPRLINLVCDKCLLYAYYSGEAQVSLSVAQKACQDVMSFQCPVNMDPASSRSPYAQSVASHRTHVNWVGYAGSLLVGSVVAGLLWMLASTWYVNGHSVQANQLKQDSTSNIHLETESTKAESLTANHSNPEALNTESSSLHKVDELVTPLIQASHNPLASMRTLFSLWGYEVTSTEANCQQAIRAQLYCYQASGSLNDLAVINRPAMLTMQDNYRSYFAILYKLTDDQAQLLMDDERIEVPLNWLKQHWSGEYQLLWHSDLADRTLKLYSKGEEVVKLNRLLSQVLGEPIHNTSEFDHSVKQKVEAFQLWQGIHVDGIAGKKTRMLLDSYVNSQAPRVVDVGVSSFIGEK
SIO_010081: VCA1004_RS01990
subclass of: SO_0000673
so part of: VCA1004_RS01990
location: 405262..407001
location: region:405262-407001:1
so has part: feature:405262-407001:1:exon

WP_086982179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405262-407001:1:exon

VCA1004_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS01995
so part of: sequence
location: 406998..407906
location: region:406998-407906:1
so has part: feature:406998-407906:1:exon
subclass of: SO_0000010

position:406998:1
position: 406998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407906:1
position: 407906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406998-407906:1:exon

VCA1004_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS01995
inference: COORDINATES: protein motif:HMM:NF027851.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: general secretion pathway protein GspB
translation: MMSQVMQALKQSEQAYQAQMPASNGPLRQPASMRAEKRSHYIKATLFVLPLLVVAAMVYPMLIKTKERPQLEAISQSSMAADLGSLQGIKREDPVAQRLSYPELKTLRPLPGSFIVDSRASAAAKPIVKPLVAKQSVSHNTSVPTPVTTNADNSNQSSTGKIIQTDQVNVNDGREDWNVDHLDLSGLSPELAEKFQSALQAHPDSVGASAKRKPSSQQLSDAINLVGNETRFRGRLPAMNFETHMYSSRADSRWIKVNGKNVHEGEWIIDPVVKLQQILPGSLLIQFDNHIIQIPALYEWAG
SIO_010081: VCA1004_RS01995
subclass of: SO_0000673
so part of: VCA1004_RS01995
location: 406998..407906
location: region:406998-407906:1
so has part: feature:406998-407906:1:exon

WP_086982180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406998-407906:1:exon

VCA1004_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02000
so part of: sequence
location: 408123..409385
location: region:408123-409385:1
so has part: feature:408123-409385:1:exon
subclass of: SO_0000010

position:408123:1
position: 408123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409385:1
position: 409385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408123-409385:1:exon

VCA1004_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014232730.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-xanthine permease family protein
translation: MLKVLQGAQMLFVAFGALVLVPLLTGLDPSVALFGAGIGTLLFQFVTKRQVPIFLASSFAFIAPIMYGVQTWGIPSTLGGLMAAGVVYVILATIIRIRGVGFIHRLLPPVVVGPVIMVIGLGLAPAAVNMALGKSGDGGTQLVMHDTALWISSISLLVTIGLSIFGKGWFKLIPIFGGILSGYCASVVFGVVDFTPVQQASWLSLPNFTFPEFNINAVLFMIPVAIAPAVEHVGDILAISNVTGKNYLKKPGLHRTMAGDGVATMAAAFFGAPPNTTYSEVTGAVMLTKAFNPVIMTWTAITALVLAFVGKLGAILQTIPVPVMGGIMILLFGSIAVVGLNTLIKNQVDLHKSRNLVIVAVTLVFGIGGMAFGIGEFSLQGVSLCGIVAIILNLVLPQDIGENHIVDNAQMEDGDTNTNK
SIO_010081: VCA1004_RS02000
subclass of: SO_0000673
so part of: VCA1004_RS02000
location: 408123..409385
location: region:408123-409385:1
so has part: feature:408123-409385:1:exon

WP_086982181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408123-409385:1:exon

VCA1004_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02005
so part of: sequence
location: 409581..411875
location: region:409581-411875:1
so has part: feature:409581-411875:1:exon
subclass of: SO_0000010

position:409581:1
position: 409581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411875:1
position: 411875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409581-411875:1:exon

VCA1004_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008073269.1
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: patatin-like phospholipase family protein
translation: MKRFRIVIGAFSLALLSLSASAQQVMPDGSTRPTIAVVLAGGGAKGAAHIGVLQVLEELHIPVDIVTGTSMGSYVGGLYALGMTAEDIQKTVQGIDWNSGYNDRVGRSERRVRDKEYDDRYQLHTDLGLRWLEVKVPKGVVQGQNMLQILRQSTGNLPAFDSFDQLPVHYRAVATDIVNLKPVIIQEGEIVDAMMASMSVPGALPPYPYKGMLLVDGGVTDNMPVGLARAMGADVIIAVDISTDYKTGEQLNTFLSVGNQLSNYLVRRSTQEQTDLLSSQDVLIKPAVGQMSTTDFSQMPEAYGLGYQAALAHKQVLAQYSIDAQAYRAYQMTKTEKRKAFKSGADLEIKQVNIDNNSHYNEKLLLARLDIKAGQEYTSEQIEQKVRDLYALDRFERVSYDYQDNGDGTTDLNLKVNEKEWGPNYLDFRFFMEDNFQNSSKYSIGMTSNFTDLDDSGAELRANVEIGTDKFFGLELYYPLTYDQQYFLSLEGSYSDEKSNFFIPESYDFSSSYTGQTELSDTENSLPVDYVKWVGDFAIGYQPTLWQELRLGLRYTEGNTSLAGLPAFGDEDYTRQAAYVRYRLDTLDDFNFPTTGYYADVEYLYSFDDYDDESDEKVAEVSTMFMLAKSYQKHTLVGRFDYGVVDSDSSDLPIDPKELGGFLNLSGIPRDSLLGRNKAYTSLVYRYKWFDNDFGLFKSPVYIGGSLEYGGVWNDTNKKWDSDSMYAAGTVFTGVDSPIGPIILAYGQTEEGYRSAYLMIGSMF
SIO_010081: VCA1004_RS02005
subclass of: SO_0000673
so part of: VCA1004_RS02005
location: 409581..411875
location: region:409581-411875:1
so has part: feature:409581-411875:1:exon

WP_232012607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409581-411875:1:exon

VCA1004_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: acnB
locus tag: VCA1004_RS02010
so part of: sequence
location: 412138..414735
location: region:412138-414735:1
so has part: feature:412138-414735:1:exon
subclass of: SO_0000010

position:412138:1
position: 412138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414735:1
position: 414735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412138-414735:1:exon

VCA1004_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: acnB
locus tag: VCA1004_RS02010
EC number: 4.2.1.3
EC number: 4.2.1.99
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017447693.1
GO function: GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
translation: MLEAYRKHVEERAAEGIVPKPLDAEQVAALVELLKTPPQGEEEFILDLFVNRIPPGVDEAAYVKAGFLTAVAKDEAQSPLISREKAAELLGTMQGGYNIEPLVSFLDDELLAPIATEALKHTLLMFDAFHDVEEKAKAGNTFAQAVLQSWADAEWFLKKPKLDDKVTLTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNEREGINPDDPGNVGPIKQIQALEEKGHPLVYVGDVVGTGSSRKSATNSVLWFMGDDIPFVPNKRAGGFCLGGKIAPIFFNTMEDAGALPIELDVSKMHMGDVIDIYPHDGKVCKHGTDDVIATFKLKTDVLYDEVRAGGRIPLIIGRGLTDRARTALGLEPSEVFRRPVPVAESNKGFTLGQKMVGKACGVEGVRPGTYCEPKMTTVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTSAYPKPVDVNTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPLGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGEMKPGITLRDLVHAIPYYGIKQGLLTVEKAGKINEFSGRVLEIEGLEHLTVEQAFELSDASAERSAAGCTVKLSEESIAEYLNSNIVMLKWMISEGYGDRRTIERRIKAMEEWLANPELMSADEDAEYAHVVEIDLAEIDEPILCAPNDPDDARLLSEVQGTQIDEVFIGSCMTNIGHFRAAGKLLEKHKGELETRLWVAPPTKMDKDQLTEEGYYGIFGRAGVRIETPGCSLCMGNQARVAEKSTVMSTSTRNFPNRLGNGANVFLASAELSAVGAILGRIPTKEEYLEYAEQINATAADTYRYLNFHRMEHYTKKADTVIFQEPA
SIO_010081: VCA1004_RS02010
subclass of: SO_0000673
so part of: VCA1004_RS02010
location: 412138..414735
location: region:412138-414735:1
so has part: feature:412138-414735:1:exon

WP_086982182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412138-414735:1:exon

VCA1004_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02015
so part of: sequence
location: 414876..415223
location: region:414876-415223:1
so has part: feature:414876-415223:1:exon
subclass of: SO_0000010

position:414876:1
position: 414876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415223:1
position: 415223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414876-415223:1:exon

VCA1004_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009696084.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HopJ type III effector protein
translation: MELNEFLHQIRTEPLSVEFEQTIAVIDANYTFTPTAFKNGELDNEAGQNNGSCKILAFARQHDLTQAQTLACFGHYYRQDVLAHPENTDHQNIRNFIIHGWDGVVFEGIALSPMH
SIO_010081: VCA1004_RS02015
subclass of: SO_0000673
so part of: VCA1004_RS02015
location: 414876..415223
location: region:414876-415223:1
so has part: feature:414876-415223:1:exon

WP_086982183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414876-415223:1:exon

VCA1004_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02020
so part of: sequence
location: complement(415349..415960)
location: region:415349-415960:-1
so has part: feature:415349-415960:-1:exon
subclass of: SO_0000010

position:415349:-1
position: 415349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415960:-1
position: 415960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415349-415960:-1:exon

VCA1004_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000733232.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR04211 family SH3 domain-containing protein
translation: MKKLLSFVLLACFFAPMTYASEFYISDKLFTYVHSGPSNDYRIIGSVNAGEKIKLLSNNKATGFSQIIDANGRKGWVESKYVTQEVSMSIRLPQLEKELTTVKEQLSHARETSDTEKAGLVSSLELSKKQITDLETNYRNINQQLIDSQEEVRALRAKIDTQKEDLLLRYFMYGGGVAGLGLLFGLILPHIIPRRKRNPGGWA
SIO_010081: VCA1004_RS02020
subclass of: SO_0000673
so part of: VCA1004_RS02020
location: complement(415349..415960)
location: region:415349-415960:-1
so has part: feature:415349-415960:-1:exon

WP_086982184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415349-415960:-1:exon

VCA1004_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02025
so part of: sequence
location: complement(416168..417427)
location: region:416168-417427:-1
so has part: feature:416168-417427:-1:exon
subclass of: SO_0000010

position:416168:-1
position: 416168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417427:-1
position: 417427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416168-417427:-1:exon

VCA1004_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017421275.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic phosphate transporter
translation: MDILANYGTILILVAAFFGFLMAVGIGANDVANAMGTSVGSKALTVKQAIVIAMIFEFAGAYLAGGEVTDTIRKGVIDTSYFASQPDVLVYGMMASLLAAGTWLLLASYMGWPVSTTHSIIGAIIGFACVSVGTEGVDWHSVQGIVGSWIVTPFIAGIFAYGIFVSAQRLIFDTENPLLNAKRFVPVYMFITTMVIALVTIKKGLKHVGLHLTHGEAWLYSAGISGLVMVCGYLYINRRFASHKEDRSFSGVESIFSVLMVITACAMAFAHGSNDVANAIGPLSAVVATVENLGQLTAKSTIAWWILPLGGVGIVVGLATMGHKVMATVGTGITELTPSRGFAAQLATASTVVLASGTGLPISTTQTLVGAVLGVGFARGIAALNLGVVRNIVASWIITLPAGAVLAIVFFYALQGLFG
SIO_010081: VCA1004_RS02025
subclass of: SO_0000673
so part of: VCA1004_RS02025
location: complement(416168..417427)
location: region:416168-417427:-1
so has part: feature:416168-417427:-1:exon

WP_086982185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416168-417427:-1:exon

VCA1004_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02030
so part of: sequence
location: complement(417546..418226)
location: region:417546-418226:-1
so has part: feature:417546-418226:-1:exon
subclass of: SO_0000010

position:417546:-1
position: 417546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418226:-1
position: 418226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417546-418226:-1:exon

VCA1004_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008222549.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR00153 family protein
translation: MPVNTIMGLFAKSPIKPLQEHVVCVNECCSQLIPFFEHCLKSDWDTANQIREDISRLEREADVLKREIRLKLPRGLFMPVDRTDMLELLTQQDKLANLAKDIAGRVIGRQLEIPSQIQESFLAYVSRCLDAAKQAQEVIHELDELLETGFKGREVTLVAEMINQLDEIEDDTDSMQIALRQELMAIESKYNPIDVVFLYKILEWVGGIADQAQRVGARLEVMLSRS
SIO_010081: VCA1004_RS02030
subclass of: SO_0000673
so part of: VCA1004_RS02030
location: complement(417546..418226)
location: region:417546-418226:-1
so has part: feature:417546-418226:-1:exon

WP_086982186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417546-418226:-1:exon

VCA1004_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02035
so part of: sequence
location: 418493..420010
location: region:418493-420010:1
so has part: feature:418493-420010:1:exon
subclass of: SO_0000010

position:418493:1
position: 418493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420010:1
position: 420010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418493-420010:1:exon

VCA1004_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024934.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic triphosphatase
translation: METEIELKFFVSPEFSEVLKKKIAETKVLQHSCKELGNTYFDTTDSWLRLHDIGLRIRQSDDVYVQTVKTAGRVVAGLHQRPEYNAEHSSNEPDLSLHPQDIWPEGRDLQTLQQEIVPLFATNFEREQWLLSMPDGSQIEVAFDQGVVIAGENQSPICEVELELKSGQTESLFTLARVLSDQGGMRLGNLSKAARGYRLAQNYTSDPVVDFSLIETDPKFSVEECFIQSLEHGLSHWHYHEQIYTEQPSIEALEQIDYSIHFIRQLFTVYGGIIPRRGSALLRQELKWLEEELSWLKTSRYLDGLTEDKGYALRKLDCQKQLVAALNEQKEALPDAEAILTLFGSARYTAVLLDLSRWILSKGWQPFLDDKAREKMTQDVKPFAIKQLDRSWAELIEVFPIERTLSCQDYIDQKARLKRNLFTGLAFAYLFDLEQRTQFRLPWVDLLEGVDDLLTLEPLQQLLPTLEAQEQDQVERWIRRQEVSILHAMEQTRMRCTEVSPYWHA
SIO_010081: VCA1004_RS02035
subclass of: SO_0000673
so part of: VCA1004_RS02035
location: 418493..420010
location: region:418493-420010:1
so has part: feature:418493-420010:1:exon

WP_086982187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418493-420010:1:exon

VCA1004_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02040
so part of: sequence
location: complement(420090..420884)
location: region:420090-420884:-1
so has part: feature:420090-420884:-1:exon
subclass of: SO_0000010

position:420090:-1
position: 420090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420884:-1
position: 420884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420090-420884:-1:exon

VCA1004_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000845223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: potassium channel family protein
translation: MKYQTNNDSDFKPMSLMSLLLSFVSLVIVYHLLFMTIDLETRHTLLGIDTAICGLFLLQLTIDCYRSKQRLRYLRQHWLDIVASIPMIEVLRLARIVPIVRIVLLMIRHRQSFLSEAKKNRKEATLATIFTLLIVLITIGSTFMLLFEADAKSSNIHNAGDALWWSLVTISTVGYGDHYPVTFAGKILATAMIICGVGIFGMISGLITSILSSPYKSKPPKHETLSSKQLEQLLKQQQYMIEKIDKLEQQLEHISPKNPPRHDS
SIO_010081: VCA1004_RS02040
subclass of: SO_0000673
so part of: VCA1004_RS02040
location: complement(420090..420884)
location: region:420090-420884:-1
so has part: feature:420090-420884:-1:exon

WP_232012608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420090-420884:-1:exon

VCA1004_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: glnE
locus tag: VCA1004_RS02045
so part of: sequence
location: 421047..423896
location: region:421047-423896:1
so has part: feature:421047-423896:1:exon
subclass of: SO_0000010

position:421047:1
position: 421047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423896:1
position: 423896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421047-423896:1:exon

VCA1004_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: glnE
locus tag: VCA1004_RS02045
EC number: 2.7.7.42
EC number: 2.7.7.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010318058.1
GO function: GO:0008882 - [glutamate-ammonia-ligase] adenylyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
translation: MSLPAPLQALSQQALDALKTRFPNARAQWPDEAYQQLEVVLGLSDFIAESLLADELLFMQLPELLATSNRAQYYRQQLFARLSACHNEAELLHQLRLFRRQEMVVIAWRDFLQQWPLEHSLQHLSMLAEAMIVETYQWQYKACCAEWGTPCNAQGEAQPMLIIGMGKLGGAELNFSSDIDLIFTYPENGETQGQRRHLDNAQFFTRLGQRVIKSLDQTTFDGFCYRVDMRLRPFGESGPLVMSYSALEDYYQEQGRDWERYAMVKARVMGCEMYPQYQELKQMLRPFVFRRYIDFSAIQSLRRMKSMISAEVRRRGLSNNIKLGAGGIREIEFIVQVFQLIRGGREPSLQGRGLLETLAAIDELGLLSSQEVANLRQSYKFLRKLENLLQAIDDKQTQTLPDNECDQQRLAYAMSVDNWPALFALVAQHMDAVHQVFIDLIGEQDESEHSVASHYVEMWDMASQPQTLELIIRQDLDIENAAQLADVIVRFKQDLAKKTLGPRGREVLVRLMPKVFDVVFAHPDAEFGLARVLHLLNNIVTRTTYLELLEEHSGALKQLVRLCTASPMISEKLGRYPILLDELLDPQQLYNPIALTHYRSELRDFLARIPEDDMEQQMEALRQFKQICILRIAAADIAGALPVMKVSDHLTYLAEAIVEAVVQQAWLQLTAKYGEPSHLAHRNGKGFAVVGYGKVGGWELGYNSDLDVVFLHDCPPNVYTDGKKEIDGRQFYLRLAQRIVHIFSVRTPSGILYDIDTRLRPSGTSGLLACTAQTFEEYQLQEAWTWEHQALVRARMIYGDEKLERCFNETRHKILTQEREPQKLKKDVYEMREKMREHLSEKKAGRFMLKQDKGGITDIEFLVQYMVLQYSHQYHALTRWSDNVRILETMAEQGLIETSQAQQLIEAYTCLRNEIHHRNLLNLEADVDQSRFAEHRACITELWSSCLGL
SIO_010081: VCA1004_RS02045
subclass of: SO_0000673
so part of: VCA1004_RS02045
location: 421047..423896
location: region:421047-423896:1
so has part: feature:421047-423896:1:exon

WP_086982188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421047-423896:1:exon

VCA1004_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: hldE
locus tag: VCA1004_RS02050
so part of: sequence
location: 423985..425415
location: region:423985-425415:1
so has part: feature:423985-425415:1:exon
subclass of: SO_0000010

position:423985:1
position: 423985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425415:1
position: 425415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423985-425415:1:exon

VCA1004_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: hldE
locus tag: VCA1004_RS02050
EC number: 2.7.1.167
EC number: 2.7.7.70
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016789747.1
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]; GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
translation: MKPILPDYAQSGVLIIGDVMLDRYWYGPTGRISPEAPVPVVKIENNEERPGGAANVAMNIAALGGNAKLVGLTGEDEPAQVLNQKLSSLNVVCDFVTVPELPTITKLRVMSRGQQLIRLDFEDSFSQVDSQPMLDRLTTYLPQVSALILSDYGKGALDDVQTMIQQAKAAKVPVFIDPKGADFERYRGATLLTPNLSEFELVVGKTKDEQDLVEKGLALIDKFDFDALLVTRSEHGMTLLRRGQEPFHLPTQAQEVFDVTGAGDTVISVLAASVAAGKDLKEACALANAAAGVVVGKLGTSTLSTIELAEAIHGSKDTDYGVISEPALIEAVKQARARGEKVVMTNGCFDILHAGHVSYLNHAAELGDKLIVAVNTDESVKRLKGPGRPVNPTDRRMAVLAGLGAVDWVVPFSEDTPQRLISEVLPSLLVKGGDYQPEEIAGGAEVIAAGGEVKVLNFEDGCSTSEIINAIKGGKG
SIO_010081: VCA1004_RS02050
subclass of: SO_0000673
so part of: VCA1004_RS02050
location: 423985..425415
location: region:423985-425415:1
so has part: feature:423985-425415:1:exon

WP_086982189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423985-425415:1:exon

VCA1004_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tolC
locus tag: VCA1004_RS02055
so part of: sequence
location: complement(425504..426853)
location: region:425504-426853:-1
so has part: feature:425504-426853:-1:exon
subclass of: SO_0000010

position:425504:-1
position: 425504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426853:-1
position: 426853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425504-426853:-1:exon

VCA1004_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tolC
locus tag: VCA1004_RS02055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017072793.1
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane channel protein TolC
translation: MKKLLPLFISLSLGGIHLAHADDLAQIYNQAKENDPQLLSSKADRDAAFEAIESSRGDLLPQINLTAGYNINRNINSHNNDPVESYGASTSEQNVFTAGLDFSQQLYSRDSWVNLDIAEQNARQQDSAYAAAQQEMILRVSQAYFDVLQAQDNLTFIQAEKKAVGRQLEQTKQRFEVGLSAITDVHDAQAQYDSVLADEIIAQNDLTNSYEALREITGQDNKDLRVLDTKRFTASTPQTTQASLVDEAKQKNLSLLTARIAQDIAKSNISLAQSGYSPSLTLDGGYQYSDIDEHNSHSPYSNYTSNDYNIGVNLVIPLYQGGSTSADVKTAQYQYVSTSQQLEETYRSVVKDVRAYYNNINASIGTIRAYQQSVISAKSALEATEAGYEVGTRTIVDVLDSTRSLYDANRNLSDARYNYILSVLQLKQAVGTLSEQDVLDINAGLIAAK
SIO_010081: VCA1004_RS02055
subclass of: SO_0000673
so part of: VCA1004_RS02055
location: complement(425504..426853)
location: region:425504-426853:-1
so has part: feature:425504-426853:-1:exon

WP_086982190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425504-426853:-1:exon

VCA1004_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: nudF
locus tag: VCA1004_RS02060
so part of: sequence
location: 427083..427706
location: region:427083-427706:1
so has part: feature:427083-427706:1:exon
subclass of: SO_0000010

position:427083:1
position: 427083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427706:1
position: 427706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427083-427706:1:exon

VCA1004_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: nudF
locus tag: VCA1004_RS02060
EC number: 3.6.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017042670.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP-ribose diphosphatase
translation: MNFKPFTSLFQSQDIQIESKERVFNGFFKVIKYSFKHRLFRGGWSGLITREMFERGHASALLAFDAKRDEVVLIEQIRVGALEHHSPWQLEIIAGMNDQDESSEAVVRREAMEEAGVLVGEVEAISHYYASSGGCSETIDVFVGQIDATTASGVHGLDSENEDIKVHVMTREQAYQLVESGVIENGATIIALQWLQLNHTKLKQRWC
SIO_010081: VCA1004_RS02060
subclass of: SO_0000673
so part of: VCA1004_RS02060
location: 427083..427706
location: region:427083-427706:1
so has part: feature:427083-427706:1:exon

WP_086982191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427083-427706:1:exon

VCA1004_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02065
so part of: sequence
location: 427773..428195
location: region:427773-428195:1
so has part: feature:427773-428195:1:exon
subclass of: SO_0000010

position:427773:1
position: 427773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428195:1
position: 428195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427773-428195:1:exon

VCA1004_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024939.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1249 family protein
translation: MTKTYHVDLAGLMRVYETNYAKMNSLLPSAHEVGETRSYQVSQMAYQLEVKEVTRYTTLVDVCQCDVRPIFPLPRMRVRLYHDARVAEVCASEQISRVEARYDYPNKKMMQKDEKFQVNQFLGEWLSFCLRHGISRAPIY
SIO_010081: VCA1004_RS02065
subclass of: SO_0000673
so part of: VCA1004_RS02065
location: 427773..428195
location: region:427773-428195:1
so has part: feature:427773-428195:1:exon

WP_086982192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427773-428195:1:exon

VCA1004_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: cpdA
locus tag: VCA1004_RS02070
so part of: sequence
location: 428239..429078
location: region:428239-429078:1
so has part: feature:428239-429078:1:exon
subclass of: SO_0000010

position:428239:1
position: 428239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429078:1
position: 429078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428239-429078:1:exon

VCA1004_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: cpdA
locus tag: VCA1004_RS02070
EC number: 3.1.4.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024940.1
GO function: GO:0004115 - 3',5'-cyclic-AMP phosphodiesterase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3',5'-cyclic-AMP phosphodiesterase
translation: MTTLKTDFPNLLEPDLADVTLVQITDTHLFSDRERALLGVNTLDSFTAVVEDITTSKRHYDALLMTGDVSQDHTDASYTLFEQGIAPLQKPCFWLPGNHDYQPNMYSVYPSPQIQEDTHLLVGKHWQIILLDSQVEGCPHGVLSAQQLQYLSQKLADYPERFSLILLHHHPLLVGSAWLDQHCLHNSEAFWQVLQPHSNVKAVLCGHVHQDFHQHYQGVEVLTSPSTCIQFKPQSHEFALDTVSPGWRSLTLKANGQIETQVYRLASSDFQPDFESQGY
SIO_010081: VCA1004_RS02070
subclass of: SO_0000673
so part of: VCA1004_RS02070
location: 428239..429078
location: region:428239-429078:1
so has part: feature:428239-429078:1:exon

WP_232012609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428239-429078:1:exon

VCA1004_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: yqiA
locus tag: VCA1004_RS02075
so part of: sequence
location: 429164..429748
location: region:429164-429748:1
so has part: feature:429164-429748:1:exon
subclass of: SO_0000010

position:429164:1
position: 429164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429748:1
position: 429748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429164-429748:1:exon

VCA1004_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: yqiA
locus tag: VCA1004_RS02075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005431720.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: esterase YqiA
translation: MNKPSMLLYLHGFNSSPNSHKANLIREYCQQYRPDITLVIPQLPHFPKRASDYLDAFISNHHRDYNIGLVGSSLGGYLATWLNDKYGCRAVVVNPAVRPFELLVDYLGQQTNPYTNQSYVLEEKHILELKALEITRLRSPNDFWLLQQQGDEVLDYRQAVDKYKHSRSTIEELGDHSFVGFERYPQQIVEFLAL
SIO_010081: VCA1004_RS02075
subclass of: SO_0000673
so part of: VCA1004_RS02075
location: 429164..429748
location: region:429164-429748:1
so has part: feature:429164-429748:1:exon

WP_164520812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429164-429748:1:exon

VCA1004_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: parE
locus tag: VCA1004_RS02080
so part of: sequence
location: 429973..431859
location: region:429973-431859:1
so has part: feature:429973-431859:1:exon
subclass of: SO_0000010

position:429973:1
position: 429973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431859:1
position: 431859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429973-431859:1:exon

VCA1004_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: parE
locus tag: VCA1004_RS02080
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000195318.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit B
translation: MTEQYNAGAIEVLNGLEPVRRRPGMYTDTVRPNHLAQEVIDNSVDEALAGHASKVQVTLFADQSIEVTDDGRGMPVDIHPEEKISGVELIFCKLHAGGKFSNKSYQFSGGLHGVGISVVNALSKRVEVQIRRDGQVYEIAFENGDKVKELEVTGTCGRRNTGTSVHFWPDTSFFDSGNFSVSRLINNLRAKAVLCPGLEIEFIDKVNGNTHKWYYEDGLKDYLVEGVKGFPVLPEEPFTGEFTGQIEAANWAIIWLPEGGDLITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRGVKLTGDDIFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNEKPQIAELLAEACIASAHRRMRASKKVVRKKVASGPALPGKLTDCSVQDLNRTELFLVEGDSAGGSAKQARDREFQAIMPLRGKILNTWEVSSDQVLASDEVHNISIALGIDPDTDNLDGLRYGKICILADADSDGLHIATLLCALFMRHFESLVRAGHVYVAMPPLFRIDCGKEVFYALDEGEKDGILERLSNKKAKINVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDNEQTIEMMDMLLGKKRAEDRRNWLQAYGDQADVEL
SIO_010081: VCA1004_RS02080
subclass of: SO_0000673
so part of: VCA1004_RS02080
location: 429973..431859
location: region:429973-431859:1
so has part: feature:429973-431859:1:exon

WP_086982194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429973-431859:1:exon

VCA1004_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: parC
locus tag: VCA1004_RS02085
so part of: sequence
location: 431887..434148
location: region:431887-434148:1
so has part: feature:431887-434148:1:exon
subclass of: SO_0000010

position:431887:1
position: 431887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434148:1
position: 434148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431887-434148:1:exon

VCA1004_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: parC
locus tag: VCA1004_RS02085
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006074464.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit A
translation: MSSEMTFDGVEQLTLRKFTEDAYLNYSMYVIMDRALPYVGDGLKPVQRRIIYAMSELGLSAAAKYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTEAKLSKFAEVLLGELGQGTVEWTPNFDGTMKEPKMLPARLPHILLNGITGIAVGMATDIPPHNVREIANAAIHLIDNPKAELSEIMTHVKGPDYPTEAEIISPAADIEKIYRNGRGSIKMRAVWHKESSDIVITALPHQVSGAKLLEQIANQMRAKKLPMVDDLRDESDHENPTRIVIVPRSNRVDCDQLMNHLFASTDLEKNYRVNLNMIGLDNRPEVKGLVKILQEWLEFRKTTVRRRLQYRLDKVLDRLHILEGLLVAYLNLDEVIEIIRTEDEPKEVLMARFGITEIQANAILDTRLRNLAKLEEMKLRGEQDELEKERQKLEQLLGSERRLNTLIKKEIQADAEKYGDDRRSPLVERAEAKALTERDLIPSEPITVVLSEKGWIRHAKGHDVDPASLNYKSGDEYLAHAHGKSNQQAVFLGTDGRSYSLESHSLPSARSQGEPITGRLGIAEGSHVRQVVMGEDEQLWLIASDAGYGFVCKGSDLLSKNRSGKALINLPENSEVLPPSPISDLDKDEILVITNDGRMLLFPIKDLPQLSKGKGNKIINIPSAKAKTREEVVSQLIAIPYGVSVTLYAGKRKLGLKPIDLDNFRGERGRRGGKLPRGLQRVTKIEVDHPESAE
SIO_010081: VCA1004_RS02085
subclass of: SO_0000673
so part of: VCA1004_RS02085
location: 431887..434148
location: region:431887-434148:1
so has part: feature:431887-434148:1:exon

WP_086982195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431887-434148:1:exon

VCA1004_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02090
so part of: sequence
location: 434384..435586
location: region:434384-435586:1
so has part: feature:434384-435586:1:exon
subclass of: SO_0000010

position:434384:1
position: 434384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435586:1
position: 435586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434384-435586:1:exon

VCA1004_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007463621.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside transporter C-terminal domain-containing protein
translation: MVYLQFFFALLVVTGLALLGSRNRSEIKIRYILQLLLVEIALAFFFLHSDVGTGIIRSISAGFEALMEFAAQGTNFVFGGLLNAGEFSFFLNVLMPIVLISALIGILQHIKLLPIVIQAIGFVLSKVNGMGRLESFNAISALMVGQSENFITYKDILGKMSEKRMYTLAATAMSTVSMSIVGSYMQLIDPKYVVTALILNMFSSFTILSLINPYDYDAEVDFNDMVKQGQDEQPKDSFFEMLGEYILTGFKVAVIVAAMLIGFIALIALINHGFDLVFGITFQAVLGYVFYPIAWLIGVPSSEALQAGSIMATKLVTNEFVAMLELKDQAANLSEITVGTLSIFLVSFANFSSIGIIAGAVKGVNEEKGNMVAKFGLRLLYGATLVSILSAIIANFVFSL
SIO_010081: VCA1004_RS02090
subclass of: SO_0000673
so part of: VCA1004_RS02090
location: 434384..435586
location: region:434384-435586:1
so has part: feature:434384-435586:1:exon

WP_086982196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434384-435586:1:exon

VCA1004_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: degS
locus tag: VCA1004_RS02095
so part of: sequence
location: complement(435772..436836)
location: region:435772-436836:-1
so has part: feature:435772-436836:-1:exon
subclass of: SO_0000010

position:435772:-1
position: 435772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436836:-1
position: 436836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435772-436836:-1:exon

VCA1004_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: degS
locus tag: VCA1004_RS02095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017035538.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0045152 - antisigma factor binding [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane-stress sensor serine endopeptidase DegS
translation: MVNFLLRPILIGLATAVVILFAVPSLRQDILHIESEPKAETFDDMQISFSHAVHRAGPAVANIYSRQYVEGDRLKLKTQGLGSGVIVSDKGYIITNYHVVAQADQIVVALQDGRVSSAQLVGSDKRTDIAVLKVEMNNLPVIPQNPDSNSKVGDVVLAIGNPYNLGQTTTFGIISAIGRSSVSADGRQAFIQTDAAINKGNSGGALVNTLGELIGINTASFQQATDLETYGISFAIPYKLAHKIMTKIIADGRVIRGYIGIDAQDMNAVAARLLGIDYVNGIVVLSIAEGSPADKATLKEKDVIVGIDGKKVINSQSVLDMVAEFRPGTVVNFDILRDGKSLTLPVTIAEDPRD
SIO_010081: VCA1004_RS02095
subclass of: SO_0000673
so part of: VCA1004_RS02095
location: complement(435772..436836)
location: region:435772-436836:-1
so has part: feature:435772-436836:-1:exon

WP_086982197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435772-436836:-1:exon

VCA1004_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02100
so part of: sequence
location: complement(436969..438342)
location: region:436969-438342:-1
so has part: feature:436969-438342:-1:exon
subclass of: SO_0000010

position:436969:-1
position: 436969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438342:-1
position: 438342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436969-438342:-1:exon

VCA1004_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02100
EC number: 3.4.21.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000749332.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Do family serine endopeptidase
translation: MKKPLLVLSAISLSLSAVLTPVSASATLPTSLNGQEMPSLAPMLEQVTPAVVSVLVEGKKHASGQSIPEQFRFFFGPDFPVPAQPERQFRGLGSGVIIDANKGYIVTNYHVINEADKIQVALSDGREIKATLIGGDKLSDIAILKLEKSVSGLTQIKMADSDQLRVGDFAVAIGNPFGLGQTVTSGIISALGRSGLNIENFENFIQTDAAINTGNSGGALVNLKGELVGINTAILGPNGGNVGIGFAIPSNMVKNLTEQIIEFGGVKRGILGIQGGEITPDLAEAMGYDSSKGAFVSQVMPNSAAEKAGLKAGDVLVSINDKKINTFGELRAKIATIGAGKTVKIGIIRDGKNITKNVTLGEAEQIQANAAELHPGLDGAKFSNTDSHDPIAGVKITDITKGSAAERYQLQAGDIIIGVNRTRVKNLAQMQKVLEQKTNILALNIQRGERTIYLVVQ
SIO_010081: VCA1004_RS02100
subclass of: SO_0000673
so part of: VCA1004_RS02100
location: complement(436969..438342)
location: region:436969-438342:-1
so has part: feature:436969-438342:-1:exon

WP_086982198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436969-438342:-1:exon

VCA1004_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: zapG
locus tag: VCA1004_RS02105
so part of: sequence
location: complement(438417..438854)
location: region:438417-438854:-1
so has part: feature:438417-438854:-1:exon
subclass of: SO_0000010

position:438417:-1
position: 438417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438854:-1
position: 438854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438417-438854:-1:exon

VCA1004_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: zapG
locus tag: VCA1004_RS02105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010434684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Z-ring associated protein ZapG
translation: MVFLYAAVGLVIGIIIGIIIARLMTPEYKKHKQLQKELETTKFELEQHRQDLSDHFSNTAEMLDSLGKSYTKLYQHMAQTSSDLLPNLPKQENPFITQAAEESSEDKHHEEITDVQPKDYANGSTGLLKDQKKTLSNSPEMNKAS
SIO_010081: VCA1004_RS02105
subclass of: SO_0000673
so part of: VCA1004_RS02105
location: complement(438417..438854)
location: region:438417-438854:-1
so has part: feature:438417-438854:-1:exon

WP_086982199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438417-438854:-1:exon

VCA1004_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: zapE
locus tag: VCA1004_RS02110
so part of: sequence
location: 439027..440127
location: region:439027-440127:1
so has part: feature:439027-440127:1:exon
subclass of: SO_0000010

position:439027:1
position: 439027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440127:1
position: 440127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439027-440127:1:exon

VCA1004_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: zapE
locus tag: VCA1004_RS02110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010318043.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapE
translation: MTPKQKYLYDIEHLGFQPDQAQHNAVEKLDQLYHQFLEYVSTPRKKTSLFSQLFQRQKETAPPKGLYFWGGVGRGKTYLMDVFYDALPYAKKSRMHFHRFMLRVHKELGLLKDVEDPLQKVADILKQETDIICFDEFFVSDITDAMILGTLFEALFERGMVLVATSNIPPKELYRNGLQRARFLPAIRLIEQHCTEVNVDSGVDYRLRTLEQAEIYHFPLDDKAADNLQRYYRQLSRGELKEATSILINHRQIAVKGACDGVLYANFSQLCESSRSQSDYIEISRLYHTVLLAEVKQMDSTRDDAARRFIALVDEFYERNVTLILSAEVALSDLYTQGRLEFEFQRCQSRLIEMQSVAYLSNEHLA
SIO_010081: VCA1004_RS02110
subclass of: SO_0000673
so part of: VCA1004_RS02110
location: 439027..440127
location: region:439027-440127:1
so has part: feature:439027-440127:1:exon

WP_086984605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439027-440127:1:exon

VCA1004_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rplM
locus tag: VCA1004_RS02115
so part of: sequence
location: 440461..440889
location: region:440461-440889:1
so has part: feature:440461-440889:1:exon
subclass of: SO_0000010

position:440461:1
position: 440461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440889:1
position: 440889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440461-440889:1:exon

VCA1004_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rplM
locus tag: VCA1004_RS02115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MKTFVAKPETVKRDWYVVDAEGKTLGRLASEIASRLRGKHKAEYTPHVDTGDYIIVVNAEKVAVTGNKAKGKIYYRHSEFPGGLKSISFEKLIDHKPEMAIELAVKGMLPRGPLGRAMYRKLKVYAGAEHNHAAQQPQVLDI
SIO_010081: VCA1004_RS02115
subclass of: SO_0000673
so part of: VCA1004_RS02115
location: 440461..440889
location: region:440461-440889:1
so has part: feature:440461-440889:1:exon

WP_086982200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440461-440889:1:exon

VCA1004_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsI
locus tag: VCA1004_RS02120
so part of: sequence
location: 440905..441297
location: region:440905-441297:1
so has part: feature:440905-441297:1:exon
subclass of: SO_0000010

position:440905:1
position: 440905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441297:1
position: 441297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440905-441297:1:exon

VCA1004_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsI
locus tag: VCA1004_RS02120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MAENQYYGTGRRKSSAARVFIKPGSGNIVINKRDLDTYFGRPTSRMVVKQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRPALRAAGYVTRDARCVERKKVGLRKARRKPQFSKR
SIO_010081: VCA1004_RS02120
subclass of: SO_0000673
so part of: VCA1004_RS02120
location: 440905..441297
location: region:440905-441297:1
so has part: feature:440905-441297:1:exon

WP_086982201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440905-441297:1:exon

VCA1004_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: petA
locus tag: VCA1004_RS02125
so part of: sequence
location: 441888..442481
location: region:441888-442481:1
so has part: feature:441888-442481:1:exon
subclass of: SO_0000010

position:441888:1
position: 441888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442481:1
position: 442481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441888-442481:1:exon

VCA1004_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: petA
locus tag: VCA1004_RS02125
EC number: 7.1.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008077318.1
GO component: GO:0045275 - respiratory chain complex III [Evidence IEA]
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008121 - ubiquinol-cytochrome-c reductase activity [Evidence IEA]
GO process: GO:0009060 - aerobic respiration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ubiquinol-cytochrome c reductase iron-sulfur subunit
translation: MSNAPINNGRRRFLTATTAVVGGIGAVAVAVPFIKSWNPSERAKAAGAPVEVDISKLEEGQLVRVEWRGKPVWVVRRSKSTLAELDSLDDKLRDPASEQEQQPEYAQNKYRSIKPDYFVAVGICTHLGCSPTYLPDSFSEQVQGVKSGFFCPCHGSKFDLAGRVFQGVPAPLNLVVPEHGYLSDSRIIIGESRGGEA
SIO_010081: VCA1004_RS02125
subclass of: SO_0000673
so part of: VCA1004_RS02125
location: 441888..442481
location: region:441888-442481:1
so has part: feature:441888-442481:1:exon

WP_086982202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441888-442481:1:exon

VCA1004_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02130
so part of: sequence
location: 442481..443749
location: region:442481-443749:1
so has part: feature:442481-443749:1:exon
subclass of: SO_0000010

position:443749:1
position: 443749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442481-443749:1:exon

VCA1004_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001148351.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome bc complex cytochrome b subunit
translation: MQALLDWVEKRLPVMDAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQILTGIWLTMNYVPSGDGAFASVEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIFGMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATLNRFFALHVIALPIVLLLLVVLHVLALHEVGSNNPDGIDTKIPKAPDDNGEHKTQFKFHKQFTKKYNIIDSVPFHPYGTVKDLVGVAGFLFFFSYVLFFNPEMGGYFLEPPNFEAANPLKTPEHIAPVWYFTPFYAILRAVPDKLLGVAAMGASILFLFLLPWFDRCKVRSYRYRSKWHLLNICQFVVCFIGLGILGTLPATSLYTLLSQIFSLGYFMFFVLLYFYSKNEATKPLPERVTFK
SIO_010081: VCA1004_RS02130
subclass of: SO_0000673
so part of: VCA1004_RS02130
location: 442481..443749
location: region:442481-443749:1
so has part: feature:442481-443749:1:exon

WP_086982203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442481-443749:1:exon

VCA1004_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02135
so part of: sequence
location: 443746..444486
location: region:443746-444486:1
so has part: feature:443746-444486:1:exon
subclass of: SO_0000010

position:443746:1
position: 443746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444486:1
position: 444486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443746-444486:1:exon

VCA1004_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017190074.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c1
translation: MKKWIVGLLTIMLPFTVMAAGGNVHLDSANNDLTDKASLQRGAKTFMSYCAACHSTQYQRYQRVATDLGIPDDLMMENLVFDPKAKIGDLMTNAIPAEDAGKWFGSPPPDLTLVARVRGVDWLYTYLRSFYTDPSRPFGVNNITFPNVGMPHVLEGLQGIPEPVYDTQTIDGEEHKVVVGTQVSKMGELTSEEYDNTVRDLVNFLEYSGDPVKLERHALGWWVMAFLVIFTIIVVLLKKEYWRDVH
SIO_010081: VCA1004_RS02135
subclass of: SO_0000673
so part of: VCA1004_RS02135
location: 443746..444486
location: region:443746-444486:1
so has part: feature:443746-444486:1:exon

WP_086982204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443746-444486:1:exon

VCA1004_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: sspA
locus tag: VCA1004_RS02140
so part of: sequence
location: 444639..445274
location: region:444639-445274:1
so has part: feature:444639-445274:1:exon
subclass of: SO_0000010

position:444639:1
position: 444639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445274:1
position: 445274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444639-445274:1:exon

VCA1004_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: sspA
locus tag: VCA1004_RS02140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006877359.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stringent starvation protein SspA
translation: MAVAANKRSVMTLFSSASDMYSHQVRIVLAEKGVSVEVELVDEENLPSDLIELNPYKSVPTLVDRELALYNSNIIMEYLDERFPHPPLMPVYPVARGNSRLMMYRIERNWYSQAEKIMTGSAEEAEAARVKLRNDLLTLAPVFAEYEHFMSEEFSLIDCYLAPLLWRLPTLGIELSGPGSKELKIYMSRVFERDSFLASLTEAEREMRLVR
SIO_010081: VCA1004_RS02140
subclass of: SO_0000673
so part of: VCA1004_RS02140
location: 444639..445274
location: region:444639-445274:1
so has part: feature:444639-445274:1:exon

WP_086982205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444639-445274:1:exon

VCA1004_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: sspB
locus tag: VCA1004_RS02145
so part of: sequence
location: 445279..445767
location: region:445279-445767:1
so has part: feature:445279-445767:1:exon
subclass of: SO_0000010

position:445279:1
position: 445279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445767:1
position: 445767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445279-445767:1:exon

VCA1004_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: sspB
locus tag: VCA1004_RS02145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ClpXP protease specificity-enhancing factor
translation: MDMNKMTPRRPYLIRAFYEWLVDNDLTPHLVVEATLPGVRVPIEFVQDGQIILNVAPRAVGNLEISNDAIMFNARFSGRPHSVIVPIYAVQAIYARENGAGTMFEPEEAYEAEFEENMEEDVASSLSNVDTTLDVEEREGSTAIETDSSSKPKGRPTLTVVK
SIO_010081: VCA1004_RS02145
subclass of: SO_0000673
so part of: VCA1004_RS02145
location: 445279..445767
location: region:445279-445767:1
so has part: feature:445279-445767:1:exon

WP_086982206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445279-445767:1:exon

VCA1004_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: metA
locus tag: VCA1004_RS02150
so part of: sequence
location: 446282..447223
location: region:446282-447223:1
so has part: feature:446282-447223:1:exon
subclass of: SO_0000010

position:446282:1
position: 446282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447223:1
position: 447223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446282-447223:1:exon

VCA1004_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: metA
locus tag: VCA1004_RS02150
EC number: 2.3.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004413895.1
GO function: GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
GO process: GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homoserine O-succinyltransferase
translation: MPIKIPDQLPASDILRQERIFIMSETRATTQMIRPLKVLILNLMPKKIETETQFLRLLSNSPLQVDIELLRIDDRPSKNTPTEHLNNFYRQFDMVKDRNFDGLIITGAPLGLVQFEDVVYWDHLQTVMTWAKDHVTSTLYVCWAAQAGLKLLYDLPKQTRDEKLSGVYQHSVVSEFHPIVRGFDDGFLAPHSRYADFSADYLAEHTDLDILATSDDAGVYLAATKDKRHVFVTGHPEYDANTLHNEYVRDLAEGLDPAIPVNYYPNDNPDNPPCASWRSHGHLLFANWLNYCVYQQTPYDLEHFSVENFTKDD
SIO_010081: VCA1004_RS02150
subclass of: SO_0000673
so part of: VCA1004_RS02150
location: 446282..447223
location: region:446282-447223:1
so has part: feature:446282-447223:1:exon

WP_086982207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446282-447223:1:exon

VCA1004_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02155
so part of: sequence
location: complement(447356..447976)
location: region:447356-447976:-1
so has part: feature:447356-447976:-1:exon
subclass of: SO_0000010

position:447356:-1
position: 447356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447976:-1
position: 447976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447356-447976:-1:exon

VCA1004_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023780.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRIC cation channel family protein
translation: MHISLLYIFDLFGTAIFAISGVLLAGRLKMDPFGMVVLASVTAIGGGSIRDMMLGSTPVFWIIDNNYLWVVFVTCLFTLLLVRRPRKLSWYVLPVCDAIGLAVFVGIGVEKSLLLQDSMLVAVIMGVITGCGGGIIRDILAREIPMVLRSEIYATACIAGGIIHTLSLYFDLPSQVSFLLGVTTTLTIRLAAIRWHLALPTLSLKH
SIO_010081: VCA1004_RS02155
subclass of: SO_0000673
so part of: VCA1004_RS02155
location: complement(447356..447976)
location: region:447356-447976:-1
so has part: feature:447356-447976:-1:exon

WP_086982208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447356-447976:-1:exon

VCA1004_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02160
so part of: sequence
location: complement(448059..448889)
location: region:448059-448889:-1
so has part: feature:448059-448889:-1:exon
subclass of: SO_0000010

position:448059:-1
position: 448059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448889:-1
position: 448889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448059-448889:-1:exon

VCA1004_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004724134.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helical backbone metal receptor
translation: MLRKQLLAITLWLAATTQVMAAHPHVAQRVITLSPHATELAFSAGLGDKIVGVSQASDYPPEAGNIEQIASYQNIKLERVLTLQPDLVIAWHSNANAKELDKIKQFGIPIYYSDIETLSDIPKNIRQLSQWAADPTIGQHNAAVFEATLEYLHRKYQHRSKVRYFYQLSDQPLMSFSPPHWPNDILSVCGGQNILSQQAVAYPQVNQEQIIALKPDVIFIPEDSLSHSIWQKWPQIPAVKHQFIWSLNPDWISRPTMRSLKALEQVCHYLDKVRSL
SIO_010081: VCA1004_RS02160
subclass of: SO_0000673
so part of: VCA1004_RS02160
location: complement(448059..448889)
location: region:448059-448889:-1
so has part: feature:448059-448889:-1:exon

WP_232012610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448059-448889:-1:exon

VCA1004_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: mtnN
locus tag: VCA1004_RS02165
so part of: sequence
location: complement(448941..449636)
location: region:448941-449636:-1
so has part: feature:448941-449636:-1:exon
subclass of: SO_0000010

position:448941:-1
position: 448941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449636:-1
position: 449636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448941-449636:-1:exon

VCA1004_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: mtnN
locus tag: VCA1004_RS02165
EC number: 3.2.2.16
EC number: 3.2.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011149517.1
GO function: GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO process: GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
translation: MKVGIIGAMEQEVSILKSALIGCQSTTKGGCTFHTGTIHDVEVILLQSGIGKVSASIGTTLLIECFQPDVIINTGSAGGFDSSLNLGDVVISTEVRHHDADVTAFGYEMGQMAGQPAAFTADPTLIDIVEQTLLEMKDTHAVRGLICTGDAFVCTAQQQAFIRQHFPNVIAVEMEASAIAQTCHQFRMPFVVVRAISDVADKESPMSFDEFLPLAAKRSSDMIVNMLTRMK
SIO_010081: VCA1004_RS02165
subclass of: SO_0000673
so part of: VCA1004_RS02165
location: complement(448941..449636)
location: region:448941-449636:-1
so has part: feature:448941-449636:-1:exon

WP_086982209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448941-449636:-1:exon

VCA1004_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02170
so part of: sequence
location: complement(449815..450201)
location: region:449815-450201:-1
so has part: feature:449815-450201:-1:exon
subclass of: SO_0000010

position:449815:-1
position: 449815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450201:-1
position: 450201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449815-450201:-1:exon

VCA1004_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023777.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1499 domain-containing protein
translation: MKKPTPELLCSSKPNCVSTQEIRKDYSIPPFQLISPDTSLDDIERIALTLPRTSTVQKTENSLHLEAKSLILRFVDDLHITKQGNQLQVRSKSRVGYSDFGVNKSRTEALRQKLLEAKLIAPNTAVHH
SIO_010081: VCA1004_RS02170
subclass of: SO_0000673
so part of: VCA1004_RS02170
location: complement(449815..450201)
location: region:449815-450201:-1
so has part: feature:449815-450201:-1:exon

WP_232012611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449815-450201:-1:exon

VCA1004_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02175
so part of: sequence
location: complement(450436..451905)
location: region:450436-451905:-1
so has part: feature:450436-451905:-1:exon
subclass of: SO_0000010

position:450436:-1
position: 450436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451905:-1
position: 451905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450436-451905:-1:exon

VCA1004_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000513717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate synthase subunit beta
translation: MGKPTGFLEHGRELPKKVDPAVRIQDNKEFVLDQEFGSKINTQASRCMDCGVPFCHSGCPIGNIIPEFNDAVYRDSWEEAWHILSSTNNFPEFTGRVCPAPCETACVLGINQDPITICNIEKNIVERAYKEGYAKPRKPRIRTGKSIAIVGSGPAGLAAAEQLNAAGHSVTVFERDEKIGGLLRFGIPDFKLSMEVIDRKLDLMAEAGVKFEVNAHIGVNINAQQLRQEFDVVLLTGGSTVPRDLPIPGRELKGVHFAMEFLGQNNRRANNMDLKGEEIHAKDDHVVVIGGGDTGSDCVGTSNRHGAASITQVEIMPIPPEKRPANQPWPQYPMIMKTTTSHEEGCERHWNILTKEFIGDENGHVKELRIADIVWDEAKPGERPGFKEVEGSERVIPCTKAFLAMGFLHPEPTGVLAQLDIKLDERGNVATNGYATNQKGVFAAGDMRTGQSLVVRCINEGRECAREIDAYLMGNSHLEARADSLMKSA
SIO_010081: VCA1004_RS02175
subclass of: SO_0000673
so part of: VCA1004_RS02175
location: complement(450436..451905)
location: region:450436-451905:-1
so has part: feature:450436-451905:-1:exon

WP_086982211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450436-451905:-1:exon

VCA1004_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: gltB
locus tag: VCA1004_RS02180
so part of: sequence
location: complement(451898..456442)
location: region:451898-456442:-1
so has part: feature:451898-456442:-1:exon
subclass of: SO_0000010

position:451898:-1
position: 451898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456442:-1
position: 456442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451898-456442:-1:exon

VCA1004_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: gltB
locus tag: VCA1004_RS02180
EC number: 1.4.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005369706.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate synthase large subunit
translation: MVSREHSTQGLYTPELEHDACGIGFVAHLKNRKSHAVVTQALDMLARMEHRGGQGCDPCSGDGAGILLQKPHEFLLEEAVKLSIKLPSFEKYGVGVVLFPKDEHKRQQCRDILERNAKRLDLEILGYRVLPVDNSMIGEDPLSTEPQFEHVFISGGPSTEPEELERKLYVLRNYTVRVCLESVSNIGDDFYINSLSYKTLVYKGQLTTDQVPQYFLDLQNPTMVTALALVHSRFSTNTFPRWRLAQPFRYIAHNGEINTVRGNLNWMKAREAILESDLFTKAEIDMLLPICSENGSDSSNFDMALELLVLSGRSLPHALMMLIPEAWQENKNMDPARRAFYQYHANIMEPWDGPASVCFTDGVQVGATLDRNGLRPSRYTVTKDNFLVMASESGAVEIAPENIEYRGRLQPGRIFVADLEQGRIISDEEVKDTIAKAKPYEQWVQDNLLTLKTLPDADNMHHQPSAAKLLQHQQAFGITSEEVNDIIHVLAETGYEPLMSMGADWPLAVLSHQSQHLSHYFKQLFAQVTNPPIDPIRERMVMSLNTYLGRDHNLLTETPEHCRKVELESPVLSNDELEKLRAIDNEHLQAKTLDIVFRATEEPGKLERALKRICQYAEDAVIDGYSIILLTDRATNSNHAAIPAMLAVGAVHHHLIRKGLRAKCDIVIETGDARETHHFATLVGYGANAVNPYLVTETIVDLQKKKKLDPEISTEQYFNNYRKGINAGLLKIFSKMGISTLQSYHGAQIFEALGISKSVVDKYFTGTVSRIQGLTIDDIAREVLIRHRVGYPTREIPIQMLDVGGVYQWKQRGEKHLFNPETISLLQQSTRNKDYSQFKQYAKTVDDQGDNAATLRSQLDFIKNPAGSIPLDEVESIESILKRFATGAMSFGSISYEAHSTLAVAMNRIGAKSNSGEGGEDPIRFEKKANGDWERSAIKQVASGRFGVTSYYLTNADELQIKMAQGAKPGEGGQLPGDKVDDWIGATRHSTPGVGLISPPPHHDIYSIEDLAQLIYDLKNANRDSRVNVKLVSEAGVGTIASGVAKAKADVVLIAGFDGGTGASPMSSIRHTGLPWELGLAETHQTLLKNGLRNRIVVQSDGQMKTPRDLAIATLLGAEEWGVATAALVVEGCIMMRKCHKNTCPVGIATQNKTLRERFDGRVDDVVTFFQYMAEGLREIMAELGFRTIQEMVGQSQKLKVRDDIQHWKYKNLDLSPVLYIQEPRAEDGVYNQKPQNHGLEQVLDRKLIEVAQPALTKGEAVEALFPIINTDRSTGTMLSNEISKVYKDQGLPKPMNVKFTGSAGQSFGAFLAKGVKFEVEGDANDYWGKGLSGGTLVLYPDRRATVVAEDNIVVGNVCFYGATSGESFIRGMAGERFCVRNSGAHVVVEGVGDHGCEYMTGGSAIILGSTGRNFAAGMSGGVAYVWDKEGDFNTKLNPELVDVDPIEAEDKTFIKEMLTKHVEYTGSTVAQAFLADFDNNLSRLAKVMPRDYKAVLQKRKQAANKEELEAVNG
SIO_010081: VCA1004_RS02180
subclass of: SO_0000673
so part of: VCA1004_RS02180
location: complement(451898..456442)
location: region:451898-456442:-1
so has part: feature:451898-456442:-1:exon

WP_086982212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451898-456442:-1:exon

VCA1004_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: arcB
locus tag: VCA1004_RS02185
so part of: sequence
location: 457122..459533
location: region:457122-459533:1
so has part: feature:457122-459533:1:exon
subclass of: SO_0000010

position:457122:1
position: 457122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459533:1
position: 459533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457122-459533:1:exon

VCA1004_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: arcB
locus tag: VCA1004_RS02185
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006072899.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aerobic respiration two-component sensor histidine kinase ArcB
translation: MKLIKKLAQYYVDLLVKLGMVRFSMLLALAFVCFSVLLQAVVSMIWLGEVENIVIIRSIFFGILITPWAVYFLTVVVDQLEESRQRLSKMVEKLKNMRQRDHELNLELQQNIHKLNQQIAERVKAEAARLEMMQDLKNEVYQREKTQVELAERTALLRSFLDSSPDLIYYRNTEGVFSGCNKAFEELTGLTENELVGLSIYDVYKDIHTLHQIEITDKEVFDSNRELAYDIWLEYPNGEKAYFEFRKLPFYNKSKQLLGLVGFGRNITDRKAYQDALVKASQDKTTFISTISHELRTPLNGIVGLSRILLDSKLDQEQRQYMQTINISAITLGHIFNDVIDLDKLDRTQLELLPTDTDFQSFISDIETISGLMAEQKGLSFELDRLTELPTAISVDATRLRQVLWNLLNNAMKFTKEGGVTVNVSADFDDQFADIIFEIEDTGIGIPESEIDNIFGMYYQVKSGKDNLHAVGTGIGLAVSKEFARRMGGDITVTSELGFGCTFTVSIHVPIAHLPDVTDKVKTQKSLRIFMVEDIALNITVARSVLENLGHTVEIAMSGEEALEKFAPEQFDLVFLDIQLPDMTGFDIAQQLRKQYTDLPPLVALTANLLKNKQEYIDKGMDDAISKPLSVKDIYQVINKFSPSLPSRDAVSSQLIVEEKKESEPVSECQNSTNQPQQLTPSDEIIDQDMLLMYLEIVGTQAVLDSVAMFERAMPEYMTLLNQYLQDKDDDNLVSEAHKIKGAAGSVGLQRIQALAQLAQTPESPQWREKVASWVASIERYYQQDIELLKQWIQQQKMSKKSQ
SIO_010081: VCA1004_RS02185
subclass of: SO_0000673
so part of: VCA1004_RS02185
location: 457122..459533
location: region:457122-459533:1
so has part: feature:457122-459533:1:exon

WP_086982213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457122-459533:1:exon

VCA1004_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: arcA
locus tag: VCA1004_RS02190
so part of: sequence
location: complement(459613..460329)
location: region:459613-460329:-1
so has part: feature:459613-460329:-1:exon
subclass of: SO_0000010

position:459613:-1
position: 459613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460329:-1
position: 460329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459613-460329:-1:exon

VCA1004_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: arcA
locus tag: VCA1004_RS02190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005599232.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two-component system response regulator ArcA
translation: MHTPQILIVEDEQVTRNTLKTIFEAEGYTVFEAIDGDTMHQILSENPINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLHRSMSQGDAQEEKRVVEKYEFNGWTLDINSRSLINPMGDSYKLPRSEFRALLHFCENPGKIQTRADLLKKMTGRELKPHDRTVDVTIRRIRKHFESVADTPEIIATIHGEGYRFCGDLAE
SIO_010081: VCA1004_RS02190
subclass of: SO_0000673
so part of: VCA1004_RS02190
location: complement(459613..460329)
location: region:459613-460329:-1
so has part: feature:459613-460329:-1:exon

WP_086982214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459613-460329:-1:exon

VCA1004_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02195
so part of: sequence
location: complement(461237..462082)
location: region:461237-462082:-1
so has part: feature:461237-462082:-1:exon
subclass of: SO_0000010

position:461237:-1
position: 461237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462082:-1
position: 462082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461237-462082:-1:exon

VCA1004_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02195
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MTVQALKHQHKIQHLLQSIGLPKSVYYYQCQVLSTPEPYANEIASIERIFHKHKGRYGYRRIHYALRREGIYLNHKTVQRLMAKLGLKSTVRPKKYRSYKGAIGRIAPNILKRDFKSTKPNEKWVTDVTEFKVAGEKVYLSPIIDLFNQEVVSHTVASSPKLHLVTEMLEKATSKLSQASSLTLHSDQGWQYQHRDYRNKLKEKRINQSMSRKGNCLDNAVAENFFALLKTEMYHGYHFDSAEQLMACIDEYIDYYNNDRIKVKLKGLTPVEYRNQALEAA
SIO_010081: VCA1004_RS02195
subclass of: SO_0000673
so part of: VCA1004_RS02195
location: complement(461237..462082)
location: region:461237-462082:-1
so has part: feature:461237-462082:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461237-462082:-1:exon

VCA1004_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02200
so part of: sequence
location: complement(462079..462588)
location: region:462079-462588:-1
so has part: feature:462079-462588:-1:exon
subclass of: SO_0000010

position:462079:-1
position: 462079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462588:-1
position: 462588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462079-462588:-1:exon

VCA1004_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017081915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSKYIRELKLCIAQRCLDGESSTSLAKELSIPANQIRYWTSVYRIHGSSSFLPLDYENSADFKFSVLKSMWENNWSISQASAEFNFSSNGTISVWLKLYNQSGFQGLHSRPKGRPSMKTQSNKRPTKPDEDMSLDELREELAYLRAENAVLKKLEELDKLKRQAAKKKR
SIO_010081: VCA1004_RS02200
subclass of: SO_0000673
so part of: VCA1004_RS02200
location: complement(462079..462588)
location: region:462079-462588:-1
so has part: feature:462079-462588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462079-462588:-1:exon

VCA1004_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: thrA
locus tag: VCA1004_RS02205
so part of: sequence
location: 462689..465148
location: region:462689-465148:1
so has part: feature:462689-465148:1:exon
subclass of: SO_0000010

position:462689:1
position: 462689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465148:1
position: 465148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462689-465148:1:exon

VCA1004_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: thrA
locus tag: VCA1004_RS02205
EC number: 1.1.1.3
EC number: 2.7.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001264657.1
GO function: GO:0004072 - aspartate kinase activity [Evidence IEA]; GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO process: GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009067 - aspartate family amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional aspartate kinase/homoserine dehydrogenase I
translation: MRVLKFGGSSLADADRFLRAADIIINNAQQQEVAVVLSAPGKTTNKLVAVIESTLKNGEAELLINELEQSFYDLFAHIKLQVPELESTAFDHQVNTSIKKLRQYVHGMALLGMCPDHVNARIISKGERISIQLMKAVVEAKGKPVNLIDPVSYLLAKGDHLEAMVDVDISTVNFQQYPLPQGHINIMPGFTAGNAKGELVTLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYNCDPRLVEDARLLKSLSYQEAMELSYFGASVLHPKTIAPIAQFQIPCLIKNSFNPQGAGTLIGQDTGEDNLAIKGITTLSQLTMVNVSGPGMKGMVGMASRVFGAMSTSGVSIVLITQSSSEYSISFCIESQDKFKAELALQDAFELELKDGLLDPIEFTDDVAIVTLVGDKMRTSRGVAAQFFASLAEVNVNVVAIAQGSSERAISAVIPEDRVSVAIKACHENLFNSKHFLDVFVVGIGGVGGELVDQFQRQQAKLAEKGIVIRVCGLANSKGLLLDSEGLPLENWRDRMSHATEEFSLARMIALVQRNHIINPVLVDCTSSEAIANQYTDFLAAGFHVVTPNKKANTASMSYYHQLREIARSTRRKLMYETTVGAGLPVIENLQNLISAGDELEKFNGILSGSLSYIFGKLDEGMSLSQATNIAKENGFTEPDPRDDLSGMDVARKLLILAREAGMELELDDVVVEQALPPGFDDSGSVEEFMARLPEADAYFAALSKQAAEEGKVLRYVGSIDEGQCKVKMIAVDENDPMFKIKDGENALAFYSRYYQPIPLVLRGYGAGTQVTAAGVFSDVMRTLGWKLGV
SIO_010081: VCA1004_RS02205
subclass of: SO_0000673
so part of: VCA1004_RS02205
location: 462689..465148
location: region:462689-465148:1
so has part: feature:462689-465148:1:exon

WP_086982216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462689-465148:1:exon

VCA1004_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: thrB
locus tag: VCA1004_RS02210
so part of: sequence
location: 465150..466133
location: region:465150-466133:1
so has part: feature:465150-466133:1:exon
subclass of: SO_0000010

position:465150:1
position: 465150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466133:1
position: 466133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465150-466133:1:exon

VCA1004_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: thrB
locus tag: VCA1004_RS02210
EC number: 2.7.1.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023769.1
GO function: GO:0004413 - homoserine kinase activity [Evidence IEA]
GO process: GO:0009088 - threonine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homoserine kinase
translation: MSLSQSNQPQSVAVYAPASIGNVSVGFDVLGAAVSPIDGSLLGDRVLVASGVTPFELKTAGRFVSKLPADPKDNIVYDCWVVFARELEKKNIPLLPLEMTLEKNMPIGSGLGSSACSIVAALDALNRFHGEPLNEMALLALMGEMEGNISGGIHYDNVAPCYLGGLQLMLEELGIISQEVPCFDEWYWVMAYPGIKVSTAEARAILPSQYRRQDIIAHGRHLGGFIHACHSAQPELAAKLIKDVIAEPYREKLLPGFAEARKYAMSAGALACGISGSGPTLFTICSKKEVAERVACWLNEHYIQNEEGFVHICRLDKEGSRVTGSEL
SIO_010081: VCA1004_RS02210
subclass of: SO_0000673
so part of: VCA1004_RS02210
location: 465150..466133
location: region:465150-466133:1
so has part: feature:465150-466133:1:exon

WP_086982217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465150-466133:1:exon

VCA1004_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: thrC
locus tag: VCA1004_RS02215
so part of: sequence
location: 466130..467419
location: region:466130-467419:1
so has part: feature:466130-467419:1:exon
subclass of: SO_0000010

position:466130:1
position: 466130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467419:1
position: 467419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466130-467419:1:exon

VCA1004_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: thrC
locus tag: VCA1004_RS02215
EC number: 4.2.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019275499.1
GO function: GO:0004795 - threonine synthase activity [Evidence IEA]
GO process: GO:0009088 - threonine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine synthase
translation: MKLYNIKENDQQVSFGQAVRQGLGRNQGLFFPSELPQFDDIDALLAEDFVSRSSKILSALIGDELSAEQVNQLVAAAFQFPAPIKSVKDDVYALELFHGPTLAFKDFGGRFMAQSLAAVTSDKNEKITILTATSGDTGAAVAHAFYGLENINVVILYPKGKISPLQEKLFCTLGGNIHTVAIDGDFDACQALVKQAFDDQTLREEIGLNSANSINISRLMAQICYYFEAAAQMSKAERENLVVSVPSGNFGNLTAGLLAKALGLPIKRFIAATNANDTVPRYLETGKWDPKPTVATTSNAMDVSQPNNWPRIEELCRIKGWGLDTLGKGMVTDDQSAASVVELNELGYLCEPHGAIAYRLLNEQLQPGETGLFLCTAHPAKFKEVVDEILGSDIDVPGPLAKHGAMELLSEDLAADFDLLKAVLRKVQR
SIO_010081: VCA1004_RS02215
subclass of: SO_0000673
so part of: VCA1004_RS02215
location: 466130..467419
location: region:466130-467419:1
so has part: feature:466130-467419:1:exon

WP_086982218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466130-467419:1:exon

VCA1004_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: grcA
locus tag: VCA1004_RS02220
so part of: sequence
location: complement(467584..467961)
location: region:467584-467961:-1
so has part: feature:467584-467961:-1:exon
subclass of: SO_0000010

position:467584:-1
position: 467584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467961:-1
position: 467961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467584-467961:-1:exon

VCA1004_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: grcA
locus tag: VCA1004_RS02220
inference: COORDINATES: similar to AA sequence:RefSeq:NP_311472.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autonomous glycyl radical cofactor GrcA
translation: MIQGIQITKAANDDLLNSIWLLDSEKNEARCVAAEAGFEADQVVAVDSLGDIEYREVKIETAPRVEGGQHLNVNVLSRETLEDAVAHPENYPQLTIRVSGYAVRFNSLTAEQQRDVIARTFTESM
SIO_010081: VCA1004_RS02220
subclass of: SO_0000673
so part of: VCA1004_RS02220
location: complement(467584..467961)
location: region:467584-467961:-1
so has part: feature:467584-467961:-1:exon

WP_086982219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467584-467961:-1:exon

VCA1004_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ung
locus tag: VCA1004_RS02225
so part of: sequence
location: 468291..468986
location: region:468291-468986:1
so has part: feature:468291-468986:1:exon
subclass of: SO_0000010

position:468291:1
position: 468291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468986:1
position: 468986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468291-468986:1:exon

VCA1004_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ung
locus tag: VCA1004_RS02225
EC number: 3.2.2.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008077377.1
GO function: GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MLIWEDIIAKEQQQAYFKSLQQFVENERAQGKNIYPPQEWVFSAFEQTPFEQVKVVILGQDPYHGPHQAHGLSFSVQPGIKTPPSLKNMYKELAQDIDDFVIPKHGHLVSWAQQGVLLLNTVLTVEQGKAHSHAKAGWERFTDQVISELNHHHSGLIFLLWGAHAQKKGAGIDTTKHHVLHAPHPSPLSAHRGFFGCQHFSQTNQLLKQQQKQPIDWTSVCLDMNEQIALL
SIO_010081: VCA1004_RS02225
subclass of: SO_0000673
so part of: VCA1004_RS02225
location: 468291..468986
location: region:468291-468986:1
so has part: feature:468291-468986:1:exon

WP_086982220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468291-468986:1:exon

VCA1004_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02230
so part of: sequence
location: 469102..469632
location: region:469102-469632:1
so has part: feature:469102-469632:1:exon
subclass of: SO_0000010

position:469102:1
position: 469102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469632:1
position: 469632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469102-469632:1:exon

VCA1004_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017243573.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemerythrin domain-containing protein
translation: MIGDIISREHSYMVRLLVILDQKLNSLKQGEVVNYLIINDIISYLQRHSELTHHPKEDLIYQYFLDHYGQEASIANLSLEHKKLGKTTEEFADLLAMVLQDAVVPHEVFTEYLANFIHQQKKHLDFEEREILPALKQRFTEKDWQQVEILWGNEDVDPLFGQNIEQEYQRLSKYLK
SIO_010081: VCA1004_RS02230
subclass of: SO_0000673
so part of: VCA1004_RS02230
location: 469102..469632
location: region:469102-469632:1
so has part: feature:469102-469632:1:exon

WP_086982221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469102-469632:1:exon

VCA1004_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02235
so part of: sequence
location: complement(469702..469887)
location: region:469702-469887:-1
so has part: feature:469702-469887:-1:exon
subclass of: SO_0000010

position:469702:-1
position: 469702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469887:-1
position: 469887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469702-469887:-1:exon

VCA1004_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023764.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3545 family protein
translation: MESFQLDNIMEMEPNLYRSNKTKPTKRRWREIEAIQDKRQLQKELKELDYLGEYKLEDIDF
SIO_010081: VCA1004_RS02235
subclass of: SO_0000673
so part of: VCA1004_RS02235
location: complement(469702..469887)
location: region:469702-469887:-1
so has part: feature:469702-469887:-1:exon

WP_086982222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469702-469887:-1:exon

VCA1004_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02240
so part of: sequence
location: 470586..472013
location: region:470586-472013:1
so has part: feature:470586-472013:1:exon
subclass of: SO_0000010

position:470586:1
position: 470586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472013:1
position: 472013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470586-472013:1:exon

VCA1004_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006880621.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:alanine symporter family protein
translation: MTDLIALLNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFSVLKNSRKADESGISSFQAFCTSLAARVGTGNMAGVAVALTVGGPGAIFWMWLIAMMGMATAFAESTLAQLYKTKGSDGNYIGGPAYYMEKGLGMRWMGVLFSVFLIIAFGLVFNAVQSNSIADAMYTAFNWNKTIVGGVLVVLSGFVIFGGIRKIARTAEVLVPIMAIFYLLLAVIVIAMNLEKVPGALALIFKSAFGLQEAAAGGVGYAVMNAIKTGVARGLFSNEAGMGSAPNAAAAATPYPPHPASQGYVQMLGVFVDTIVICTATVSIILLSGEYVPHGEVTGIILTQNALSSQVGEWGKTFVAIAIFFFAFTSIIANYSYAEGNILFIFKKARHAKNIFRVIVLAMVMFGSMATLPTVWSLADASMGLMAIVNLVAILLLSGIVIKLAKDYNKQLDEGKLPTFHAEDFPELHSQIEEGVWGKKED
SIO_010081: VCA1004_RS02240
subclass of: SO_0000673
so part of: VCA1004_RS02240
location: 470586..472013
location: region:470586-472013:1
so has part: feature:470586-472013:1:exon

WP_086982223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470586-472013:1:exon

VCA1004_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: yaaA
locus tag: VCA1004_RS02245
so part of: sequence
location: 472112..472888
location: region:472112-472888:1
so has part: feature:472112-472888:1:exon
subclass of: SO_0000010

position:472112:1
position: 472112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472888:1
position: 472888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472112-472888:1:exon

VCA1004_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: yaaA
locus tag: VCA1004_RS02245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012603257.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxide stress protein YaaA
translation: MLILVSPAKTLDYESPLPTTEHTLPELTEHSAELIEVCRQLTPQDIASLMKVSDKIAGLNVARFAQWSPQFSLENARQALFAFKGDVYTGLEAESLSDEDIHYAQAHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANSRGSNLYQFWGDIVTNKVNEALQQQGDDYLVNLASNEYFKSVKPAKIQGNIITPVFKDCKNGTYKVISFYAKKARGMMARYIIENKVDSLDKLKAFDSAGYFFVAAESTDTELVFKREEQH
SIO_010081: VCA1004_RS02245
subclass of: SO_0000673
so part of: VCA1004_RS02245
location: 472112..472888
location: region:472112-472888:1
so has part: feature:472112-472888:1:exon

WP_086982224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472112-472888:1:exon

VCA1004_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: srmB
locus tag: VCA1004_RS02250
so part of: sequence
location: complement(473258..474490)
location: region:473258-474490:-1
so has part: feature:473258-474490:-1:exon
subclass of: SO_0000010

position:473258:-1
position: 473258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474490:-1
position: 474490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473258-474490:-1:exon

VCA1004_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: srmB
locus tag: VCA1004_RS02250
EC number: 3.6.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009844005.1
GO function: GO:0003724 - RNA helicase activity [Evidence IEA]
GO process: GO:0000027 - ribosomal large subunit assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase SrmB
translation: MIRTFAELDLDQNLIEAIEQMGFERPTQIQADAIPQALDGKDVLASAPTGTGKTAAFVLPALQYLQDFPRKKAGPARVLILTPTRELAMQVADQARALAKNTNLNIFTITGGVMYQEHADILGTTQDIVVATPGRLMEYIEAERFDCRAIEWLILDEADRMLDMGFGPVVDRLSAECRWRKQTLLFSATLEGKGVEGFTEDLLKNPVKIEADPSRRERKKITQWYHRADNAEHKLALLKAILSDQAERSIIFVKTRERLAELRGQLESVQIVCSWIQGEMPQDRRNNAIQRFRDGEVNVLIATDVAARGIDLPDVSHVINYDMPRTADVYLHRIGRTARAGKKGNAISIIEAHDQPMIERVMRYTKDEIKERYIKDLRPKAKKPTFKKKKKKSAETKKKSNVKKKTGKKK
SIO_010081: VCA1004_RS02250
subclass of: SO_0000673
so part of: VCA1004_RS02250
location: complement(473258..474490)
location: region:473258-474490:-1
so has part: feature:473258-474490:-1:exon

WP_086982225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473258-474490:-1:exon

VCA1004_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02255
so part of: sequence
location: complement(474623..475333)
location: region:474623-475333:-1
so has part: feature:474623-475333:-1:exon
subclass of: SO_0000010

position:474623:-1
position: 474623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475333:-1
position: 475333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474623-475333:-1:exon

VCA1004_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004744873.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase
translation: MKQTKDFHLKQFSIYGGQSGMAVSTDGIVLGAWAGITEHSRILDIGTGTGLLSLMCAQRTQHATITALDIDDDAIQAASINIQNSPWSSRITLEHIAVQAFTPPETFDHIICNPPYFNSGVTSNWQARATARHTHNLSHLELLTACQRLLKHEGGASFILPNAEGVEFIAMAQQQGWFVEQLCQVNTTQRKPAYRLLFTLVRYPTETQQTQLTIRQDNHYTAEFINLTRDFYLKMS
SIO_010081: VCA1004_RS02255
subclass of: SO_0000673
so part of: VCA1004_RS02255
location: complement(474623..475333)
location: region:474623-475333:-1
so has part: feature:474623-475333:-1:exon

WP_086982226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474623-475333:-1:exon

VCA1004_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: brnQ
locus tag: VCA1004_RS02260
so part of: sequence
location: 475614..476936
location: region:475614-476936:1
so has part: feature:475614-476936:1:exon
subclass of: SO_0000010

position:475614:1
position: 475614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476936:1
position: 476936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475614-476936:1:exon

VCA1004_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: brnQ
locus tag: VCA1004_RS02260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078620.1
GO function: GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO process: GO:0015803 - branched-chain amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid transport system II carrier protein
translation: MNQKLKITDILALGFMLFAFFLGAGNIIFPPLAGQLAGEEVLPTMLGFLSTAVGLPLLGIIAIALVGGGWDKLTQDLPKTAATIVAVLFFIIIGPAFAAPRTGLVAYEMGLKPFIAEPSQIHLTIFSITFFVIASMFAWSQGKLLDVIGKVLTPVLFLGLLVLSVMVFVEPQGEIAAAQASYLTQPFSTGFLDGYNTMDTFASLMFGTLVIEALRTKKITEKRAITRYVIFAAFIAAGGLALVYVSLFYLGATSSTIAAGLDNGGAILSVYVQALFGTEGQLVLTTIVLLACLTTSIGLISACADYFSSLCSVGYKAWVVIVGAVCALVANVGLTQLIALSVPVLFALYPVAIAIVLLTLVRSRLPNRPLAYRVVVCVSLLFALIDAAKALSIDTSAFTFLPLYDYGMAWMLPTVIAIAAMLVVPKAQARQSEELVEDIA
SIO_010081: VCA1004_RS02260
subclass of: SO_0000673
so part of: VCA1004_RS02260
location: 475614..476936
location: region:475614-476936:1
so has part: feature:475614-476936:1:exon

WP_086982227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475614-476936:1:exon

VCA1004_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fldB
locus tag: VCA1004_RS02265
so part of: sequence
location: complement(477094..477612)
location: region:477094-477612:-1
so has part: feature:477094-477612:-1:exon
subclass of: SO_0000010

position:477094:-1
position: 477094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477612:-1
position: 477612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477094-477612:-1:exon

VCA1004_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fldB
locus tag: VCA1004_RS02265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013857680.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavodoxin FldB
translation: MKIGLFYGSSTCYTEMVSEKIRAIIGEELVDIYNIKDTPVAAMQDYDFLILGISTWDFGEIQEDWSAVWQQIDGLSLNGKYVALFGLGDQEGYGEWFLDAMGMLHDELTPTGVNFIGYWPNQGYQFEKSKALTADNSHFVGLALDEDSQYELTDERLDAWCEQILVQYYDAM
SIO_010081: VCA1004_RS02265
subclass of: SO_0000673
so part of: VCA1004_RS02265
location: complement(477094..477612)
location: region:477094-477612:-1
so has part: feature:477094-477612:-1:exon

WP_086982228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477094-477612:-1:exon

VCA1004_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: xerD
locus tag: VCA1004_RS02270
so part of: sequence
location: 477817..478725
location: region:477817-478725:1
so has part: feature:477817-478725:1:exon
subclass of: SO_0000010

position:477817:1
position: 477817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478725:1
position: 478725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477817-478725:1:exon

VCA1004_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: xerD
locus tag: VCA1004_RS02270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005459400.1
GO function: GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific tyrosine recombinase XerD
translation: MVAVKQSELSFVERFLDAIWLERGLSENTLQSYRHDLDKLIHWLQDKSVSVLEVTTFDLQAYQAWLVEKEFKQTSRARMLSAIRRFFQYLTREKLRTDDPSALLIAPKLPKRLPKDLSEQQVDALLAAPIVEDPLELRDKAMLELLYATGLRVTELISLTMENMSLRQGVVRVMGKGGKERLVPMGEDAIEWIETYLEQGRPALLGEKSSDVVFPSKRGQQMTRQTFWHRIKFYAQHAGIDSDALSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQIHQEHHPRA
SIO_010081: VCA1004_RS02270
subclass of: SO_0000673
so part of: VCA1004_RS02270
location: 477817..478725
location: region:477817-478725:1
so has part: feature:477817-478725:1:exon

WP_086982229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477817-478725:1:exon

VCA1004_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: dsbC
locus tag: VCA1004_RS02275
so part of: sequence
location: 478753..479517
location: region:478753-479517:1
so has part: feature:478753-479517:1:exon
subclass of: SO_0000010

position:478753:1
position: 478753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479517:1
position: 479517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478753-479517:1:exon

VCA1004_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: dsbC
locus tag: VCA1004_RS02275
EC number: 5.3.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023755.1
GO component: GO:0042597 - periplasmic space [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional protein-disulfide isomerase/oxidoreductase DsbC
translation: MHLFSFAKAMRRRFVLFQGLLACLVAVVSVSSHAAEANKDEISARFINLGIMVMDVAASPIDGLYEVTTNQGLFYASENGDFFIQGKMYSLDKQGNFTDLLAKKYAKQVEKFTDDMIIYKAKDEKYVVTVFTDITCGYCVKLHKEMQKYNDAGITVRYMAYPRQGPRGEVADAMAKVWCADDRKQALDDVKLNRNFDFNSKHLPQCQQMIVDQYAFGAQLGINGTPAILLSNGRLVGGYLPADKLLEALKAENL
SIO_010081: VCA1004_RS02275
subclass of: SO_0000673
so part of: VCA1004_RS02275
location: 478753..479517
location: region:478753-479517:1
so has part: feature:478753-479517:1:exon

WP_232012612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478753-479517:1:exon

VCA1004_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: yqfB
locus tag: VCA1004_RS02280
so part of: sequence
location: 479547..479846
location: region:479547-479846:1
so has part: feature:479547-479846:1:exon
subclass of: SO_0000010

position:479547:1
position: 479547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479846:1
position: 479846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479547-479846:1:exon

VCA1004_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: yqfB
locus tag: VCA1004_RS02280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016800756.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N(4)-acetylcytidine aminohydrolase
translation: MTFFARFEADIVAGKKTITIRDEADSHYAPGSIVSVSTQEQGRVFCRLKICSVTPIHFSELNEYHAQQENMTLPQLQAVIQEIYPGQQSLYLIEYQLQA
SIO_010081: VCA1004_RS02280
subclass of: SO_0000673
so part of: VCA1004_RS02280
location: 479547..479846
location: region:479547-479846:1
so has part: feature:479547-479846:1:exon

WP_232012632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479547-479846:1:exon

VCA1004_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: recJ
locus tag: VCA1004_RS02285
so part of: sequence
location: 479948..481717
location: region:479948-481717:1
so has part: feature:479948-481717:1:exon
subclass of: SO_0000010

position:479948:1
position: 479948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481717:1
position: 481717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479948-481717:1:exon

VCA1004_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: recJ
locus tag: VCA1004_RS02285
EC number: 3.1.11.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000570143.1
GO function: GO:0008409 - 5'-3' exonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded-DNA-specific exonuclease RecJ
translation: MTTILRRPDVDLTLLPESIPALLRRIYINRNISDVGQLEKGAKGLHSYQALHGISHAVTLLFQAIKDQQRIIVVGDFDADGATSSALSVLAIRMLGSHNVDYLVPNRFEDGYGLSPEVVEQAIARGAQVIMTVDNGVSSIEGVKFAKQHGLTVIVTDHHLPGSVLPEADAMVNPNLQQCAFPSKALAGVGVAFYLMLALRAEMRAQGWFTQQQIPEPNLAELLDLVALGTVADVVALDDNNRILVHQGLQRIRAGKARPGIQALIEVSKRDAKRLVAADFGFALGPRINAAGRLEDMSFGVELLLCNNIHAARRMANELDGLNHMRREIEQGMKQEAMAFCERILNAGGDLSDTSSLPYGLTLFQADWHQGVIGILASRIKDEFHRPVIAFADGGELADGQASLKGSCRSIPGLHMRDVLDKIDTLYPGIIVKFGGHAMAAGLTIYQNKYQEFSQLFDLAVREELDESALEGVVLSDGELTPEEFSMHTAELLRAGGPWGQAFPEPVFDGDFKLLHQKLVGEKHLKLMLEPLFKGHPTGIMVDGIAFNVDLRRWPDASVKTVHLAYKLDINEFRGNQSLQLMVEYLEAK
SIO_010081: VCA1004_RS02285
subclass of: SO_0000673
so part of: VCA1004_RS02285
location: 479948..481717
location: region:479948-481717:1
so has part: feature:479948-481717:1:exon

WP_086982231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479948-481717:1:exon

VCA1004_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: prfB
locus tag: VCA1004_RS02290
so part of: sequence
location: 481921..483019
location: region:481921-483019:1
so has part: feature:481921-483019:1:exon
subclass of: SO_0000010

position:481921:1
position: 481921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483019:1
position: 483019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481921-483019:1:exon

VCA1004_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: prfB
locus tag: VCA1004_RS02290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010895430.1
ribosomal slippage: true
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 2
translation: MFEINPIKNRLQDVAERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSALEAVVETIDQLDQGCDDVEGLLELAVEEQDQETFDEIEPELAELEAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGDVAGLKGATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDDNIEIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFEFELQKQNAEKQANEDSKSDIGWGSQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFIEASLKSGL
SIO_010081: VCA1004_RS02290
subclass of: SO_0000673
so part of: VCA1004_RS02290
location: join(481921..481995,481997..483019)
location: region:481921-483019:1
so has part: feature:481921-481995:1:exon
so has part: feature:481997-483019:1:exon

WP_126000517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481921-481995:1:exon

position:481995:1
position: 481995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:481997-483019:1:exon

position:481997:1
position: 481997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VCA1004_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: lysS
locus tag: VCA1004_RS02295
so part of: sequence
location: 483124..484647
location: region:483124-484647:1
so has part: feature:483124-484647:1:exon
subclass of: SO_0000010

position:483124:1
position: 483124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484647:1
position: 484647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483124-484647:1:exon

VCA1004_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: lysS
locus tag: VCA1004_RS02295
EC number: 6.1.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017043263.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine--tRNA ligase
translation: MTESNSQHQIDAVEENKLIAERRAKLDHIRQSCKANGHPNDFRREHLAGDLQAEFGEKSKQELEELNHIVAIAGRVMAKRGPFLVLQETSGRIQAYAAKDVQKELKEKYQGLDIGDIIGVKGALHKSGKGDLYVNMESYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRTAFIIRSKLVMAIRNFMAKKGFLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGFDRVFEVNRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSTVAVEVLGNTAMPYGDEMVEFGGQYARMSMLEAIKHYNPDHADIQALTEEGVKDRDLMVKIAKSVHVEVESFWTCGQLLEEIFGETAEPKLIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPAMRPQQ
SIO_010081: VCA1004_RS02295
subclass of: SO_0000673
so part of: VCA1004_RS02295
location: 483124..484647
location: region:483124-484647:1
so has part: feature:483124-484647:1:exon

WP_086982232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483124-484647:1:exon

VCA1004_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02300
so part of: sequence
location: 484867..486198
location: region:484867-486198:1
so has part: feature:484867-486198:1:exon
subclass of: SO_0000010

position:484867:1
position: 484867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486198:1
position: 486198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484867-486198:1:exon

VCA1004_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012533698.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VpsR-related response regulator
translation: MMNQFRMDSIPGSLLIIGGRHETWYDNLTLAGWKVEQCTDLRQGQSMIERIGPCIGLVDLTHDNFSLSAIAYLANNNKHVRWMAYINEHQLNRDPICQFIVHYCTDFFSAPMPVKLLLSSIGHQLGMLKLEKKVWPDCVMDKQARLVGDSLSMKRLKEQIQRIAPTETSVIISGERGVGKSLVAKLVHEASGRNKGPFVVVCASALSEKRFEKEVFGIGRESHQTDFVTKLEEAHEGTLLIKDIGALAMSQQNHLLQFIHYPAIPTSKGEKVINTRILATTYNDLEQSVKDKEFSSDLLYLLKILKINMTPLKERASDISALANYYLVQFSREYSSQVRSISRQALTMLVQYHWPGNVRELVNQMKRAVLMCEGTILEPDHFDLPTQNQHVRSLKVIRENSEREALIQALETYHGQVALAAKELKISRATMYRLLSKYKIIAD
SIO_010081: VCA1004_RS02300
subclass of: SO_0000673
so part of: VCA1004_RS02300
location: 484867..486198
location: region:484867-486198:1
so has part: feature:484867-486198:1:exon

WP_086982233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484867-486198:1:exon

VCA1004_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02305
so part of: sequence
location: complement(486267..487301)
location: region:486267-487301:-1
so has part: feature:486267-487301:-1:exon
subclass of: SO_0000010

position:486267:-1
position: 486267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487301:-1
position: 487301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486267-487301:-1:exon

VCA1004_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020196725.1
GO function: GO:0047834 - D-threo-aldose 1-dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP(H)-dependent aldo-keto reductase
translation: MKYHKIPHSTLEVSQIALGTMTYGEQNTQAEACHQLDYALERGINLIDTAEMYPVPAKPETQGLTEQYLGHWIKKSGKREKIILASKVTGPGRLSHIRDHISLDRRNIHLAIDSSLQRLNTDYLDLYQIHWPQRQTNCFGQLNYPYIDEQQEVTLIETLEALAELVKAGKTRYIGVSNETPWGLMTLLRLAEKHDLPRVISIQNPYSLLNRSFEVGLSEISHHEGVELLAYSPLAFGTLTGKYLNNQRPAGSRCQLFERFVRYFTPQGIEATQAYIDIAHQHGLDPAQMALAFVNQRPFVASTIIGATNMQQLEANINSIDTILSDEVLRDLYEVGVKYSNPCP
SIO_010081: VCA1004_RS02305
subclass of: SO_0000673
so part of: VCA1004_RS02305
location: complement(486267..487301)
location: region:486267-487301:-1
so has part: feature:486267-487301:-1:exon

WP_086982234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486267-487301:-1:exon

VCA1004_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02310
so part of: sequence
location: 487460..487768
location: region:487460-487768:1
so has part: feature:487460-487768:1:exon
subclass of: SO_0000010

position:487460:1
position: 487460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487768:1
position: 487768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487460-487768:1:exon

VCA1004_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023746.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6482 family protein
translation: MKKQQLDHWLQASQKEHIEPPKVFVVSCADLSQYSLAVEYKHRLEPITEQDRLAYFNSIESVKEELKKLGFTSAYLRLHNAYDECGAEESALFQDIKLHLAS
SIO_010081: VCA1004_RS02310
subclass of: SO_0000673
so part of: VCA1004_RS02310
location: 487460..487768
location: region:487460-487768:1
so has part: feature:487460-487768:1:exon

WP_086982235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487460-487768:1:exon

VCA1004_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: mutH
locus tag: VCA1004_RS02315
so part of: sequence
location: complement(487814..488485)
location: region:487814-488485:-1
so has part: feature:487814-488485:-1:exon
subclass of: SO_0000010

position:487814:-1
position: 487814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488485:-1
position: 488485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487814-488485:-1:exon

VCA1004_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: mutH
locus tag: VCA1004_RS02315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010445985.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair endonuclease MutH
translation: MPLLPQTEFELMQRANQLVGQSFACLASMAGIAVPANLKREKGWVGQLIEWHLGAESGSKAQPDFEHLGIELKTIPISFTGKPLETTFVSVAPLTGVHGLTWENSHVKHKLAKVLWVPVEGEREIPLAERRVGRPLLWSPSPAEELLLKQDWEELMEFIVLGKVEQITAKHGAVMQLRPKAANSKVVTEAYSSAGQPIKTLPRGFYLRTQFTAEILMRHLNLN
SIO_010081: VCA1004_RS02315
subclass of: SO_0000673
so part of: VCA1004_RS02315
location: complement(487814..488485)
location: region:487814-488485:-1
so has part: feature:487814-488485:-1:exon

WP_086984608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487814-488485:-1:exon

VCA1004_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rppH
locus tag: VCA1004_RS02320
so part of: sequence
location: 489079..489594
location: region:489079-489594:1
so has part: feature:489079-489594:1:exon
subclass of: SO_0000010

position:489079:1
position: 489079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489594:1
position: 489594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489079-489594:1:exon

VCA1004_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rppH
locus tag: VCA1004_RS02320
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023744.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA pyrophosphohydrolase
translation: MIDGDGYRLNVGIVICNNHGQVFWAKRYGQHSWQFPQGGIDDGETPEQALFRELYEEVGLTKNDVKIIGVSRHWLKYKLPKRLVRWDSKPVCIGQKQKWFLLRLECDESNINMNRGRTPEFDGWRWVSFWYPVRQVVSFKRDVYRRAMKEFASIAMPFREPKIKGKRKMRR
SIO_010081: VCA1004_RS02320
subclass of: SO_0000673
so part of: VCA1004_RS02320
location: 489079..489594
location: region:489079-489594:1
so has part: feature:489079-489594:1:exon

WP_086982236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489079-489594:1:exon

VCA1004_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ptsP
locus tag: VCA1004_RS02325
so part of: sequence
location: 489633..491882
location: region:489633-491882:1
so has part: feature:489633-491882:1:exon
subclass of: SO_0000010

position:489633:1
position: 489633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491882:1
position: 491882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489633-491882:1:exon

VCA1004_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ptsP
locus tag: VCA1004_RS02325
EC number: 2.7.3.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000952229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate--protein phosphotransferase
translation: MLIQLREIVEQVSKADDLRQALDILVKDTCQAMHTECCTVYLANNEKSRLELMATQGLKFSGQTIHIPFTEGLVGLVRRSAEPLNLAHAQNHPNFKYFPELGENIYQSFLGTPIIHRRQVLGVLVIQQRSPRSFSEIEESFLVTLAAQLAVILANAKAQGQWQLNKSRVHSYKGIAASSGIAIGKIWWDDTHPDLSKISPASCLDINKEQEWLALAIENAIADFRRMRKRFDNELNKDTLAIFELFIHLLHDPMLRADLNKKIADGDRADWALRQVVELYSERFAKMSDAYLRERANDIRELGQRLLYFLHNSEARDPLIKEPMILVVRELTASILAAIPKDKLLAVISMEGAANSHAAILSRALDIPAIMGVQVKPELISGKLGIVDGYSGDIFVEPAYQLLNEYRSLATEEEELSELVAQELAQPAATKDGQRVELMLNAGLSADTNIAVNQGVDGVGLYRTEISFLLQNRFPSEEEQTQQYKTILTTYPNKRVVMRTLDIGGDKALPYFPIEEDNPFLGWRGIRFTLDHPDIFLIQLRAMLKASSGLNNLNIMLPMVSGCQEIDQSLTLIEQAYKEVTTLDPNICRPQVGIMLEVPSMLYLLPLIADKVDFVSVGTNDLTQYLLAVDRNNARVSDVYEYVHPSVVRALKHIHDMCQQHQLPVCICGELAGDPIGALLLIGMGYRSLSMNTSNVARIKYILRKSQSEELQALLHQAMQQAYGTDIYNLVFQYLEEKGLAGFIRAGKS
SIO_010081: VCA1004_RS02325
subclass of: SO_0000673
so part of: VCA1004_RS02325
location: 489633..491882
location: region:489633-491882:1
so has part: feature:489633-491882:1:exon

WP_086982237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489633-491882:1:exon

VCA1004_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: lgt
locus tag: VCA1004_RS02330
so part of: sequence
location: 492030..492884
location: region:492030-492884:1
so has part: feature:492030-492884:1:exon
subclass of: SO_0000010

position:492030:1
position: 492030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492884:1
position: 492884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492030-492884:1:exon

VCA1004_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: lgt
locus tag: VCA1004_RS02330
EC number: 2.5.1.145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005301219.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO process: GO:0009249 - protein lipoylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolipoprotein diacylglyceryl transferase
translation: MSQGFLVFPQIDPIIFSIGPIGVRWYGLMYLLGFAFAMYVANKRADKPGSGWTREQVSDLLFAGFLGVVLGGRIGYVLFYGFDYWMADPLYIFKVWTGGMSFHGGLLGVITAMWWYARKHHRTFFSIADFIAPLVPFGLGAGRIGNFINGELWGRVTEVPWAMIFPTGGPYPRHPSQLYEFLLEGVVLFLILHWFIRKPRPAGAVSGLFLIGYGVFRFCVEFVREPDAQLGLFDNFISMGQILSTPMIIIGALIMIWSYKTQKPTIDSSRQESERKPSKAVKGK
SIO_010081: VCA1004_RS02330
subclass of: SO_0000673
so part of: VCA1004_RS02330
location: 492030..492884
location: region:492030-492884:1
so has part: feature:492030-492884:1:exon

WP_086982238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492030-492884:1:exon

VCA1004_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02335
so part of: sequence
location: 492888..493739
location: region:492888-493739:1
so has part: feature:492888-493739:1:exon
subclass of: SO_0000010

position:492888:1
position: 492888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493739:1
position: 493739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492888-493739:1:exon

VCA1004_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02335
EC number: 2.1.1.45
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006075639.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thymidylate synthase
translation: MKQYLELCQRIINEGQWVENERTGKRCLTIINADLTYDVGHNQFPLVTTRKSFWKAAVAELLGYIRGYDNAEDFRKLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRQWAKPDGGHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQRSCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKIVNGHIYEDQLAPMRDIQLKREPFAAAKFHINPKIKTLEDLETWVTLDDFEVTDYQCHEPIKYPFSV
SIO_010081: VCA1004_RS02335
subclass of: SO_0000673
so part of: VCA1004_RS02335
location: 492888..493739
location: region:492888-493739:1
so has part: feature:492888-493739:1:exon

WP_086982239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492888-493739:1:exon

VCA1004_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: nhaR
locus tag: VCA1004_RS02340
so part of: sequence
location: 493848..494747
location: region:493848-494747:1
so has part: feature:493848-494747:1:exon
subclass of: SO_0000010

position:493848:1
position: 493848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494747:1
position: 494747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493848-494747:1:exon

VCA1004_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: nhaR
locus tag: VCA1004_RS02340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017629799.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional activator NhaR
translation: MSHLNYNHLYYFWMVCKQGSVARAAEALFLTPQTVTGQIKAFEDRMNGKLMKRSGRSVEPTELGQLVFKYADKMFGLSYEMLDIVNYSQQANVLFDVGVADALSKRLVSKILLNTVPDDNSIHLRCFESTHELLLEQLSQHKLDMILSDCPVDSSQSPGLFSKKLGECKMSFYSSQAIVDGDFPAILNQRKLLIPGRRTSMGRNVMHWFERLGITPNILGEFDDSALMKAFARYHTEAIFLAPNLYAAEVDDEFPLHLIAEVDDLKEEYYVIFAERMIQHPSVKNVCDADFSELFKVTL
SIO_010081: VCA1004_RS02340
subclass of: SO_0000673
so part of: VCA1004_RS02340
location: 493848..494747
location: region:493848-494747:1
so has part: feature:493848-494747:1:exon

WP_086982240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493848-494747:1:exon

VCA1004_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02345
so part of: sequence
location: 494779..495075
location: region:494779-495075:1
so has part: feature:494779-495075:1:exon
subclass of: SO_0000010

position:494779:1
position: 494779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495075:1
position: 495075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494779-495075:1:exon

VCA1004_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MDLNKMERNLSQAVVLLKAMANENRLQILCILHEDELSVGELCEKLPLSQSALSQHLAWLRRDGLVSTRKQSQTVYYSLQSDEVKALIEQLHQLYCKK
SIO_010081: VCA1004_RS02345
subclass of: SO_0000673
so part of: VCA1004_RS02345
location: 494779..495075
location: region:494779-495075:1
so has part: feature:494779-495075:1:exon

WP_086982241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494779-495075:1:exon

VCA1004_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rpsT
locus tag: VCA1004_RS02350
so part of: sequence
location: complement(495228..495488)
location: region:495228-495488:-1
so has part: feature:495228-495488:-1:exon
subclass of: SO_0000010

position:495228:-1
position: 495228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495488:-1
position: 495488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495228-495488:-1:exon

VCA1004_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rpsT
locus tag: VCA1004_RS02350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447926.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
translation: MANSKSAKKRAIQAEKRRQHNASRRSMMRTYMKKTIAAIAAGDKEAATAALAEATPLLDRMATKGLIHKNKAARHKSRFTAAIKAL
SIO_010081: VCA1004_RS02350
subclass of: SO_0000673
so part of: VCA1004_RS02350
location: complement(495228..495488)
location: region:495228-495488:-1
so has part: feature:495228-495488:-1:exon

WP_086982242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495228-495488:-1:exon

VCA1004_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: murJ
locus tag: VCA1004_RS02355
so part of: sequence
location: 495782..497338
location: region:495782-497338:1
so has part: feature:495782-497338:1:exon
subclass of: SO_0000010

position:495782:1
position: 495782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497338:1
position: 497338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495782-497338:1:exon

VCA1004_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: murJ
locus tag: VCA1004_RS02355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012549386.1
GO process: GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein biosynthesis integral membrane protein MurJ
translation: MSRKLLRSGLIVSSMTFVSRVLGLVRDVVVANLMGAGAAADVFFFANRIPNFLRRLFAEGAFSQAFVPVLTEYHASGDMDKTRQLIAKASGTLGVLVTLVTLFGVLGSGIVTAIFGAGWFMDWLNGGPDAHKFLLASFLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNIMMIVAALYISPNMEQPEVGLAIGVFLGGLVQFLFQIPFLLKQGMIVRPQWGWNDPGVKRIRTLMIPALFGVSVSQINLLFDSAVASFLATGSISYLYYSDRLLEFPLGLFGIAIATVILPALSRNHVDAESHGFAKTMDWGVRMVLLLGVPAMCGLIILAKPMLMVLFMRGEFSPADVQNASLSLWAYATGLLNFMLIKVLAPGYYSRQDTKTPVRYGIIAMLTNIVFNAIFAYFFGYVGLALATSLSALVNMTLLYRGLHIANVYRLSKETIGFAIKVALAGAVMVAAIEWQMADFDVWLSWSTAYRAMWLVGLIGLGALVYVVSALILGVRTRHLKAD
SIO_010081: VCA1004_RS02355
subclass of: SO_0000673
so part of: VCA1004_RS02355
location: 495782..497338
location: region:495782-497338:1
so has part: feature:495782-497338:1:exon

WP_086982244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495782-497338:1:exon

VCA1004_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ribF
locus tag: VCA1004_RS02360
so part of: sequence
location: 497441..498424
location: region:497441-498424:1
so has part: feature:497441-498424:1:exon
subclass of: SO_0000010

position:497441:1
position: 497441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498424:1
position: 498424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497441-498424:1:exon

VCA1004_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ribF
locus tag: VCA1004_RS02360
EC number: 2.7.1.26
EC number: 2.7.7.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004744853.1
GO function: GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional riboflavin kinase/FAD synthetase
translation: MELIRGIHNIKPHHKGCVLSIGNFDGVHLGHQQVLTQLCEQADRLGLPAVVMTFEPQPMEFFAKQAAPARLTRLRDKFVQLEKCQIDRLLCVNFNQEFASQSPADFIYELLVRRLGVKFLVVGDDFCFGKDRKGNFSDLQRAAQEHDFQVVSTQSFCMPARVTQQDATPIRVSSTAIRQALASDDLASATTMLGRDYSINGRVSHGRKLGRTIGFPTANIPLKRNVSPVSGVYAVKVKGADEQKMVGGVANIGNRPTVNGIRQQLEVHLFDFKQNLYGKQLEVVLLHKIRDEQKFDSFELLKQQIELDAQVARVWLLEHNMFSEALA
SIO_010081: VCA1004_RS02360
subclass of: SO_0000673
so part of: VCA1004_RS02360
location: 497441..498424
location: region:497441-498424:1
so has part: feature:497441-498424:1:exon

WP_086982245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497441-498424:1:exon

VCA1004_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ileS
locus tag: VCA1004_RS02365
so part of: sequence
location: 498485..501343
location: region:498485-501343:1
so has part: feature:498485-501343:1:exon
subclass of: SO_0000010

position:498485:1
position: 498485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501343:1
position: 501343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498485-501343:1:exon

VCA1004_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ileS
locus tag: VCA1004_RS02365
EC number: 6.1.1.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012842132.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoleucine--tRNA ligase
translation: MTDYKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYSAIRAAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIELMVEKKKGKPGQKISAAEFREECRKYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFDTEANIIRALGKIADQGHLLKGFKPVHWCTDCGSALAEAEVEYKDKVSPSIDVRFKAADEAAVVAKFDCKDGHQGEGDVSIVIWTTTPWTLPANRAVCLRDDLEYVLIQVEAHGEHKAERIIVASELAKSVLDRAGIEHFHNLGFTTGKELELSRFNHPFYEFDVPAILGDHVTTDSGTGVVHTAPGHGQEDFVVGKQYGLEVANPVGSNGVYLPDTELFAGQHVFKANDSVLEVLKEKGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALSEIKNVQWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETAELHPNTPELIEKVAKLVEQKGIQAWWDVEIADLMGEADAANYEKVLDTLDVWFDSGATHFAVVDSREEFNGNSADLYLEGSDQHRGWFQSSLITSVAIKDKAPYKQVLTHGFVVDGNGRKMSKSIGNVVAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTARFFLANLNGFNPATDMVAPEDMVALDRWAVARAQAAQTEIVKAYEEYNTHGVTQRLMQFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALYYIVEALVRWMAPIMSFTADEIWNEMPAKLPNGEARDKFVFTGEWFDGLFGLAEGEELNNTFWTQIQTVRASVNKLLEAARNDKTIGGSLQAEVTLFAEEALAATINKLEDELRFVLLTSKAQVKPLSEKTDSAKETEVEGLFVEVAASEAEKCDRCWHHVADVGTIAGHETICGRCVSNVDGDGEVRQFA
SIO_010081: VCA1004_RS02365
subclass of: SO_0000673
so part of: VCA1004_RS02365
location: 498485..501343
location: region:498485-501343:1
so has part: feature:498485-501343:1:exon

WP_086982246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498485-501343:1:exon

VCA1004_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: lspA
locus tag: VCA1004_RS02370
so part of: sequence
location: 501346..501861
location: region:501346-501861:1
so has part: feature:501346-501861:1:exon
subclass of: SO_0000010

position:501346:1
position: 501346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501861:1
position: 501861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501346-501861:1:exon

VCA1004_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: lspA
locus tag: VCA1004_RS02370
EC number: 3.4.23.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005385948.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MSLLNMSGLKQTGLRWLWLAVVVFCFDIGIKLVVMNNMGYGWTNRIEVLPFFNLLYVHNLGAAFSFLSDQEGWQRWFFSGIAFVVTGVLMLWMRKLPATERWNNIAYSLVIGGALGNVFDRLVHGFVVDYLDFFWGNYHWPAFNLADSAICIGAVMIVIDGFRSKKEQAER
SIO_010081: VCA1004_RS02370
subclass of: SO_0000673
so part of: VCA1004_RS02370
location: 501346..501861
location: region:501346-501861:1
so has part: feature:501346-501861:1:exon

WP_086982247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501346-501861:1:exon

VCA1004_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fkpB
locus tag: VCA1004_RS02375
so part of: sequence
location: 502051..502479
location: region:502051-502479:1
so has part: feature:502051-502479:1:exon
subclass of: SO_0000010

position:502051:1
position: 502051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502479:1
position: 502479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502051-502479:1:exon

VCA1004_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fkpB
locus tag: VCA1004_RS02375
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001068086.1
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FKBP-type peptidyl-prolyl cis-trans isomerase
translation: MSVITASSTVTLHFTIKLKDGSVADSTHNMGKPAKFSMGDGSLSPNFEQCLIGLQTGDSKAIELDAEDAFGMANPDFIQYMDKTRFSGQDLEVGTIMAFSGPDGSEIPGIISEVNGESVKVDFNHPLAGQAVIFDVEILNVD
SIO_010081: VCA1004_RS02375
subclass of: SO_0000673
so part of: VCA1004_RS02375
location: 502051..502479
location: region:502051-502479:1
so has part: feature:502051-502479:1:exon

WP_086982248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502051-502479:1:exon

VCA1004_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
alternative label: lytB
gene: ispH
locus tag: VCA1004_RS02380
gene synonym: lytB
so part of: sequence
location: 502553..503509
location: region:502553-503509:1
so has part: feature:502553-503509:1:exon
subclass of: SO_0000010

position:502553:1
position: 502553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503509:1
position: 503509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502553-503509:1:exon

VCA1004_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
alternative label: lytB
gene: ispH
locus tag: VCA1004_RS02380
gene synonym: lytB
EC number: 1.17.7.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020335931.1
GO function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
translation: MTQNMKILLANPRGFCAGVDRAISIVERALEMYQPPIYVRHEVVHNRFVVEGLKQRGAVFVEELSEVPDDNIVIFSAHGVSQAVRQEAKERQLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTMGQYTSDTGGMYLVERPEDVAKLVVKDPTHLHYVSQTTLSVDETSDVIDELRRVFPKIQGPRKDDICYATQNRQDAVRILAGSVDVMVVVGSKNSSNSTRLKELSEKLGTPGYLTDCSEDINPAWFDGKTKVGVTAGASAPEELVNQIIERIKELGGRDVEEVLGREENMFFEVPKELQIKNVE
SIO_010081: VCA1004_RS02380
subclass of: SO_0000673
so part of: VCA1004_RS02380
location: 502553..503509
location: region:502553-503509:1
so has part: feature:502553-503509:1:exon

WP_164520813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502553-503509:1:exon

VCA1004_RS15270
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS15270
so part of: sequence
location: 504226..504543
location: region:504226-504543:1
so has part: feature:504226-504543:1:exon
subclass of: SO_0000010

position:504226:1
position: 504226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504543:1
position: 504543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504226-504543:1:exon

VCA1004_RS15270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS15270
inference: COORDINATES: protein motif:HMM:NF025027.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4145 domain-containing protein
translation: MQKLCIQLGEKGENINADIKSLVGKGLNPLVQKSLDALRITGNNAVHPGEINLSEEPERVLKLFELINFIADKMITEPKEIESFYGTLPSGSLEAVEKRDKFASK
SIO_010081: VCA1004_RS15270
subclass of: SO_0000673
so part of: VCA1004_RS15270
location: 504226..504543
location: region:504226-504543:1
so has part: feature:504226-504543:1:exon

WP_232012633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504226-504543:1:exon

VCA1004_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02390
so part of: sequence
location: 504623..505447
location: region:504623-505447:1
so has part: feature:504623-505447:1:exon
subclass of: SO_0000010

position:504623:1
position: 504623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505447:1
position: 505447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504623-505447:1:exon

VCA1004_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017049049.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4393 domain-containing protein
translation: MSNESSNESNIEGTINAVTGLAKAIPVYEDALQPAAKEIGKALCTVAKTVNVALAPVSSLVWGYDKIKDFVDTKVSEKLSSVKDEDIVSPPPNVAGPALESLKYTGSIEELKELYANLIASSMDKNTTHKAHPSFVEIIKQLSPDEAKLLVYFTSSGSAPIIDIKNNRKDKSGGRYEYRYFTNIGEKLNVENLGLNSSYWSNLIRLGLVDIPDNFQLIEEGIYDEIISHMTVKSIVSHINKQEGRVAEIKKTAVLVTDLGRQFIDVCVVDHRTQ
SIO_010081: VCA1004_RS02390
subclass of: SO_0000673
so part of: VCA1004_RS02390
location: 504623..505447
location: region:504623-505447:1
so has part: feature:504623-505447:1:exon

WP_086982249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504623-505447:1:exon

VCA1004_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02395
so part of: sequence
location: complement(505892..507382)
location: region:505892-507382:-1
so has part: feature:505892-507382:-1:exon
subclass of: SO_0000010

position:505892:-1
position: 505892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507382:-1
position: 507382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505892-507382:-1:exon

VCA1004_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017053664.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon starvation protein A
translation: MMMFLFCVAALIVGYFIYGAFIEKVFGVKENRTTPAYSKQDGVDYVPMSNKKVYLVQLLNIAGVGPIFGPIMGALYGPAAMLWIVLGCIFAGAVHDYFSGMLSIRNGGASVPSITGRYLGKGAKHFMNVFAIVLLLLVGVVFVSAPAGMITNLVNEQTSMTVSMGTMVAIIFGYYILATIVPIDKIIGRFYPLFGFLLIFMSVGLISAIFFSSEHTILAGYHFSDMFTNMNPHDLPLWPALFITIACGAISGFHATQSPLMARCLENEKNGRFVFFGAMIGEGIIALIWCAIALSFFGSMDALGEAIKQGGPGNVVYSSSFGLLGVFGGVIAFLGVVILPITSGDTAFRSSRLILAEYFNMEQKTLKSRLFMALPLFVLGGILTQVDFGIIWRYFGFANQMTAVMMLWTASAYLLRFNKLHWITTIPAMFMTTVCITFILNSSTLGFGLPMQLSTIIGVIAMLIITAYVIKISKGKGDPEFDHAEEDKLNAKPETV
SIO_010081: VCA1004_RS02395
subclass of: SO_0000673
so part of: VCA1004_RS02395
location: complement(505892..507382)
location: region:505892-507382:-1
so has part: feature:505892-507382:-1:exon

WP_086982250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505892-507382:-1:exon

VCA1004_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02400
so part of: sequence
location: 507642..508022
location: region:507642-508022:1
so has part: feature:507642-508022:1:exon
subclass of: SO_0000010

position:507642:1
position: 507642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508022:1
position: 508022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507642-508022:1:exon

VCA1004_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023730.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2799 domain-containing protein
translation: MYMKKIQPSSWLTKSLLAATLVLLAACANTAEDYAKAGDWQAVGYSDGVRGKPHRTAGDFKDFNNVNIDDYAQGYMKGVDEYCNPNHAYQIGLTGSYYEGVCEGTPNAQKFRMEWQRGWNDSQLNK
SIO_010081: VCA1004_RS02400
subclass of: SO_0000673
so part of: VCA1004_RS02400
location: 507642..508022
location: region:507642-508022:1
so has part: feature:507642-508022:1:exon

WP_086982251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507642-508022:1:exon

VCA1004_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02405
so part of: sequence
location: 508073..509860
location: region:508073-509860:1
so has part: feature:508073-509860:1:exon
subclass of: SO_0000010

position:508073:1
position: 508073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509860:1
position: 509860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508073-509860:1:exon

VCA1004_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023729.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:proton antiporter
translation: MLQNIDVGLMLAAVGLVGLACQWLAWRMKLPAILFLLIAGFIIGPITHIFQPNEMFGDLLFPLISLAVGVILFEGSLTLNFKEIREVNRTVINIVTIGALVTWALTSVFTHYLLDFSWPLALLFGSLTVVTGPTVVVPLLRTVRPKAKLANILRWEGILIDPIGALFIVMVYEFIVSSSELHSLHVFGLILLIGIVLGALAGMLLAHVLRQRLLPEYLQPFAVLTLVLGVFSISNSLESESGLLAVTVMGMWLANAKGVKIQSILHFKENLTILLISGLFLMLSARMELDDFAALGVAAGVLFVAIQLLSRPIAIFVATIGSSLSFKEKAFIAWVAPRGIVAASISSLFAIKLVDAGVEGASLLVPLTFMVIVGTVVLQSITARPLANLLNVSEPSPRGYLIVGANDVGRTIAMALQKYGYRIVITDSNWEYIRKARMQGLETYYGNPISSHAEEYLDLIGIGNLISVTPDKHFNIVVARYFMNEFSERRVFFLNGRNKENEHEKHRVVEEKHGRVFLGDDVGYKKLASLINQGAEIKHTRLTNEFKWQDYVMKYVDGHRIPLFTVDPKGNIHILSNDSTHTTEAGWTVVSLIKE
SIO_010081: VCA1004_RS02405
subclass of: SO_0000673
so part of: VCA1004_RS02405
location: 508073..509860
location: region:508073-509860:1
so has part: feature:508073-509860:1:exon

WP_086982252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508073-509860:1:exon

VCA1004_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02410
so part of: sequence
location: complement(510093..511178)
location: region:510093-511178:-1
so has part: feature:510093-511178:-1:exon
subclass of: SO_0000010

position:510093:-1
position: 510093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511178:-1
position: 511178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510093-511178:-1:exon

VCA1004_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013856145.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase/peptidase C39 family protein
translation: MEFRRATQQDLPALVELESQVFSSDVIAPRQMKRFLQSQHSLVFVAQDKQQIAGYALLLFHQGTQLSRLYSIAVNPDFRGQQIAQQLVEMCERSALEQGSTTLRLEVRNDNIAAKNLYQKLGYKPLKVLIHYYDDLADGIRMQKRLTASQPKTLLPMPLYIQTTPFTCGAACLLMAFSMLDKAFEPNRKEELQLWREATTIFMAAGHGGCSGHGLALAAKKRGFDVELWIHSQSTPFVDSVRDPNKKEVIEIVHQDFCQQAESLGIHHIMSPPNNQQIETWITEGKAVLLLISTYRFNGYKEPHWIILSGMNEQFFFIHDPHSDRENDVASSASIPVSKASLAQIIGFGKQKHTACVVVSS
SIO_010081: VCA1004_RS02410
subclass of: SO_0000673
so part of: VCA1004_RS02410
location: complement(510093..511178)
location: region:510093-511178:-1
so has part: feature:510093-511178:-1:exon

WP_086982253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510093-511178:-1:exon

VCA1004_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02415
so part of: sequence
location: 511281..512747
location: region:511281-512747:1
so has part: feature:511281-512747:1:exon
subclass of: SO_0000010

position:511281:1
position: 511281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512747:1
position: 512747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511281-512747:1:exon

VCA1004_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001285016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RimK family protein
translation: MANFVIVTDKDSDWRQYFPSDQVVTVDTYLQPSFLSEKSDKHKSVQVLNLCRDYGYMSNGYYCSLLAEARGHRVIPRVMAINDVNQPFVISLPEQDLNKYFADAEQVSSKIYFGRSNVKGLEKVARRLFEHFMIPVLDIELKKHGKHWQLVKVTPFPFQDLNNEEQDVFAQSLEQFSNKVWRSSPKPSKQYRYDIAMLVDPEEKMPPSDSVALNRFKKAANRLGMSLQTITAEDFSRLSEFDGLFIRATTNISNFTYRFAKRAEKLGLVVMDDPESIMKCTNKVFLTELLDRHNVPAPKSMILRSFDPDWKKNLLEYMELPLVLKIPDGAFSVGVVKVTDQSTLEAKAAELFDKSALILAQAFMPTDFDWRIGVMNRQAIYACRYHMSRGHWQIYQHHNSGRTTSGGFDTLDLKQVPKNVVDTAVKAANLIGSGLYGVDLKEIDGQVYVIEVNDNPSIDNKVEDLWLGDLLYDRIMTEFLRRIQLRGF
SIO_010081: VCA1004_RS02415
subclass of: SO_0000673
so part of: VCA1004_RS02415
location: 511281..512747
location: region:511281-512747:1
so has part: feature:511281-512747:1:exon

WP_086982254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511281-512747:1:exon

VCA1004_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
alternative label: yehT
gene: btsR
locus tag: VCA1004_RS02420
gene synonym: yehT
so part of: sequence
location: complement(512864..513598)
location: region:512864-513598:-1
so has part: feature:512864-513598:-1:exon
subclass of: SO_0000010

position:512864:-1
position: 512864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513598:-1
position: 513598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512864-513598:-1:exon

VCA1004_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
alternative label: yehT
gene: btsR
locus tag: VCA1004_RS02420
gene synonym: yehT
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023726.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two-component system response regulator BtsR
translation: MLSAIVIDDELFAREELTELLQETDNVDVIAQASNAIEGLKLINTLKPEAVFVDIQMPQISGIELLAMLDPDNMPHVIFVTAFDQYAIQAFEDNAFDYLLKPVDPMRLQKTIQRLLKAKHNQEALHTPAQINAIAPKQLQQVPCLGHNRIMLIPLQEIESAFSDLSGVHIQTAQQTTSSQLTLKTLEEKTALLRCHRQYLINTQKIREIKLLDNGLGEVITRSGQVVPISRRYLKPLKEELGIV
SIO_010081: VCA1004_RS02420
subclass of: SO_0000673
so part of: VCA1004_RS02420
location: complement(512864..513598)
location: region:512864-513598:-1
so has part: feature:512864-513598:-1:exon

WP_086982255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512864-513598:-1:exon

VCA1004_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02425
so part of: sequence
location: complement(513610..515289)
location: region:513610-515289:-1
so has part: feature:513610-515289:-1:exon
subclass of: SO_0000010

position:513610:-1
position: 513610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515289:-1
position: 515289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513610-515289:-1:exon

VCA1004_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004744838.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MDLILSLLQQMCVYLVLAYMLSKTPIFLPLLNISSRLSHKFSCYVLFSLFCIMGTYFGLQIDDAIANTRAIGAVIGGLLGGPIVGFAVGLTGGLHRYSLGGFTDVACAISTTVEGLIGGLLHLYLVRKEKVEQLFNPIIVLAVTLVAEVSQMLIITTVAKPFDQAYALVSDIAAPMIIANCIGAALFVSILQDKKTIYEKYSATFSRRALTIAERSVGIWNTGFNSVNAEKIVRIIYEETNVGAVAITDKEKILAFIGTGDDHHKPNTPISSPCTIQAMQQNRVMYLDGRESPYQCSISNHCSLGSVLVIPLRAGKEVVGTIKLYEPKRKLLSNINRSMGEGIAQLLSSQILYNDFQRQQTLLTQAEIKLLHAQVNPHFLFNALNTISAVIRRDPNKARELIQHLSHFFRSNLKQNIETVTFKEELAHVNAYLTIEKARFTDRLEVDINIDEHLLEKSLPSFTLQPLVENAIKHGISNKIEGGKVRLFSQQNSLGYRIIVEDNAGNFEPPKSDHEGLGMEIVNKRLTHFYGPLAELQTHCHKDHLTRMSFLIPYEKIGK
SIO_010081: VCA1004_RS02425
subclass of: SO_0000673
so part of: VCA1004_RS02425
location: complement(513610..515289)
location: region:513610-515289:-1
so has part: feature:513610-515289:-1:exon

WP_086982256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513610-515289:-1:exon

VCA1004_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02430
so part of: sequence
location: 515489..516562
location: region:515489-516562:1
so has part: feature:515489-516562:1:exon
subclass of: SO_0000010

position:515489:1
position: 515489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516562:1
position: 516562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515489-516562:1:exon

VCA1004_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02430
EC number: 2.5.1.54
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008077190.1
GO function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-7-phosphoheptulonate synthase
translation: MYKSELSNINISDEQLIITPNALKKKIPLSEKARKCIQSSRQTIADIIHKKDHRLLVVCGPCSIHDIDAAKEYAKRLKALSSQLDDQIYLVMRVYFEKPRTTVGWKGLINDPHLDNSFDIEHGLHLARQLLVDLAEMEIPLATEALDPISPQYLGDTFSWAAIGARTTESQTHREMASGLSVPVGFKNGTDGSLATAINAMQAASSSHRFMGIDSDGQVALLTTQGNHNGHVILRGGKQTNYDSVSVNECEQELAKHGLDAALMVDCSHANSRKDYRRQPLVAEDVIHQIREGNRSIIGLMIESHINEGNQASDIPLSEMQYGVSITDACINWDTTESLLRHAHKELVPFLQDRLKG
SIO_010081: VCA1004_RS02430
subclass of: SO_0000673
so part of: VCA1004_RS02430
location: 515489..516562
location: region:515489-516562:1
so has part: feature:515489-516562:1:exon

WP_086982257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515489-516562:1:exon

VCA1004_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tyrA
locus tag: VCA1004_RS02435
so part of: sequence
location: 516607..517737
location: region:516607-517737:1
so has part: feature:516607-517737:1:exon
subclass of: SO_0000010

position:516607:1
position: 516607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517737:1
position: 517737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516607-517737:1:exon

VCA1004_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tyrA
locus tag: VCA1004_RS02435
EC number: 1.3.1.12
EC number: 5.4.99.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023723.1
GO function: GO:0004106 - chorismate mutase activity [Evidence IEA]; GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO process: GO:0046417 - chorismate metabolic process [Evidence IEA]; GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional chorismate mutase/prephenate dehydrogenase
translation: MAIELNELRDQIDAVDKQMLELLAQRLALVEKVGEVKSKYGLPIYAPDREASMLASRRAEAEKRGVPAQLIEDILRRTMRESYASEKDSGFKCLNPELRSIVIVGGHGQLGGLFKRMFELSGYQVKVLGSQDWDNAEQLVQDAGMVVVSVPIHLTDTVIKKLPKLPDDCILCDLTSIKAEPLAAMLEAHCGPVVGLHPMFGPDIPSMAKQVIICSDGRMPETYQWLLKQFEIWGASICAIDAEEHDNGMTLIQALRHFTSFAYGSHLSQENPNLDTLVQLSSPIYRLELAMVGRLFAQDPDLYGDIIMSSQRNIDMIKRFHQRFGEAIKILDNQDKQAFIEQFNAVSTWYGDYSQQFMRESQNLLKQANDSIHRGK
SIO_010081: VCA1004_RS02435
subclass of: SO_0000673
so part of: VCA1004_RS02435
location: 516607..517737
location: region:516607-517737:1
so has part: feature:516607-517737:1:exon

WP_086982258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516607-517737:1:exon

VCA1004_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02440
so part of: sequence
location: complement(517872..518357)
location: region:517872-518357:-1
so has part: feature:517872-518357:-1:exon
subclass of: SO_0000010

position:517872:-1
position: 517872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518357:-1
position: 518357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517872-518357:-1:exon

VCA1004_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017022609.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MKMNHVGIMVGDMDKAVEFYTKALGLEIVMGNTKVTEERETAIGRMCIAVFGEGFKGFNIAHLLTKDGIGFELFEMKERQQRHEVDFSRIGIFHFCLQTDDFEGVIKRTEELGGKVRMDIMRYHPEDENNTSQMVYLEDPFGNLFELYSHSYQETYAADYE
SIO_010081: VCA1004_RS02440
subclass of: SO_0000673
so part of: VCA1004_RS02440
location: complement(517872..518357)
location: region:517872-518357:-1
so has part: feature:517872-518357:-1:exon

WP_086982259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517872-518357:-1:exon

VCA1004_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02445
so part of: sequence
location: complement(518568..519665)
location: region:518568-519665:-1
so has part: feature:518568-519665:-1:exon
subclass of: SO_0000010

position:518568:-1
position: 518568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519665:-1
position: 519665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518568-519665:-1:exon

VCA1004_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02445
inference: COORDINATES: protein motif:HMM:NF013700.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MSHAAPNLVNSTHFDFTANKGFWPMMIFKLIIGKKLISKIIIIGIILLLSITSISFWFNNDNTQKQQQDLREQLHKYQQLYQQQLAFNKQLVINQQQADFHAKMEADEELVEFPTQLTADSTNLKTPGLLSEKEAIDTAMISDKQRLSLPLSASIETSLFRMIPNDSPVHYQRVSSPFGGRVHPISGKKSHHLGIDLTCPLGTPIYATADGVVETTRPSQQGYGNMIKVRHAFGFMTLYAHLHQFAVSQGQFIEKGDRIGFCGSSGNSTGSHLHYEVRFIGKALNPQDFMQWQPNHIAYLFTQQQQVPWASLMEQLTNTIHLQTFLAINQTNYSSSPSSKIIKQRSQGLDQFGLSEDNWQTVKER
SIO_010081: VCA1004_RS02445
subclass of: SO_0000673
so part of: VCA1004_RS02445
location: complement(518568..519665)
location: region:518568-519665:-1
so has part: feature:518568-519665:-1:exon

WP_086982260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518568-519665:-1:exon

VCA1004_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ettA
locus tag: VCA1004_RS02450
so part of: sequence
location: complement(520009..521676)
location: region:520009-521676:-1
so has part: feature:520009-521676:-1:exon
subclass of: SO_0000010

position:520009:-1
position: 520009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521676:-1
position: 521676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520009-521676:-1:exon

VCA1004_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ettA
locus tag: VCA1004_RS02450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017110510.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0045900 - negative regulation of translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-dependent translational throttle protein EttA
translation: MAEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDTDIDGEARPQPGLNVGYLPQEPVLDESKTVREIVEEAVADVADALKRIDAVYAAYAEPDADFDALAKEQGELEALIQAKDGHNLENALERAADALRLPEWDAKIEHLSGGERRRVAICRLLLEKPDMLLLDEPTNHLDAESVAWLEHFLVDYSGTVVAITHDRYFLDNAAGWILELDRGEGIPWEGNYTSWLEQKDARLAQEASTENARKKTIEKELEWVRQNPKGRQAKSKARMARFEELNKTDHQKRNETNELFIPPGERLGDKVLEVNNLTKSFGDRVLIDNLSFSMPKGAIVGIVGANGAGKSTLFKMLSGSEQPDAGTIELGETVKLASVDQFRDSMNDNNTVFQEISEGADIIKINNFEIPARAYCSRFNFRGVDQQKRIGELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETLRALEEALLEFPGCTMVISHDRWFLDRIATHILDYRDEGQVNFYEGNYTEYSEWLKQTLGAAAAEPHRIKYKRVTK
SIO_010081: VCA1004_RS02450
subclass of: SO_0000673
so part of: VCA1004_RS02450
location: complement(520009..521676)
location: region:520009-521676:-1
so has part: feature:520009-521676:-1:exon

WP_086982261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520009-521676:-1:exon

VCA1004_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02455
so part of: sequence
location: 521883..523874
location: region:521883-523874:1
so has part: feature:521883-523874:1:exon
subclass of: SO_0000010

position:521883:1
position: 521883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523874:1
position: 523874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521883-523874:1:exon

VCA1004_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023719.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase SLT domain-containing protein
translation: MLNFKKTLIFCAVSTSAILSLPAVNAQAISSTQVNTSDSDSSDKPRSPLEIQRQVYEKGQDLLDAGDVAGYQVIRPQIASYPLTPYIDYRVYLTDIENRQPQEVNAFTEKYQTFPFSSRVRANYLDALAKNKQWKTLLEYQQEEPRDQRYRCYYYYAKWTQGQKDAAYQGAKDLWLTGSSVSSACDDLFDQWTQAGLRTETLILERMLLSFKSGHSGMFRYLDGLLTSDNAKASSKDLQALYRDPSKVGEFSKKAKVTPFNQQLTEYAFRQLIRKNTQQAVELYEQVVQAQKLPLTAQVDLSNYASAWLMNTDSSSLAQWRDSMLNKQGLPSRVERRARIAIQNADWKDLAHWISKLPAEDQQSLRWQYWSARVEMAQGKTKQAKQRLQPLLGQRNFYSAAAAELLGEPIRYQSKMLNEKLPDIKAKQAALDRIQEMINVDKISAAKSEWRWLLWHSTQSEKKALVQYAAEKHWHHFTVVATIEAKMWDYTSLRFPIAHRWWFDFYSKKNDVPLITLMSLARQESALDVEARSPVGARGIMQIMPTTAKHTADVYDLKYQHADELYNVQKNIEIGSSYLGGLLDDFNHNRIFAFAAYNAGPHRVKVWRARSNQKIDAYSFIEAIPFDETRGYVQNILMFETYYRNLLGQEGAFLTPQEVKEKY
SIO_010081: VCA1004_RS02455
subclass of: SO_0000673
so part of: VCA1004_RS02455
location: 521883..523874
location: region:521883-523874:1
so has part: feature:521883-523874:1:exon

WP_086982262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521883-523874:1:exon

VCA1004_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: trpR
locus tag: VCA1004_RS02460
so part of: sequence
location: 523879..524226
location: region:523879-524226:1
so has part: feature:523879-524226:1:exon
subclass of: SO_0000010

position:523879:1
position: 523879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524226:1
position: 524226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523879-524226:1:exon

VCA1004_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: trpR
locus tag: VCA1004_RS02460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004410295.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trp operon repressor
translation: MANSKEQIEKEVISPEFTDWQDVLALLSHSDQQQQLDFLLSMLLTYDEREALLARMNILHELIKGDYSQRQISQMLGVGVATITRGSSELKKLQPAQKQQLQAMLQVAAEKSEEH
SIO_010081: VCA1004_RS02460
subclass of: SO_0000673
so part of: VCA1004_RS02460
location: 523879..524226
location: region:523879-524226:1
so has part: feature:523879-524226:1:exon

WP_086982263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523879-524226:1:exon

VCA1004_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: yjjX
locus tag: VCA1004_RS02465
so part of: sequence
location: complement(524223..524756)
location: region:524223-524756:-1
so has part: feature:524223-524756:-1:exon
subclass of: SO_0000010

position:524223:-1
position: 524223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524756:-1
position: 524756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524223-524756:-1:exon

VCA1004_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: yjjX
locus tag: VCA1004_RS02465
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001883845.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inosine/xanthosine triphosphatase
translation: MHKKVIVASLNPAKINAVKSAFSASFPDEQFVFEGVSVASGVPDQPMFDQETKQGALNRVHHAQRTISDADFYVGLEAGIEANFTYAWMIIESNPASGEVIRGESRSACLMLPPQVLEKVRQGKELGHVMDEVFATENIKQKGGAIGLLTHHQLTRSSVYHQALILALIPFLNPQHF
SIO_010081: VCA1004_RS02465
subclass of: SO_0000673
so part of: VCA1004_RS02465
location: complement(524223..524756)
location: region:524223-524756:-1
so has part: feature:524223-524756:-1:exon

WP_086982264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524223-524756:-1:exon

VCA1004_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pheA
locus tag: VCA1004_RS02470
so part of: sequence
location: complement(524759..525940)
location: region:524759-525940:-1
so has part: feature:524759-525940:-1:exon
subclass of: SO_0000010

position:524759:-1
position: 524759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525940:-1
position: 525940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524759-525940:-1:exon

VCA1004_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pheA
locus tag: VCA1004_RS02470
EC number: 4.2.1.51
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005475850.1
GO function: GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO process: GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prephenate dehydratase
translation: MTQLQYSLEEIRLRLNELDDHLLSILSERRALSLEVAKSKVQTAKPVRDAQREQQLLVKLINNGKEKYQLDAPYITKVFHTIIEDSVLLQQAYLQNLANPEESRKPLARVAFLGAKGSYSHLASLEYFSRKNTELIELNCQHFKEVTSTVESGHADFGVLPIENTSSGSINEVYDLLQHTTLYIVGEMTLPIEHCLLAPHDMRLEEIKTLYSHPQPHQQCSEFLSHLKDVTLKSCVSTADAMQKVVELNRPDVAAIGNATSGKLYGLQTIQENIANQTENHTRFIIVARKPVEVSTQIPAKTTVIMSTSQEAGSLVQTLLVLQRYGINMTKLESRPIMGNPWEEMFYVDLEAHLGSVEMQQAIVELTKITRHLKVLGCYPSENIKPTQVKLEG
SIO_010081: VCA1004_RS02470
subclass of: SO_0000673
so part of: VCA1004_RS02470
location: complement(524759..525940)
location: region:524759-525940:-1
so has part: feature:524759-525940:-1:exon

WP_086982265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524759-525940:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 1891186
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01859
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Phe leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(525951..526073)
location: region:525951-526073:-1
so has part: feature:525951-526073:-1:region

position:525951:-1
position: 525951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526073:-1
position: 526073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525951-526073:-1:region

VCA1004_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: raiA
locus tag: VCA1004_RS02475
so part of: sequence
location: complement(526184..526519)
location: region:526184-526519:-1
so has part: feature:526184-526519:-1:exon
subclass of: SO_0000010

position:526184:-1
position: 526184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526519:-1
position: 526519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526184-526519:-1:exon

VCA1004_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: raiA
locus tag: VCA1004_RS02475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017053098.1
GO component: GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0045182 - translation regulator activity [Evidence IEA]
GO process: GO:0009386 - translational attenuation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-associated translation inhibitor RaiA
translation: MKINITGKNIEVTSSIRDYIEAKFKKLEKWQIELISCQATICTEPGKQQKIEATITVPKGQLVASASHEDLYKAINEVEQKLERQLNKLSHKPEAKRSLAEKPELEELEEL
SIO_010081: VCA1004_RS02475
subclass of: SO_0000673
so part of: VCA1004_RS02475
location: complement(526184..526519)
location: region:526184-526519:-1
so has part: feature:526184-526519:-1:exon

WP_086982266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526184-526519:-1:exon

VCA1004_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02480
so part of: sequence
location: complement(526940..527665)
location: region:526940-527665:-1
so has part: feature:526940-527665:-1:exon
subclass of: SO_0000010

position:526940:-1
position: 526940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527665:-1
position: 527665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526940-527665:-1:exon

VCA1004_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004728830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamD
translation: MKRQYLLGLISLLFLAGCADKKDAVPDIPPSDLYTQAQQSLQAGSWAESIKKFEALDSRYPFGPYSDQVQLDLIFAYYKNGDYPLALATIERFTRLNPTHERSDWVLYMRGLTHMAQDSNFMHSLFNMDRSDRDPEPVKAAFVDFKRLLERYPNSLYAADAQLRLMSLKNRLAEYDLASADFYLRREAWIAAINRCQEIQKTYPDTIAARDSLKIQLKAYKELGLEDAIKRTEELIELNKK
SIO_010081: VCA1004_RS02480
subclass of: SO_0000673
so part of: VCA1004_RS02480
location: complement(526940..527665)
location: region:526940-527665:-1
so has part: feature:526940-527665:-1:exon

WP_086982267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526940-527665:-1:exon

VCA1004_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rluD
locus tag: VCA1004_RS02485
so part of: sequence
location: 527825..528796
location: region:527825-528796:1
so has part: feature:527825-528796:1:exon
subclass of: SO_0000010

position:527825:1
position: 527825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528796:1
position: 528796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527825-528796:1:exon

VCA1004_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rluD
locus tag: VCA1004_RS02485
EC number: 5.4.99.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023713.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
translation: MAQQIVRTDTVKDSQLGQRLDQAIAELFSEFSRSRLKEWLLEGKVQINGEVVTKPRTRVMGGEEITVQAELEDEERWEAQDIPLNIVYEDDDIIVINKPRDFVVHPGAGTPDGTVLNALLHHYPAIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRKITREYEAIIIGNMTAGGRIEKPIGRHSTKRTLMAVNELGKPAVTHYRVAEHFREHTRIRLRLETGRTHQIRVHMSYIQHPLLGDTAYGGRARIPKGASAELTDMIRNFDRQALHAVMLKFEHPESGEEMKFHAPIPDDMVAMTEALRVDALENHVEE
SIO_010081: VCA1004_RS02485
subclass of: SO_0000673
so part of: VCA1004_RS02485
location: 527825..528796
location: region:527825-528796:1
so has part: feature:527825-528796:1:exon

WP_086982268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527825-528796:1:exon

VCA1004_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pgeF
locus tag: VCA1004_RS02490
so part of: sequence
location: 528803..529540
location: region:528803-529540:1
so has part: feature:528803-529540:1:exon
subclass of: SO_0000010

position:528803:1
position: 528803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529540:1
position: 529540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528803-529540:1:exon

VCA1004_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pgeF
locus tag: VCA1004_RS02490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005447962.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan editing factor PgeF
translation: MDNIVLPNWPAPTNVKAFSSTRFGGVSTGVYQGLNLGMHVGDDRNIVQRNRDLLRQQHLMPTSPVWLNQTHSADVIELSKPTHHVLDADGATTRHNKIVCCVMTADCLPVLLTNTEGSQVAAVHAGWRGLANGILENAVRQFDKSSQVMAWLGPAIGPTAFEVGEDVYQAFVQHDVHAKDAFTPRVKQSGKWLADMSILATQRLNQAGVEQVFVSQRCTYSEDDIFYSYRRDGVTGRQASFIWLE
SIO_010081: VCA1004_RS02490
subclass of: SO_0000673
so part of: VCA1004_RS02490
location: 528803..529540
location: region:528803-529540:1
so has part: feature:528803-529540:1:exon

WP_086982269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528803-529540:1:exon

VCA1004_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: clpB
locus tag: VCA1004_RS02495
so part of: sequence
location: 529680..532253
location: region:529680-532253:1
so has part: feature:529680-532253:1:exon
subclass of: SO_0000010

position:529680:1
position: 529680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532253:1
position: 532253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529680-532253:1:exon

VCA1004_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: clpB
locus tag: VCA1004_RS02495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002043188.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0042026 - protein refolding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent chaperone ClpB
translation: MRFDKFTSKFQLAISDAQSLALGRDHQFIEPVHLMQALLNQDGSTIRPIFTMLGVDATQLRSKVAQELDKLPKVTGIGGDVQASKNLGNLLNVCDKIAQQRNDAYISSELFLLAALEDHGPLGKLFKELGLNKANVTKAIDEIRGGQNVDDPNAEEKRQALEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGQPGVGKTAIVEGLALRIVNNEVPEGLRNRRVLSLDMGALIAGAKYRGEFEERLKAVLNELAQEDGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYVEKDPALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSNRYVSDRQLPDKAIDLIDEAASSIRIQMDSKPESLDRLDRRIIQLKIEQQALLNEDDAASTKRLAILNQELAEKEREYSELEEVWKTEKASLSGTQHIKAELEQARLDMDVARRAGDLQRMSELQYGKIPELEKQLDNASQVENIELTLLKNRVTDAEIAEVLSKQTGIPVSKMLEAEKAKLLSMESVLHERVIGQKEAVDVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYDEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNLGSDRIQENAATSSYEEMKNQVMEIVSQHFRPEFLNRVDESVVFHPLGQEQIKSIASIQLDRLRQRMADKEYELQVGDDVLSLVAEVGFDPVYGARPLKRAIQQMVENPLARSMLASELLPGKVVRLSVEDDHIVAKQ
SIO_010081: VCA1004_RS02495
subclass of: SO_0000673
so part of: VCA1004_RS02495
location: 529680..532253
location: region:529680-532253:1
so has part: feature:529680-532253:1:exon

WP_086982270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529680-532253:1:exon

VCA1004_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02500
so part of: sequence
location: 533026..534568
location: region:533026-534568:1
so has part: feature:533026-534568:1:exon
subclass of: SO_0000573

position:533026:1
position: 533026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534568:1
position: 534568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533026-534568:1:exon

VCA1004_RS02500
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
locus tag: VCA1004_RS02500
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS02500
subclass of: SO_0000673
so part of: VCA1004_RS02500
location: 533026..534568
location: region:533026-534568:1
so has part: feature:533026-534568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533026-534568:1:exon

VCA1004_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02505
so part of: sequence
location: 534661..534736
location: region:534661-534736:1
so has part: feature:534661-534736:1:exon
subclass of: SO_0000663

position:534661:1
position: 534661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534736:1
position: 534736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534661-534736:1:exon

VCA1004_RS02505
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS02505
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:534695..534697,aa:Glu,seq:ttc)
SIO_010081: VCA1004_RS02505
subclass of: SO_0000673
so part of: VCA1004_RS02505
location: 534661..534736
location: region:534661-534736:1
so has part: feature:534661-534736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534661-534736:1:exon

VCA1004_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02510
so part of: sequence
location: 534765..534840
location: region:534765-534840:1
so has part: feature:534765-534840:1:exon
subclass of: SO_0000663

position:534765:1
position: 534765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534840:1
position: 534840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534765-534840:1:exon

VCA1004_RS02510
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS02510
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:534798..534800,aa:Lys,seq:ttt)
SIO_010081: VCA1004_RS02510
subclass of: SO_0000673
so part of: VCA1004_RS02510
location: 534765..534840
location: region:534765-534840:1
so has part: feature:534765-534840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534765-534840:1:exon

VCA1004_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02515
so part of: sequence
location: 534883..534958
location: region:534883-534958:1
so has part: feature:534883-534958:1:exon
subclass of: SO_0000663

position:534883:1
position: 534883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534958:1
position: 534958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534883-534958:1:exon

VCA1004_RS02515
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS02515
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:534916..534918,aa:Ala,seq:tgc)
SIO_010081: VCA1004_RS02515
subclass of: SO_0000673
so part of: VCA1004_RS02515
location: 534883..534958
location: region:534883-534958:1
so has part: feature:534883-534958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534883-534958:1:exon

VCA1004_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02520
so part of: sequence
location: 534999..535074
location: region:534999-535074:1
so has part: feature:534999-535074:1:exon
subclass of: SO_0000663

position:534999:1
position: 534999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535074:1
position: 535074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534999-535074:1:exon

VCA1004_RS02520
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS02520
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:535032..535034,aa:Val,seq:tac)
SIO_010081: VCA1004_RS02520
subclass of: SO_0000673
so part of: VCA1004_RS02520
location: 534999..535074
location: region:534999-535074:1
so has part: feature:534999-535074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534999-535074:1:exon

VCA1004_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02525
so part of: sequence
location: 535461..538348
location: region:535461-538348:1
so has part: feature:535461-538348:1:exon
subclass of: SO_0000573

position:535461:1
position: 535461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538348:1
position: 538348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535461-538348:1:exon

VCA1004_RS02525
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
locus tag: VCA1004_RS02525
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS02525
subclass of: SO_0000673
so part of: VCA1004_RS02525
location: 535461..538348
location: region:535461-538348:1
so has part: feature:535461-538348:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535461-538348:1:exon

VCA1004_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS02530
so part of: sequence
location: 538480..538595
location: region:538480-538595:1
so has part: feature:538480-538595:1:exon
subclass of: SO_0000573

position:538480:1
position: 538480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538595:1
position: 538595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538480-538595:1:exon

VCA1004_RS02530
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1891186
gene: rrf
locus tag: VCA1004_RS02530
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: VCA1004_RS02530
subclass of: SO_0000673
so part of: VCA1004_RS02530
location: 538480..538595
location: region:538480-538595:1
so has part: feature:538480-538595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538480-538595:1:exon

VCA1004_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02535
so part of: sequence
location: 538666..538742
location: region:538666-538742:1
so has part: feature:538666-538742:1:exon
subclass of: SO_0000663

position:538666:1
position: 538666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538742:1
position: 538742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538666-538742:1:exon

VCA1004_RS02535
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS02535
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:538700..538702,aa:Asp,seq:gtc)
SIO_010081: VCA1004_RS02535
subclass of: SO_0000673
so part of: VCA1004_RS02535
location: 538666..538742
location: region:538666-538742:1
so has part: feature:538666-538742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538666-538742:1:exon

VCA1004_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02540
so part of: sequence
location: 538813..538889
location: region:538813-538889:1
so has part: feature:538813-538889:1:exon
subclass of: SO_0000663

position:538813:1
position: 538813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538889:1
position: 538889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538813-538889:1:exon

VCA1004_RS02540
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1891186
locus tag: VCA1004_RS02540
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:538847..538849,aa:Trp,seq:cca)
SIO_010081: VCA1004_RS02540
subclass of: SO_0000673
so part of: VCA1004_RS02540
location: 538813..538889
location: region:538813-538889:1
so has part: feature:538813-538889:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538813-538889:1:exon

VCA1004_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: nfsA
locus tag: VCA1004_RS02545
so part of: sequence
location: 539558..540280
location: region:539558-540280:1
so has part: feature:539558-540280:1:exon
subclass of: SO_0000010

position:539558:1
position: 539558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540280:1
position: 540280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539558-540280:1:exon

VCA1004_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: nfsA
locus tag: VCA1004_RS02545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001070285.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxygen-insensitive NADPH nitroreductase
translation: MNTVIETMLSHRSIRKFTEEKITSEQLETILSAGIAASSSSFLQTTSIIRVTDPNKRKALVEFSGGQGYVETAAEFLVFCIDYQRHFQLSSEVKPEFTELTLIGAVDAGIMAQNTLLAAESLGLGGVFIGGLRNAPKEVDELLGLPKYCAVLFGMCLGHPDQDPQIKPRLPQNVIVHQDSYQSLSSEVIAEYDAQTSHYYQTRGSNQKTGSWSDHIAGRLSKESRPHIRDYLHSKGLATK
SIO_010081: VCA1004_RS02545
subclass of: SO_0000673
so part of: VCA1004_RS02545
location: 539558..540280
location: region:539558-540280:1
so has part: feature:539558-540280:1:exon

WP_086982272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539558-540280:1:exon

VCA1004_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02550
so part of: sequence
location: complement(540379..540633)
location: region:540379-540633:-1
so has part: feature:540379-540633:-1:exon
subclass of: SO_0000010

position:540379:-1
position: 540379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540633:-1
position: 540633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540379-540633:-1:exon

VCA1004_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014205669.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YfhL family 4Fe-4S dicluster ferredoxin
translation: MALLITDKCINCDMCDPECPNGAITMGDSIYEIDHNLCTECKGHYDKPTCQSVCPINNCIITDPEHVETEDELLEKFVVIQGLA
SIO_010081: VCA1004_RS02550
subclass of: SO_0000673
so part of: VCA1004_RS02550
location: complement(540379..540633)
location: region:540379-540633:-1
so has part: feature:540379-540633:-1:exon

WP_086982273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540379-540633:-1:exon

VCA1004_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: yegQ
locus tag: VCA1004_RS02555
so part of: sequence
location: complement(540635..542053)
location: region:540635-542053:-1
so has part: feature:540635-542053:-1:exon
subclass of: SO_0000010

position:540635:-1
position: 540635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542053:-1
position: 542053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540635-542053:-1:exon

VCA1004_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: yegQ
locus tag: VCA1004_RS02555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006074777.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 5-hydroxyuridine modification protein YegQ
translation: MFKPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQIGINEAHALGKKLYVVCNIQPHNSKLKTFIRDLKPVVDMGPDALIMSDPGLIMMVREAFPEMPIHLSVQANAVNWATVKFWASQGVERVILSRELSLEEIEEIREQCPDTELEIFVHGALCMAYSGRCLLSGYMNKRDPNQGTCTNACRWEYKVEKGTENDAGQIVSAETPVEQFDPSQTQAIEVQEQRPDNTLGLGKPTDEVVLLSESHRPEEKMAAFEDEHGTYIMNSKDLRAIQHVERLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAVAGKPFDESLMGTLESLAHRGYTEGFLRRHTHDAYQNYDYGYSVSDSQQFVGEFTGKRRGHLAEVEVKNKFLLGDSLELMTPNGNINFTLEEMENRKSEKVDDAKGNGHFVFIPVPEDLDLSYGLLMRNLSHGQNTRNPVTATAEAK
SIO_010081: VCA1004_RS02555
subclass of: SO_0000673
so part of: VCA1004_RS02555
location: complement(540635..542053)
location: region:540635-542053:-1
so has part: feature:540635-542053:-1:exon

WP_086982274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540635-542053:-1:exon

VCA1004_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rdgC
locus tag: VCA1004_RS02560
so part of: sequence
location: complement(542254..543165)
location: region:542254-543165:-1
so has part: feature:542254-543165:-1:exon
subclass of: SO_0000010

position:542254:-1
position: 542254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543165:-1
position: 543165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542254-543165:-1:exon

VCA1004_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rdgC
locus tag: VCA1004_RS02560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024485.1
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination-associated protein RdgC
translation: MWFKNCLVYRFNREINLDIEKLESQLAEFKFTPCGSQDKQKFGWTSVINKHSDSFTHVAGEHILVKAKKEEKLLPASVIKDSLQDKIDLLEQQEGRPLKKKEKDDLKDEILIDLLPRAFSRHSFTSILLMPRLGLVVVDSSSTKKAEDALALLRKTIGSLPVIPAIPQIAVETSLTEWVKTGDLPQGFQLLDEAELHSLQEEGGIIRCKKQELSAEEIQNHIAADKVVTKLALSWQERIEFVLSADVSIKRLKISDELKDTNQDIPREDHAQRFDADFTLMCGEFDAFLPQLFDALGGFPQKD
SIO_010081: VCA1004_RS02560
subclass of: SO_0000673
so part of: VCA1004_RS02560
location: complement(542254..543165)
location: region:542254-543165:-1
so has part: feature:542254-543165:-1:exon

WP_086982275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542254-543165:-1:exon

VCA1004_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: phoB
locus tag: VCA1004_RS02565
so part of: sequence
location: 543381..544070
location: region:543381-544070:1
so has part: feature:543381-544070:1:exon
subclass of: SO_0000010

position:543381:1
position: 543381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544070:1
position: 544070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543381-544070:1:exon

VCA1004_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: phoB
locus tag: VCA1004_RS02565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000091118.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO process: GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate regulon transcriptional regulator PhoB
translation: MSRRILVVEDEAPIREMLCFVLEQKGYQTVEAEDYDTAIDKLCEPYPDLILLDWMLPGGSGINFIKHMKREELTRNIPVVMLTARGEEEDKVRGLEVGADDYITKPFSPKELVARLKAVIRRVTPTALEDVIDVQGLKLDPVSHRVTANDTPVDMGPTEFKMLHFFMTHQERVYSREQLLNNVWGTNVYVEDRTVDVHIRRLRKALELAGHDKLVQTVRGAGYRFSTRA
SIO_010081: VCA1004_RS02565
subclass of: SO_0000673
so part of: VCA1004_RS02565
location: 543381..544070
location: region:543381-544070:1
so has part: feature:543381-544070:1:exon

WP_086982276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543381-544070:1:exon

VCA1004_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: phoR
locus tag: VCA1004_RS02570
so part of: sequence
location: 544106..545413
location: region:544106-545413:1
so has part: feature:544106-545413:1:exon
subclass of: SO_0000010

position:544106:1
position: 544106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545413:1
position: 545413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544106-545413:1:exon

VCA1004_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: phoR
locus tag: VCA1004_RS02570
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004400019.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate regulon sensor histidine kinase PhoR
translation: MVERLSWKKLAWSLAFFYFPWLIIGWLFGYMGWLLFVATALQLIWHLHNQVRLSEWLLDEKRLSPPSGTGHWEHLFNGIYRIQQKQRRRRKELGNLIRRFRNGAESLPDAVVVFRSEGNIVWCNKLAQSILGFRWPDDSGQPIANLLRTPDFIHYLSKQDFSEPLEMLSPLTPERVLELRIVPYTEGEHLMVVRDVTQVKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPEILAGPMWSKAHGVMTEQLSRMNALVEQLLTLSKIEASPIHELDEIVNIPSMLDILEKEAIALSGEKKHNIIFDIDRQMKVYGDAEQLRSAISNLVYNAVKYTPAGAEVKVRWFHTAQGACLSVKDTGEGIEAQHINRLTERFYRVDKARSRETGGSGLGLAIAKHALGHHESHLEISSEVGKGSCFSFVLPQKLVVDAAD
SIO_010081: VCA1004_RS02570
subclass of: SO_0000673
so part of: VCA1004_RS02570
location: 544106..545413
location: region:544106-545413:1
so has part: feature:544106-545413:1:exon

WP_086982277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544106-545413:1:exon

VCA1004_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02575
so part of: sequence
location: 545512..546474
location: region:545512-546474:1
so has part: feature:545512-546474:1:exon
subclass of: SO_0000010

position:545512:1
position: 545512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546474:1
position: 546474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545512-546474:1:exon

VCA1004_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter substrate-binding protein
translation: MAKTPIPVTSISATPISETQGAEQLPTYQKVSGVSGILTSVGSDTLATLMLLWAQEFQKIYPNINIQIQASGSSTAPTALTEATSQLGPMSRPMKAKEIESFKHQYGYPPVQLRVAIDAIGIFVNKDNPIAGLNFQQLDAIFSSTLKCGAVRPLTQWQDLGVQAEWAKLGFQLFGRNSVSGTYGYFKQHALCNGDFKRAVNEQPGSASVVQSVASSINGIGYSGVGYHVSKARLVPISQDGQEYITPTRDNILNGEYPLARYLYVYINKNPLKPLPKLQAEFLKFIYSKQGQLNVEKDGYMSLSPSLAQSQLQKVGLSLP
SIO_010081: VCA1004_RS02575
subclass of: SO_0000673
so part of: VCA1004_RS02575
location: 545512..546474
location: region:545512-546474:1
so has part: feature:545512-546474:1:exon

WP_086984610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545512-546474:1:exon

VCA1004_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ppx
locus tag: VCA1004_RS02580
so part of: sequence
location: complement(546555..548099)
location: region:546555-548099:-1
so has part: feature:546555-548099:-1:exon
subclass of: SO_0000010

position:546555:-1
position: 546555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548099:-1
position: 548099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546555-548099:-1:exon

VCA1004_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ppx
locus tag: VCA1004_RS02580
EC number: 3.6.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009705556.1
GO function: GO:0004309 - exopolyphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO process: GO:0006798 - polyphosphate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exopolyphosphatase
translation: MTSINEPNTRYIAAIDLGSNSFHMVVAKVTGPGLQIVSRHKQRVRLADGLDSRMNLDNASMQRGLDCLAMFAERLQDFDTNNVRIAATHTLRQANNAHIFLARAKTVLPFPIEVIPGEEEARLIYLGVAHTQPEWEKKFIIDIGGGSTEMIIGEGFEPQLLNSKQLGCVSYTNQFFSNGKLSKKNFSKAILAAQQKLEALCKPYKKLGWDAALGSSGTIKAIKEVLIGMGYDDGLITLDRLQHLVDELCKLDHIEDIKLNGLTDERKPVFAAGVAILLAIVESFSINSLHFSDGALREGLMYEMEERFQRSDIRMRTTENLAFKHQVDLSHAQNVRTQAEQFLSLVSEQVGIATDSELASLLSWSALLHEVGLSIRYKGFHRHSAYILQHTNMPGFNQEQQQVLSALVRFQRKSLKLQDMPELSIYQPEQILPLICILRLAIVVNGQRKDSEDLPKLTLMIEHKTKCCDGKKVNTQHWSLSCRDKNWLQDNKLLDADLQTEQQYWKNAGWKLSF
SIO_010081: VCA1004_RS02580
subclass of: SO_0000673
so part of: VCA1004_RS02580
location: complement(546555..548099)
location: region:546555-548099:-1
so has part: feature:546555-548099:-1:exon

WP_086982278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546555-548099:-1:exon

VCA1004_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ppk1
locus tag: VCA1004_RS02585
so part of: sequence
location: complement(548120..550183)
location: region:548120-550183:-1
so has part: feature:548120-550183:-1:exon
subclass of: SO_0000010

position:548120:-1
position: 548120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550183:-1
position: 550183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548120-550183:-1:exon

VCA1004_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ppk1
locus tag: VCA1004_RS02585
EC number: 2.7.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005445285.1
GO component: GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO function: GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO process: GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyphosphate kinase 1
translation: MSSEKLYIEKELSWLSFNERVLQEAADKTVPLIERVRFLGIFSSNLDEFFKVRFADVKRRILISQESGSSDGPKHLLTKMQSKVLRLNQRFDELYNELILEMARRRIFLVNESQLQEYQQKWIRKYFQREVLPHITPFLMNKDTDVLGFLKDEHSYLTVEIINNDVRNYALIDIPTNHLPRFIMVPEQKGKRRKTIILLDNIIRFCLDDIFKGFFEYDELNSYTMTMTRDAEYDLRHEVEHSLLEQMSEGVNQRLTAMPVRLVYQRDMPEALLKYLCEKLNMTSYDSLIPGGRYHNFKDFTAFPNVGRDYLENKPLPPLKCSDFNGYPNSFEAISAQDILLYYPYHTFDHITELVRQASFDPKVISIKINIYRVAKNSKLMSSLMDAVHNKKKVTVVVELQARFDEEANIEWAKLLTDAGVHVIFGAPGLKIHSKLLLITRREEGEIKRYAHIGTGNFHEKTARIYTDFALLTADPQLTSEVRSVFGYIENPYRPVRFTQLMVSPRNARQQIYKLIDAEIALAKEGKKAGITLKVNNLVDKGLVSKLYGASNAGVKIRMIVRGMCSLVPGIAGVSENISIISIIDRFLEHPRVVVTENDGDPKVYISSADWMTRNLDYRIEVATPIHSPRLKQRIIDILNIHFIDTVKARVIDKEMNNHYVARGNRKKVRSQIAIYDYLKQIEKKTP
SIO_010081: VCA1004_RS02585
subclass of: SO_0000673
so part of: VCA1004_RS02585
location: complement(548120..550183)
location: region:548120-550183:-1
so has part: feature:548120-550183:-1:exon

WP_086982279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548120-550183:-1:exon

VCA1004_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02590
so part of: sequence
location: 550404..552842
location: region:550404-552842:1
so has part: feature:550404-552842:1:exon
subclass of: SO_0000010

position:550404:1
position: 550404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552842:1
position: 552842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550404-552842:1:exon

VCA1004_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020333631.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MTQTDTFFQQRDKRRWLTDRFARSVITLGGGSVLVTLLLLIFYLVVVITPIFSGASMTRHADFSLATNNASNQQPIALGIDDDGKTAYHFTQDGWLIFSALPSITHQGALSSPLSTQPILQAQVVAEPLAFKAAETSSRWYGYSDHSGFIYAVHPKFSSVYTQSGEHAAPSLGTFAQNPIPLDEQGIPIVQFDFSIQPQQATFVGVNQQGQWQALRYQKKYNHLENRVFREPPTKAQWQLLRLQIPQINQIVKDFLVTPDGNTLYLLHPHSLSVLKRDGMAFSLRETVALSSSKLGLSGIDNKGDSKVGKATNQSQAEGVTLNLLPGAYSVLVTESDGQVSQWFDVLKEGERHFTRIRDFVKSRELVKHDSLVKNGAPVKNDSLVKNDSLVKKQHAQTGFLLPDFYRKGFFRFDDSGRVDNYFTTADNKVLSKKIATHAPVAAASSANENFLLTAYGDRWSLFGVNNPHPEISFHSLWQKVWYEGYPEPEFIWQSTSAANDFEPKFSLVPIAFGTLKSALFAMLFAVPISICGAIYTAYFMTAKMRRYVKPTIELMEALPTVIIGFLAGLWLAPIVELNLLNTLLFIVLLPLVFLVSAFVWHLLNRKLEGEFQGWVALMLIPIVLGFGLLISMYGHQLEAWLFGGDVRFYLAKLGINFDQRNALIVGFAMGFAVIPTIFTIAEDAIFSVPKHLSDGASALGATPWQCLTTVVLVTASPGIFSAVMMGLGRAVGETMIVLMATGNTPIMDWNIFEGMRTLSANIAIEMPESEVGSSHFRLLFLSAFLLFVFTFIVNSIAEYIRQRLRDKYSAL
SIO_010081: VCA1004_RS02590
subclass of: SO_0000673
so part of: VCA1004_RS02590
location: 550404..552842
location: region:550404-552842:1
so has part: feature:550404-552842:1:exon

WP_086982280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550404-552842:1:exon

VCA1004_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pstA
locus tag: VCA1004_RS02595
so part of: sequence
location: 552873..554540
location: region:552873-554540:1
so has part: feature:552873-554540:1:exon
subclass of: SO_0000010

position:552873:1
position: 552873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554540:1
position: 554540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552873-554540:1:exon

VCA1004_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pstA
locus tag: VCA1004_RS02595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017110484.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter permease PstA
translation: MGTMKVTDLSWLKSGRPWVWLTAGAVSVCLISVLGLLLLIGWKGLTYFWPTPLYQWQDDNAHRLIGQVYQRDYVSLNQVIQQRPQWPDAVLDAAEVERLSIKVANRELYQRDFISVLALDLHHQQQPQNLAVFERTHNGDFFGEPVAVMANDEVYQSDIPHHLEAMLQEARDVREQIDDLMDGELQTTNHGLEKLREERQYKEKRSALSDKEEQAFNQKQLQLQQAFSRAEQQVLALQAQLARKQIIVKDMQGKKVTLPLDTVLDAWYPNTMSFMDKVLHWGKQVKKFLIENPRESNSEGGVFPAIFGTVLLVIIMSVVVMPLGVIAAIYIHEYANNRPMTKLIRIAVVNLAGVPSIVYGVFGLGFFVYTVGNSIDELFYSDTLPTPTFGTPGLLWSAMTLAILTLPVVIVATEEGLSRVPNSLRHGSYALGATKFETLWRIVLPMVSPAMMTGLILAVARAAGEVAPLMLVGVVKLAPTLPVDAYFPYVHLERKFMHLGFHIYDIGFQTPNIEAARPLVFATSFLLISVVVGLNITAILIRNNLREKFKTLGTD
SIO_010081: VCA1004_RS02595
subclass of: SO_0000673
so part of: VCA1004_RS02595
location: 552873..554540
location: region:552873-554540:1
so has part: feature:552873-554540:1:exon

WP_179949573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552873-554540:1:exon

VCA1004_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pstB
locus tag: VCA1004_RS02600
so part of: sequence
location: 554542..555360
location: region:554542-555360:1
so has part: feature:554542-555360:1:exon
subclass of: SO_0000010

position:554542:1
position: 554542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555360:1
position: 555360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554542-555360:1:exon

VCA1004_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pstB
locus tag: VCA1004_RS02600
EC number: 7.3.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019274140.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate ABC transporter ATP-binding protein PstB
translation: MLSIHSALGHIEPLNVRELSDKQTAISIEELNLFYQQTQALKDINMRIPKGHVTAFIGPSGCGKSTLLRCINRMNDLVDGCRVEGRVNLHGNNIYHPKVDVASLRRRVGMVFQRPNPFPKSIYENVVYGLRLQGIKDSRTLDDAVERSLKAAALWKEVKDRLHENAFGLSGGQQQRLVIARAIAIEPEILLLDEPTSALDPISTLTIEELISELKTKYSVVIVTHNMQQAARVSDYTAFIHMGQLVEYSDTDSIFTSPKMKKTEDYITGRYG
SIO_010081: VCA1004_RS02600
subclass of: SO_0000673
so part of: VCA1004_RS02600
location: 554542..555360
location: region:554542-555360:1
so has part: feature:554542-555360:1:exon

WP_086982282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554542-555360:1:exon

VCA1004_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: phoU
locus tag: VCA1004_RS02605
so part of: sequence
location: 555386..556084
location: region:555386-556084:1
so has part: feature:555386-556084:1:exon
subclass of: SO_0000010

position:555386:1
position: 555386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556084:1
position: 556084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555386-556084:1:exon

VCA1004_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: phoU
locus tag: VCA1004_RS02605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024476.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0051049 - regulation of transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate signaling complex protein PhoU
translation: MQLGRHISGQFNVELESIRTHVLAMGGLVEEQISLALHALYKHDPQLAAKVRANDEKVNQMEVVIDEACTRIIAKRQPTAKDLRLIMAIIKTISDLERIGNVAMKISYVAQEGFSANLETLIVSVEKFGRMAVTMLHQVLDAFARMDVQAAAAVYQMDDQLDSEFKKVQQLMMKLMMDDPQSVPKVMQVISCTQAIERVGDRCQNICQYIIYFVEGKDVRHHSGYLESLMGK
SIO_010081: VCA1004_RS02605
subclass of: SO_0000673
so part of: VCA1004_RS02605
location: 555386..556084
location: region:555386-556084:1
so has part: feature:555386-556084:1:exon

WP_086982283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555386-556084:1:exon

VCA1004_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02610
so part of: sequence
location: complement(556115..556852)
location: region:556115-556852:-1
so has part: feature:556115-556852:-1:exon
subclass of: SO_0000010

position:556115:-1
position: 556115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556852:-1
position: 556852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556115-556852:-1:exon

VCA1004_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009387892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper homeostasis protein CutC
translation: MNIVLEVCVDNIESLHLAIAGGATRIELCSSLALGGLTPSYGFMKQAAQQSSVPVYAMIRPRQGDFLYSEQDIAIMLDDVHSAKRAGLQGIVIGLLTAQGDVDIAHCQQLIAAASGMGVTFHRAIDQCRDHQQALQDIMTLKCERVLTSGLASNAYEGMPILTQMVQQAQGKIAIMAGAGVNINNVKEIVQTTGVTEVHLSGKTTRPSLMSLHANTAKMGHDSIDDFAIPVTDKHIIQAVKQALN
SIO_010081: VCA1004_RS02610
subclass of: SO_0000673
so part of: VCA1004_RS02610
location: complement(556115..556852)
location: region:556115-556852:-1
so has part: feature:556115-556852:-1:exon

WP_086982284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556115-556852:-1:exon

VCA1004_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02615
so part of: sequence
location: complement(557208..557819)
location: region:557208-557819:-1
so has part: feature:557208-557819:-1:exon
subclass of: SO_0000010

position:557208:-1
position: 557208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557819:-1
position: 557819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557208-557819:-1:exon

VCA1004_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02615
EC number: 1.11.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020330628.1
GO function: GO:0051920 - peroxiredoxin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin C
translation: MVLVGRQAPDFTAAAVLGNGEIVDSFNFSEFTKGKKAVVFFYPLDFTFVCPSELIAFDKRFEDFQAKGVEVIGVSIDSQFSHNAWRNTAVADGGIGQVKYPLVADVKHEIVKAYDVEHPEAGVAFRGSFLIDEEGVVRHQVINDLPLGRNIDEMLRMVDALNFHQKHGEVCPAQWEEGKAGMKGSTEGVAAYLSEHEADLNKK
SIO_010081: VCA1004_RS02615
subclass of: SO_0000673
so part of: VCA1004_RS02615
location: complement(557208..557819)
location: region:557208-557819:-1
so has part: feature:557208-557819:-1:exon

WP_086982285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557208-557819:-1:exon

VCA1004_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: queA
locus tag: VCA1004_RS02620
so part of: sequence
location: 558185..559234
location: region:558185-559234:1
so has part: feature:558185-559234:1:exon
subclass of: SO_0000010

position:558185:1
position: 558185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559234:1
position: 559234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558185-559234:1:exon

VCA1004_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: queA
locus tag: VCA1004_RS02620
EC number: 2.4.99.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005534126.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0051075 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity [Evidence IEA]
GO process: GO:0008616 - queuosine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
translation: MQVSDFDFELPDELIARYPQPQRTASRLLQLNGNSGELNDGKFTDVLDLVQPGDLIVFNNTRVIPARVFGRKESGGKIEVLVERVVDEHTILAHVRASKSPKPGNTLFLGENDEFKAQMVARHDALFEIRFDDDMGVFDILNQIGHMPLPPYIDRPDEEADKERYQTVYNKKPGAVAAPTAGLHFDNELLAQIKAKGVEFAYVTLHVGAGTFQPVRVDDIQEHHMHSEYVEVPQEVVDAIAATKARGGRIIAVGTTSVRSLESAAQDAQQKGTQLAPFFGDTEIFIYPGYEYQLVDVLITNFHLPESTLIMLVSAFAGYEHVMNAYQHAVQQQYRFFSYGDAMFVTKKQ
SIO_010081: VCA1004_RS02620
subclass of: SO_0000673
so part of: VCA1004_RS02620
location: 558185..559234
location: region:558185-559234:1
so has part: feature:558185-559234:1:exon

WP_086982286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558185-559234:1:exon

VCA1004_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: tgt
locus tag: VCA1004_RS02625
so part of: sequence
location: 559418..560569
location: region:559418-560569:1
so has part: feature:559418-560569:1:exon
subclass of: SO_0000010

position:559418:1
position: 559418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560569:1
position: 560569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559418-560569:1:exon

VCA1004_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: tgt
locus tag: VCA1004_RS02625
EC number: 2.4.2.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024471.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA guanosine(34) transglycosylase Tgt
translation: MKYELIKKDGVARRGRLTFKRGTVETPAFMPVGTYGTVKGMTPEEVKDTGAEILLGNTFHLWLRPGQEIMKLHGDLHDFMNWQGPILTDSGGFQVFSLGDIRKITEEGVHFRNPVNGDKIFMDAEKSMEIQKDLGSDIVMIFDECTPYPATHEEARKSMEMSLRWAQRSRDHFDKLENPNALFGIVQGGVYGDLRDVSVKGLTEIGFDGYAVGGLAVGEPKEDMHHMLEHTCPQLPEDKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTGGVIKIRNASHKTDTSALDPECDCYTCKNYSKSYLHHLDRCNEILGARLNTIHNLRYYQRLMAAIRLAIDEDRFDEFVQEFYARRDREVPPLQKEVRMSDLSQ
SIO_010081: VCA1004_RS02625
subclass of: SO_0000673
so part of: VCA1004_RS02625
location: 559418..560569
location: region:559418-560569:1
so has part: feature:559418-560569:1:exon

WP_086982287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559418-560569:1:exon

VCA1004_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: yajC
locus tag: VCA1004_RS02630
so part of: sequence
location: 560669..561004
location: region:560669-561004:1
so has part: feature:560669-561004:1:exon
subclass of: SO_0000010

position:560669:1
position: 560669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561004:1
position: 561004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560669-561004:1:exon

VCA1004_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: yajC
locus tag: VCA1004_RS02630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005420568.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit YajC
translation: MSLFISQAHASASGAPAGGGMEMFIMLGMFALIFYFMIYRPQAKRVKEHKNLMASMSKGDEVLTSGGLIGKIVKISEDNSYILLALNENNEVTIKKDFVTAVLPKGTIKSL
SIO_010081: VCA1004_RS02630
subclass of: SO_0000673
so part of: VCA1004_RS02630
location: 560669..561004
location: region:560669-561004:1
so has part: feature:560669-561004:1:exon

WP_086982288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:560669-561004:1:exon

VCA1004_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: secD
locus tag: VCA1004_RS02635
so part of: sequence
location: 561043..562893
location: region:561043-562893:1
so has part: feature:561043-562893:1:exon
subclass of: SO_0000010

position:561043:1
position: 561043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562893:1
position: 562893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561043-562893:1:exon

VCA1004_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: secD
locus tag: VCA1004_RS02635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004747919.1
GO component: GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein translocase subunit SecD
translation: MLNRYPLWKYLMVAAVILISALYALPNIYGEDPAVQITGARGASVDMSTLDSINTVLKEKNIETQSVALENGSVLVRFKDTDTQLSARDIINQTMGQDFVVALNLAPATPSWLDAIGATPMKLGLDLRGGVHFLMEVDMDAAMEKLIGQQEESFRSDLRDERIRYRAIRPSGKDAVEVVLRNEEQREQAKKILSDKHRDMVFTNGNNNALIAKFNEARLLEIRNYAVEQNITILRNRVNELGVAEPLVQRQGASRIVVELPGVQDTARAKEILGATATLEFREVDDKADLAAAAAGRVPAGSEVKFDKDGRPAVLKKRVILGGSSITDASSSTDEYGRPQVNISLDSEGGNKMSDFSKKNIGKLMATVFTEYKDSGKRTPEGKVILTQHEEVINQATIQSALGRSFRITGIDSQAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQNIDKGIQACIWGLVAVMLFTLIYYRRFGLIANMALMSNLVLIIGIMSLIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELKEGRSPQQAIHQGYANAFSTIADANITTLITAIILFAVGTGAIKGFAVTLSIGILTSMFTAIIGTRCVVNLMYGGKRNIKKLSI
SIO_010081: VCA1004_RS02635
subclass of: SO_0000673
so part of: VCA1004_RS02635
location: 561043..562893
location: region:561043-562893:1
so has part: feature:561043-562893:1:exon

WP_086982289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561043-562893:1:exon

VCA1004_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: secF
locus tag: VCA1004_RS02640
so part of: sequence
location: 562903..563853
location: region:562903-563853:1
so has part: feature:562903-563853:1:exon
subclass of: SO_0000010

position:562903:1
position: 562903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563853:1
position: 563853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562903-563853:1:exon

VCA1004_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: secF
locus tag: VCA1004_RS02640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024468.1
GO component: GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein translocase subunit SecF
translation: MFQILKADKAIDFMRWSKFAFVLSGLMIAASLFSISTKWFNWGLDFTGGTLIEVTFEHPANLPVLREALAQDGFADATIQNFGSAQDVMVRMRPREGTKGETIGNQVLESLKQASGDQVELKRIEFVGPNVGDELAEAGGLAILISLLCILMYVSMRFEWRLSAGAVMSLAHDVTITLGIFSFLQIEIDLTIIAALLTVVGYSLNDTIVVFDRIRENFRKMRNSEPRDIMNSSITQTLSRTLITSGTTLFVVIALFTQGGANIHGFALALLLGITVGTYSSIYVASAVALRFGLTREHLMPTQVEKEGADQDPMMP
SIO_010081: VCA1004_RS02640
subclass of: SO_0000673
so part of: VCA1004_RS02640
location: 562903..563853
location: region:562903-563853:1
so has part: feature:562903-563853:1:exon

WP_086982290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562903-563853:1:exon

VCA1004_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: suhB
locus tag: VCA1004_RS02645
so part of: sequence
location: complement(564110..564913)
location: region:564110-564913:-1
so has part: feature:564110-564913:-1:exon
subclass of: SO_0000010

position:564110:-1
position: 564110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564913:-1
position: 564913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564110-564913:-1:exon

VCA1004_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: suhB
locus tag: VCA1004_RS02645
EC number: 3.1.3.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000553439.1
GO function: GO:0008934 - inositol monophosphate 1-phosphatase activity [Evidence IEA]
GO process: GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]; GO:0046854 - phosphatidylinositol phosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inositol-1-monophosphatase
translation: MHPMLNIAIRAARVAGNHIAKSLENTDKIESTQKGQNDFVTNIDKEAELLIIDTIKKSYPEHCIVGEEGGSVEGKDTDVQWIIDPLDGTTNFMKGFPHFSISIAVRMRGKTEVACVYDPIRNELFTAQRGSGAQLNNARLRINPIKDLNGAILATGFPFKQKQHSESYIKIVGGLFTECADFRRTGSAALDLCYLAAGRVDGFFELGLKPWDIAAGELIAREAGAILTDFAGGTNYLASGNLVASSARGVKSILKHVREHANEGMMK
SIO_010081: VCA1004_RS02645
subclass of: SO_0000673
so part of: VCA1004_RS02645
location: complement(564110..564913)
location: region:564110-564913:-1
so has part: feature:564110-564913:-1:exon

WP_086982291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564110-564913:-1:exon

VCA1004_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: trmJ
locus tag: VCA1004_RS02650
so part of: sequence
location: 565092..565832
location: region:565092-565832:1
so has part: feature:565092-565832:1:exon
subclass of: SO_0000010

position:565092:1
position: 565092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565832:1
position: 565832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565092-565832:1:exon

VCA1004_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: trmJ
locus tag: VCA1004_RS02650
EC number: 2.1.1.200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017629867.1
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ
translation: MLDNIKVILVGTSHSGNIGSAARAMKVMGLTELVLVSPQCEVDDQTLSLASGAGDVAENALIVDTLDEAIADCVLVVGSSARSRTLEWPMLEPRECGRKFIQHAQQGKVALVFGRERTGLTNEELQKCHYHVCIPANPQYSSLNLAMAVQTLSYEIRMAWLEQQAAQYPAAVIEEYPRHKELELFYQHLENVILKTQFISQDKPNLVMNKLRRLFSRTRPETQELNMLRGILTSVEKSLAEQNNKD
SIO_010081: VCA1004_RS02650
subclass of: SO_0000673
so part of: VCA1004_RS02650
location: 565092..565832
location: region:565092-565832:1
so has part: feature:565092-565832:1:exon

WP_086984611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565092-565832:1:exon

VCA1004_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: iscR
locus tag: VCA1004_RS02655
so part of: sequence
location: 565924..566448
location: region:565924-566448:1
so has part: feature:565924-566448:1:exon
subclass of: SO_0000010

position:565924:1
position: 565924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566448:1
position: 566448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565924-566448:1:exon

VCA1004_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: iscR
locus tag: VCA1004_RS02655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017099584.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly transcriptional regulator IscR
translation: MRLTSKGRYAVTAMLDVALHSSQGPVPLADISERQGISLSYLEQLFSRLRKAGLVASVRGPGGGYRLGVNASEIAVGTVIAAVDESVDATKCQGKGDCQGGVRCLTHTLWHDLSARISEFLDGITLGELMLNSEVLDISERQNIELVVNNSFGNNNYASDNHDKADTVGMNARS
SIO_010081: VCA1004_RS02655
subclass of: SO_0000673
so part of: VCA1004_RS02655
location: 565924..566448
location: region:565924-566448:1
so has part: feature:565924-566448:1:exon

WP_086982292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565924-566448:1:exon

VCA1004_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02660
so part of: sequence
location: 566483..567697
location: region:566483-567697:1
so has part: feature:566483-567697:1:exon
subclass of: SO_0000010

position:566483:1
position: 566483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567697:1
position: 567697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566483-567697:1:exon

VCA1004_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02660
EC number: 2.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012127087.1
GO function: GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0044571 - [2Fe-2S] cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IscS subfamily cysteine desulfurase
translation: MKLPIYFDYSATCPVDPRVAEKMVQFMTMDGTFGNPASRSHRFGWQAEEAVDHAREQIADILNADPREIVFTSGATESDNLAIKGVAHFYGKQGKHIITCKTEHKAVLDPCRQLEREGYEVTYLEPESNGLIDLEKFKAALRDDTVLVSIMHVNNEIGVIQDIAALGELCRANKTVFHVDAAQSAGKLPIDTQALKVDLISLSAHKIYGPKGIGALYVRRKPRIRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFAIAKQDMQKDYDHALALRNRLLDGLKDMEAVTINGDLEQRLPNNLNVSFAFVEGESLLMALKDLAVSSGSACTSASLEPSYVLRALGLDDELAHSSVRFSFGRFTTEEEVDYAVEQIRVAVDKLRDMSPLWDMYKEGIDLNTVEWAHH
SIO_010081: VCA1004_RS02660
subclass of: SO_0000673
so part of: VCA1004_RS02660
location: 566483..567697
location: region:566483-567697:1
so has part: feature:566483-567697:1:exon

WP_086982293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566483-567697:1:exon

VCA1004_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: iscU
locus tag: VCA1004_RS02665
so part of: sequence
location: 567732..568112
location: region:567732-568112:1
so has part: feature:567732-568112:1:exon
subclass of: SO_0000010

position:567732:1
position: 567732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568112:1
position: 568112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567732-568112:1:exon

VCA1004_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: iscU
locus tag: VCA1004_RS02665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005592829.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly scaffold IscU
translation: MAYSEKVIDHYENPRNVGSFDKEDPSIGSGMVGAPACGDVMKLQIKVSPEGIIEDAKFKTYGCGSAIASSSLVTEWVKGKSLDEAASIKNAEIAEELALPPVKVHCSILAEDAIKAAVSDYKKKHQ
SIO_010081: VCA1004_RS02665
subclass of: SO_0000673
so part of: VCA1004_RS02665
location: 567732..568112
location: region:567732-568112:1
so has part: feature:567732-568112:1:exon

WP_086982294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567732-568112:1:exon

VCA1004_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: iscA
locus tag: VCA1004_RS02670
so part of: sequence
location: 568228..568551
location: region:568228-568551:1
so has part: feature:568228-568551:1:exon
subclass of: SO_0000010

position:568228:1
position: 568228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568551:1
position: 568551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568228-568551:1:exon

VCA1004_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: iscA
locus tag: VCA1004_RS02670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000301573.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster assembly protein IscA
translation: MAITMTDAAANRVKTFLENRGKGIGLRLGVRTTGCSGMAYVLEFVDQLNEEDQIFEHDGVKVIIDPKSLVYLDGTELDFAKEGLNEGFKFNNPNVKGECGCGESFNV
SIO_010081: VCA1004_RS02670
subclass of: SO_0000673
so part of: VCA1004_RS02670
location: 568228..568551
location: region:568228-568551:1
so has part: feature:568228-568551:1:exon

WP_086982295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568228-568551:1:exon

VCA1004_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: hscB
locus tag: VCA1004_RS02675
so part of: sequence
location: 568664..569179
location: region:568664-569179:1
so has part: feature:568664-569179:1:exon
subclass of: SO_0000010

position:568664:1
position: 568664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569179:1
position: 569179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568664-569179:1:exon

VCA1004_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: hscB
locus tag: VCA1004_RS02675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016790474.1
GO function: GO:0051087 - chaperone binding [Evidence IEA]
GO process: GO:0097428 - protein maturation by iron-sulfur cluster transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone HscB
translation: MNYFELFGLANQFELDNAALSDTFRDLQRRFHPDKFASASERDRLMAVQKAAEINDAYQILKSPISRAEYLLVLQGVDIRDEQQTMNDPMFLMEQMELREEVEEIAHSADPESALFEFDGKVQKMYQQHLDQLQSQLQDNHWDEAANSVRKLKFVNKLRYEIEQLEDKLLG
SIO_010081: VCA1004_RS02675
subclass of: SO_0000673
so part of: VCA1004_RS02675
location: 568664..569179
location: region:568664-569179:1
so has part: feature:568664-569179:1:exon

WP_086982296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568664-569179:1:exon

VCA1004_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: hscA
locus tag: VCA1004_RS02680
so part of: sequence
location: 569245..571098
location: region:569245-571098:1
so has part: feature:569245-571098:1:exon
subclass of: SO_0000010

position:569245:1
position: 569245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571098:1
position: 571098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569245-571098:1:exon

VCA1004_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: hscA
locus tag: VCA1004_RS02680
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004735097.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S protein assembly chaperone HscA
translation: MMLLQIAEPGQSAAPHQHKFAVGIDLGTTNSLVAAVRSGSCSPLVDENQKAILPSVVHYSSEGILVGHEAKARAQQDPKNTISSAKRLIGRSLQDVQTRYVDLPYQFQASDNALPLIQTPTGLVNPIQVSSEILKALAQRAETTLGHELEGVVITVPAYFDDAQRAGTKDAAELAGLKVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSKGVFEVLATGGDSALGGDDFDDLLVGYFKQQVGQTDKLTAEQHRVLVDAATQAKIGLSDQSQVDVEVLGQTVTLTRQQFDDLITPLVKKTLLSCRRALKDADVMPDQVNEVVMVGGSTRTPLVRTLVGEFFGRTPLTSINPDEVVAIGAGIQADILVGNKPDSDMLLLDVIPLSLGIETMGGLVEKIIPRNTTIPVARAQEFTTFKDGQTAMLVHVVQGEREMVDDCRSLARFTLHGIPPMKAGAAHIRVTYQVDADGLLSVTAMEKSTGVQADIQVKPSYGLSDTEIADMLKSSMTYAKEDMQARALAEQKVEADRVIEGLLVALQENGEQLLSHDEYKAIEESLRTLIELRNGTDADAIEQGIKDTDKASQEFASRRMDVSIRAALAGQSVDNI
SIO_010081: VCA1004_RS02680
subclass of: SO_0000673
so part of: VCA1004_RS02680
location: 569245..571098
location: region:569245-571098:1
so has part: feature:569245-571098:1:exon

WP_086982297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:569245-571098:1:exon

VCA1004_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: fdx
locus tag: VCA1004_RS02685
so part of: sequence
location: 571185..571523
location: region:571185-571523:1
so has part: feature:571185-571523:1:exon
subclass of: SO_0000010

position:571185:1
position: 571185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571523:1
position: 571523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571185-571523:1:exon

VCA1004_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: fdx
locus tag: VCA1004_RS02685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017629863.1
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISC system 2Fe-2S type ferredoxin
translation: MPKIIVLPHEDLCPEGAVLEAETGESVLDVALKNGIGIEHACEKSCACTTCHVIIREGFDSLEESEELEDDMLDKAWGLEPESRLGCQAKVAHEDLVVEIPRYTINLASENH
SIO_010081: VCA1004_RS02685
subclass of: SO_0000673
so part of: VCA1004_RS02685
location: 571185..571523
location: region:571185-571523:1
so has part: feature:571185-571523:1:exon

WP_086982298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571185-571523:1:exon

VCA1004_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: iscX
locus tag: VCA1004_RS02690
so part of: sequence
location: 571607..571804
location: region:571607-571804:1
so has part: feature:571607-571804:1:exon
subclass of: SO_0000010

position:571607:1
position: 571607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571804:1
position: 571804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571607-571804:1:exon

VCA1004_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: iscX
locus tag: VCA1004_RS02690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024458.1
GO function: GO:0005506 - iron ion binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly protein IscX
translation: MGLKWTDSQDIAIELAEKFPDLDPQTVRFTDMHQWITELDEFDDEPNRSNEKILEAILLCWLDEI
SIO_010081: VCA1004_RS02690
subclass of: SO_0000673
so part of: VCA1004_RS02690
location: 571607..571804
location: region:571607-571804:1
so has part: feature:571607-571804:1:exon

WP_086982299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571607-571804:1:exon

VCA1004_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pepB
locus tag: VCA1004_RS02695
so part of: sequence
location: 572241..573533
location: region:572241-573533:1
so has part: feature:572241-573533:1:exon
subclass of: SO_0000010

position:572241:1
position: 572241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573533:1
position: 573533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572241-573533:1:exon

VCA1004_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pepB
locus tag: VCA1004_RS02695
EC number: 3.4.11.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016793720.1
GO function: GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO process: GO:0019538 - protein metabolic process [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminopeptidase PepB
translation: MSTSMSVTISREAAQSQWGENALLSFSTEGAIIHLSSPSSDIVQRAARKLDAQGIKSVELNGEGWDLELIWSFIQGFRSSKKGNIVTWSALEPAEQTELEARVKVTDWVRDIINKSAEEVAPRQLATMAGEFIKSIAPEGSVSYKIVKDKDLLTEGWEGIYAVGRGSERTSAMLQLDFNPTGDADAPVYACLVGKGITFDSGGYSIKPSGFMDSMKADMGGSGTITGGLALAIARGLNKRVKLILCCAENMISGRALKLGDIITYKNGKTVEVMNTDAEGRLVLADGLMYASEHKPKLIIDCATLTGAAKNALGNDYHALLSFDNKLAQKALKSAEQESEGLWQLPLAEFHRNMLPSNFADMSNISNGSYNPGASTAAAFLSYFVEDYKKGWLHFDCSGTYRKTSSDKWSAGATGMGVRTLARILIDQAK
SIO_010081: VCA1004_RS02695
subclass of: SO_0000673
so part of: VCA1004_RS02695
location: 572241..573533
location: region:572241-573533:1
so has part: feature:572241-573533:1:exon

WP_086982300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572241-573533:1:exon

VCA1004_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: ndk
locus tag: VCA1004_RS02700
so part of: sequence
location: 573593..574021
location: region:573593-574021:1
so has part: feature:573593-574021:1:exon
subclass of: SO_0000010

position:573593:1
position: 573593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574021:1
position: 574021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573593-574021:1:exon

VCA1004_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: ndk
locus tag: VCA1004_RS02700
EC number: 2.7.4.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019274078.1
GO function: GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO process: GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside-diphosphate kinase
translation: MGLERTFSIIKPDAVQRNLVGAIYQRIEQAGLTIVAAKMVHLTAEQATGFYAEHQGKPFFEPLKEFMISGPIMVQVLEGDNAIARYRELMGKTNPEEAACGTLRADYALSMRHNSVHGSDSPESAAREIEFFFPESEIFERS
SIO_010081: VCA1004_RS02700
subclass of: SO_0000673
so part of: VCA1004_RS02700
location: 573593..574021
location: region:573593-574021:1
so has part: feature:573593-574021:1:exon

WP_086982301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:573593-574021:1:exon

VCA1004_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02705
so part of: sequence
location: 574182..575300
location: region:574182-575300:1
so has part: feature:574182-575300:1:exon
subclass of: SO_0000010

position:574182:1
position: 574182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575300:1
position: 575300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574182-575300:1:exon

VCA1004_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02705
EC number: 2.1.1.-
EC number: 2.1.1.192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012534128.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
translation: MTMTKVNLLDFDRKGLRQFFTEELNEKAFRADQIMKWIYHFGCDDFSKMNNINKALRAKLEARCEIRAPYVSEAQHSSDGTIKWAMRVGDQDVETVYIPDEDRATLCVSSQVGCALECKFCSTAQQGFNRNLKVSEIIGQVWRAAREIGLQKETGRRPITNVVMMGMGEPLLNMKNLIPALEIMLDDLGFGLSKRRVTVSTSGVVSGLDQMTGNIDVALAISLHAPNDELRSQIMPINDRWDIQDFLGSVRRYIASSNANRGKVTVEYVLLDHVNDDMEHARQLAELLKDTPAKINLIPFNPYPGSPYNKPSNSRIDRFMKTLMQYDYTVTVRKTRGDDIDAACGQLVGDVIDRTKRTKQKQQGEPIPVKAI
SIO_010081: VCA1004_RS02705
subclass of: SO_0000673
so part of: VCA1004_RS02705
location: 574182..575300
location: region:574182-575300:1
so has part: feature:574182-575300:1:exon

WP_086982302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574182-575300:1:exon

VCA1004_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: pilW
locus tag: VCA1004_RS02710
so part of: sequence
location: 575352..576104
location: region:575352-576104:1
so has part: feature:575352-576104:1:exon
subclass of: SO_0000010

position:575352:1
position: 575352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576104:1
position: 576104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575352-576104:1:exon

VCA1004_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: pilW
locus tag: VCA1004_RS02710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004401975.1
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV pilus biogenesis/stability protein PilW
translation: MKNRVCILVVSFLTGCVTVTDKPNTAKFDNIKASEARISLGLGYLEEGNMVKARENLETAVKYAPTYYRALNSIAYYYQRVGENKLAEQAYQEALDSSPKNGDVLNNYGAFLCRQGEYKKADEYFNRAIEQPYYYLVAASYENAGLCALKSGDKEKAENYFSRALDHDPGRARSLLQMAELEIEKDEFSHARIRLLQFNQRYGYRPTSLDLLIKLEHKANNPELVSKYGNILKTKYPDSVQYQKYRQNEY
SIO_010081: VCA1004_RS02710
subclass of: SO_0000673
so part of: VCA1004_RS02710
location: 575352..576104
location: region:575352-576104:1
so has part: feature:575352-576104:1:exon

WP_232012635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575352-576104:1:exon

VCA1004_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: rodZ
locus tag: VCA1004_RS02715
so part of: sequence
location: 576094..577113
location: region:576094-577113:1
so has part: feature:576094-577113:1:exon
subclass of: SO_0000010

position:576094:1
position: 576094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577113:1
position: 577113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576094-577113:1:exon

VCA1004_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: rodZ
locus tag: VCA1004_RS02715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009848293.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytoskeleton protein RodZ
translation: MSTENNETDPKVEVNTTLPGEMLRQRRLELGLSQKDIAEKLRLKVSVIESIETNQFDNHHVATFIRGYFRSYAKMVGIKEKDILIALEQSGRGQHKEQPMHSFSKKTERKQHDNRIMNLTWGILVIILGISSVWWWQNHQQDTLSPSSLSSEHDATNSTVNDDFQSIEATASSAETATIESAPTSSMTTDSNDQAATAVDSESAVSDATPSLASNQSDQENELASTTNADSSNVTSLSTTANEASSTESEAIAQITQQQTNNNELSMQFKDDCWIQVKDSSGKVLSIGLKKAGQSLTLSGQMPYSIILGAPEGVSITLADEPVDLSRYTAGKVARLTLP
SIO_010081: VCA1004_RS02715
subclass of: SO_0000673
so part of: VCA1004_RS02715
location: 576094..577113
location: region:576094-577113:1
so has part: feature:576094-577113:1:exon

WP_086982304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576094-577113:1:exon

VCA1004_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
alternative label: gcpE
gene: ispG
locus tag: VCA1004_RS02720
gene synonym: gcpE
so part of: sequence
location: 577121..578242
location: region:577121-578242:1
so has part: feature:577121-578242:1:exon
subclass of: SO_0000010

position:577121:1
position: 577121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578242:1
position: 578242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577121-578242:1:exon

VCA1004_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
alternative label: gcpE
gene: ispG
locus tag: VCA1004_RS02720
gene synonym: gcpE
EC number: 1.17.7.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024452.1
GO function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO process: GO:0044237 - cellular metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
translation: MQHESPIKRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVAQIKSLEKVGADIVRVSVPTMDAAEAFKQIKQQVAIPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRSVVDCARDNNIPIRIGVNGGSLEKDIQQKYGEPTAAALVESAMRHVDILDRLNFDQFKVSVKASDVFLAVDSYRLLAQKIDQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISLAANPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEERLEDIITPMDVSIIGCVVNGPGEAEVSHMGIAGGNKKSAFYEDGKRQKERFDNDNVIDQLEAKIRAKASMLDSKNRIDISHIDK
SIO_010081: VCA1004_RS02720
subclass of: SO_0000673
so part of: VCA1004_RS02720
location: 577121..578242
location: region:577121-578242:1
so has part: feature:577121-578242:1:exon

WP_164520814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:577121-578242:1:exon

VCA1004_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: hisS
locus tag: VCA1004_RS02725
so part of: sequence
location: 578272..579540
location: region:578272-579540:1
so has part: feature:578272-579540:1:exon
subclass of: SO_0000010

position:578272:1
position: 578272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579540:1
position: 579540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578272-579540:1:exon

VCA1004_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: hisS
locus tag: VCA1004_RS02725
EC number: 6.1.1.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078525.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine--tRNA ligase
translation: MSKTIQAIRGMNDCLPTQSPLWHKVEDAVKRVVSSYGYSEIRMPIVEMTNLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIENGLIYNQEQRLWYVGPMFRHERPQKGRYRQFHQVGVEVFGLQGPDVDAELIMMTARLWRELGLDKHVRLELNSIGSLEARQHYRSVLIEFLEQHMDVLDEDSKRRMYTNPLRVLDTKNPDIQAILVDAPQLADYLDDDSKAHFAGLCELLDAAGIEYQVNQRLVRGLDYYNKTVFEWITESLGSQGTVCGGGRYDGLVEQLGGKPAPAVGFAMGLERLVLMLETLELNDVRKAVDVYLVTAGEGTLINGMKLAEQLRESVSGLRLMTHFGGGNFKKQFKRADKVGASIALVLGENEVAEGTVVVKDLTGGEQQTMAQSEVAAYLASII
SIO_010081: VCA1004_RS02725
subclass of: SO_0000673
so part of: VCA1004_RS02725
location: 578272..579540
location: region:578272-579540:1
so has part: feature:578272-579540:1:exon

WP_086982306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578272-579540:1:exon

VCA1004_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02730
so part of: sequence
location: 579572..580189
location: region:579572-580189:1
so has part: feature:579572-580189:1:exon
subclass of: SO_0000010

position:579572:1
position: 579572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580189:1
position: 580189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579572-580189:1:exon

VCA1004_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005527531.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MSIYDADEEQQVEAIKDWWRANGKAVVIGIVVGIGGIIGWRYYQDSLANAQESASHSYTAVVSNLEAKGLEATESAQDFINNYDTTSYAVLTSLQLAQVQVQANKLDDALTQLQWAKAHTKDDTLIPMIAYRTARVQAAKGQYDEAINTVTEVKSDAWKARNQELLGDIYLLKGDKDSAEKAYTQAQQDGSNSQVLQIKLDDLAK
SIO_010081: VCA1004_RS02730
subclass of: SO_0000673
so part of: VCA1004_RS02730
location: 579572..580189
location: region:579572-580189:1
so has part: feature:579572-580189:1:exon

WP_086982307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:579572-580189:1:exon

VCA1004_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: bamB
locus tag: VCA1004_RS02735
so part of: sequence
location: 580202..581368
location: region:580202-581368:1
so has part: feature:580202-581368:1:exon
subclass of: SO_0000010

position:580202:1
position: 580202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581368:1
position: 581368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580202-581368:1:exon

VCA1004_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: bamB
locus tag: VCA1004_RS02735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006710163.1
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamB
translation: MKKMFNRSLAMSLVALGLFGCAGEEDTIVMAPLPVVESQFTPATEWTASIGDGVGHYFSKLSPVYAYGKVFVASRDGEVKALDPETGKTLWEVDLEGDQPARLSGGLTASYDKLYIGDENGQAFALSVDDGSVVWKKDIDGEVLAKPLADESLVMFHTSKGTLVALKEDSGEPFWEINNDVPNLTLRGDSSPVSISGGVFWGMANGRLAAALIQRGQLLWQQPIGTPKGSTEIDRLVDVDASPLIIGSNLYAVGVNGQLVAIDLRSGAPMWKRTYSSATDLASDGSRIFVVTDKDHIAAVDVRSGTPLWTNDSLEYRQLTAPVLINQYLVVADGEGYLHWIDRATGKFVAQQLIDEDGIAVPPVETDDGFVIITREGDIKKMQIPEGS
SIO_010081: VCA1004_RS02735
subclass of: SO_0000673
so part of: VCA1004_RS02735
location: 580202..581368
location: region:580202-581368:1
so has part: feature:580202-581368:1:exon

WP_086982308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580202-581368:1:exon

VCA1004_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: der
locus tag: VCA1004_RS02740
so part of: sequence
location: 581613..583118
location: region:581613-583118:1
so has part: feature:581613-583118:1:exon
subclass of: SO_0000010

position:581613:1
position: 581613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583118:1
position: 583118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581613-583118:1:exon

VCA1004_RS02740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: der
locus tag: VCA1004_RS02740
EC number: 3.6.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004729389.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTPase Der
translation: MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKSGEHEFIVIDTGGIDGTEDGVETKMAEQSLAAIEEADVVLFMVDGRAGLTVADEAIARHLRMREKPSMLVVNKVDGIDADAACAEFWQLGMDKIYQIAAAHGRGVMSLIDKALKPFSDQLAEEEAKLNGEIEDLTGLVDAEEEQLEYTEEEAEAEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINEAVEKFSVIKTLKAIEDANVVLVIIDARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDTDVKERVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMAQDDHQPPLIRGRRVKMKYAHAGGYNPPIIVVHGNQVKELPDSYKRYLMNYFRRSLEIMGTPIRIQFQNSENPFETQAPTKKSGYSDDQKRKKMMSLIKRGRKK
SIO_010081: VCA1004_RS02740
subclass of: SO_0000673
so part of: VCA1004_RS02740
location: 581613..583118
location: region:581613-583118:1
so has part: feature:581613-583118:1:exon

WP_086982309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581613-583118:1:exon

VCA1004_RS02745
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02745
so part of: sequence
location: 583480..583728
location: region:583480-583728:1
so has part: feature:583480-583728:1:exon
subclass of: SO_0000010

position:583480:1
position: 583480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583728:1
position: 583728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583480-583728:1:exon

VCA1004_RS02745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008081190.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc ribbon domain-containing protein
translation: METNLCPDCQKALTWISIENQAQDHFHCSSCENEWVMRMMCPDCPSELERIQACGSTSYFCPSCNELKSKSRVIQDWQKKKQ
SIO_010081: VCA1004_RS02745
subclass of: SO_0000673
so part of: VCA1004_RS02745
location: 583480..583728
location: region:583480-583728:1
so has part: feature:583480-583728:1:exon

WP_086982310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583480-583728:1:exon

VCA1004_RS02750
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: xseA
locus tag: VCA1004_RS02750
so part of: sequence
location: complement(583807..585138)
location: region:583807-585138:-1
so has part: feature:583807-585138:-1:exon
subclass of: SO_0000010

position:583807:-1
position: 583807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585138:-1
position: 585138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583807-585138:-1:exon

VCA1004_RS02750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: xseA
locus tag: VCA1004_RS02750
EC number: 3.1.11.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006959690.1
GO component: GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO function: GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO process: GO:0006308 - DNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease VII large subunit
translation: MTTNTNANIFTVSRLNAEVRMLLENEMGIVWLVGELSNFSAPVSGHWYFSLKDARAQVKCAMFKGNNRRVTFKPNNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQMFDELKMKLAGEGLFAQHLKKPLPDNPKRIGIVTSKTGAALYDILDVLKRRDPSLPVVIYPTMVQGEEAAYKIAQAIGRANSRNECDILIVGRGGGSLEDLWCFNHEIVVRTIAASQIPVVSAVGHEIDVTIADFVADVRAPTPSAAAELVSRDNSHKAHTLLAKQRDLLAAWRHYSHQQKSRLSQLQFSLEKQHPRYQLDKQSQRLDELQIRLSRAIHAHLQRLQVQLHRTEQSLGFYSPTKTIERHQDRLHTYQARLIQAIHRTLRDQQYKLALQAEKLDTVSPLSTLKRGYSITRDSKGAVLTSRQQLQSGDTIITRFSDGEVASVIV
SIO_010081: VCA1004_RS02750
subclass of: SO_0000673
so part of: VCA1004_RS02750
location: complement(583807..585138)
location: region:583807-585138:-1
so has part: feature:583807-585138:-1:exon

WP_086984612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583807-585138:-1:exon

VCA1004_RS02755
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: guaB
locus tag: VCA1004_RS02755
so part of: sequence
location: 585507..586970
location: region:585507-586970:1
so has part: feature:585507-586970:1:exon
subclass of: SO_0000010

position:585507:1
position: 585507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586970:1
position: 586970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585507-586970:1:exon

VCA1004_RS02755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: guaB
locus tag: VCA1004_RS02755
EC number: 1.1.1.205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004413113.1
GO function: GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IMP dehydrogenase
translation: MLRIAKEALTFDDVLLVPAHSTVLPNTADLRTQLTKKITLNVPMISAAMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAEQVRLVKIYEAGVVSNPVTVRPTDTIADVKALTQKHGFAGFPVVTESNELVGIITGRDVRFVTDLTKKVEVLMTPKDRLASVKEGASMSDVQQCMQAHRVEKVLVVNDAFQLSGMITAKDFQKAESKPNACKDERGRLRVGAAVGAGAGNEERVKALVEAGVDVLLIDSSHGHSQGVLDRIKETRALYPDLQIIGGNVATAAGARALIDAGVDAVKVGIGPGSICTTRIVTGVGVPQITAISEAASAAEEFGIPVIADGGIRFSGDICKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKSYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSSMGLTGSATIEDMRTKAEFVRISGAGMQESHVHDVQITKEAPNYRLG
SIO_010081: VCA1004_RS02755
subclass of: SO_0000673
so part of: VCA1004_RS02755
location: 585507..586970
location: region:585507-586970:1
so has part: feature:585507-586970:1:exon

WP_086982311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:585507-586970:1:exon

VCA1004_RS02760
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
gene: guaA
locus tag: VCA1004_RS02760
so part of: sequence
location: 587260..588837
location: region:587260-588837:1
so has part: feature:587260-588837:1:exon
subclass of: SO_0000010

position:587260:1
position: 587260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588837:1
position: 588837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587260-588837:1:exon

VCA1004_RS02760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
gene: guaA
locus tag: VCA1004_RS02760
EC number: 6.3.5.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017056215.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO process: GO:0006177 - GMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing GMP synthase
translation: MTTNIHAQRILILDFGSQYTQLIARRIREIGVYCELWSWDVDEADIREFNPNGIILSGGPESVTEAGSPRAPEYVFNAGVPVFGICYGMQTMSEQLGGKVAGSNEREFGYAQVKMVEECELFKNIEDAIAEDGKPLLDVWMSHGDKVVEIPNDFTKVAQTDTCPYAAMANDEKRFYGVQFHPEVTHTRQGLRMLENFVLNICGCDKLWTPSSIIEDAVARIKEQVGDDEVILGLSGGVDSSVVAMLIHRAIGPKLTCVFVDNGLLRLNEAEQVMEMFGDHFGLNIIHVDAENRFLDALGGEAEPEAKRKIIGRVFVEIFDEESKKLKNAKWLAQGTIYPDVIESAASKTGKAHVIKSHHNVGGLPDDMAMGLVEPLRELFKDEVRKIGLELGLPYNMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELHAADLYHKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAQLPYDFLGKVSNRIINEIDGISRVVYDISGKPPATIEWE
SIO_010081: VCA1004_RS02760
subclass of: SO_0000673
so part of: VCA1004_RS02760
location: 587260..588837
location: region:587260-588837:1
so has part: feature:587260-588837:1:exon

WP_086982313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587260-588837:1:exon

VCA1004_RS02765
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02765
so part of: sequence
location: complement(588919..589203)
location: region:588919-589203:-1
so has part: feature:588919-589203:-1:exon
subclass of: SO_0000010

position:588919:-1
position: 588919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589203:-1
position: 589203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588919-589203:-1:exon

VCA1004_RS02765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02765
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDKQLERSLHSIGKACFVKYYDLFQNPNWSREDLIEHLMKAEGYYESGCKTRISQSKRIFDKNRALDALDIIINSNRLPVEIIEKARKLKIQK
SIO_010081: VCA1004_RS02765
subclass of: SO_0000673
so part of: VCA1004_RS02765
location: complement(588919..589203)
location: region:588919-589203:-1
so has part: feature:588919-589203:-1:exon

WP_086982315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588919-589203:-1:exon

VCA1004_RS02770
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02770
so part of: sequence
location: complement(589229..590293)
location: region:589229-590293:-1
so has part: feature:589229-590293:-1:exon
subclass of: SO_0000010

position:589229:-1
position: 589229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590293:-1
position: 590293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589229-590293:-1:exon

VCA1004_RS02770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02770
inference: COORDINATES: protein motif:HMM:NF014893.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
translation: MMKLGFIGFGKSTNRYHMPFIDAANKFEVTGYYTRGTRQFDMLYPNLNNHIQRFETLQSLLDSPVELIVITTPASTHYELAKQAICAGKHVIVEKPFCDTLAQAQDLFQLAKQHQVRITPYQNRRYDSDFLTIKNVLKRQDIGKVMEIESNHTHYRTDGAEHSGYLYDGSVYGHAVHFLDQIVSLYGEPDEVIYDIANQKNYYLGEGLSYQMDHTQENGVPEDHYDIKLVYGNLRVRIRFSQLIVKEPPRWIINATNATVEKYQIDQQERDLKQGIFLDTPSFGQDTAQGTCTIYFNDHHELIAPIHQHYTQFYLDTYQAIRDNTEMPVTEQQGLIVLNIMESIVGHRKYQKLI
SIO_010081: VCA1004_RS02770
subclass of: SO_0000673
so part of: VCA1004_RS02770
location: complement(589229..590293)
location: region:589229-590293:-1
so has part: feature:589229-590293:-1:exon

WP_086982317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589229-590293:-1:exon

VCA1004_RS02775
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02775
so part of: sequence
location: 590392..591216
location: region:590392-591216:1
so has part: feature:590392-591216:1:exon
subclass of: SO_0000010

position:590392:1
position: 590392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591216:1
position: 591216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590392-591216:1:exon

VCA1004_RS02775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017024443.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ion transporter
translation: MEQTKTFRHLQNAFKRIDKSNTFQWFVIAVIVISALTVGAHTYSLPPTIESALNIMDIAITVFFLIELVIRYLASDGFRAFFKKGWNIFDTIIVIGSLYPAAGSTMFVARLLRIFRVLRLVSMVPELRVLVNALIKAIPQMGYIGLLMFVIFYIYAAVGSMLFADINPTLWSDVSISMLTLFRVATFEDWTDVMYETMQVYSLSWIYYLTFIFLTAFIFLNMMVGTILEVMSEEHKQLREERAPEQDKLATSKEIQELHQKLEQLQRSLHQLKD
SIO_010081: VCA1004_RS02775
subclass of: SO_0000673
so part of: VCA1004_RS02775
location: 590392..591216
location: region:590392-591216:1
so has part: feature:590392-591216:1:exon

WP_086982319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:590392-591216:1:exon

VCA1004_RS02780
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02780
so part of: sequence
location: 591659..592903
location: region:591659-592903:1
so has part: feature:591659-592903:1:exon
subclass of: SO_0000010

position:591659:1
position: 591659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592903:1
position: 592903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591659-592903:1:exon

VCA1004_RS02780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004397371.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mechanosensitive ion channel family protein
translation: MYQNVLNWFEELGVPLQQMLPVAKALGLIVIIAIIIHLFLHRGVLRWIKNRANVSGGIWRGIVANENLFSRLALLIQGSVIGIQAKLWLSQESFIREAIMTAVALWVVIYTLLVVFSILDVIERAVSRTQAGKNMPIRGIMQSLKIIFFVVAALLITSILIGKSPVILLSGLGAMTAVIMLVFKDPILGLVAGVQLSANKMLSVGDWLEMPKYGADGDVIDISLTTVKVQNWDKTITTIPTYALISDSFKNWKGMQDSGGRRIKRSVLIDATSVHFLKKEEIGYLTKAQLLKPYLLNKVEELTEYNSSNDFDHECGINGRKLTNLGSFRAYLEHYLYAHPRIHKEMTLMVRQMSPTHEGISLEVYCFTNTTAWLEYESIQSDIFDHIYAVLPEFDLRVSQAPTGNDFRQWQARP
SIO_010081: VCA1004_RS02780
subclass of: SO_0000673
so part of: VCA1004_RS02780
location: 591659..592903
location: region:591659-592903:1
so has part: feature:591659-592903:1:exon

WP_086982321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591659-592903:1:exon

VCA1004_RS02785
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02785
so part of: sequence
location: complement(592935..593792)
location: region:592935-593792:-1
so has part: feature:592935-593792:-1:exon
subclass of: SO_0000010

position:592935:-1
position: 592935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593792:-1
position: 593792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592935-593792:-1:exon

VCA1004_RS02785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1891186
locus tag: VCA1004_RS02785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017420837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MQWQGISEFVAVAETGSFTLAAKQLNVSTAQVSRQINQLEKRLAIRLFYRTTRQVKLTDLGQSYFEQCRAILDQLTEAERSVTNLNHSPQGRLKISVPIAYGESHVAPLINDFYLAYPELNIELWLTNQVVDLTEEKVDLAIRLGPLEDSSMMAKKLRSRQQYLCAAPKYLRQWGQPENLNDLKKHNCLVGTLNYWRFHHRKITIKGGLSCNNGYALLDAALKGIGIVQLPDYYVQSYLESGQLISLFESHQPKNDGVWAVYPHNHTLSTKVRLLLDYLDQHLPA
SIO_010081: VCA1004_RS02785
subclass of: SO_0000673
so part of: VCA1004_RS02785
location: complement(592935..593792)
location: region:592935-593792:-1
so has part: feature:592935-593792:-1:exon

WP_086982323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:592935-593792:-1:exon

VCA1004_RS02790
type: Gene
subclass of: SO_0000704
RO_0002162: 1891186
locus tag: VCA1004_RS02790
so part of: sequence
location: 593979..595103
location: region:593979-595103:1
so has part: feature:593979-595103:1:exon
subclass of: SO_0000010

position:593979:1
position: 593979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595103:1
position: 595103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593979-595103:1:exon