Candidatus Fukatsuia symbiotica strain 5D chromosome, complete genome.
type: Entry
definition: Candidatus Fukatsuia symbiotica strain 5D chromosome, complete genome.
sequence version: NZ_CP021659.1
sequence date: 2023-03-18
sequence: sequence
division: CON
label: NZ_CP021659.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07168131
keyword: RefSeq
source: Candidatus Fukatsuia symbiotica
organism: Candidatus Fukatsuia symbiotica
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Candidatus Fukatsuia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP021659.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nBacteria and source DNA available from Kerry M. Oliver, 120 Cedar\nStreet, 413 Biological Sciences Building, Athens, 30602,GA.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 15-MAY-2017\nAssembly Method :: HGAP.3 v. 3\nAssembly Name :: 5D_Xtype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 290.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/18/2023 02:52:12\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,119\nCDSs (total) :: 3,050\nGenes (coding) :: 2,663\nCDSs (with protein) :: 2,663\nGenes (RNA) :: 69\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 387\nCDSs (without protein) :: 387\nPseudo Genes (ambiguous residues) :: 0 of 387\nPseudo Genes (frameshifted) :: 241 of 387\nPseudo Genes (incomplete) :: 170 of 387\nPseudo Genes (internal stop) :: 43 of 387\nPseudo Genes (multiple problems) :: 57 of 387\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 2824008
topology: circular
so has quality: SO_0000988
location: 1..2824008
location: region:1-2824008:1
RO_0002162: 1878942

NZ_CP021659
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07168131
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of Candidatus Fukatsuia symbiotica and Candidatus Hamiltonella defensa from Acyrthosiphon pisum strain 5D
author: Patel, V.A.
author: Chevignon, G.
author: Russell, J.A.
author: Oliver, K.M.
journal: Unpublished

2
title: Direct Submission
author: Patel, V.A.
author: Chevignon, G.
author: Russell, J.A.
author: Oliver, K.M.
journal: Submitted (30-MAY-2017) Department of Entomology, The University of Georgia, 120 Cedar St, Athens, GA 30602, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2824008:1
position: 2824008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2824008:1:source
so part of: sequence
organism: Candidatus Fukatsuia symbiotica
mol type: genomic DNA
strain: 5D
isolation source: cell culture
host: Acyrthosiphon pisum
country: USA
collection date: 2016-03

1878942
type: Taxonomy
SIO_000068: taxonomy

CCS41_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: mioC
locus tag: CCS41_RS00005
old locus tag: CCS41_00005
so part of: sequence
location: complement(29..478)
location: region:29-478:-1
so has part: feature:29-478:-1:exon
subclass of: SO_0000010

position:29:-1
position: 29
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478:-1
position: 478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29-478:-1:exon

CCS41_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: mioC
locus tag: CCS41_RS00005
old locus tag: CCS41_00005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005271485.1
GO function: GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FMN-binding protein MioC
translation: MSHITLISGSTLGNAEDVAECLSEQLNASGFTTEVMHGPKLNELVLNGEWLVITSTHGAGELPDNLQPLLEQIEQQKPDLSQIRFGAIGLGDSSYDHFCGAIKKLDQELLRRGAKRIGQILEINVLKCSVPEDPAEEWLVDWIKLHTTE
SIO_010081: CCS41_RS00005
subclass of: SO_0000673
so part of: CCS41_RS00005
location: complement(29..478)
location: region:29-478:-1
so has part: feature:29-478:-1:exon

WP_072549795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29-478:-1:exon

CCS41_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: viaA
locus tag: CCS41_RS00010
old locus tag: CCS41_00010
so part of: sequence
location: complement(599..2065)
location: region:599-2065:-1
so has part: feature:599-2065:-1:exon
subclass of: SO_0000010

position:599:-1
position: 599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2065:-1
position: 2065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599-2065:-1:exon

CCS41_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: viaA
locus tag: CCS41_RS00010
old locus tag: CCS41_00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012776243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase RavA stimulator ViaA
translation: MLSLATLDMLLSISEGTLVEEIVIGVLATPQLATLFAKFPRIKRALTKDIPRWKQNFQQRIQEARVPSNLAEEFFLYQHSQQENSTLFYQHLTAIVDELTTLNSPFLTQAKNIIDASDFEQNPPSGESLQCLFLQRWRLSLTLQTLNIHHTLLEQEKEKLLAELQQRLALSGALEPLLADNDTAAGRLWDMSHGQLQQNDYQLLQQYTDFLQQQTELQQIAEQLGRSKTAKTQPNAETHVGSYTLMVRQPDTFPEEVSGIQQSNDILRLLPTELMLLGINELEFEFYRRLLERRLLTYRLQGDHWQKQQWQRTVNQQGGEQQPRGPFIVCVDTSGSMGQFSEQCAKAFCLALLRIALADSRRCYVMLFATEVVHYELSADNGIEQAIRFLGQRFRGGTDLAACLANTLAKMEEQQWIDTDAIIISDFIAQRLPQDLIKKIKTQQQIHQHRFHAIAMSSYGKPGIMQIFDHIWRFDNGLKSRLLRRWRH
SIO_010081: CCS41_RS00010
subclass of: SO_0000673
so part of: CCS41_RS00010
location: complement(599..2065)
location: region:599-2065:-1
so has part: feature:599-2065:-1:exon

WP_072549794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599-2065:-1:exon

CCS41_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: ravA
locus tag: CCS41_RS00015
old locus tag: CCS41_00015
so part of: sequence
location: complement(2059..3579)
location: region:2059-3579:-1
so has part: feature:2059-3579:-1:exon
subclass of: SO_0000010

position:2059:-1
position: 2059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3579:-1
position: 3579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2059-3579:-1:exon

CCS41_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: ravA
locus tag: CCS41_RS00015
old locus tag: CCS41_00015
EC number: 3.6.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011815252.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase RavA
translation: MQKSSQLVERISRLSNALERGLYERQEAIRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFRDARAFEYLMTRFSTPEEVFGPLSIQALKEEGRYQRLTKGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNGDHEDEIPMRLLITASNELPDADSSLEALYDRMLVRLWLDKVQDKQNFHALLLNRQDDHHNPVAENLSINDEEFRQWQPLIDKIDLPDHCFELIFLLRQRLNTLDQAPYISDRRWKKSLRLLQASAFFSGRETIAPIDLILLKNCLWHDLDSQKLLQQQLEQLLCEQAYQQQRLLMQLQHIHRRWLQFQQQQHDQQALTLVKKSSGFSRKIHYFLPETLLETTLTLLLQKPLYLHDIQVNYLQIDKETLSLWINKGGKLHTKLNGIGFTQPIDAEINQQGQIVVLDISRQTSALSLPKALIENPPPELLTEKADVATHLSEQRKFFNQQQACLFIPSSWRVKIEASLLHVAEELKLTCNKDGTDHHRC
SIO_010081: CCS41_RS00015
subclass of: SO_0000673
so part of: CCS41_RS00015
location: complement(2059..3579)
location: region:2059-3579:-1
so has part: feature:2059-3579:-1:exon

WP_072549793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2059-3579:-1:exon

CCS41_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: kup
locus tag: CCS41_RS00020
old locus tag: CCS41_00020
so part of: sequence
location: 4099..5967
location: region:4099-5967:1
so has part: feature:4099-5967:1:exon
subclass of: SO_0000010

position:4099:1
position: 4099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5967:1
position: 5967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4099-5967:1:exon

CCS41_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: kup
locus tag: CCS41_RS00020
old locus tag: CCS41_00020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011906476.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: low affinity potassium transporter Kup
translation: MSTEHKQSLSAVTLAAIGVAYGDIGTSPLYTLRECFSGNYGFDVRPGVVFGFLSLIFWLLILVVSLKYLTFVMRADNAGEGGILTLMLLAGRNTSARTTSTLVMMGLIGASFFYGEVVITPAISVMSAIEGLRISSPSLDHYIVPCSIVVLTLLFSIQKHGTGSVAKLFAPVMLIWFLTLGLLGLRSIIANPEVLAAFHPKWAIAFFTEHRMVSFFALGSLVLAVTGVEALYADMGHFGKFSIRLAWFILVLPSLVLNYFGQGALLLKNPDAIKNPFFLLAPDWAMTPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIVNTSEMESGQIYIPVINWILYISVVLVIIGFKHSSNLASAYGIAVTGTMVITSVLFCTVTLKNWHWNRFFVATVLLALLFIDIPLFLANALKLFSGGWLPLTLGLLMFIIMTTWKSEHFRLLRRMHEHGNSLKAMITSLENSPPIKVPGTAVYMSRAVNVIPFALLRNLKHNKVLHERVLLLTLRTEDVPYIHNVQRVTIKQLSSTFWQVRASYGFKETPNVEKIFHLCGLEGLPFQMIETSFFMSYESLILTKRPWYLFFRGKLFIVLRRNSLRVSDQFEIPPNRVIELGTQIEI
SIO_010081: CCS41_RS00020
subclass of: SO_0000673
so part of: CCS41_RS00020
location: 4099..5967
location: region:4099-5967:1
so has part: feature:4099-5967:1:exon

WP_072549792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4099-5967:1:exon

CCS41_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00030
old locus tag: CCS41_00030
so part of: sequence
location: 6290..6472
location: region:6290-6472:1
so has part: feature:6290-6472:1:exon
subclass of: SO_0000010

position:6290:1
position: 6290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6472:1
position: 6472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6290-6472:1:exon

CCS41_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00030
old locus tag: CCS41_00030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAARSIKINIFIAHTLKFSLFPPTLKYGILTVEPPKILSIFQKFSYQSESYYFMTGTEGQ
SIO_010081: CCS41_RS00030
subclass of: SO_0000673
so part of: CCS41_RS00030
location: 6290..6472
location: region:6290-6472:1
so has part: feature:6290-6472:1:exon

WP_072549791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6290-6472:1:exon

CCS41_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00035
old locus tag: CCS41_00035
so part of: sequence
location: 6489..10541
location: region:6489-10541:1
so has part: feature:6489-10541:1:exon
subclass of: SO_0000010

position:6489:1
position: 6489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10541:1
position: 10541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6489-10541:1:exon

CCS41_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00035
old locus tag: CCS41_00035
inference: COORDINATES: protein motif:HMM:NF024321.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcdA/TcdB catalytic glycosyltransferase domain-containing protein
translation: MQHEEIIKQLKNITIDQTEYNKKGHYYEFITARNEYLYPTEPLLPSRETRLLLKMINCLTKWIVINNRRGERRYNPFLSQRLSARKDSLMENVPKILHFVCLCKITDIQRDYIDLWIQNNPDYEINIWMDENALLAQELAIRIQKKASKQALIYANINFDDFKKMLTSFLKVYFKDYSSHQELATQEKIAVDFFKTYFYEKNLNIAFDRIIKNYLQIIRKFIIDRKMIEEAIASGIQQDLTTWDPERKAKWQWHENFITPNGITLIKKEKIFQDTITRLMDFMQVAFTGYINHSNQFTEEKKETVIFEKYELEIEFSFNTRAKSIIDEFILNFDNMELFKPDEVHIIKNTFYTWKKNVFARVLLHWQDKSYKHIKMIKGGNSIDDGIIDFCKKYQLGEEEELEKIIINNENNLLTTRTELNSANPKSNIHIINKNPDYDFYRYYLVELILRGNLISASNIICLEILNEYGGVYLSTDLLPAINENLFRYLIDKTSEDPEGIQNQAIIIKFILNELVQDGKMLGRTKKPIDGMDSKKKAAIQERLEEAKQKNIPLFVGLGNIKVDPYFQFLYSADDVKAMVAKKGDVVKGNPFIIQMQANLKQTYDIIFKYDIHTSKEVRKLLILASNQDPTLIFLQKEMIPKIQTAIKNAGLKINIKAIFHYRLDILNQYEQATPEILGMPAYDFAYSQLLNKIFNKILDENGNEVSPTDPYFFQQKITFSFKAATFLTEEATQSSLRGSNRYLEPLTNRPQYGGQYIIQANDDAQSTKIALFLYNQHRDMSDWYLYDGKNDRLIYRMATEDENTEAKIQQGKNIILVGNSSAMTFLYALRIVEQLKKILQPASPHYRTRVSLLACQSATVISGDKNLFISTLYNAFEQSIPKIKVAYIISQKSLFTVDVMGRRWKGNLPEFNADVPLAAGIHWCDVTDNDTEIMASRCSTGLALSYTTQSLGSSMLMHNNVITEFNNTAFGLGSVMETLNFHPEKRVAWMNNLENLDGWIDLTVAEGLLKNLREGVVIIPAESMALAVAMGKLTHELIINDPNLDRIIALMKALKRSLEAESYVDWLESLNLSCGKKQFERLVNTLFKTPNTLEQAFKRLQSRVRANRFTFFNLNLDKEGAARHILQGMKSDSVIKAIFLGDIERQLLRNIAINDDEQFQITEVARTIKILESNFKILIEKNADQSNPPPLTLYSYSLWDPNANVSLEQQNIIFLQKNYVNSQYIQRVGQLTWSKGFHPSLINADQYSHAQAWIREHQALRQKNRVLAQGEWLELLSQLKYDPIDATYTVSYLNLRSRSITEVSSKNSMFADMTLYLDKRAQLIRKNYSLTRKKQVLARSIGHMGERGA
SIO_010081: CCS41_RS00035
subclass of: SO_0000673
so part of: CCS41_RS00035
location: 6489..10541
location: region:6489-10541:1
so has part: feature:6489-10541:1:exon

WP_119796996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6489-10541:1:exon

CCS41_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00040
old locus tag: CCS41_00040
so part of: sequence
location: 10634..14779
location: region:10634-14779:1
so has part: feature:10634-14779:1:exon
subclass of: SO_0000010

position:10634:1
position: 10634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14779:1
position: 14779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10634-14779:1:exon

CCS41_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00040
old locus tag: CCS41_00040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFHVWVSLVSDFNNVVSAASTLTEGSYRFAESIINIGWLFKRLREPINYLWNYSHHINESPIMKRIGKSTTELGLTLGFTGFLLNAYEYYEAENDRQRNLALTRMVFDGVGLTFSIGSLSVMESTWTLPPMLAVILVGYGLSKVSEKISAKIEGTINNTTKARLCGMCFNHLKKSLEQGGFTIINKALQPLEGAVIKTINLEDSRAPTVIFDETGVQIRKKTTQGKNLINNTENSKAYINLYHLSGMKKDQVIAITDLPAADQPAVNTLILPRSPRTKIDPVYAKTDFIKWRDDAEFDAMRYFAKKDPHFIFNFYKKTGFLTDSIEKFIGLDWMALTELKCRYEKTDVNIYLGREEYNLIAPGIKEDQKIEDSVYRKYLHYILHAPKEGKAIIFLVLSRGQADITLECNNMDVTWIISANHKYLRDMRLQKTLAGYKFIENVPAKQGEKDSIVLNITNLARTQATFHLYMGVATTDLHGRLIVRELNAQKVLEELRPASRSINYMNTEGIIKADLAAMIPKAKSRQVAQYTRIQNFTLKGDEESCHVYYYSYTNDFVRTENKIGTFFYNTKRQNVQLLLFSERYAWFKGDLLIPIDVNGIKYIYAYRNIIWMSEAENKELVQIYFPIGYLPDILNPDGTIKFSSPAKLKIITKLKDENRFIFLEQSYTYKRRDIDECFFLQYCIDSQYPEKGLTLIEARSLPAKIKNEIIETISVEAFSRFMQAQSHSDFYKIPEFLRKIDPWTRAGKNIKPLFNGITDTIISIKRRFIWPLKNSIHKKGYIIERIPLILSGHTDNIHYAGTTMVEIHENNFVNQPTNRRYYHFWSTTYREQKFEKLYVQQDDDTATEMLLIDFNIQNDQVLSIKETIITTTDGLLYALYDDQSLSFVGMGKNWLREHADWWVYFREYIDELTNKMEGLVPLSIGQTKTIKISSYLTLSGLQQNDEAGLLAVWYDRDSKSFIICQRDNNQQLSYLGIDRNSQKGAWLMNIREDKSKEIGYINTMTSDEVMHSFHKTVLRKMAVIPDLIKVISKRERGTVLYFTQVNAENNGYIKGTTTDGLLLQISRENRTFKIILLAVTPAFTDHYVNNLSGMKNELSELTKVYTYPEIIKIMLSNDQQGWYYPKINILFMPIKKNEATIKNIYNLNQYLGFNQQTHCAYFISNSNHQSVLIKMYQNDQQNGAIKEPEIISNQELLYERTDALLILNSGRVSTLANNEYVNIHVPALLITTPVTQDKSATFTFKVDKFNYPVIYLEHANEGSMRCIMPDAIPETVLISRKFNFLCLFVRNNLFIINHSFRATGNHSSSRLQLLFKGIIKPASNFSNHYSVIPGDVITDRDTLLFDVFITVEKLTKYYIEQADENTKDGHVIIPLPKLSS
SIO_010081: CCS41_RS00040
subclass of: SO_0000673
so part of: CCS41_RS00040
location: 10634..14779
location: region:10634-14779:1
so has part: feature:10634-14779:1:exon

WP_119796997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10634-14779:1:exon

CCS41_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00055
old locus tag: CCS41_00055
so part of: sequence
location: complement(15775..16458)
location: region:15775-16458:-1
so has part: feature:15775-16458:-1:exon
subclass of: SO_0000010

position:15775:-1
position: 15775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16458:-1
position: 16458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15775-16458:-1:exon

CCS41_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00055
old locus tag: CCS41_00055
inference: COORDINATES: protein motif:HMM:NF033545.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGYDPLKSKFPEALVKDVELYPDAYQREHAAPFKVCTKSIWQALKKWGITYKKNLRHPRADEDVRCTFQEKRDGYKEQGKSLGYLDESGCAKDMPRTHGYSPRGQRCSGLQNGQAKRRTNVIGALLGTVLMAIVLFSSPVNSDVFYAWVTQLLQPSLPPHCVIVMDNASFHKRQDIQLAIINAGHLIQYLPPYPPDLNPIEHKWAQAKSKRRDLNCDINTLFSEYMM
SIO_010081: CCS41_RS00055
subclass of: SO_0000673
so part of: CCS41_RS00055
location: complement(15775..16458)
location: region:15775-16458:-1
so has part: feature:15775-16458:-1:exon

WP_072549787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15775-16458:-1:exon

CCS41_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00060
old locus tag: CCS41_00060
pseudo: true
so part of: sequence
location: <16429..16740
location: region:16429-16740:1
so has part: feature:16429-16740:1:exon
subclass of: SO_0000010

position:16429:1
position: 16429
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:16740:1
position: 16740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16429-16740:1:exon

CCS41_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00060
old locus tag: CCS41_00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611212.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1 family transposase
SIO_010081: CCS41_RS00060
subclass of: SO_0000673
so part of: CCS41_RS00060
location: <16429..16740
location: region:16429-16740:1
so has part: feature:16429-16740:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16429-16740:1:exon

CCS41_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00065
old locus tag: CCS41_00065
so part of: sequence
location: 16883..17209
location: region:16883-17209:1
so has part: feature:16883-17209:1:exon
subclass of: SO_0000010

position:16883:1
position: 16883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17209:1
position: 17209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16883-17209:1:exon

CCS41_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00065
old locus tag: CCS41_00065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQIINIEEGIRHHEWIQTLFGTIALGFDAASLFFNGLKNGMNEAGPHFATSQKRDKKIITAVMQVAGKTTDLPITSWIDNMMHLPLSLILIIWHCRVQGCQGAKNIYP
SIO_010081: CCS41_RS00065
subclass of: SO_0000673
so part of: CCS41_RS00065
location: 16883..17209
location: region:16883-17209:1
so has part: feature:16883-17209:1:exon

WP_072549785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16883-17209:1:exon

CCS41_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00070
old locus tag: CCS41_00070
so part of: sequence
location: 17259..18281
location: region:17259-18281:1
so has part: feature:17259-18281:1:exon
subclass of: SO_0000010

position:17259:1
position: 17259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18281:1
position: 18281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17259-18281:1:exon

CCS41_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00070
old locus tag: CCS41_00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MKIELTADQKITLEAQHRQSHDRRVCDRIRCVLLSADGWTPPMIAHSQLINETTVRRHLTDYHKLNKLKPENGGSDGYLNAEQTTSLVEHLTQPLYHHNHQIVAYIAGRWNITFTVSGPYKGLKQHGFSYKKPKGVPHKFAVEKQQQFIKTYSELKDAAGNDPILFIDAVHPTQAAKISYGWIRKGQDKTIETTGSRTRLNIMGALNIQNVANPIIRDDETINSENVVHFLSAIRAHYPITTTAHVILEGAGYHRSQLVQDAALTLNIQLHYLPPYSPNLNPIERLWKVMNEQTRNNRYYPSKQSFKNDILNFFEVKLPQMASSLVSRLNDNFQALNPAS
SIO_010081: CCS41_RS00070
subclass of: SO_0000673
so part of: CCS41_RS00070
location: 17259..18281
location: region:17259-18281:1
so has part: feature:17259-18281:1:exon

WP_119796998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17259-18281:1:exon

CCS41_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00075
old locus tag: CCS41_00075
so part of: sequence
location: 18345..18605
location: region:18345-18605:1
so has part: feature:18345-18605:1:exon
subclass of: SO_0000010

position:18345:1
position: 18345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18605:1
position: 18605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18345-18605:1:exon

CCS41_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00075
old locus tag: CCS41_00075
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVKNSGGGYEIDWHTTEPNYARMITHKAGEKYYTKVNLKGGKGELSIEDGMQSFYLDSYFPNLEHIAERFYYNYSIKMNRVVYLY
SIO_010081: CCS41_RS00075
subclass of: SO_0000673
so part of: CCS41_RS00075
location: 18345..18605
location: region:18345-18605:1
so has part: feature:18345-18605:1:exon

WP_072550756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18345-18605:1:exon

CCS41_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00080
old locus tag: CCS41_00080
so part of: sequence
location: 18674..19078
location: region:18674-19078:1
so has part: feature:18674-19078:1:exon
subclass of: SO_0000010

position:18674:1
position: 18674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19078:1
position: 19078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18674-19078:1:exon

CCS41_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00080
old locus tag: CCS41_00080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRKVTDTTLSPQFDELFNFLFTLILETGKKTVILIHSYHNIYRRSPTFRRLFNYAVPSLTEKHKIKIASTIQPYSDFVGKVIKFPDVCTMLLIPQYLSLPGQPENFSAIRIYLHEMLHILLNLRDPTLGAGSI
SIO_010081: CCS41_RS00080
subclass of: SO_0000673
so part of: CCS41_RS00080
location: 18674..19078
location: region:18674-19078:1
so has part: feature:18674-19078:1:exon

WP_072550757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18674-19078:1:exon

CCS41_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00085
old locus tag: CCS41_00085
so part of: sequence
location: 19334..22021
location: region:19334-22021:1
so has part: feature:19334-22021:1:exon
subclass of: SO_0000010

position:19334:1
position: 19334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22021:1
position: 22021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19334-22021:1:exon

CCS41_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00085
old locus tag: CCS41_00085
inference: COORDINATES: protein motif:HMM:NF024321.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcdA/TcdB catalytic glycosyltransferase domain-containing protein
translation: MERLDIVEKLKNINKNENYYKKNFLYKTFFDSKEEYVKMIPSTDPKKEMELLLRMMRCIKDGVIVVDKDEQLLNIELTLNLLLSRKKTMMETVSETLHFIILGKIENIQREYINLWIQQHSHYKIKTWTDNNTYLSREIFVRIQKKASQETFDDTNTDNNDFYTFFKSNVIGLQNEIYQYMQENTHISFDMAAKNFLIRHTLGDPEELLTIWNDNHKSFTDALAKLKKDNPDIVIAIKNIDELDNIQEERKLYIKELALRGNFDAATDIFRLLVLRQYGGVCINPDLLPAVNKELFADIIERTLSDPEGIKSQAIILRVILDELMEQDMMPTRETLLESYQLASIDPKIERVIKQLVALAQKSGTPLFMPLEELKVDPYFQFSYTLYGDGVVLAKAKAEEKSHFIDQILENLQCIHKIIDNPEHNINGLSEILLLPEKVNPALEQQLANQNVIVDIEALIGYRHTAMARYDRVTPGLAGIRAYDNLYFYQLLQINAIPVVENKYKFQQFTFSSFISVSWITEQSEQSRLLGKMRYHEVFTCCPQYYAQCIIQLSHNDLLCEETAKFLYHTNTELNAWYKYNKRTQELIKVKEAPDLHLKKETRILLVGDGSPINFSVQDVTQLLVQHSIKWGNENVEREQLIFIGCGLMQSAIDLLRNRDEWGRIKAECSTADRNYELSETLDSRNVFAIDFIERLYLFLESNHIFINHILVQENLFTIDAMGQRWLGKPKAVRQGFRQKINWVVASNCDKKIKFTLRNTVVKREYQPIEQDLAVRIRVVTEFDKNQFSLGDILQSRLVNNEILPERLPNPEKLDGWIDANMATGLKEAILRGAVLINADSMALIVGMYNSTNEILIVDANDVGVTMLIKVLQQVLEKNSYQSWFDGLDCTCGKL
SIO_010081: CCS41_RS00085
subclass of: SO_0000673
so part of: CCS41_RS00085
location: 19334..22021
location: region:19334-22021:1
so has part: feature:19334-22021:1:exon

WP_072550758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19334-22021:1:exon

CCS41_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00090
old locus tag: CCS41_00090
so part of: sequence
location: 22031..25036
location: region:22031-25036:1
so has part: feature:22031-25036:1:exon
subclass of: SO_0000010

position:22031:1
position: 22031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25036:1
position: 25036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22031-25036:1:exon

CCS41_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00090
old locus tag: CCS41_00090
inference: COORDINATES: protein motif:HMM:NF024322.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcdA/TcdB pore-forming domain-containing protein
translation: MIPQIVGDVEAGFQRLKKRIIRNLFSFYRLSLSEYNSAQTIFLGKYSKEKIKAIYLGNIDRFLLADAENKIKVKPSTITIEQLNTTFNILSGYYRTIPIYYYSLLSFTHGSNHLQQSSSSQGTELIIENHLDINYMQRIEQLNFSGSMPHSTFMVVSSYNNEQEYRRVMAAADHSINVDEWLPLLTSLKYDSNSGKYKIRLLNMNDFTLVKELESTDKIFEELRQYLWRQLQIDSHYPKFFSGQSQIKLVGKAGGMGSVFDSVLSLYDFLQYGVNQVKGNSILAKTIQAHIYLSLLADFHNVINTKGTITEFYLHRVCKHLKTGSIRQALNAVGKFNTRLAKGGVLLGFISLGLNTLQLIQERNEMQRSIIVVKIALDLVSISLGIVGLIFSSPFTVVAMFVVGIALAVASNCVSDEVMNMLENIEKAKAIGRYFNSMKKGWDQGGILIIKDTLIPCQGTVISEINFTDPQQTVVTFDRYGQQMRKMHDTYTQMEPEAYINLREMNGDSVRKHSIALQNGTQSTTLILPITPRAQIEPIYDFVPFIRLRGDAEFDTVRWFEKQLDAGFVFSGIGKYENIYGQQIPIQHDAYYRAMTGLKFDYKYTSVEIFLGNAKYNLIAPGVSETQLLTNYTYKKYLNYTFYAPITGKADVVLILNKAQADMTINCKNSAVQWIIDARHLSGITTSFDVIHDEPQDNRFMRLDYNIFIRLHFHRFVKSANSEYISNGIKVTQSIEDRITLTIPHFSTTTLTVQLPEGVFTAQLNWESPRLIPLFIDASSIPNINQRGDEVNAVKRYITQHLKNVGQTIKYLRINKFSPDPNEQSEFCFYLCSHETFLYTANHQDTLFRKTRPENVQLLFLSKEYAWYQGDLIIPMVPMPKYARILFKYEKIIWVSEIRTSNLLQVYLPLAHLPSMMENGRQSYTSLSTLNNVNVLAQAITFEQEYHYGSEKIRLKYMIDTLDPYQALALTELYGLPAEVKSQLIEKRHLTGLAAFIKNRS
SIO_010081: CCS41_RS00090
subclass of: SO_0000673
so part of: CCS41_RS00090
location: 22031..25036
location: region:22031-25036:1
so has part: feature:22031-25036:1:exon

WP_072550759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22031-25036:1:exon

CCS41_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00095
old locus tag: CCS41_00095
so part of: sequence
location: 25073..26887
location: region:25073-26887:1
so has part: feature:25073-26887:1:exon
subclass of: SO_0000010

position:25073:1
position: 25073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26887:1
position: 26887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25073-26887:1:exon

CCS41_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00095
old locus tag: CCS41_00095
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGKNIKGLINFKTDTTILIGDRLIWPLKNSIDVKGHISARMYTNILKDSDFLISPAGIVKGMKAGDDNYFFWSVTPRQYKQNGNNWLYRLYVQEEGDDAKVMNLREFGLNNHDVVNIRNALITTEKGFIYRLSDDKKLTLFAVENAFIIGNPDWALSLTTYIGQLRNKLADASLLEPGQTKAIEIAIHVSIWGLLYGDENPPLPLSAWYDINSEQFIICKMDLGQNMINLGMSSDNQGAWILNNSKLGYVAKINTFLLGNIFTGGVLHDENKIPKISTLVLNEALGTDFVNVMLIQGNIEGLTNNGIHLNIGRTDDDIFTVTLIGVTTAFSQDHYSDTTYLNVNSLTNAIEHLCHQCICAEIIQIGLKNNLQAWYQPMKKILFMSSTLNSLENYLGFNSNKEEAYFISNKQDLIKVNRGGEVGRINNLGALYQRRNEVLILNSGRLTTLAPDEHIDADVSALLITTSLDQIEDMAFTFEIELFNYPVIYLSHVGNGSLHCSLPIDVMPENINISRNYDALFVFIENKLLVIDDVFERSQSKIKGDILHHELKLIFNYKSHILLHDHAIKQIISIQEMKDYYIHTVGNETTDGHVIIPLPNYKV
SIO_010081: CCS41_RS00095
subclass of: SO_0000673
so part of: CCS41_RS00095
location: 25073..26887
location: region:25073-26887:1
so has part: feature:25073-26887:1:exon

WP_072550760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25073-26887:1:exon

CCS41_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00100
old locus tag: CCS41_00100
so part of: sequence
location: 27271..28836
location: region:27271-28836:1
so has part: feature:27271-28836:1:exon
subclass of: SO_0000010

position:27271:1
position: 27271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28836:1
position: 28836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27271-28836:1:exon

CCS41_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00100
old locus tag: CCS41_00100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTSSFPNSFQNEKYVSTHYVRDQSSGMKVNDFLTGLLNSTNKSSIIFPFSCLQEEVPKRANDGSFIFGEFGEIRVHYLVDKQGNKNIQVKEYNGDKVISTITFNYIDGNFIIHNEIKNKYHENGQVHRREESTFDTKGLLISSSKKYYNAMGRLIYRVESECNSDGKEVSQSNSEFDYDVDGRLLMESVINYDAHGKPDRYIKISSHYDTDNLLRNKNTSEYDPQGELLGKSSTFFSYDADGKLCQESVSNYNANGELVSESLTHTGSTLDAASNEASVAQMYDLSVSSHESTIARHYQYTADPLSHDKKGIRIFVNDANGSKAENNSSDLHDKTVVVVESNAENQTVSSSKFFFDMNGKVFKGIHNKYEYDTKGQVTSNSQVYSRYTADGEFIIRKVNEFGYQTVANGGTQGTLLYSIKMVRSVAGKMFYRTDYTSNCVPQQSVEETYDVNGKWVSCCRRKYNLNQEKSLISDDFKQQEASVIDSLITRVHNWTSDEKIAPFDPKLSANRVLNTLLVAC
SIO_010081: CCS41_RS00100
subclass of: SO_0000673
so part of: CCS41_RS00100
location: 27271..28836
location: region:27271-28836:1
so has part: feature:27271-28836:1:exon

WP_119963733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27271-28836:1:exon

CCS41_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00105
old locus tag: CCS41_00105
so part of: sequence
location: 29468..29914
location: region:29468-29914:1
so has part: feature:29468-29914:1:exon
subclass of: SO_0000010

position:29468:1
position: 29468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29914:1
position: 29914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29468-29914:1:exon

CCS41_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00105
old locus tag: CCS41_00105
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000062993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit A
translation: MPITTGVIAHHWAFAVFCIGAMGLCSLMLLSAFFLGGKARARAKNIPYESGIDSVGSARMRLSAKFYLVAMFFVIFDVEALYLYAWSISIRESGWIGFIEASIFIFVLLAGLIYLVRIGALDWTPGQSHRRVKPGTITTISSRSLQKL
SIO_010081: CCS41_RS00105
subclass of: SO_0000673
so part of: CCS41_RS00105
location: 29468..29914
location: region:29468-29914:1
so has part: feature:29468-29914:1:exon

WP_072550762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29468-29914:1:exon

CCS41_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00110
old locus tag: CCS41_00110
so part of: sequence
location: 29927..30604
location: region:29927-30604:1
so has part: feature:29927-30604:1:exon
subclass of: SO_0000010

position:29927:1
position: 29927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30604:1
position: 30604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29927-30604:1:exon

CCS41_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00110
old locus tag: CCS41_00110
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005228044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit B
translation: MDYTLTRVEPNGENDRYPLQSQETISGDPLEQHVHRSVYMGKLENALHGMVNWGRKNSLWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADFMVVAGTCFTKMAPVIQRLYEQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAYMQALLLLQESIGKERRPLSWAVGDQGVYRANMQSERERKRGERIAVTNLRTPDKI
SIO_010081: CCS41_RS00110
subclass of: SO_0000673
so part of: CCS41_RS00110
location: 29927..30604
location: region:29927-30604:1
so has part: feature:29927-30604:1:exon

WP_072550763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29927-30604:1:exon

CCS41_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nuoC
locus tag: CCS41_RS00115
old locus tag: CCS41_00115
pseudo: true
so part of: sequence
location: 30617..32415
location: region:30617-32415:1
so has part: feature:30617-32415:1:exon
subclass of: SO_0000010

position:30617:1
position: 30617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32415:1
position: 32415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30617-32415:1:exon

CCS41_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nuoC
locus tag: CCS41_RS00115
old locus tag: CCS41_00115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005159214.1
GO component: GO:0030964 - NADH dehydrogenase complex [Evidence IEA]
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit C/D
SIO_010081: CCS41_RS00115
subclass of: SO_0000673
so part of: CCS41_RS00115
location: 30617..32415
location: region:30617-32415:1
so has part: feature:30617-32415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30617-32415:1:exon

CCS41_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nuoE
locus tag: CCS41_RS00120
old locus tag: CCS41_00120
so part of: sequence
location: 32418..32957
location: region:32418-32957:1
so has part: feature:32418-32957:1:exon
subclass of: SO_0000010

position:32418:1
position: 32418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32957:1
position: 32957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32418-32957:1:exon

CCS41_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nuoE
locus tag: CCS41_RS00120
old locus tag: CCS41_00120
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004717850.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoE
translation: MNDQKERQHHKNPLDVVSLATKPAFVLSAEEYAAIEQEKHHYEDARAASIEALKIVQKKRGWVPDGAIYAIADVLAIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCYITGYQGLQAAIEKKLSIKPGQTTTDGRFTLLPTCCLGNCDKGPTMMIDEDTHSYLKPEDIEQLLERYP
SIO_010081: CCS41_RS00120
subclass of: SO_0000673
so part of: CCS41_RS00120
location: 32418..32957
location: region:32418-32957:1
so has part: feature:32418-32957:1:exon

WP_072550765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32418-32957:1:exon

CCS41_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nuoF
locus tag: CCS41_RS00125
old locus tag: CCS41_00125
so part of: sequence
location: 32954..34339
location: region:32954-34339:1
so has part: feature:32954-34339:1:exon
subclass of: SO_0000010

position:32954:1
position: 32954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34339:1
position: 34339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32954-34339:1:exon

CCS41_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nuoF
locus tag: CCS41_RS00125
old locus tag: CCS41_00125
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016537434.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoF
translation: MNRHVTAATHPLTWRLRDDKRPLWLDEYRNKNGYQGAKIALTGMAPSDVVDLVKNAGLKGRGGAGFSTGLKWSLMPKDESINIRYLLCNADEMEPGTYKDRLLMEQLPHLLIEGMLISAFALKAYRGYIFLRGEYIDAAVCLRQAISEARDAGLLGKNILGSGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPASSGVWGKPTCVNNVETLCNVPAILEHGVDWYQGITAGKSNDAGTKLMGFSGRVKNPGVWELPFGISAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTAEHLDLPMDFEHIGKAGSRLGTALAMAVDHQISMVSLTRNLEEFFARESCGWCTPCRDGLPWSVKILQALERGEGQPGDIETLEQLCRLLGPGKTFCAHAPGAVEPLQSAIKYFRAEFAAGIAKKDYSRPDVINRGDTDFGNTAAIEGIQANNLLNVRW
SIO_010081: CCS41_RS00125
subclass of: SO_0000673
so part of: CCS41_RS00125
location: 32954..34339
location: region:32954-34339:1
so has part: feature:32954-34339:1:exon

WP_072550766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32954-34339:1:exon

CCS41_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nuoG
locus tag: CCS41_RS00130
old locus tag: CCS41_00130
pseudo: true
so part of: sequence
location: 34514..37247
location: region:34514-37247:1
so has part: feature:34514-37247:1:exon
subclass of: SO_0000010

position:34514:1
position: 34514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37247:1
position: 37247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34514-37247:1:exon

CCS41_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nuoG
locus tag: CCS41_RS00130
old locus tag: CCS41_00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011815941.1
GO function: GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
GO process: GO:0006120 - mitochondrial electron transport, NADH to ubiquinone [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoG
SIO_010081: CCS41_RS00130
subclass of: SO_0000673
so part of: CCS41_RS00130
location: 34514..37247
location: region:34514-37247:1
so has part: feature:34514-37247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34514-37247:1:exon

CCS41_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nuoH
locus tag: CCS41_RS00135
old locus tag: CCS41_00135
so part of: sequence
location: 37247..38224
location: region:37247-38224:1
so has part: feature:37247-38224:1:exon
subclass of: SO_0000010

position:38224:1
position: 38224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37247-38224:1:exon

CCS41_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nuoH
locus tag: CCS41_RS00135
old locus tag: CCS41_00135
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoH
translation: MNWFTPDLSTILISILKALVILLVVVICGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWVPHFSDRIIFTLAPMIAFTSLLLAFAIVPISPSWVVADLNIGILFFLMMAGLAVYAVLFAGWASNNKYSLLGAMRACAQTLSYEVFIGLSLMGVVAQTGSFNMQDIVNHQQHVWNIIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIAIVTVSALIVTLFFGGWQGPFLPPFIWFALKTAFFMVMFILIRAALPRPRYDQVMSFGWKVCLPLTLLNLLATAAVILYSPQ
SIO_010081: CCS41_RS00135
subclass of: SO_0000673
so part of: CCS41_RS00135
location: 37247..38224
location: region:37247-38224:1
so has part: feature:37247-38224:1:exon

WP_072550781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37247-38224:1:exon

CCS41_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nuoI
locus tag: CCS41_RS00140
old locus tag: CCS41_00140
so part of: sequence
location: 38239..38781
location: region:38239-38781:1
so has part: feature:38239-38781:1:exon
subclass of: SO_0000010

position:38239:1
position: 38239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38781:1
position: 38781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38239-38781:1:exon

CCS41_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nuoI
locus tag: CCS41_RS00140
old locus tag: CCS41_00140
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoI
translation: MTLKELVVGFGTQVRSLWMMALHVFHKRETQMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVVCPVACISLQKAEKQDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMSEFKRQDLVYEKEDLLISGPGKYPQYNFYRMAGMSIEGKQKGEAENEAKPIDVKSLMP
SIO_010081: CCS41_RS00140
subclass of: SO_0000673
so part of: CCS41_RS00140
location: 38239..38781
location: region:38239-38781:1
so has part: feature:38239-38781:1:exon

WP_072550768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38239-38781:1:exon

CCS41_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nuoJ
locus tag: CCS41_RS00145
old locus tag: CCS41_00145
so part of: sequence
location: 38795..39292
location: region:38795-39292:1
so has part: feature:38795-39292:1:exon
subclass of: SO_0000010

position:38795:1
position: 38795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39292:1
position: 39292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38795-39292:1:exon

CCS41_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nuoJ
locus tag: CCS41_RS00145
old locus tag: CCS41_00145
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008459782.1
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit J
translation: MEFVFYSAAVVAVLATLRVISHSNPVHALLYLIVSLLAIAAVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGDTVQQQEGAWLKPSLWIGPGLLSLTLLIILIISFRSVSGCEIGGVVVDAKQVGISLFAPYVLAVELASMLLLAGLVVAFHLGREEASQ
SIO_010081: CCS41_RS00145
subclass of: SO_0000673
so part of: CCS41_RS00145
location: 38795..39292
location: region:38795-39292:1
so has part: feature:38795-39292:1:exon

WP_072550769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38795-39292:1:exon

CCS41_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nuoK
locus tag: CCS41_RS00150
old locus tag: CCS41_00150
so part of: sequence
location: 39289..39591
location: region:39289-39591:1
so has part: feature:39289-39591:1:exon
subclass of: SO_0000010

position:39289:1
position: 39289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39591:1
position: 39591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39289-39591:1:exon

CCS41_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nuoK
locus tag: CCS41_RS00150
old locus tag: CCS41_00150
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1
GO function: GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO process: GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoK
translation: MIPLQHGLILAAVLFVLGLTGLLIRRNLLFMLISLEVMINAAALAFVVAGSCWHQPDGQVMYILAISLAAAEASIGLALLLQLYRRRHTLNIDTLSEMRG
SIO_010081: CCS41_RS00150
subclass of: SO_0000673
so part of: CCS41_RS00150
location: 39289..39591
location: region:39289-39591:1
so has part: feature:39289-39591:1:exon

WP_072550770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39289-39591:1:exon

CCS41_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nuoL
locus tag: CCS41_RS00155
old locus tag: CCS41_00155
so part of: sequence
location: 39588..41444
location: region:39588-41444:1
so has part: feature:39588-41444:1:exon
subclass of: SO_0000010

position:39588:1
position: 39588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41444:1
position: 41444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39588-41444:1:exon

CCS41_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nuoL
locus tag: CCS41_RS00155
old locus tag: CCS41_00155
EC number: 7.1.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210270.1
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO process: GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit L
translation: MNLLFLTILLPLLGFLLLAFSAGRYPENTSAVIGVGSMGLTALVTLYVAIDFLSQQVTGVQVVSQTLWHWMVVDSFSIPLTLRLDGLSLTLLSVVTGVGFFIHLYASWYMRAEEGYSRFFAYTNLFIASMVVLVLADNLLLLYLGWEGVGLCSYLLIGFYYSNPANGAAAMKAFIVTRIGDVFLAFALFILYQELGTLNIHELMVLAPQKLATGSNAITWVTLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMAPEVLHLVGIIGAITLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWHAAIFHLMIHAFFKALLFLASGSVIIACHHQQNIFKMGGLRKTIPLVYICFLVGGAALAALPIVTAGFYSKDEILWGALASGHINLLIAGLIGAFLTALYTFRMIFIVFHGEAAHDASKHVQPVQGISHSLPLLVLLVLSTFIGAFITPPLAGVLPENHVAESGKMALEVFSGVLVISGILLASLLYLGKRQRVSSIARSTSGKFLTLCWFHAWGFDWLYDKLFVRPYLWIAKILQRDPLDSLMNLSASFARLANRALSVSENGKMRWYLASMGLGAVAVLLILLFI
SIO_010081: CCS41_RS00155
subclass of: SO_0000673
so part of: CCS41_RS00155
location: 39588..41444
location: region:39588-41444:1
so has part: feature:39588-41444:1:exon

WP_072550771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39588-41444:1:exon

CCS41_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nuoM
locus tag: CCS41_RS00160
old locus tag: CCS41_00160
pseudo: true
so part of: sequence
location: 41507..43068
location: region:41507-43068:1
so has part: feature:41507-43068:1:exon
subclass of: SO_0000010

position:41507:1
position: 41507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43068:1
position: 43068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41507-43068:1:exon

CCS41_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nuoM
locus tag: CCS41_RS00160
old locus tag: CCS41_00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013318698.1
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO process: GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit M
SIO_010081: CCS41_RS00160
subclass of: SO_0000673
so part of: CCS41_RS00160
location: 41507..43068
location: region:41507-43068:1
so has part: feature:41507-43068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41507-43068:1:exon

CCS41_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nuoN
locus tag: CCS41_RS00165
old locus tag: CCS41_00165
so part of: sequence
location: 43075..44529
location: region:43075-44529:1
so has part: feature:43075-44529:1:exon
subclass of: SO_0000010

position:43075:1
position: 43075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44529:1
position: 44529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43075-44529:1:exon

CCS41_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nuoN
locus tag: CCS41_RS00165
old locus tag: CCS41_00165
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012146011.1
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoN
translation: MTITLQQLIAMLPLLIVGLTVVVVMLSIAWRRDHFVNATLTVIGLNVALFSLYFVWQIVPLDVTLLLRIDGYSMFYTGLVLLAGLASATFAYPWLAGYPDNREEFYLLLLIATLGGILLVSANHLATLFLGIELISLPLFGLIGYAYRQNRSLEASIKYMLLSAAASSFLLFGMALLYAESGSLSFSELGSSLNDSLIHRPLVMAGLSMMLIGLCFKLSLVPFQLWTPDVYQGTPAPVLAFLATASKIAIFVVVMRLLLYAPAADDEAMDVLLTIMAIGSILFGNLMAMTQSNIKRLLGYSSIAHLGYLLITLMVVQPQPSSGIIGIYMTGYLFSNLGAFGVISLMSSPYKGADAESLFCYRGLFWHKPILAAVMTVMMLSLAGIPLTLGFIGKFFIIILGVSAHLWWLTGAVVLGSAIGLYYYLRVTVSLFLSPPQELQRDTVHNWAFTAAGIVVLICAIAVLLLGVYPQPLISLMQFAQPVF
SIO_010081: CCS41_RS00165
subclass of: SO_0000673
so part of: CCS41_RS00165
location: 43075..44529
location: region:43075-44529:1
so has part: feature:43075-44529:1:exon

WP_072550773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43075-44529:1:exon

CCS41_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: dnaQ
locus tag: CCS41_RS00170
old locus tag: CCS41_00170
so part of: sequence
location: complement(44624..45385)
location: region:44624-45385:-1
so has part: feature:44624-45385:-1:exon
subclass of: SO_0000010

position:44624:-1
position: 44624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45385:-1
position: 45385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44624-45385:-1:exon

CCS41_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: dnaQ
locus tag: CCS41_RS00170
old locus tag: CCS41_00170
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708096.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit epsilon
translation: MSTAITRQIVLDTETTGLNKLGVHYKGHRIIEIGAVEMINRRLTGNNFHVYLKPNRQVDPEAYAIHGISDEFLADKPTFADTAKEFLDFIRGADLVIHNATFDIGFMDYEFSMLKQSIPKVETFCTITDSLVMARRLFPGKRNNLDALCDRYHIDNTKRTLHGALLDAEILADVYLAMTGGQTSLSFSLESDQQPQSQNTTEDIKPVIRPTSALKIIHASADELAEHETQLDAVAKKGKCLWRDPSFDKDAVK
SIO_010081: CCS41_RS00170
subclass of: SO_0000673
so part of: CCS41_RS00170
location: complement(44624..45385)
location: region:44624-45385:-1
so has part: feature:44624-45385:-1:exon

WP_072550774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44624-45385:-1:exon

CCS41_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00175
old locus tag: CCS41_00175
so part of: sequence
location: complement(45599..46525)
location: region:45599-46525:-1
so has part: feature:45599-46525:-1:exon
subclass of: SO_0000010

position:45599:-1
position: 45599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46525:-1
position: 46525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45599-46525:-1:exon

CCS41_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00175
old locus tag: CCS41_00175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTGVQNFGQVLNIWKTRIGKELSPQEKKIAQAQATNTSFSPTQNITRVNPKALKKFQEKLDARLESFTSEPTKTDKYGRPVLPRHEMVIKSSISTAAAAKGRGLIANGVVTRIKEYLNTLTEQGRTPHAKSVAEAKQLAELANKHAKSADEHGVRAQNSSANIEIEKKRLVNEEAADKTMVDKYLTTKDNIQKYKNIITKSASNKKDAEKRLKTDSCLKALEGNMQEHRSKIIESASNTGNVEKILGKIGEHLEDLKNNIQKAEKERESATIFSEKVERIGEEVEKIRKETVSKRTFRSSPRYSRGE
SIO_010081: CCS41_RS00175
subclass of: SO_0000673
so part of: CCS41_RS00175
location: complement(45599..46525)
location: region:45599-46525:-1
so has part: feature:45599-46525:-1:exon

WP_072550775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45599-46525:-1:exon

CCS41_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rnhA
locus tag: CCS41_RS00180
old locus tag: CCS41_00180
so part of: sequence
location: 46814..47278
location: region:46814-47278:1
so has part: feature:46814-47278:1:exon
subclass of: SO_0000010

position:46814:1
position: 46814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47278:1
position: 47278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46814-47278:1:exon

CCS41_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rnhA
locus tag: CCS41_RS00180
old locus tag: CCS41_00180
EC number: 3.1.26.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002387923.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HI
translation: MRKQVEIFTDGSCLGNPGRGGYGAILRYKQYEKTFSGGYHLTTNNRMELMAAIIALEALTSSCEVRLSTDSQYVRQGISQWIHNWKKRGWRTTNRTAVKNVDLWQRLDSAIQHHQVTWIWVKGHAGHLENERCDELARIVANTPTEDDIGYRPE
SIO_010081: CCS41_RS00180
subclass of: SO_0000673
so part of: CCS41_RS00180
location: 46814..47278
location: region:46814-47278:1
so has part: feature:46814-47278:1:exon

WP_072550776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46814-47278:1:exon

CCS41_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00185
old locus tag: CCS41_00185
so part of: sequence
location: complement(47287..48006)
location: region:47287-48006:-1
so has part: feature:47287-48006:-1:exon
subclass of: SO_0000010

position:47287:-1
position: 47287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48006:-1
position: 48006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47287-48006:-1:exon

CCS41_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00185
old locus tag: CCS41_00185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004390358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MKPAQLCLKIHAPESWSELPWGEYYRSAIEQKMQPWWPKFFGFHLLKIGNLSTEITSDQCTITHQVSIAEQGRAVQILASPYQLPFAEKSVDAILLAHTLNYCIDPHSILRELDRVLVDDGWLVISHFNPLSLLGMGKLLPILRQRQPYTSRMFTQMRVLDWLGLLNYQVMHQSRFHVLPWHKQGGGFVNTHLPALGCVSLIIARKRRLPLTFNPMKFATAKPWFNRALGATKSYRNPP
SIO_010081: CCS41_RS00185
subclass of: SO_0000673
so part of: CCS41_RS00185
location: complement(47287..48006)
location: region:47287-48006:-1
so has part: feature:47287-48006:-1:exon

WP_072550777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47287-48006:-1:exon

CCS41_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: gloB
locus tag: CCS41_RS00190
old locus tag: CCS41_00190
so part of: sequence
location: 48045..48800
location: region:48045-48800:1
so has part: feature:48045-48800:1:exon
subclass of: SO_0000010

position:48045:1
position: 48045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48800:1
position: 48800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48045-48800:1:exon

CCS41_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: gloB
locus tag: CCS41_RS00190
old locus tag: CCS41_00190
EC number: 3.1.2.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004711639.1
GO function: GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO process: GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxyacylglutathione hydrolase
translation: MDLISVPALQDNYIWLLADTQAHCVIIDPGEAAPVFTALTEQQLTADAILLTHHHYDHLDGVVELLRRFPGLPVYGPQETADKGATVLVKEGDDLTIGSQNFSIIAVPGHTLGHIAYYNAPYLFCGDTLFSAGCGRLFEGTCDQMYASIQKIMQLPDDTLICSAHEYTLSNLAFARSILPQDRKIETYQQHIEQLRAKNQPSLPTTLQLEREINVFLRCSDIELQKKVGITPYSTSFSSIFSALRVMKDRF
SIO_010081: CCS41_RS00190
subclass of: SO_0000673
so part of: CCS41_RS00190
location: 48045..48800
location: region:48045-48800:1
so has part: feature:48045-48800:1:exon

WP_072550778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48045-48800:1:exon

CCS41_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: mltD
locus tag: CCS41_RS00195
old locus tag: CCS41_00195
so part of: sequence
location: 48881..50134
location: region:48881-50134:1
so has part: feature:48881-50134:1:exon
subclass of: SO_0000010

position:48881:1
position: 48881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50134:1
position: 50134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48881-50134:1:exon

CCS41_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: mltD
locus tag: CCS41_RS00195
old locus tag: CCS41_00195
EC number: 4.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002217338.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008933 - lytic transglycosylase activity [Evidence IEA]
GO process: GO:0000270 - peptidoglycan metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein transglycosylase D
translation: MKTKAIFLASVLLVGCQTSKLGKQVPVQHAQSLSSANIENEAGKYTDTSRESSVRSANNSFSQKNLWGFISNELKIKVQDNALILEQRQKYLKSKSDLHDVMVRAEPYLHLIVSQIKKRNIPMELVLIPIVESAFDPRATSSANAAGLWQIVPSTGLYYGLKQNQGYDGRRDVLASTNAALDLMQNLNDTFNGDWLLTVAAYNSGEGRVRQAIKANKAQGKRLNFWALSLPRQTSVYVPKMLALSDIIKNHKEYGFNLPETSEKNGLARVDVGQQMKLTRAAEMSGLSLARLKSYNAGYKRNVTASPYYIMLPKSHAVQFRNSLAEARFTGVQSTQLAKNSTSSLKVRKRLQLANSTGGNSVTYQVRRGDSVASIAKRHGINAKDVMRWNSVVSQSNSLRPGLELTLFVNDKANPDS
SIO_010081: CCS41_RS00195
subclass of: SO_0000673
so part of: CCS41_RS00195
location: 48881..50134
location: region:48881-50134:1
so has part: feature:48881-50134:1:exon

WP_072550779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48881-50134:1:exon

CCS41_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00200
old locus tag: CCS41_00200
so part of: sequence
location: 50250..51032
location: region:50250-51032:1
so has part: feature:50250-51032:1:exon
subclass of: SO_0000010

position:50250:1
position: 50250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51032:1
position: 51032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50250-51032:1:exon

CCS41_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00200
old locus tag: CCS41_00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704340.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease/exonuclease/phosphatase family protein
translation: MPKRTYAMRYVAGRPVEQIFPGSARPLGRELPLGEPLRTSKFLRVMVWNIFKQQRTNWLSILKKFGKDSQLILLQEARTTPEMVRFATSNYLAADQVPAFKFPHHPSGVMTLAAAHPVYCYPLREREPLLRLSKSALITVYPIHDKRLLMVVNIHAVNFSLGVDVYSKQLGPIGEQIALHPGPLILAGDFNAWSRQRVNALRLFAHKMELQEVEFLIDNRSRVFGRPLDFVFFRDLYVAEALVLATRASDHNPLRVDFLL
SIO_010081: CCS41_RS00200
subclass of: SO_0000673
so part of: CCS41_RS00200
location: 50250..51032
location: region:50250-51032:1
so has part: feature:50250-51032:1:exon

WP_072550780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50250-51032:1:exon

CCS41_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00205
old locus tag: CCS41_00205
pseudo: true
so part of: sequence
location: 51299..52123
location: region:51299-52123:1
so has part: feature:51299-52123:1:exon
subclass of: SO_0000010

position:51299:1
position: 51299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52123:1
position: 52123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51299-52123:1:exon

CCS41_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00205
old locus tag: CCS41_00205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041621276.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: CCS41_RS00205
subclass of: SO_0000673
so part of: CCS41_RS00205
location: 51299..52123
location: region:51299-52123:1
so has part: feature:51299-52123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51299-52123:1:exon

CCS41_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00210
old locus tag: CCS41_00210
so part of: sequence
location: complement(52353..53315)
location: region:52353-53315:-1
so has part: feature:52353-53315:-1:exon
subclass of: SO_0000010

position:52353:-1
position: 52353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53315:-1
position: 53315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52353-53315:-1:exon

CCS41_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00210
old locus tag: CCS41_00210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705839.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MDKTPVGIDIAKLKFDVAVWIERKKYKTKVFNNTPSGFSDLLKWLLPYGDCHICLEATSHYSVPLATFLVDNGIEVSVETPARIHAFAQSELSRNKTDQGDAKMIARYCALYSPARWFPAPLNERQLMALIRRLNHLVEMKQMECNRKEGADEIVQPFLTDSICALEKQIVEIKQKIKEHINNSPGLKKNKHLLESIPGIGEILSATLLAFVGDVSKFTSSKQVVAYAGLNPKLCESGAFKGRSRLSKVGCTELRKALYMPALSSITYNPIIKSQWKRWVKRNKGGKVGVCAAMRKLLQLAYGVLKSGLPFDTKIALAKT
SIO_010081: CCS41_RS00210
subclass of: SO_0000673
so part of: CCS41_RS00210
location: complement(52353..53315)
location: region:52353-53315:-1
so has part: feature:52353-53315:-1:exon

WP_072550650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52353-53315:-1:exon

CCS41_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00215
old locus tag: CCS41_00215
pseudo: true
so part of: sequence
location: complement(53504..53833)
location: region:53504-53833:-1
so has part: feature:53504-53833:-1:exon
subclass of: SO_0000010

position:53504:-1
position: 53504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53833:-1
position: 53833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53504-53833:-1:exon

CCS41_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00215
old locus tag: CCS41_00215
inference: COORDINATES: protein motif:HMM:NF024999.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: CCS41_RS00215
subclass of: SO_0000673
so part of: CCS41_RS00215
location: complement(53504..53833)
location: region:53504-53833:-1
so has part: feature:53504-53833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53504-53833:-1:exon

CCS41_RS15450
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15450
so part of: sequence
location: complement(53887..54033)
location: region:53887-54033:-1
so has part: feature:53887-54033:-1:exon
subclass of: SO_0000010

position:53887:-1
position: 53887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54033:-1
position: 54033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53887-54033:-1:exon

CCS41_RS15450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDITELYCLMDDFCKKFEPLLNAKLLTDGSKRRIRASSLSLAELMTL
SIO_010081: CCS41_RS15450
subclass of: SO_0000673
so part of: CCS41_RS15450
location: complement(53887..54033)
location: region:53887-54033:-1
so has part: feature:53887-54033:-1:exon

WP_162859935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53887-54033:-1:exon

CCS41_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00225
old locus tag: CCS41_00230
so part of: sequence
location: 54599..54967
location: region:54599-54967:1
so has part: feature:54599-54967:1:exon
subclass of: SO_0000010

position:54599:1
position: 54599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54967:1
position: 54967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54599-54967:1:exon

CCS41_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00225
old locus tag: CCS41_00230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MTYPLKFRQHVLAIKEQEKLTYAQTATRFCIGTASLMRWAKRIEPCLTRDKPASKIARAALILDVETYPDASQYERAQRMGVSARGICHALKRAGFSYKKNILSSKSQRPIPRRFSDQDPGL
SIO_010081: CCS41_RS00225
subclass of: SO_0000673
so part of: CCS41_RS00225
location: 54599..54967
location: region:54599-54967:1
so has part: feature:54599-54967:1:exon

WP_072549715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54599-54967:1:exon

CCS41_RS16975
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16975
so part of: sequence
location: complement(55128..55385)
location: region:55128-55385:-1
so has part: feature:55128-55385:-1:exon
subclass of: SO_0000010

position:55128:-1
position: 55128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55385:-1
position: 55385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55128-55385:-1:exon

CCS41_RS16975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16975
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFPTKGFSLSPFVLSRVEVRRIRREIFQNKTRFLYSRLDILAFVKAHIIHHDNSPLRDFWQSVLGYPRMKNIAIDIVFKGTNGG
SIO_010081: CCS41_RS16975
subclass of: SO_0000673
so part of: CCS41_RS16975
location: complement(55128..55385)
location: region:55128-55385:-1
so has part: feature:55128-55385:-1:exon

WP_275887661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55128-55385:-1:exon

CCS41_RS15855
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15855
old locus tag: CCS41_00240
so part of: sequence
location: complement(55439..55678)
location: region:55439-55678:-1
so has part: feature:55439-55678:-1:exon
subclass of: SO_0000010

position:55439:-1
position: 55439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55678:-1
position: 55678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55439-55678:-1:exon

CCS41_RS15855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15855
old locus tag: CCS41_00240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKDKILKKADEVMVEYRIINDCMKALDRVFLQASSVRFSGLALPEVSASFLSHESIRYWLKNSLFRPKGLWPLAELWL
SIO_010081: CCS41_RS15855
subclass of: SO_0000673
so part of: CCS41_RS15855
location: complement(55439..55678)
location: region:55439-55678:-1
so has part: feature:55439-55678:-1:exon

WP_119797000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55439-55678:-1:exon

CCS41_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00240
old locus tag: CCS41_00245
so part of: sequence
location: 55758..56582
location: region:55758-56582:1
so has part: feature:55758-56582:1:exon
subclass of: SO_0000010

position:55758:1
position: 55758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56582:1
position: 56582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55758-56582:1:exon

CCS41_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00240
old locus tag: CCS41_00245
inference: COORDINATES: protein motif:HMM:NF013752.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSGYPCTKDLYKAFLQASRVRYSGLALSEVSPSRVSHDSVIRRLKSRCFRPKELCQLVAPSIERGAPCLVIAADTVLAKKRSKKIELFHYQYSGNEQGVIAGIGLVNLLWQGLETGESVPIDYRIDDKETAGKTKSSHFCDMLKLAKARGISPEAVVMDAWYSSLDNLNAIRSPGWIGVTTLRKHRIVNRNVTLASLDIPEEGLSVHLRGDGWVTVFKFVAKHGCIDYVATNQETPTRGQISAVTEARRSVEVYHREITQTCGIERCQARTGRA
SIO_010081: CCS41_RS00240
subclass of: SO_0000673
so part of: CCS41_RS00240
location: 55758..56582
location: region:55758-56582:1
so has part: feature:55758-56582:1:exon

WP_205411441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55758-56582:1:exon

CCS41_RS16980
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16980
so part of: sequence
location: 56604..56732
location: region:56604-56732:1
so has part: feature:56604-56732:1:exon
subclass of: SO_0000010

position:56604:1
position: 56604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56732:1
position: 56732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56604-56732:1:exon

CCS41_RS16980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAWFEQHKRRLSEKITLYQQNWAVIKNAITEHIRLLLASPG
SIO_010081: CCS41_RS16980
subclass of: SO_0000673
so part of: CCS41_RS16980
location: 56604..56732
location: region:56604-56732:1
so has part: feature:56604-56732:1:exon

WP_275887662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56604-56732:1:exon

CCS41_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00245
old locus tag: CCS41_00250
so part of: sequence
location: 57106..58651
location: region:57106-58651:1
so has part: feature:57106-58651:1:exon
subclass of: SO_0000573

position:57106:1
position: 57106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58651:1
position: 58651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57106-58651:1:exon

CCS41_RS00245
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1878942
locus tag: CCS41_RS00245
old locus tag: CCS41_00250
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CCS41_RS00245
subclass of: SO_0000673
so part of: CCS41_RS00245
location: 57106..58651
location: region:57106-58651:1
so has part: feature:57106-58651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57106-58651:1:exon

CCS41_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00250
old locus tag: CCS41_00255
so part of: sequence
location: 58732..58807
location: region:58732-58807:1
so has part: feature:58732-58807:1:exon
subclass of: SO_0000663

position:58732:1
position: 58732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58807:1
position: 58807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58732-58807:1:exon

CCS41_RS00250
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS00250
old locus tag: CCS41_00255
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:58766..58768,aa:Glu,seq:ttc)
SIO_010081: CCS41_RS00250
subclass of: SO_0000673
so part of: CCS41_RS00250
location: 58732..58807
location: region:58732-58807:1
so has part: feature:58732-58807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58732-58807:1:exon

CCS41_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00255
old locus tag: CCS41_00260
so part of: sequence
location: 58997..61908
location: region:58997-61908:1
so has part: feature:58997-61908:1:exon
subclass of: SO_0000573

position:58997:1
position: 58997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61908:1
position: 61908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58997-61908:1:exon

CCS41_RS00255
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1878942
locus tag: CCS41_RS00255
old locus tag: CCS41_00260
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CCS41_RS00255
subclass of: SO_0000673
so part of: CCS41_RS00255
location: 58997..61908
location: region:58997-61908:1
so has part: feature:58997-61908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58997-61908:1:exon

CCS41_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rrf
locus tag: CCS41_RS00260
old locus tag: CCS41_00265
so part of: sequence
location: 61993..62108
location: region:61993-62108:1
so has part: feature:61993-62108:1:exon
subclass of: SO_0000573

position:61993:1
position: 61993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62108:1
position: 62108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61993-62108:1:exon

CCS41_RS00260
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1878942
gene: rrf
locus tag: CCS41_RS00260
old locus tag: CCS41_00265
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CCS41_RS00260
subclass of: SO_0000673
so part of: CCS41_RS00260
location: 61993..62108
location: region:61993-62108:1
so has part: feature:61993-62108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61993-62108:1:exon

CCS41_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00265
old locus tag: CCS41_00270
so part of: sequence
location: 63117..64409
location: region:63117-64409:1
so has part: feature:63117-64409:1:exon
subclass of: SO_0000010

position:63117:1
position: 63117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64409:1
position: 64409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63117-64409:1:exon

CCS41_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00265
old locus tag: CCS41_00270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008812952.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAAAP family serine/threonine permease
translation: MDTTQSAASVSQKRTLVGTWRKSDTTWMLGLYGTAIGAGVLFLPINAGVGGLLPLIIMAIIAFPMTFFAHRGLCRFVLSGKNPGEDITEVVEEHFGIGTGKLITLLYFFAIYPILLVYGVAITNTVDSFIVNQIHLPSPPRAILSLILIAGLMIIVRFGENFMVKAVSVLVFPFVAVLTLLALYLIPHWSGAIFESLSVEGNGVGQGMLMTLWLVIPVMVFAFNHSPIISAFAVAKREEYGNAAEEKCSRILVYSHILMVLTVMFFVFSCVLSLSPADLMAAKAQNISILSYLANRLNTPIIAYVAPIIAFVAISTSFFGHYMGAREGFNRMVIKSLYRKGKTVHPDKLNRITAFFMLVSTWIVATLNPSILGMIENLGGPIIAMLLFLMPMYAINKVPAMHKYRGDISNIFVIIMGLISISAILYSLLG
SIO_010081: CCS41_RS00265
subclass of: SO_0000673
so part of: CCS41_RS00265
location: 63117..64409
location: region:63117-64409:1
so has part: feature:63117-64409:1:exon

WP_072550988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63117-64409:1:exon

CCS41_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: mrcB
locus tag: CCS41_RS00270
old locus tag: CCS41_00275
so part of: sequence
location: 64959..67454
location: region:64959-67454:1
so has part: feature:64959-67454:1:exon
subclass of: SO_0000010

position:64959:1
position: 64959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67454:1
position: 67454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64959-67454:1:exon

CCS41_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: mrcB
locus tag: CCS41_RS00270
old locus tag: CCS41_00275
EC number: 2.4.1.129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005181556.1
GO component: GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
GO function: GO:0008658 - penicillin binding [Evidence IEA]; GO:0008955 - peptidoglycan glycosyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional glycosyl transferase/transpeptidase
translation: MSRNDRNPLDRDPIGRKKRKSISNPKQKKPSARRRDDDEENFLEEGDEEQESMRSKKKSSPVRKKRRWLGLSIKLFLVIVLLLVGYGVYLNGEIRKRIDGQVWDLPAAVYGRVLNLEPGMAYSKKEMINLLEAMQYRQVSRMTRPGEFTVQGSSIEMLRRPFDFPDGKEGQIHARLLFSNDHLTQIENLDNQRRFGFFRLDPKLITMLQSPNGEQRLFVSRSGFPELLVDTLLTTEDRHFYQHDGISFYSIARAILANLTAGKTVQGGSTLTQQLVKNMFLTNERSLLRKANEAYMALLVDYRYSKDRILELYLNEVYLGQNGSDQIRGFPLASLYYFGRPVNELSLDQQAMLVGMVKGASLYNPWRNPKLALERRNLVLKLLQNQGVIDAELYNMLSVRPLGVQPRGGVISPQPAFMQMVRQELQQKLGDKVNDLSGVKIFTTLDPVSQDAAEKSVENGMPVLKAARHIDDLETAMVVVDRLSGEIHAMVGGAQPQFAGFNRAMQARRPIGSLAKPSTYLTALSQPDKYRLNTWLADQPLALKQPNGSVWQPKNYNRQFSGRTMLLDALVNSLNVPTVNLGLSVGLDQISATLQRLGISSSVINLVPAMLLGSTSLTPLEVAQEYQTIASGGNRATLSALRAVIAEDGTVLYRSFPQAERMIPAQAAYLTLYGMQQVVVRGTSRALEAKFSHYNLAAKTGTTNDLRDSWFAGVDGKEVAIVWVGRDNNGPAQLTGANGALTLYRRYLENQTPLPLTLQPPEGIVEMNIDAAGNFICGTDSHWRTIPVWTENPSGLCKMTQEAPRQFEEQLFEEHKSEEDGVTNWIKDIFG
SIO_010081: CCS41_RS00270
subclass of: SO_0000673
so part of: CCS41_RS00270
location: 64959..67454
location: region:64959-67454:1
so has part: feature:64959-67454:1:exon

WP_072550987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64959-67454:1:exon

CCS41_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: cmoA
locus tag: CCS41_RS00275
old locus tag: CCS41_00280
so part of: sequence
location: 67546..68343
location: region:67546-68343:1
so has part: feature:67546-68343:1:exon
subclass of: SO_0000010

position:67546:1
position: 67546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68343:1
position: 68343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67546-68343:1:exon

CCS41_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: cmoA
locus tag: CCS41_RS00275
old locus tag: CCS41_00280
EC number: 2.1.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004698998.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxy-S-adenosyl-L-methionine synthase CmoA
translation: MLDTHFPFPEDSLPERRLQAQRDNLFATPIAKLGDWTFDEQVADVFPDMIQRSVPGYANIITMIGMLAKRFVQPHSQIYDLGCALGAAALSVRLNIDVPGCKIIAIDNSPAMVNRCRYHIEALPADTPVEVMEADILAIPLENASMVVLNFTLQFINPSDRQHLLNRIYQSLRPGCVLVLSEKFTFEDAQVGELLFDMHHDFKRANGYSELEISQKRSMLENIMLTDSVETHKKRLRQAGFEHTELWFQCLNFGSLIALKTEKTT
SIO_010081: CCS41_RS00275
subclass of: SO_0000673
so part of: CCS41_RS00275
location: 67546..68343
location: region:67546-68343:1
so has part: feature:67546-68343:1:exon

WP_072550990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67546-68343:1:exon

CCS41_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: cmoB
locus tag: CCS41_RS00280
old locus tag: CCS41_00285
pseudo: true
so part of: sequence
location: 68340..69262
location: region:68340-69262:1
so has part: feature:68340-69262:1:exon
subclass of: SO_0000010

position:68340:1
position: 68340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69262:1
position: 69262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68340-69262:1:exon

CCS41_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: cmoB
locus tag: CCS41_RS00280
old locus tag: CCS41_00285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004945559.1
GO function: GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
GO process: GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
SIO_010081: CCS41_RS00280
subclass of: SO_0000673
so part of: CCS41_RS00280
location: 68340..69262
location: region:68340-69262:1
so has part: feature:68340-69262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68340-69262:1:exon

CCS41_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00285
old locus tag: CCS41_00290
so part of: sequence
location: complement(69324..69587)
location: region:69324-69587:-1
so has part: feature:69324-69587:-1:exon
subclass of: SO_0000010

position:69324:-1
position: 69324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69587:-1
position: 69587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69324-69587:-1:exon

CCS41_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00285
old locus tag: CCS41_00290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004874270.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3811 domain-containing protein
translation: MKKLTLKEMTASEQLEVKTQLGRARVNLGRTLTNSEQNKIKDAAVSDIMQKRAKLATANRSKRKGAKTTSSTTTFNWSDSISTRPSR
SIO_010081: CCS41_RS00285
subclass of: SO_0000673
so part of: CCS41_RS00285
location: complement(69324..69587)
location: region:69324-69587:-1
so has part: feature:69324-69587:-1:exon

WP_072550985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69324-69587:-1:exon

CCS41_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00290
old locus tag: CCS41_00295
so part of: sequence
location: complement(69646..70182)
location: region:69646-70182:-1
so has part: feature:69646-70182:-1:exon
subclass of: SO_0000010

position:69646:-1
position: 69646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70182:-1
position: 70182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69646-70182:-1:exon

CCS41_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00290
old locus tag: CCS41_00295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705979.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor P hydroxylase
translation: MRHHYQQLITIFNQCFTNHYNTRLLKGDDEPIYLPANEQTSYHRIIFAHGFYASALHEIAHWCIAGEERRKLVDFGYWYCPDGRDALKQSQFEKLEIKPQALEWLFCTAAGFPFNVSCDNLQGNSEPDREAFLCKVHEQVLCYLTQGISARTVCFIQALHSFYKTPPLTAAHFSAVRI
SIO_010081: CCS41_RS00290
subclass of: SO_0000673
so part of: CCS41_RS00290
location: complement(69646..70182)
location: region:69646-70182:-1
so has part: feature:69646-70182:-1:exon

WP_072550984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69646-70182:-1:exon

CCS41_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: aroC
locus tag: CCS41_RS00295
old locus tag: CCS41_00300
so part of: sequence
location: complement(70350..71423)
location: region:70350-71423:-1
so has part: feature:70350-71423:-1:exon
subclass of: SO_0000010

position:70350:-1
position: 70350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71423:-1
position: 71423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70350-71423:-1:exon

CCS41_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: aroC
locus tag: CCS41_RS00295
old locus tag: CCS41_00300
EC number: 4.2.3.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704852.1
GO function: GO:0004107 - chorismate synthase activity [Evidence IEA]
GO process: GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chorismate synthase
translation: MAGNSIGQFFRVTTFGESHGIALGCIIDGVPPGIPLSPEDLQKDLDRRRPGASRYTSPRLELDRVHILSGVFGGVTSGTSVGLMIENTDPRPQDYSEIKDTFRPGHADYTYEKKFGVRDYRGGGRASARETVMRVAAGAIAKKYLLQHSGIQIRGYLSQIGDICCELKDWNLVEENPFFCPDASKLEQLDALIRDLKKVGDSIGAKITVVAENVPVGLGEPVFDRLDADLAHALMSVNAVKGVEIGAGFSVVNKRGSENRDEITMQGFQSNHAGGILGGISSGQPLIAHLALKPTSSIRVPGKTINRQGETVAIVTSGRHDPCVGLRAVPIAEAMMAIILMDHLLRQRAQCGEPQPV
SIO_010081: CCS41_RS00295
subclass of: SO_0000673
so part of: CCS41_RS00295
location: complement(70350..71423)
location: region:70350-71423:-1
so has part: feature:70350-71423:-1:exon

WP_072550983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70350-71423:-1:exon

CCS41_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: prmB
locus tag: CCS41_RS00300
old locus tag: CCS41_00305
so part of: sequence
location: complement(71595..72530)
location: region:71595-72530:-1
so has part: feature:71595-72530:-1:exon
subclass of: SO_0000010

position:71595:-1
position: 71595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72530:-1
position: 72530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71595-72530:-1:exon

CCS41_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: prmB
locus tag: CCS41_RS00300
old locus tag: CCS41_00305
EC number: 2.1.1.298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019081969.1
GO function: GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0042273 - ribosomal large subunit biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3 N(5)-glutamine methyltransferase
translation: MKKIFVDKVVNELHTVVDMLRWAVSCFNAADLYYGHGTDNPWDEALKLVLPSLYLPVDMPIDILCHARLISDERQLIVERVKCRVEKRIPVAYLTNKVWFCGQEYYVDQRVLVPRSPIGELIDKRFDDLLVGIPKYILDICTGSGCIAIACAHAFEQAEIDAVDISEEVLAVTEYNIQQHAVEQRVTPIRSDLFRDLPPMQYDLIVTNPPYVDAEDMADLPPEFRCEPELGLVAGSDGLKLINRVLACAPDFLQDDGVLICEVGNSMVRLIEHYPNIPFNWLKFDRGGDGVFMLTQQQLKEYHHHFCFYRN
SIO_010081: CCS41_RS00300
subclass of: SO_0000673
so part of: CCS41_RS00300
location: complement(71595..72530)
location: region:71595-72530:-1
so has part: feature:71595-72530:-1:exon

WP_072550989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71595-72530:-1:exon

CCS41_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00305
old locus tag: CCS41_00310
so part of: sequence
location: complement(72609..72935)
location: region:72609-72935:-1
so has part: feature:72609-72935:-1:exon
subclass of: SO_0000010

position:72609:-1
position: 72609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72935:-1
position: 72935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72609-72935:-1:exon

CCS41_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00305
old locus tag: CCS41_00310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTKIKGREDNKMNVPLIFGVAYGVLLHHLPSRAQQTQHWQYKCLDLGGIQLIAKGTIHNRFDNLQVPNSKQKVVSVQNVYPGTPITLPNIKRLTGQVEREAFAISCS
SIO_010081: CCS41_RS00305
subclass of: SO_0000673
so part of: CCS41_RS00305
location: complement(72609..72935)
location: region:72609-72935:-1
so has part: feature:72609-72935:-1:exon

WP_205411442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72609-72935:-1:exon

CCS41_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00310
old locus tag: CCS41_00315
so part of: sequence
location: complement(73103..74161)
location: region:73103-74161:-1
so has part: feature:73103-74161:-1:exon
subclass of: SO_0000010

position:73103:-1
position: 73103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74161:-1
position: 74161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73103-74161:-1:exon

CCS41_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00310
old locus tag: CCS41_00315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706789.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MARKRKPANRDLPPNLYVRNNGYYCYRDPRTGKEYGVGSVKRIAINEAIAMNRQIFDQHYSLVDRINEVNTLSVTEWVAKFKEKLHQRGLRSNTIRDYQSRLTAITRAFSDKALSTLTTKEIAEFLNSYSDQGKTTSAKLLRSLLIDMFNEAIAEGHLETNPVTATRSPRVQVNRERLSLEEFIVIREAANQRQPWIGLSMDLALLTGQRVGDIQRMKWQDIYDGKWWVEQQKTGMKLAIPLTLSLAIIDKNVEGILNDCRQRIRDEKYVFIGKKKTQLSAKSLSQGFTHSREQSGLKWQGKPPSFHEIRSLSARLHSDARGKDFAQKLLGHKSSAMTDKYRDSRGSEWDEI
SIO_010081: CCS41_RS00310
subclass of: SO_0000673
so part of: CCS41_RS00310
location: complement(73103..74161)
location: region:73103-74161:-1
so has part: feature:73103-74161:-1:exon

WP_072550981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73103-74161:-1:exon

CCS41_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00315
old locus tag: CCS41_00320
so part of: sequence
location: complement(74136..74366)
location: region:74136-74366:-1
so has part: feature:74136-74366:-1:exon
subclass of: SO_0000010

position:74136:-1
position: 74136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74366:-1
position: 74366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74136-74366:-1:exon

CCS41_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00315
old locus tag: CCS41_00320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706790.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excisionase
translation: MEISLKQWNQNQPRPRCMEQVRRWVRSGVIQPPPRRDGREYLVEAHAEKIDPTNPASYAGKRLMERLYHGTQKKAG
SIO_010081: CCS41_RS00315
subclass of: SO_0000673
so part of: CCS41_RS00315
location: complement(74136..74366)
location: region:74136-74366:-1
so has part: feature:74136-74366:-1:exon

WP_072550980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74136-74366:-1:exon

CCS41_RS15460
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15460
so part of: sequence
location: complement(74721..74864)
location: region:74721-74864:-1
so has part: feature:74721-74864:-1:exon
subclass of: SO_0000010

position:74721:-1
position: 74721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74864:-1
position: 74864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74721-74864:-1:exon

CCS41_RS15460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNRQSRARKRALINKALEAKKNEKKNWFTRLRSWFKKKKKPTHRLP
SIO_010081: CCS41_RS15460
subclass of: SO_0000673
so part of: CCS41_RS15460
location: complement(74721..74864)
location: region:74721-74864:-1
so has part: feature:74721-74864:-1:exon

WP_162859937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74721-74864:-1:exon

CCS41_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00320
old locus tag: CCS41_00325
so part of: sequence
location: complement(74876..75559)
location: region:74876-75559:-1
so has part: feature:74876-75559:-1:exon
subclass of: SO_0000010

position:74876:-1
position: 74876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75559:-1
position: 75559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74876-75559:-1:exon

CCS41_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00320
old locus tag: CCS41_00325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704290.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MRKIDLPSRSFPLTSIMENSQDVWGIKDRDSRFIYANRAFFDFLNLPQGFDVIGRRDDELPTCITEFALIIQKLGKEVIKSGQKITLIKTHFFGREQKLQPYLYETFPLHNKRNKCIGTVFYGRKLAIVSLPHYIDKLTATLLFEPPSNLFTQSELRIIFYLLRTMSAKEIGKTLARSHRTIENRIRIIYQKAKVHSFRDFKHFCHKTGFDRTIPHAFIRPGIQFIE
SIO_010081: CCS41_RS00320
subclass of: SO_0000673
so part of: CCS41_RS00320
location: complement(74876..75559)
location: region:74876-75559:-1
so has part: feature:74876-75559:-1:exon

WP_072550979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74876-75559:-1:exon

CCS41_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00325
old locus tag: CCS41_00330
so part of: sequence
location: complement(75913..76176)
location: region:75913-76176:-1
so has part: feature:75913-76176:-1:exon
subclass of: SO_0000010

position:75913:-1
position: 75913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76176:-1
position: 76176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75913-76176:-1:exon

CCS41_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00325
old locus tag: CCS41_00330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MANIDITQFPELREVFPELTPVQFETAMLFSLGVSQKEISELRSISYKVVKQTLEAAKIKFEPRSLHGLLTIFHVHLVLFALQQCVK
SIO_010081: CCS41_RS00325
subclass of: SO_0000673
so part of: CCS41_RS00325
location: complement(75913..76176)
location: region:75913-76176:-1
so has part: feature:75913-76176:-1:exon

WP_072550978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75913-76176:-1:exon

CCS41_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00330
old locus tag: CCS41_00335
so part of: sequence
location: complement(76339..77103)
location: region:76339-77103:-1
so has part: feature:76339-77103:-1:exon
subclass of: SO_0000010

position:76339:-1
position: 76339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77103:-1
position: 77103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76339-77103:-1:exon

CCS41_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00330
old locus tag: CCS41_00335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410601.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
translation: MSNVITIYQQVKMSSREIAQLTDKQHKHVLDDCRKMFESINIQSAEFSADYKDASGRTYQEYLLDQDLTMTLVMGYSISLRYKVATRWRELEQKATRPICVLPNFEDPPVAAMAWAEQFREKTRLALVNKEQEAELQELKNLFKEGITTTQFCKMLNGINIQQINHCLAERNWLYNESKSHIRWRATSYARDRYLTEHQHKISIHSGDDFIKYQPVLLRKGAIRLFDLYRKNKLPMKTHWNGHFTHEKELSIAS
SIO_010081: CCS41_RS00330
subclass of: SO_0000673
so part of: CCS41_RS00330
location: complement(76339..77103)
location: region:76339-77103:-1
so has part: feature:76339-77103:-1:exon

WP_072550977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76339-77103:-1:exon

CCS41_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00335
old locus tag: CCS41_00340
so part of: sequence
location: complement(77145..77477)
location: region:77145-77477:-1
so has part: feature:77145-77477:-1:exon
subclass of: SO_0000010

position:77145:-1
position: 77145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77477:-1
position: 77477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77145-77477:-1:exon

CCS41_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00335
old locus tag: CCS41_00340
inference: COORDINATES: similar to AA sequence:RefSeq:NP_459872.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ORF6N domain-containing protein
translation: MPNIIDIHQQAPLNPENLPVIIYHKQRVISTELLAQGYGTDGNNIQQNFKRNKERFIEGKHYYKVEGEELKAFRNQLTVSRLINIQHAGIIPRWVPFRLSGGKCPQITLH
SIO_010081: CCS41_RS00335
subclass of: SO_0000673
so part of: CCS41_RS00335
location: complement(77145..77477)
location: region:77145-77477:-1
so has part: feature:77145-77477:-1:exon

WP_072550976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77145-77477:-1:exon

CCS41_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00340
old locus tag: CCS41_00345
so part of: sequence
location: complement(77540..78127)
location: region:77540-78127:-1
so has part: feature:77540-78127:-1:exon
subclass of: SO_0000010

position:77540:-1
position: 77540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78127:-1
position: 78127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77540-78127:-1:exon

CCS41_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00340
old locus tag: CCS41_00345
inference: COORDINATES: protein motif:HMM:TIGR02681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
translation: MTTQLLALTPEVIINNGKAVTTSQAVAGYFSKLHKDVLKKVDTLNCSFEFNERNFTPVEYTDAKGEKRPMYEMTKDGFMFLVMGFTGKKAAIFKEAYIAEFNRMEAELYDTSRISKNNSKPTQIEIDCYHIQAFMEHFTAISDAWRHEIYPALVKLNSPLAYRLCDRFKDGMVFANFVNRSLKAQLPTGATPRRN
SIO_010081: CCS41_RS00340
subclass of: SO_0000673
so part of: CCS41_RS00340
location: complement(77540..78127)
location: region:77540-78127:-1
so has part: feature:77540-78127:-1:exon

WP_083429657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77540-78127:-1:exon

CCS41_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00345
old locus tag: CCS41_00350
so part of: sequence
location: 78420..78662
location: region:78420-78662:1
so has part: feature:78420-78662:1:exon
subclass of: SO_0000010

position:78420:1
position: 78420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78662:1
position: 78662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78420-78662:1:exon

CCS41_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00345
old locus tag: CCS41_00350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004152453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1902 domain-containing protein
translation: MAQVAFKSKFNVTVTHEDRIWIGVCDDLGLVTEANSYEELTSRIWKIAPELYVENGFGDISDQIRITFLQEQESIFRVAL
SIO_010081: CCS41_RS00345
subclass of: SO_0000673
so part of: CCS41_RS00345
location: 78420..78662
location: region:78420-78662:1
so has part: feature:78420-78662:1:exon

WP_072550975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78420-78662:1:exon

CCS41_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00350
old locus tag: CCS41_00355
so part of: sequence
location: 78666..78863
location: region:78666-78863:1
so has part: feature:78666-78863:1:exon
subclass of: SO_0000010

position:78666:1
position: 78666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78863:1
position: 78863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78666-78863:1:exon

CCS41_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00350
old locus tag: CCS41_00355
inference: COORDINATES: protein motif:HMM:NF019540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MGQGIYSQLRDVLLDHHCRFIRQGKGSHEIWKSPLNNKNFSVPVTIFSKNTANAILRQAGINTKI
SIO_010081: CCS41_RS00350
subclass of: SO_0000673
so part of: CCS41_RS00350
location: 78666..78863
location: region:78666-78863:1
so has part: feature:78666-78863:1:exon

WP_072550974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78666-78863:1:exon

CCS41_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00355
old locus tag: CCS41_00360
so part of: sequence
location: complement(78946..79749)
location: region:78946-79749:-1
so has part: feature:78946-79749:-1:exon
subclass of: SO_0000010

position:78946:-1
position: 78946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79749:-1
position: 79749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78946-79749:-1:exon

CCS41_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00355
old locus tag: CCS41_00360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873968.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BRO family protein
translation: MPTDSQTQLMIFKTADSNIELKGMLYNDKPVFFAVELAKVLGYTDPHQALKNHCKSLIKINSVELTELGLGSRPKGIIFATEADAYRLILKSNLPSAERIQDWLCEEVLPALRQQGSYHIKRTHRDEGSGLPEFRKARAMQIAMQIAMEVAEKTFAWATDLSSLSRQVVIAGLINPLAGCEVVPLPLLIEKLYTAGEIGKLFDMSANKIGRIANDNDMKTEQYGEFYLDKSRHSDKQVQAFRYNNHALNKFRQILIAEQETKENARV
SIO_010081: CCS41_RS00355
subclass of: SO_0000673
so part of: CCS41_RS00355
location: complement(78946..79749)
location: region:78946-79749:-1
so has part: feature:78946-79749:-1:exon

WP_072550973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78946-79749:-1:exon

CCS41_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00360
old locus tag: CCS41_00365
so part of: sequence
location: complement(79997..80956)
location: region:79997-80956:-1
so has part: feature:79997-80956:-1:exon
subclass of: SO_0000010

position:79997:-1
position: 79997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80956:-1
position: 80956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79997-80956:-1:exon

CCS41_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00360
old locus tag: CCS41_00365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704718.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MPDISKPHDKLFKGTLQHRQITLDWLKAHLPKRILKLIDISTLKMVPNELSPKWPDTLYSDVVFSCKIKGQLSYIYILAEHQSSDDEMMAFRILCYVVELMNYHLKQGHKKLPIVLPLVLYHGEKSPYPHSRAIWECFEEPKLAKKLALKPFQLIDLTVMSDEEINTHGLASVMEILFKHYREKQSPLTWLEALLSEEKMTTIYTQVSRDYFKDVLRYFIEICGRASDLAESDELDKSLALSLNSVPQAKEDIMTFAQQLEKRGEKRGIEQGMQQGMQQGERQASLKMAKQLLASNVSRDIIKKITGFSEEELDSMMLH
SIO_010081: CCS41_RS00360
subclass of: SO_0000673
so part of: CCS41_RS00360
location: complement(79997..80956)
location: region:79997-80956:-1
so has part: feature:79997-80956:-1:exon

WP_119797002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79997-80956:-1:exon

CCS41_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00365
old locus tag: CCS41_00370
so part of: sequence
location: complement(81066..81686)
location: region:81066-81686:-1
so has part: feature:81066-81686:-1:exon
subclass of: SO_0000010

position:81066:-1
position: 81066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81686:-1
position: 81686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81066-81686:-1:exon

CCS41_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00365
old locus tag: CCS41_00370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704143.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaJ viral recombinase family protein
translation: MEQRTDEWFAARCGKVTASKLADVMAKVKTGDAATRKKYRAELICQRLTGKREDTFVTLDMKHGTALEPVAREAYLLREFAVEVTEVGLVDHPTIKGFAASPDGLVNEDGLIEIKCPKTWTHLKTLKTGELKREYLLQMHAQMLCTERRWCDFVSYDNRLPPELAYFKKRIHFDEALGKEIETEVCKFLQELEDEIEQIKTYGKVA
SIO_010081: CCS41_RS00365
subclass of: SO_0000673
so part of: CCS41_RS00365
location: complement(81066..81686)
location: region:81066-81686:-1
so has part: feature:81066-81686:-1:exon

WP_119797003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81066-81686:-1:exon

CCS41_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00370
old locus tag: CCS41_00375
so part of: sequence
location: complement(81731..82177)
location: region:81731-82177:-1
so has part: feature:81731-82177:-1:exon
subclass of: SO_0000010

position:81731:-1
position: 81731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82177:-1
position: 82177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81731-82177:-1:exon

CCS41_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00370
old locus tag: CCS41_00375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704142.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAHTITLKLQQAAREFAATDAIGFALRGGVKYYDRKLKTHAFTNYQAVLFAKAGNQADFYRERLNPGAIVELFGESIKIDTYEGKNGQAIVLELNNARLGFIEAGGTQPQGQQRQQNQQLWGQASMKAVSQQQCNPTPPIAFDEPIPF
SIO_010081: CCS41_RS00370
subclass of: SO_0000673
so part of: CCS41_RS00370
location: complement(81731..82177)
location: region:81731-82177:-1
so has part: feature:81731-82177:-1:exon

WP_119797004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81731-82177:-1:exon

CCS41_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00375
old locus tag: CCS41_00380
so part of: sequence
location: complement(82246..82791)
location: region:82246-82791:-1
so has part: feature:82246-82791:-1:exon
subclass of: SO_0000010

position:82246:-1
position: 82246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82791:-1
position: 82791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82246-82791:-1:exon

CCS41_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00375
old locus tag: CCS41_00380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001351815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ERF family protein
translation: MENKAFYLKLATIQRELNAPKNQYNTFGKYHYRSCEDILEGVKPLLGDLFLSISDEIVQMGDRYYVKATATLTDGENSFQASAIAREELNKKGMDAAQLTGATSSYARKYCLNGLFAIDDAKDADTEAYKQQENKGTPQTKPTAARTPEQYLTDFTHWAHQCKDKVALQGAYNRLSQLLIQ
SIO_010081: CCS41_RS00375
subclass of: SO_0000673
so part of: CCS41_RS00375
location: complement(82246..82791)
location: region:82246-82791:-1
so has part: feature:82246-82791:-1:exon

WP_240313780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82246-82791:-1:exon

CCS41_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00380
old locus tag: CCS41_00385
so part of: sequence
location: complement(82781..83086)
location: region:82781-83086:-1
so has part: feature:82781-83086:-1:exon
subclass of: SO_0000010

position:82781:-1
position: 82781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83086:-1
position: 83086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82781-83086:-1:exon

CCS41_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00380
old locus tag: CCS41_00385
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPETLIEARKIMNTFSDQDWHNINQQAEEWDKYFTFDHIAQLFKKLPHFDSEALSLALADTEPDDLDEAFFSIFISKAKWMLAKERLYHRDEYNEVYYGE
SIO_010081: CCS41_RS00380
subclass of: SO_0000673
so part of: CCS41_RS00380
location: complement(82781..83086)
location: region:82781-83086:-1
so has part: feature:82781-83086:-1:exon

WP_119797006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82781-83086:-1:exon

CCS41_RS16985
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16985
so part of: sequence
location: complement(83211..83345)
location: region:83211-83345:-1
so has part: feature:83211-83345:-1:exon
subclass of: SO_0000010

position:83211:-1
position: 83211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83345:-1
position: 83345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83211-83345:-1:exon

CCS41_RS16985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDFLSEHRITLWPYSTPAEKPKRNQFIDLFIWLKKTLNQRGEP
SIO_010081: CCS41_RS16985
subclass of: SO_0000673
so part of: CCS41_RS16985
location: complement(83211..83345)
location: region:83211-83345:-1
so has part: feature:83211-83345:-1:exon

WP_275887663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83211-83345:-1:exon

CCS41_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00385
old locus tag: CCS41_00390
so part of: sequence
location: complement(83382..83705)
location: region:83382-83705:-1
so has part: feature:83382-83705:-1:exon
subclass of: SO_0000010

position:83382:-1
position: 83382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83705:-1
position: 83705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83382-83705:-1:exon

CCS41_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00385
old locus tag: CCS41_00390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATIIYKPSRRKATYGGNAKYRRHQRRKAQAISREAIENSLGRRVGHHEKIARAQPRSEVDRAIALATTFPLRKKPQDSLYNRLMPRAWLFSVRGTRRTNKVITASA
SIO_010081: CCS41_RS00385
subclass of: SO_0000673
so part of: CCS41_RS00385
location: complement(83382..83705)
location: region:83382-83705:-1
so has part: feature:83382-83705:-1:exon

WP_119797007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83382-83705:-1:exon

CCS41_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00390
old locus tag: CCS41_00395
so part of: sequence
location: complement(84024..84692)
location: region:84024-84692:-1
so has part: feature:84024-84692:-1:exon
subclass of: SO_0000010

position:84024:-1
position: 84024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84692:-1
position: 84692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84024-84692:-1:exon

CCS41_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00390
old locus tag: CCS41_00395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007888173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LexA family transcriptional regulator
translation: MKTNDKIRQDNARKLRDSTGGNKSFSMLLDREATQISRIIGKNPTKKIGDDLARHIEKCFSLPVGWLDKEHLATDTATFQDISTINFEIRMIPIISWVQAGAWTEINHTEVDLSLTEKYSCPIPCGKMTYILRVIGDSMIDEYKPGDMIFVDPEVAPVHGDDVVALCIDSSEATFKRLVEDSGKKYLKALNKNWPEQYIKINGNCSIIGTVIFSGKPRRYKR
SIO_010081: CCS41_RS00390
subclass of: SO_0000673
so part of: CCS41_RS00390
location: complement(84024..84692)
location: region:84024-84692:-1
so has part: feature:84024-84692:-1:exon

WP_119797008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84024-84692:-1:exon

CCS41_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00395
old locus tag: CCS41_00400
so part of: sequence
location: 84779..85027
location: region:84779-85027:1
so has part: feature:84779-85027:1:exon
subclass of: SO_0000010

position:84779:1
position: 84779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85027:1
position: 85027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84779-85027:1:exon

CCS41_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00395
old locus tag: CCS41_00400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013575103.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdaS family helix-turn-helix protein
translation: MKEYWNNLTKSEQLALARHVGSSTEYLRLVFNGYKKAGFSLAKRLEGVTQGGVTKNQLRPDIYENFTIKLQAEELPIKKQYT
SIO_010081: CCS41_RS00395
subclass of: SO_0000673
so part of: CCS41_RS00395
location: 84779..85027
location: region:84779-85027:1
so has part: feature:84779-85027:1:exon

WP_119797009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84779-85027:1:exon

CCS41_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00400
old locus tag: CCS41_00405
so part of: sequence
location: 85167..85664
location: region:85167-85664:1
so has part: feature:85167-85664:1:exon
subclass of: SO_0000010

position:85167:1
position: 85167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85664:1
position: 85664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85167-85664:1:exon

CCS41_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00400
old locus tag: CCS41_00405
inference: COORDINATES: protein motif:HMM:NF041471.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YmfL family putative regulatory protein
translation: MEKRELINQMCERIEGGRSVAAAYLGMPESKFNNRLYESKGCRFFSIDELLALQTLSQSTLVAEYFAERSDALVVPIPSAGDVDAVELHHMGLHTTVKRSAVDQLILDAIREHGGLMNKPNRKFWMLTVNTSQHETVKFAPRCRFTVSKNTATADQAVALHKHTE
SIO_010081: CCS41_RS00400
subclass of: SO_0000673
so part of: CCS41_RS00400
location: 85167..85664
location: region:85167-85664:1
so has part: feature:85167-85664:1:exon

WP_240313781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85167-85664:1:exon

CCS41_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00405
old locus tag: CCS41_00410
so part of: sequence
location: 85667..86371
location: region:85667-86371:1
so has part: feature:85667-86371:1:exon
subclass of: SO_0000010

position:85667:1
position: 85667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86371:1
position: 86371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85667-86371:1:exon

CCS41_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00405
old locus tag: CCS41_00410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001004035.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage antirepressor KilAC domain-containing protein
translation: MNPLSNAVNPSMGSREIADLVESRHDNVKRAIERLVEKGIIRLPPMEEVKNQSDQYVFEYRVGKRDSYVVVAQLSPEFTARVVDRWQQLEEKAAYSFLPVDYLSALKTLTQEVERRQRLENPLARAAPKIDFADRVSEASGILVGNFAKLMGLRPNKLFVWLRKNHVLMGIPSRRNVPRQEYLERDYFTFRETPIETEHGMKITFTPLLTGKGQAWLTKKLREAGLLKTITNAA
SIO_010081: CCS41_RS00405
subclass of: SO_0000673
so part of: CCS41_RS00405
location: 85667..86371
location: region:85667-86371:1
so has part: feature:85667-86371:1:exon

WP_119797010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85667-86371:1:exon

CCS41_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00410
old locus tag: CCS41_00415
so part of: sequence
location: 86382..87260
location: region:86382-87260:1
so has part: feature:86382-87260:1:exon
subclass of: SO_0000010

position:86382:1
position: 86382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87260:1
position: 87260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86382-87260:1:exon

CCS41_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00410
old locus tag: CCS41_00415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019082919.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSMKLMTHAMSIKVGNPLRKLILLKLADNANDQGECWPSVPYIAHQCEMTDRSVQKHLHQLAVDGLLWIEYRKNEQGVNKSNVYHLTLNNAPKVKGENKSPGEDTGSPPGESRTLGGVSGTRGSASGTPGRGESGTPRISHSFEPVIEPVIEPNTPTASKICAIKVDECPAKREDPIPHPDCFPAQRNSPHVDTQTSLASRYAFEGKIIRLTPQDFDSWQTLFPHLDLVYELTRLDLEFRHDTPKSWFCTASQKLNYQNKRAVDGTTFKRVSGDRFAKKDYGTTVFPAWMEG
SIO_010081: CCS41_RS00410
subclass of: SO_0000673
so part of: CCS41_RS00410
location: 86382..87260
location: region:86382-87260:1
so has part: feature:86382-87260:1:exon

WP_119797011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86382-87260:1:exon

CCS41_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00415
old locus tag: CCS41_00420
so part of: sequence
location: 87172..88137
location: region:87172-88137:1
so has part: feature:87172-88137:1:exon
subclass of: SO_0000010

position:87172:1
position: 87172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88137:1
position: 88137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87172-88137:1:exon

CCS41_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00415
old locus tag: CCS41_00420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549471.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MAPPSNGFLATASPKKTTAPRYFRRGWKGNVMNVIEKIENSRQQQDLTFLEDRLKSARAPLKEIAGVRVDVAEVLCPQHGAFEQRCRTLQGFANVQQKTDCPACLHEKITVLKKNIASDQQRNQAQLIKNLLSQTGIPARFTTASFESYQPINAESLRCQKVCQAYAQKWHERLAQGGGLVMCGKPGTGKNHLAVAIAKHIITTHHASVVLTSALRITREVKSTWAKDATQTESEVIKHYTGVDMLIIDEIGVQFGSEAEKLILFEIINTRYENMKPTLLLSNLPKEDLTTYLGERVLDRMNEGGGCTLAFTWESYRARAV
SIO_010081: CCS41_RS00415
subclass of: SO_0000673
so part of: CCS41_RS00415
location: 87172..88137
location: region:87172-88137:1
so has part: feature:87172-88137:1:exon

WP_240313782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87172-88137:1:exon

CCS41_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00420
old locus tag: CCS41_00425
so part of: sequence
location: 88174..88536
location: region:88174-88536:1
so has part: feature:88174-88536:1:exon
subclass of: SO_0000010

position:88174:1
position: 88174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88536:1
position: 88536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88174-88536:1:exon

CCS41_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00420
old locus tag: CCS41_00425
EC number: 3.1.21.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001008185.1
GO function: GO:0000287 - magnesium ion binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RusA family crossover junction endodeoxyribonuclease
translation: MNEYRIVLPYPPTVNTYWRHARGRHYISKQGRQYRTEVIALIARKGLTLCLKSKLRVKVRVHVPDRRKRDLDNLLKAPLDALVHAGMIADDSVIDDLHIIRGEQVQGGRREIIITEQEAA
SIO_010081: CCS41_RS00420
subclass of: SO_0000673
so part of: CCS41_RS00420
location: 88174..88536
location: region:88174-88536:1
so has part: feature:88174-88536:1:exon

WP_119797012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88174-88536:1:exon

CCS41_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00425
old locus tag: CCS41_00430
so part of: sequence
location: 88533..89009
location: region:88533-89009:1
so has part: feature:88533-89009:1:exon
subclass of: SO_0000010

position:88533:1
position: 88533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89009:1
position: 89009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88533-89009:1:exon

CCS41_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00425
old locus tag: CCS41_00430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015973887.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0060567 - negative regulation of termination of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antiterminator Q family protein
translation: MNVTQLRLNNEQYHWVNSWLERWGAWVYSGRLEKPQSSLIAHCMATKKPQASPTRPMCNDDDGLLISRVVDTVIPVDNQAFGILLSYYVQRLSRYSIAAYSQKVAIPRNISTRGGNRFKTPSLATCRREVDQILEESLYLLHPSLEQAFKCRKRVGKI
SIO_010081: CCS41_RS00425
subclass of: SO_0000673
so part of: CCS41_RS00425
location: 88533..89009
location: region:88533-89009:1
so has part: feature:88533-89009:1:exon

WP_119797013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88533-89009:1:exon

CCS41_RS15860
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15860
old locus tag: CCS41_00435
so part of: sequence
location: 89044..89238
location: region:89044-89238:1
so has part: feature:89044-89238:1:exon
subclass of: SO_0000010

position:89044:1
position: 89044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89238:1
position: 89238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89044-89238:1:exon

CCS41_RS15860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15860
old locus tag: CCS41_00435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNDCRVPCRVYVLITNNRKTLTFAVGVFVFAFDEKDIWDYPAHSRKIGSRDWNSEYLQRHTSR
SIO_010081: CCS41_RS15860
subclass of: SO_0000673
so part of: CCS41_RS15860
location: 89044..89238
location: region:89044-89238:1
so has part: feature:89044-89238:1:exon

WP_119797014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89044-89238:1:exon

CCS41_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00435
old locus tag: CCS41_00440
so part of: sequence
location: complement(89374..89595)
location: region:89374-89595:-1
so has part: feature:89374-89595:-1:exon
subclass of: SO_0000010

position:89374:-1
position: 89374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89595:-1
position: 89595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89374-89595:-1:exon

CCS41_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00435
old locus tag: CCS41_00440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHINIFLKILPILLLPTLVWASGKYPSSPEDCNRWWEPQTPFMPSPPKICTEKKPAVQQTTPSEPKKDEINN
SIO_010081: CCS41_RS00435
subclass of: SO_0000673
so part of: CCS41_RS00435
location: complement(89374..89595)
location: region:89374-89595:-1
so has part: feature:89374-89595:-1:exon

WP_119797015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89374-89595:-1:exon

CCS41_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00440
old locus tag: CCS41_00445
so part of: sequence
location: complement(90098..90769)
location: region:90098-90769:-1
so has part: feature:90098-90769:-1:exon
subclass of: SO_0000010

position:90098:-1
position: 90098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90769:-1
position: 90769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90098-90769:-1:exon

CCS41_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00440
old locus tag: CCS41_00445
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQPTENTQPQNNPESLARLSFQSFLGRETTDAASLSIKLNEVLNKIPKNGFLSAGVNGEVFELCKEKIQESPLNLKSSGELITYLMTNGIDVNDTFTTAVFLIANNLDFVLQNTKDEISKNIATYLDNIGLNLPEESVSLVNHIMIAFFYKENMLKQVTPEKYLSAYEEARDRGNITQETYAIETEGLSLLKQGIPFKEVATRLEIKESDMAEYFRKKMLLI
SIO_010081: CCS41_RS00440
subclass of: SO_0000673
so part of: CCS41_RS00440
location: complement(90098..90769)
location: region:90098-90769:-1
so has part: feature:90098-90769:-1:exon

WP_119797016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90098-90769:-1:exon

CCS41_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00445
old locus tag: CCS41_00450
pseudo: true
so part of: sequence
location: complement(90882..>91091)
location: region:90882-91091:-1
so has part: feature:90882-91091:-1:exon
subclass of: SO_0000010

position:90882:-1
position: 90882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91091:-1
position: 91091
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90882-91091:-1:exon

CCS41_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00445
old locus tag: CCS41_00450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611091.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase family protein
SIO_010081: CCS41_RS00445
subclass of: SO_0000673
so part of: CCS41_RS00445
location: complement(90882..>91091)
location: region:90882-91091:-1
so has part: feature:90882-91091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90882-91091:-1:exon

CCS41_RS15865
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15865
so part of: sequence
location: complement(91122..91628)
location: region:91122-91628:-1
so has part: feature:91122-91628:-1:exon
subclass of: SO_0000010

position:91122:-1
position: 91122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91628:-1
position: 91628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91122-91628:-1:exon

CCS41_RS15865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15865
inference: COORDINATES: protein motif:HMM:NF016571.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MRGIRYSSLDNLNAIRSPGWIGVTTLRKNRIVNRNVTLASLDIPEEGLSVHLRGDGWVTVFKFVTKHGRIDYVATNKENPTREQMKAVTEARWSVEVYHREIKQTCGIERCQARTGRAQRNHIFLAMAAWFEQHKRRLSEKITLYQQNWAVIKNAITTHIRALLAAPG
SIO_010081: CCS41_RS15865
subclass of: SO_0000673
so part of: CCS41_RS15865
location: complement(91122..91628)
location: region:91122-91628:-1
so has part: feature:91122-91628:-1:exon

WP_205411443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91122-91628:-1:exon

CCS41_RS15870
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15870
so part of: sequence
location: complement(91597..91941)
location: region:91597-91941:-1
so has part: feature:91597-91941:-1:exon
subclass of: SO_0000010

position:91597:-1
position: 91597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91941:-1
position: 91941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91597-91941:-1:exon

CCS41_RS15870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATCRPSIDREAPCFLIADDRVLAKKRSKKIERVHYHYSGNEHDVIAGIGLVNLLWQGLEKGESVPIDYRIDDKETDGKTKNSHFCDMLKLAKARGIAPEAVVMDAWYSVFKFR
SIO_010081: CCS41_RS15870
subclass of: SO_0000673
so part of: CCS41_RS15870
location: complement(91597..91941)
location: region:91597-91941:-1
so has part: feature:91597-91941:-1:exon

WP_205411410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91597-91941:-1:exon

CCS41_RS16210
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16210
pseudo: true
so part of: sequence
location: <92171..92654
location: region:92171-92654:1
so has part: feature:92171-92654:1:exon
subclass of: SO_0000010

position:92171:1
position: 92171
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:92654:1
position: 92654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92171-92654:1:exon

CCS41_RS16210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611885.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: CCS41_RS16210
subclass of: SO_0000673
so part of: CCS41_RS16210
location: <92171..92654
location: region:92171-92654:1
so has part: feature:92171-92654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92171-92654:1:exon

CCS41_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: hemB
locus tag: CCS41_RS00465
old locus tag: CCS41_00470
so part of: sequence
location: 93769..94791
location: region:93769-94791:1
so has part: feature:93769-94791:1:exon
subclass of: SO_0000010

position:93769:1
position: 93769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94791:1
position: 94791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93769-94791:1:exon

CCS41_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: hemB
locus tag: CCS41_RS00465
old locus tag: CCS41_00470
EC number: 4.2.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004714331.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO process: GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porphobilinogen synthase
translation: MSDVFPGLFPGRRMRRIRRYDFSRRLMAENQLTVNDLIYPVFVMEGVNRQQAVSSMPDVSRMTIDRLLKEAETIARLDVPIIALFPMIETNLKSLEAKEAYNPRGLIQRTIRELKKAFPELGILTDVALDPYTTHGQDGVIDKHDYVVNDESKKILVLQVLSHAEAGADIVAPSDMMDGRIAAIRNQLEAQNWVNMQIMAYSAKYASCYYGPFRDAIGSSKNLQAGDKRTYQMDPANSDEALHEIAQDLQEGADMVMVKPGMPYLDVVRRVKDTFKVPTFAYQVSGEYAMHKAAIANHWLQEKPTIMESLLCFKRAGADGVLTYFAKQAAQWLYDEKMQP
SIO_010081: CCS41_RS00465
subclass of: SO_0000673
so part of: CCS41_RS00465
location: 93769..94791
location: region:93769-94791:1
so has part: feature:93769-94791:1:exon

WP_072549862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93769-94791:1:exon

CCS41_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: sanA
locus tag: CCS41_RS00470
old locus tag: CCS41_00475
so part of: sequence
location: complement(95349..96086)
location: region:95349-96086:-1
so has part: feature:95349-96086:-1:exon
subclass of: SO_0000010

position:95349:-1
position: 95349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96086:-1
position: 96086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95349-96086:-1:exon

CCS41_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: sanA
locus tag: CCS41_RS00470
old locus tag: CCS41_00475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004388753.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane permeability protein SanA
translation: MWKRLIISLLVMIGFLTVLAIVFDRWISWKTAPYIYEEVQLLPHREVGVVLGTAKYYRIGVINQFYRYRMQGALNAYNSGKVSYLLLSGDNAQKNYNEPRTMRRDLIKAGVAPADIVLDYAGFRTLDSIVRTHKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYATPSPKNLLSVRVRETFARLATFTDLYIFKREPRFLGPTIPIPTVHIIPSDAQGYPAVSPEQLVELENELAAEKQKNH
SIO_010081: CCS41_RS00470
subclass of: SO_0000673
so part of: CCS41_RS00470
location: complement(95349..96086)
location: region:95349-96086:-1
so has part: feature:95349-96086:-1:exon

WP_072549863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95349-96086:-1:exon

CCS41_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00475
old locus tag: CCS41_00480
so part of: sequence
location: complement(96153..97850)
location: region:96153-97850:-1
so has part: feature:96153-97850:-1:exon
subclass of: SO_0000010

position:96153:-1
position: 96153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97850:-1
position: 97850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96153-97850:-1:exon

CCS41_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00475
old locus tag: CCS41_00480
EC number: 1.1.1.38
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015835025.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent malic enzyme
translation: MVHEYDSKRPLYIPYAGSILLEFPLLNKGSAFTEDERNHFNLHGLLPEKVETIEEQVARAYQQYQEFKNDDDKHIYLRNIQDTNETLFYRLLNAHLSEMMPIIYTPTVGKACQNFSAIYRRARGLFISYPNRDRIDDMLQNATKQKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACAGISPAYTLPVVLDVGTNNQDCLQDPLYMGWKHPRIRGDEYNAFVDAFIQAVKRRWPKVLLQFEDFAQENATPLLNSYRDKLCCFNDDIQGTAAVTLGSLIAASQAVGIRLCDQTVTFLGAGSAGCGIAEQIVAQMVLEGLSEMKARARVFMVDHAGLLTDKLSDVRDFQRKLVQKSDNLHGWGPQTETISLLDVVRHAKPTVLIGVSGQPGLFNEELIREMYRHCQHPIIMPLSNPTSRIEARPEDIITWTEGNALVATGSPFPPVYYKGQIYPVAQCNNAYIFPGIGLGVLASKASKITDGMLMAASRALAQCSPLASTGEGALLPNIDNIQEVSKHIALEVAKVAQSEGVATINAPEALTESIEGNCWQAQYRTYKRTSF
SIO_010081: CCS41_RS00475
subclass of: SO_0000673
so part of: CCS41_RS00475
location: complement(96153..97850)
location: region:96153-97850:-1
so has part: feature:96153-97850:-1:exon

WP_072549864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96153-97850:-1:exon

CCS41_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: metG
locus tag: CCS41_RS00480
old locus tag: CCS41_00485
pseudo: true
so part of: sequence
location: complement(<98095..99744)
location: region:98095-99744:-1
so has part: feature:98095-99744:-1:exon
subclass of: SO_0000010

position:98095:-1
position: 98095
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:99744:-1
position: 99744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98095-99744:-1:exon

CCS41_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: metG
locus tag: CCS41_RS00480
old locus tag: CCS41_00485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015839562.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: methionine--tRNA ligase
SIO_010081: CCS41_RS00480
subclass of: SO_0000673
so part of: CCS41_RS00480
location: complement(<98095..99744)
location: region:98095-99744:-1
so has part: feature:98095-99744:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98095-99744:-1:exon

CCS41_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00485
old locus tag: CCS41_00490
pseudo: true
so part of: sequence
location: 100150..101678
location: region:100150-101678:1
so has part: feature:100150-101678:1:exon
subclass of: SO_0000010

position:100150:1
position: 100150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101678:1
position: 101678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100150-101678:1:exon

CCS41_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00485
old locus tag: CCS41_00490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002212018.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: YifB family Mg chelatase-like AAA ATPase
SIO_010081: CCS41_RS00485
subclass of: SO_0000673
so part of: CCS41_RS00485
location: 100150..101678
location: region:100150-101678:1
so has part: feature:100150-101678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100150-101678:1:exon

CCS41_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00495
old locus tag: CCS41_00500
so part of: sequence
location: 102549..102818
location: region:102549-102818:1
so has part: feature:102549-102818:1:exon
subclass of: SO_0000010

position:102549:1
position: 102549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102818:1
position: 102818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102549-102818:1:exon

CCS41_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00495
old locus tag: CCS41_00500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSMLSAFLTNYLTKTRRAQKISNRFSEKTDAQIISVRRDMDVRFEQVDKRFEQAEESLTDFKQETTKRFDKLESEFDRVQCSSLPQRLH
SIO_010081: CCS41_RS00495
subclass of: SO_0000673
so part of: CCS41_RS00495
location: 102549..102818
location: region:102549-102818:1
so has part: feature:102549-102818:1:exon

WP_072549868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102549-102818:1:exon

CCS41_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00500
old locus tag: CCS41_00505
pseudo: true
so part of: sequence
location: 102886..104126
location: region:102886-104126:1
so has part: feature:102886-104126:1:exon
subclass of: SO_0000010

position:102886:1
position: 102886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104126:1
position: 104126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102886-104126:1:exon

CCS41_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00500
old locus tag: CCS41_00505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019083387.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: O-antigen ligase family protein
SIO_010081: CCS41_RS00500
subclass of: SO_0000673
so part of: CCS41_RS00500
location: 102886..104126
location: region:102886-104126:1
so has part: feature:102886-104126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102886-104126:1:exon

CCS41_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: gspS
locus tag: CCS41_RS00505
old locus tag: CCS41_00510
so part of: sequence
location: complement(104337..104681)
location: region:104337-104681:-1
so has part: feature:104337-104681:-1:exon
subclass of: SO_0000010

position:104337:-1
position: 104337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104681:-1
position: 104681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104337-104681:-1:exon

CCS41_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: gspS
locus tag: CCS41_RS00505
old locus tag: CCS41_00510
inference: COORDINATES: protein motif:HMM:TIGR01004.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system pilot lipoprotein GspS
translation: MNCFLCKASFTISILLLLVSCQYPIKTKIHSLNPQIQINQLSALIASGIYIKKNCNRLDIPDDTILIQTALHLAQRRHWDTQVVEYQKLTDTSQARYQRIAPRQYNTRKKMRTA
SIO_010081: CCS41_RS00505
subclass of: SO_0000673
so part of: CCS41_RS00505
location: complement(104337..104681)
location: region:104337-104681:-1
so has part: feature:104337-104681:-1:exon

WP_083429574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104337-104681:-1:exon

CCS41_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00510
old locus tag: CCS41_00515
so part of: sequence
location: 104888..105826
location: region:104888-105826:1
so has part: feature:104888-105826:1:exon
subclass of: SO_0000010

position:104888:1
position: 104888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105826:1
position: 105826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104888-105826:1:exon

CCS41_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00510
old locus tag: CCS41_00515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012304016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter substrate-binding protein
translation: MLIHYRKPYLPIIRQTFFYGFTSLILLLFFLLTTRVANAENKFKVITTFTIIQDMAQNVAGDAAVVESITKPGAEIHGYQPTPRDIVKAQSADLILWNGMKLERWFEPFFENIKQVPSAVVTAGIDPLPIREGSYRENPNPHAWMSAFNALIYIENIRKALVEHDPTHAETYNRNAKIYATKIAALDAPLRARLSRIPEEQRWLVTSEGAFSYLAKDYKFEEIYLWPINAEEQGTPQQVRKVIDAVRAHNIPVVFSESTISDKPAKQVSKETGAQYGGVLYVDSLSNEKGVVPTYIDLLNTTVETIAKGFGQ
SIO_010081: CCS41_RS00510
subclass of: SO_0000673
so part of: CCS41_RS00510
location: 104888..105826
location: region:104888-105826:1
so has part: feature:104888-105826:1:exon

WP_072549870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104888-105826:1:exon

CCS41_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00515
old locus tag: CCS41_00520
so part of: sequence
location: 105823..106713
location: region:105823-106713:1
so has part: feature:105823-106713:1:exon
subclass of: SO_0000010

position:105823:1
position: 105823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106713:1
position: 106713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105823-106713:1:exon

CCS41_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00515
old locus tag: CCS41_00520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704405.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: manganese/iron ABC transporter ATP-binding protein
translation: MSNEAFIRPKLVVDDVSVTYNNGHTAIHNASFTLNGGTICALVGVNGSGKSTLFKSIMGLVRPTTGMVTLNNRPIREALKHNTIAYVPQTEEVDWNFPVLIEDVVMMGRYGKMNFLRIPNSRDHAIVAQAIERVDLSALRCRQIGELSGGQKKRVFLARALAQQGSVLLLDEPFTGVDVKTENAIIDLLRTLRDEGHLILVSTHNLGSVPEFCDHVILINQRVLAAGSTGTTFTQKNLEMTFGGVLRHINLSGSALHDDNDARSITVITDDERPAVFYGHSKNDPPTQSQKKRDHT
SIO_010081: CCS41_RS00515
subclass of: SO_0000673
so part of: CCS41_RS00515
location: 105823..106713
location: region:105823-106713:1
so has part: feature:105823-106713:1:exon

WP_072549871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105823-106713:1:exon

CCS41_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: yfeC
locus tag: CCS41_RS00520
old locus tag: CCS41_00525
so part of: sequence
location: 106713..107579
location: region:106713-107579:1
so has part: feature:106713-107579:1:exon
subclass of: SO_0000010

position:107579:1
position: 107579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106713-107579:1:exon

CCS41_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: yfeC
locus tag: CCS41_RS00520
old locus tag: CCS41_00525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704404.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron/manganese ABC transporter permease subunit YfeC
translation: MLELLLQPFNYNYMVKAIWVSMIVGGVCAFLSAYLMLKGWSLMGDALSHSVVPGVAGAYVLGLPYAAGAFFTGMLAALAMTLVRHITRLREDAIIGFIFSTFFAVGLLIVSLNPTSVNVQSIILGNILGIADADVLQVEIITLVSFIILCLKWKDLLVVFFDENHALSLGLSPLRLKLLFFTLLSACTVAALQTVGAILVIAMVVTPGATAYLLTDRFSRLLIIAIIIGAFTSAFGAYLSFYLDGATGGVIVTLQTLLFLLAFFFAPKHGLLSKRYCTKQPFITQGDS
SIO_010081: CCS41_RS00520
subclass of: SO_0000673
so part of: CCS41_RS00520
location: 106713..107579
location: region:106713-107579:1
so has part: feature:106713-107579:1:exon

WP_072549872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106713-107579:1:exon

CCS41_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00525
old locus tag: CCS41_00530
so part of: sequence
location: 107579..108388
location: region:107579-108388:1
so has part: feature:107579-108388:1:exon
subclass of: SO_0000010

position:108388:1
position: 108388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107579-108388:1:exon

CCS41_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00525
old locus tag: CCS41_00530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704403.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter permease
translation: MHTLLGFISEPLSYPFMQRAMLTAIVTGVVCAVLSCYLVLKGWSLMGDAISHAVLPGIVLAFLLGIPLAIGAFFSGIFCAVATGYLKDNSRVKEDTVMGIVFSGMFALGIVLFSQIDTDQHLSHILFGNILGITLTEFKQTLWIACFTFLLVLLKRKDFMVYCFDPNYAKVIGLPVKLLHYGLLCLLALTIVASLQAVGVILVIAMLIAPGIIAFMLCHSFDKMLMIAILVSVTSCVLGTLISFYIDGATGPCIIIVQALFFVIALIIS
SIO_010081: CCS41_RS00525
subclass of: SO_0000673
so part of: CCS41_RS00525
location: 107579..108388
location: region:107579-108388:1
so has part: feature:107579-108388:1:exon

WP_072549873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107579-108388:1:exon

CCS41_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00530
old locus tag: CCS41_00535
so part of: sequence
location: complement(108432..108962)
location: region:108432-108962:-1
so has part: feature:108432-108962:-1:exon
subclass of: SO_0000010

position:108432:-1
position: 108432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108962:-1
position: 108962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108432-108962:-1:exon

CCS41_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00530
old locus tag: CCS41_00535
inference: COORDINATES: protein motif:HMM:NF014795.2
GO function: GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine pyrophosphate-binding protein
translation: MINADCFLRVLAQHNVNFYSGVPNPLLSEFCFAVSNYSSEIIHQIACNDKAAIGMAIGSYLATGDIPAVYLKNSGLSNIINPVCSHATPEVYGIPLLIIMAWQSGSNDVEKNDTTDASQDKELTLESLSLLKKLHIPYQILDEYGDDCEKKVASLLSIAHNECRPVALLIKKIFSR
SIO_010081: CCS41_RS00530
subclass of: SO_0000673
so part of: CCS41_RS00530
location: complement(108432..108962)
location: region:108432-108962:-1
so has part: feature:108432-108962:-1:exon

WP_072549874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108432-108962:-1:exon

CCS41_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: putA
locus tag: CCS41_RS00535
old locus tag: CCS41_00540
pseudo: true
so part of: sequence
location: complement(109491..113497)
location: region:109491-113497:-1
so has part: feature:109491-113497:-1:exon
subclass of: SO_0000010

position:109491:-1
position: 109491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113497:-1
position: 113497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109491-113497:-1:exon

CCS41_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: putA
locus tag: CCS41_RS00535
old locus tag: CCS41_00540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704529.1
GO function: GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0004657 - proline dehydrogenase activity [Evidence IEA]
GO process: GO:0006561 - proline biosynthetic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
SIO_010081: CCS41_RS00535
subclass of: SO_0000673
so part of: CCS41_RS00535
location: complement(109491..113497)
location: region:109491-113497:-1
so has part: feature:109491-113497:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109491-113497:-1:exon

CCS41_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: putP
locus tag: CCS41_RS00540
old locus tag: CCS41_00545
so part of: sequence
location: 114153..115637
location: region:114153-115637:1
so has part: feature:114153-115637:1:exon
subclass of: SO_0000010

position:114153:1
position: 114153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115637:1
position: 115637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114153-115637:1:exon

CCS41_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: putP
locus tag: CCS41_RS00540
old locus tag: CCS41_00545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004392689.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005298 - proline:sodium symporter activity [Evidence IEA]
GO process: GO:0015824 - proline transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium/proline symporter PutP
translation: MTTNTPMLVTFSIYIFGMILIGLMAYRATNNFDDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAIFMHGISESWIAIGLIIGAYLNWRLVAGRLRVHTEANNNALTLPDYFTSRFADKSKVLRIISAVVILIFFTIYCASGIVAGARLFESIFDMSYQSALWVGAAATIAYTLIGGFLAVSWTDTVQATLIIFALLLTPVIVILSVGGIDASVMVIEAKNPANIDMFNGLNLVAIISLLGWGLGYFGQPHILARFMAADTHHTIRSARRISMTWMILCLAGTVAIGFFGIAYFEDHPELAGNVSHNGERIFIELAKLLFNPWVAGVVLSAILAAVMSSLSCQLLVCSSAITEDLYKAFFRKTASQKELVWVGRCMVLLVSLIAIALAADPNNRVLGLVSYAWAGFGAAFGPVVLISVVWPRMTRNGALIGMIVGAMTVIIWKHFGWLGLYEIIPGFFLASLSIVVVSLMGTEPCKKITARFHKAEVEFKTV
SIO_010081: CCS41_RS00540
subclass of: SO_0000673
so part of: CCS41_RS00540
location: 114153..115637
location: region:114153-115637:1
so has part: feature:114153-115637:1:exon

WP_072549876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114153-115637:1:exon

CCS41_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00545
old locus tag: CCS41_00550
so part of: sequence
location: 115692..117167
location: region:115692-117167:1
so has part: feature:115692-117167:1:exon
subclass of: SO_0000010

position:115692:1
position: 115692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117167:1
position: 117167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115692-117167:1:exon

CCS41_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00545
old locus tag: CCS41_00550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011192768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M48 family metallopeptidase
translation: MSRQLSKTVITLLLGVLYCWQTPVNANTSDLLPDIGTAAGGTLSINQELDMGDFYARQMRAGVPLINDPLLKQYVNKLGNKLVAHANSVRTPFHFYLVNNNRINAFAFFGGNVVLHSALLRYTANESELASVLAHEISHVTQRHLARAMEQQQSTAPLVWASALGSILLTMANPQAGMAALNSTIAGTQQSTILSFTQLNEQEADRIGIQVLQRAGFDPQAMPNFLRKLADQSRYATKPPEMLLTHPLPDSRLSDVRNRANQMPAHPVASSQDYLLAKVRLLGMYAAEGDNLQTHLLDTLSAGTTEEQLAARYGQAILFYQAKKYDKARNTLQPLLTQQPNNIWFLDLITDIDLKQHKNALAITPLQQAITRENINPENNEAVLQLNLANAYLEDKQLTVASKLLYGYTFSHPDDLNGWELLAQVTAAQRLRDEVLAARAESLALQGHLSQAIDLLSDASTLVKLGSLKQARYDARIDQLRQLNQRFRQYL
SIO_010081: CCS41_RS00545
subclass of: SO_0000673
so part of: CCS41_RS00545
location: 115692..117167
location: region:115692-117167:1
so has part: feature:115692-117167:1:exon

WP_072549877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115692-117167:1:exon

CCS41_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00550
old locus tag: CCS41_00555
so part of: sequence
location: 117532..117948
location: region:117532-117948:1
so has part: feature:117532-117948:1:exon
subclass of: SO_0000010

position:117532:1
position: 117532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117948:1
position: 117948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117532-117948:1:exon

CCS41_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00550
old locus tag: CCS41_00555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNSIPLAQFRRIVWSPTGSHITIKTDANGNKDLQVSRPTVGKKVVDLLTHLPGSDKLSYVKNFKEKKIAKNIEANKAFDDALTAEYGPKYVEAYSKHGNPEIPLTPRAVAITMFLAKQGNEQQKSLSPWSSNGYQLG
SIO_010081: CCS41_RS00550
subclass of: SO_0000673
so part of: CCS41_RS00550
location: 117532..117948
location: region:117532-117948:1
so has part: feature:117532-117948:1:exon

WP_072549878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117532-117948:1:exon

CCS41_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: arsC
locus tag: CCS41_RS00555
old locus tag: CCS41_00560
so part of: sequence
location: 118117..118473
location: region:118117-118473:1
so has part: feature:118117-118473:1:exon
subclass of: SO_0000010

position:118117:1
position: 118117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118473:1
position: 118473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118117-118473:1:exon

CCS41_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: arsC
locus tag: CCS41_RS00555
old locus tag: CCS41_00560
EC number: 1.20.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004391285.1
GO function: GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
note: This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenate reductase (glutaredoxin)
translation: MKNVTIYHNPHCSKSREALSLLEQQGIKVDTVLYMTAPLSVATLRELLRQLGFSDARQLMRTKEAAYQTLQLANPELSQEQLSLAMTEHPELIERPIVVYQGQARVGRPLERINEILH
SIO_010081: CCS41_RS00555
subclass of: SO_0000673
so part of: CCS41_RS00555
location: 118117..118473
location: region:118117-118473:1
so has part: feature:118117-118473:1:exon

WP_072549879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118117-118473:1:exon

CCS41_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: hda
locus tag: CCS41_RS00560
old locus tag: CCS41_00565
so part of: sequence
location: complement(118651..119358)
location: region:118651-119358:-1
so has part: feature:118651-119358:-1:exon
subclass of: SO_0000010

position:118651:-1
position: 118651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119358:-1
position: 119358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118651-119358:-1:exon

CCS41_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: hda
locus tag: CCS41_RS00560
old locus tag: CCS41_00565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002228401.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaA inactivator Hda
translation: MLLNTPAQLSLPLYLPDDETFANFYPGENPSLLAAIQTAIYDPHGSYIYFWSKKGGGRSHLLHAACAEFSQRGEAVGYVSLDKRAYFVADVLDGMEQLALVCIDNIECIAGDPQWEMAIFNLYNRIVESGRTRLLITGDRPPRQLNLQLPDLASRLEWGQIYKLQPLSDDEKLQALQLRAKLRGFELPEDVGRFMLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKNILGL
SIO_010081: CCS41_RS00560
subclass of: SO_0000673
so part of: CCS41_RS00560
location: complement(118651..119358)
location: region:118651-119358:-1
so has part: feature:118651-119358:-1:exon

WP_072549880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118651-119358:-1:exon

CCS41_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: purM
locus tag: CCS41_RS00565
old locus tag: CCS41_00570
pseudo: true
so part of: sequence
location: 119528..120570
location: region:119528-120570:1
so has part: feature:119528-120570:1:exon
subclass of: SO_0000010

position:119528:1
position: 119528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120570:1
position: 120570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119528-120570:1:exon

CCS41_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: purM
locus tag: CCS41_RS00565
old locus tag: CCS41_00570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004876822.1
GO function: GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phosphoribosylformylglycinamidine cyclo-ligase
SIO_010081: CCS41_RS00565
subclass of: SO_0000673
so part of: CCS41_RS00565
location: 119528..120570
location: region:119528-120570:1
so has part: feature:119528-120570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119528-120570:1:exon

CCS41_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: purN
locus tag: CCS41_RS00570
old locus tag: CCS41_00575
pseudo: true
so part of: sequence
location: 120587..121212
location: region:120587-121212:1
so has part: feature:120587-121212:1:exon
subclass of: SO_0000010

position:120587:1
position: 120587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121212:1
position: 121212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120587-121212:1:exon

CCS41_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: purN
locus tag: CCS41_RS00570
old locus tag: CCS41_00575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014884779.1
GO function: GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phosphoribosylglycinamide formyltransferase
SIO_010081: CCS41_RS00570
subclass of: SO_0000673
so part of: CCS41_RS00570
location: 120587..121212
location: region:120587-121212:1
so has part: feature:120587-121212:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120587-121212:1:exon

CCS41_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00575
old locus tag: CCS41_00580
pseudo: true
so part of: sequence
location: complement(121501..>122205)
location: region:121501-122205:-1
so has part: feature:121501-122205:-1:exon
subclass of: SO_0000010

position:121501:-1
position: 121501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122205:-1
position: 122205
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121501-122205:-1:exon

CCS41_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00575
old locus tag: CCS41_00580
inference: COORDINATES: protein motif:HMM:NF013080.2
GO function: GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sulfatase-like hydrolase/transferase
SIO_010081: CCS41_RS00575
subclass of: SO_0000673
so part of: CCS41_RS00575
location: complement(121501..>122205)
location: region:121501-122205:-1
so has part: feature:121501-122205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121501-122205:-1:exon

CCS41_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00580
old locus tag: CCS41_00585
so part of: sequence
location: complement(122226..122522)
location: region:122226-122522:-1
so has part: feature:122226-122522:-1:exon
subclass of: SO_0000010

position:122226:-1
position: 122226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122522:-1
position: 122522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122226-122522:-1:exon

CCS41_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00580
old locus tag: CCS41_00585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTINSNGSTLFDYLQQLGYQTLGVGYPKCWGMDDVDRVWSDHQPFNWYDDSAQMLAAADKLIANKEQPFALYFWNMCSHLSYVDGIKARGNTVLNVGA
SIO_010081: CCS41_RS00580
subclass of: SO_0000673
so part of: CCS41_RS00580
location: complement(122226..122522)
location: region:122226-122522:-1
so has part: feature:122226-122522:-1:exon

WP_119797019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122226-122522:-1:exon

CCS41_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00585
old locus tag: CCS41_00590
so part of: sequence
location: complement(122538..122735)
location: region:122538-122735:-1
so has part: feature:122538-122735:-1:exon
subclass of: SO_0000010

position:122538:-1
position: 122538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122735:-1
position: 122735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122538-122735:-1:exon

CCS41_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00585
old locus tag: CCS41_00590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKNLVFIHLESLNQAIFGNRHWFPCLNNIYNRSLRLNNFISSATSSNMALSDLIYGDDNVLEHN
SIO_010081: CCS41_RS00585
subclass of: SO_0000673
so part of: CCS41_RS00585
location: complement(122538..122735)
location: region:122538-122735:-1
so has part: feature:122538-122735:-1:exon

WP_072549883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122538-122735:-1:exon

CCS41_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00590
old locus tag: CCS41_00595
so part of: sequence
location: complement(122898..123305)
location: region:122898-123305:-1
so has part: feature:122898-123305:-1:exon
subclass of: SO_0000010

position:122898:-1
position: 122898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123305:-1
position: 123305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122898-123305:-1:exon

CCS41_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00590
old locus tag: CCS41_00595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016233863.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylyltransferase/cytidyltransferase family protein
translation: MKKVITFGTFDVFHIGHLFLLKRAKQLGSQLIVGISSDTLNLKKKNKHPIYCQDERLAIIRSLKCVDEVFIEESLEMKRNYLINNKADILVMGDDWTGKFDEFNDICRVIYLERTPSISTTSIIEVIKMKKISFL
SIO_010081: CCS41_RS00590
subclass of: SO_0000673
so part of: CCS41_RS00590
location: complement(122898..123305)
location: region:122898-123305:-1
so has part: feature:122898-123305:-1:exon

WP_072549884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122898-123305:-1:exon

CCS41_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00595
old locus tag: CCS41_00600
so part of: sequence
location: complement(123325..124458)
location: region:123325-124458:-1
so has part: feature:123325-124458:-1:exon
subclass of: SO_0000010

position:123325:-1
position: 123325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124458:-1
position: 124458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123325-124458:-1:exon

CCS41_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00595
old locus tag: CCS41_00600
inference: COORDINATES: protein motif:HMM:NF016357.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0047355 - CDP-glycerol glycerophosphotransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-glycerol glycerophosphotransferase family protein
translation: MNLEQTKSEKLIKVGFFMETTFHFYVYENIIFHLQQQSIACCLVINNMMDEPKLINDMLEFFRNTKLENLSIELLTSLRESKSKLSVMVSPYFSVGLQSTADYHVRAMYGLAKEGWNHAWWNIFYDIILCYGDYTKERLNVADNCLVVGNPKFGKWYFPERFKNIEGMLKIDNKKPVLLYAPTYGKLSSLDEWGKKLSHLQNFYNVIIKLHHGTTFRDTEKAQYKLAKSFFKNIITQSDITFELLKFCDYVLTDNSGFIFDSIYAGKRTILLTSAKINNIISLKEDYSNQQSAEFKMRDYLPVVENIESLRHCLAEEYDWSRNDKTIAEIRHHYCDPWQDGQAGYRAANSIINLIHNKKKIRNDIATNLRTVIFEKR
SIO_010081: CCS41_RS00595
subclass of: SO_0000673
so part of: CCS41_RS00595
location: complement(123325..124458)
location: region:123325-124458:-1
so has part: feature:123325-124458:-1:exon

WP_072549885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123325-124458:-1:exon

CCS41_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00600
old locus tag: CCS41_00605
so part of: sequence
location: complement(124574..125272)
location: region:124574-125272:-1
so has part: feature:124574-125272:-1:exon
subclass of: SO_0000010

position:124574:-1
position: 124574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125272:-1
position: 125272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124574-125272:-1:exon

CCS41_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00600
old locus tag: CCS41_00605
inference: COORDINATES: protein motif:HMM:NF012695.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NTP transferase domain-containing protein
translation: MNAIILAAGLGSRFGYITKNNHKALLPIGGTPNIERTIKYLHEFGVTEIHIVTGHMSHLFEVLKNKYHCNLIYNNRYNEYNNIYSLYCAQKYFTDTLVIDADVVLLENIFLISDHSHYYVIQRKKSKNKEWVVCTTDEGIVDKILVTNKYKPSLLGVSYWIKEDCQLIKQKLLCYLQDEKHLINQKLYWDHIPISILQTLKVKAFLIHKTAAAEMDNMDNYHRICTQLASVN
SIO_010081: CCS41_RS00600
subclass of: SO_0000673
so part of: CCS41_RS00600
location: complement(124574..125272)
location: region:124574-125272:-1
so has part: feature:124574-125272:-1:exon

WP_072549886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124574-125272:-1:exon

CCS41_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00605
old locus tag: CCS41_00610
so part of: sequence
location: complement(125269..126123)
location: region:125269-126123:-1
so has part: feature:125269-126123:-1:exon
subclass of: SO_0000010

position:125269:-1
position: 125269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126123:-1
position: 126123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125269-126123:-1:exon

CCS41_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00605
old locus tag: CCS41_00610
inference: COORDINATES: protein motif:HMM:NF013088.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MDKNLKTILVAPIILAFANDFISSGYMLFHLIRKKYSIKKVLLGRNTLIIVAAALLGGPIGMSCYLIAIQYIGVGYAAAISASYPALGALMAFVFIKDKLSKMGVCGILLSVIATMLLGYSASTNSSFCWIGFTFALVCALSWGLEVIISSYGMKKSIPPYFAYFIRQVSASLGYLTLFVMIIPLDNIKECYAMTSKIMPHIFMISLITTVSYLYYYRAINIIGPVRAMGLNITYAVWAILLGWFLLSNQINFQLIILCCFIILGSFLTIISPEKSSKLLRYNK
SIO_010081: CCS41_RS00605
subclass of: SO_0000673
so part of: CCS41_RS00605
location: complement(125269..126123)
location: region:125269-126123:-1
so has part: feature:125269-126123:-1:exon

WP_162859939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125269-126123:-1:exon

CCS41_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00610
old locus tag: CCS41_00615
so part of: sequence
location: complement(126203..127093)
location: region:126203-127093:-1
so has part: feature:126203-127093:-1:exon
subclass of: SO_0000010

position:126203:-1
position: 126203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127093:-1
position: 127093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126203-127093:-1:exon

CCS41_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00610
old locus tag: CCS41_00615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856975.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: choline kinase family protein
translation: MNDKNINDLVIKILNLSKKNKIIMTPIGGMTNSNYLLTIDDVKMVLRLPGVATECFINRGYEKNNSELASLIGINAKTIYFDSATGIKITVYIPDAEVLNPQIVRQQDNIKEISLCFRKLHQSDIKFGNSFNVFSEYEKYKHILDNHYSYLDFFCQKDIFYHFNVIQEILQELGQDRCPCHNDLVAENIIRSNNKIYLIDWEYSGMNDPMWDLASHFLECQFTPNEENIFLMSYFEGGIPDKAKQKILLFKFTQDILWAMWTIIKEENGDNFGNYGVNRLRNAYQLMCQYKEQYDK
SIO_010081: CCS41_RS00610
subclass of: SO_0000673
so part of: CCS41_RS00610
location: complement(126203..127093)
location: region:126203-127093:-1
so has part: feature:126203-127093:-1:exon

WP_072549887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126203-127093:-1:exon

CCS41_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: speG
locus tag: CCS41_RS00615
old locus tag: CCS41_00620
so part of: sequence
location: 127469..128005
location: region:127469-128005:1
so has part: feature:127469-128005:1:exon
subclass of: SO_0000010

position:127469:1
position: 127469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128005:1
position: 128005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127469-128005:1:exon

CCS41_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: speG
locus tag: CCS41_RS00615
old locus tag: CCS41_00620
EC number: 2.3.1.57
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015673348.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spermidine N1-acetyltransferase
translation: MSSTSSIKLRPLERDDLPFVHQLDNNANVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFIISSEGGRVGLVELAEINYIHRRAEFQIIIDPAHQGKGFASRAAILAMEYGFSVLNLYKLYLIVDKENNKAIHIYSKLGFEKEGELKKEFFINGEYRTVIRMCIFQREYFDKYKLSTK
SIO_010081: CCS41_RS00615
subclass of: SO_0000673
so part of: CCS41_RS00615
location: 127469..128005
location: region:127469-128005:1
so has part: feature:127469-128005:1:exon

WP_072549888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127469-128005:1:exon

CCS41_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: mdh
locus tag: CCS41_RS00620
old locus tag: CCS41_00625
so part of: sequence
location: complement(128227..129189)
location: region:128227-129189:-1
so has part: feature:128227-129189:-1:exon
subclass of: SO_0000010

position:128227:-1
position: 128227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129189:-1
position: 129189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128227-129189:-1:exon

CCS41_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: mdh
locus tag: CCS41_RS00620
old locus tag: CCS41_00625
EC number: 1.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:NP_709033.2
GO function: GO:0030060 - L-malate dehydrogenase activity [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malate dehydrogenase
translation: MKVAVLGAAGGIGQALALLLKNQLPADSTLSLYDVAPITPGVAADLSHIPTAVEVEGFAGEDATPALHGADVVLIAAGVARKPGLDRNDLFKFNASIVRDLVAKIAKICPEALIAIITNPVNSTVAIAAEVLKKAGVYDKNKLFGITTLDSIRSNTFVAKLKNKQPQDITVPVIGGHSGTTILPLLSQIPGISFTEKEVTDLTKRIQDAGTEVVKAKAGGGSATLSMGEAAARFALSLVRALQGESGIVECAYVDAVENDEKYKYAPFFAQPVLLDKDGITERKGLGVLSPYEQEALQKMLKVLNEDIASGKDFVNLPSL
SIO_010081: CCS41_RS00620
subclass of: SO_0000673
so part of: CCS41_RS00620
location: complement(128227..129189)
location: region:128227-129189:-1
so has part: feature:128227-129189:-1:exon

WP_072549889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128227-129189:-1:exon

CCS41_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: argR
locus tag: CCS41_RS00625
old locus tag: CCS41_00630
so part of: sequence
location: 129434..129895
location: region:129434-129895:1
so has part: feature:129434-129895:1:exon
subclass of: SO_0000010

position:129434:1
position: 129434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129895:1
position: 129895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129434-129895:1:exon

CCS41_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: argR
locus tag: CCS41_RS00625
old locus tag: CCS41_00630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator ArgR
translation: MDNLADPQDLIKKFKALLKEEKFSSQGEIALALQSAGFESINQSKVSRMLTKFGAIRVRNAKMETVYCLPAERSVPTISSPLKNLVLDINHNDSLVVIRTSPASAQLIARLLDSLGSAEGILGSIAGDDTIFTTPRQNVSVETLYKSILKLLG
SIO_010081: CCS41_RS00625
subclass of: SO_0000673
so part of: CCS41_RS00625
location: 129434..129895
location: region:129434-129895:1
so has part: feature:129434-129895:1:exon

WP_072549890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129434-129895:1:exon

CCS41_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: mpl
locus tag: CCS41_RS00630
old locus tag: CCS41_00635
pseudo: true
so part of: sequence
location: complement(129910..131284)
location: region:129910-131284:-1
so has part: feature:129910-131284:-1:exon
subclass of: SO_0000010

position:129910:-1
position: 129910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131284:-1
position: 131284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129910-131284:-1:exon

CCS41_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: mpl
locus tag: CCS41_RS00630
old locus tag: CCS41_00635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019843313.1
GO function: GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
SIO_010081: CCS41_RS00630
subclass of: SO_0000673
so part of: CCS41_RS00630
location: complement(129910..131284)
location: region:129910-131284:-1
so has part: feature:129910-131284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129910-131284:-1:exon

CCS41_RS15875
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: fbp
locus tag: CCS41_RS15875
old locus tag: CCS41_00640
pseudo: true
so part of: sequence
location: 131635..>132621
location: region:131635-132621:1
so has part: feature:131635-132621:1:exon
subclass of: SO_0000010

position:131635:1
position: 131635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132621:1
position: 132621
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131635-132621:1:exon

CCS41_RS15875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: fbp
locus tag: CCS41_RS15875
old locus tag: CCS41_00640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004875434.1
GO function: GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: class 1 fructose-bisphosphatase
SIO_010081: CCS41_RS15875
subclass of: SO_0000673
so part of: CCS41_RS15875
location: 131635..>132621
location: region:131635-132621:1
so has part: feature:131635-132621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131635-132621:1:exon

CCS41_RS15880
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: ppa
locus tag: CCS41_RS15880
so part of: sequence
location: 132661..133197
location: region:132661-133197:1
so has part: feature:132661-133197:1:exon
subclass of: SO_0000010

position:132661:1
position: 132661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133197:1
position: 133197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132661-133197:1:exon

CCS41_RS15880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: ppa
locus tag: CCS41_RS15880
EC number: 3.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1
GO function: GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO process: GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic diphosphatase
translation: MSLKEVPAGKSLPEDIYVVIEIPANADPIKYEVDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGMLKMSDESGEDAKLVAVPHTKLSTEYDRIKDVEDLPGLLKSQIIHFFKHYKDLEAGKWVKIEGWQDATAARAEICTSYERYKLDKK
SIO_010081: CCS41_RS15880
subclass of: SO_0000673
so part of: CCS41_RS15880
location: 132661..133197
location: region:132661-133197:1
so has part: feature:132661-133197:1:exon

WP_174224017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132661-133197:1:exon

CCS41_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00640
old locus tag: CCS41_00645
so part of: sequence
location: complement(133279..133623)
location: region:133279-133623:-1
so has part: feature:133279-133623:-1:exon
subclass of: SO_0000010

position:133279:-1
position: 133279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133623:-1
position: 133623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133279-133623:-1:exon

CCS41_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00640
old locus tag: CCS41_00645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706522.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gamma-glutamylcyclotransferase
translation: MKIIVYGSLRRNQGNSRWLTAAQLLAECNLDGYEMYYLDHGPAVVAGKGQVRCEIYHIHSSTLIELDEIKNRNKIYQRELIQTPYGKAWIYLYRLSVTGLTRIDSGDWLKRHPI
SIO_010081: CCS41_RS00640
subclass of: SO_0000673
so part of: CCS41_RS00640
location: complement(133279..133623)
location: region:133279-133623:-1
so has part: feature:133279-133623:-1:exon

WP_072549892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133279-133623:-1:exon

CCS41_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00645
old locus tag: CCS41_00650
pseudo: true
so part of: sequence
location: complement(133626..137392)
location: region:133626-137392:-1
so has part: feature:133626-137392:-1:exon
subclass of: SO_0000010

position:133626:-1
position: 133626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137392:-1
position: 137392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133626-137392:-1:exon

CCS41_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00645
old locus tag: CCS41_00650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210167.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: translocation/assembly module TamB
SIO_010081: CCS41_RS00645
subclass of: SO_0000673
so part of: CCS41_RS00645
location: complement(133626..137392)
location: region:133626-137392:-1
so has part: feature:133626-137392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133626-137392:-1:exon

CCS41_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00650
old locus tag: CCS41_00655
so part of: sequence
location: complement(137389..139116)
location: region:137389-139116:-1
so has part: feature:137389-139116:-1:exon
subclass of: SO_0000010

position:137389:-1
position: 137389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139116:-1
position: 139116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137389-139116:-1:exon

CCS41_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00650
old locus tag: CCS41_00655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011191624.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autotransporter assembly complex family protein
translation: MPRYPILCFLCVMLTTPFVHATIGLQINGLSGELEKNVQASLSTITADEISFDGRFQARVQAAIRQGLRALGYYDPTINFDLQQEPKRSTLVVNVVAGTPVRLAGVDIRLRGMAKDDPAYQALVSKDTPKIESILNHGEFDDFTRSLSALALRKGYFDADMIKKQLGVAQQRHQAFWDIDFDSGQRYRFGHLLFQGAQIREDYLQNLVPFHEGDYYSSDDLAELNRRLAATNWFNSAVVSPNFTDANTSKILPLEAIVTPKTKNTVELGGGYATDIGPRVKASWRKPWLNSRGHSLTTSANISVPGQSLDFSYRIPLLKNPLEHYYLLQSGFKRINQNDTKSDISTLNVARFWNLSSGWQRAVNLRWSLEHYTQGQITHTPMLLYPGVSINRIRQRGGAMPTWGDSQRYSLDVSNRSWGSDLNFGVIQAQHVWIRTLGEKNRFVLRGNLGWIETNNFDLMPSSLRFFAGGDRSIRGYKYNGISPRDSKGKLTGAAKLATTSVEYQYNVTDRWWGAVFVDAGEAVNDIHRSDFKTGAGVGVRWASPIGPVRFDIALPIGDKETQRMQFYISLGPEL
SIO_010081: CCS41_RS00650
subclass of: SO_0000673
so part of: CCS41_RS00650
location: complement(137389..139116)
location: region:137389-139116:-1
so has part: feature:137389-139116:-1:exon

WP_072549894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137389-139116:-1:exon

CCS41_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00655
old locus tag: CCS41_00660
pseudo: true
so part of: sequence
location: 139412..>140077
location: region:139412-140077:1
so has part: feature:139412-140077:1:exon
subclass of: SO_0000010

position:139412:1
position: 139412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140077:1
position: 140077
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139412-140077:1:exon

CCS41_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00655
old locus tag: CCS41_00660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012230150.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hemolysin family protein
SIO_010081: CCS41_RS00655
subclass of: SO_0000673
so part of: CCS41_RS00655
location: 139412..>140077
location: region:139412-140077:1
so has part: feature:139412-140077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139412-140077:1:exon

CCS41_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: tnpA
locus tag: CCS41_RS00660
old locus tag: CCS41_00665
so part of: sequence
location: complement(140164..140595)
location: region:140164-140595:-1
so has part: feature:140164-140595:-1:exon
subclass of: SO_0000010

position:140164:-1
position: 140164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140595:-1
position: 140595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140164-140595:-1:exon

CCS41_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: tnpA
locus tag: CCS41_RS00660
old locus tag: CCS41_00665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011236098.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MKDYQSLSHTKWDCKYHIVFIPKGRKKTIFGEIRKHLGEMFHELASQKECKIIEGHLMIDHIHICISIPPKYSVSYVMGYLKGKSAISIVRRFMGKVRNYSGENFWARGYFVSTVGLNEELIRAYIRYQEKQDNHYEQLKLRM
SIO_010081: CCS41_RS00660
subclass of: SO_0000673
so part of: CCS41_RS00660
location: complement(140164..140595)
location: region:140164-140595:-1
so has part: feature:140164-140595:-1:exon

WP_119797021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140164-140595:-1:exon

CCS41_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00665
old locus tag: CCS41_00670
pseudo: true
so part of: sequence
location: <140606..141316
location: region:140606-141316:1
so has part: feature:140606-141316:1:exon
subclass of: SO_0000010

position:140606:1
position: 140606
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:141316:1
position: 141316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140606-141316:1:exon

CCS41_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00665
old locus tag: CCS41_00670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012230150.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hemolysin family protein
SIO_010081: CCS41_RS00665
subclass of: SO_0000673
so part of: CCS41_RS00665
location: <140606..141316
location: region:140606-141316:1
so has part: feature:140606-141316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140606-141316:1:exon

CCS41_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00670
old locus tag: CCS41_00675
so part of: sequence
location: complement(141390..141599)
location: region:141390-141599:-1
so has part: feature:141390-141599:-1:exon
subclass of: SO_0000010

position:141390:-1
position: 141390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141599:-1
position: 141599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141390-141599:-1:exon

CCS41_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00670
old locus tag: CCS41_00675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017801078.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1107 family protein
translation: MRIFQRYHPMRIAMYVKTLFRGRLYIRNMGVFEFDRGKILRPNKVLDKRYFEVMSEVNRQVLRLQTEIS
SIO_010081: CCS41_RS00670
subclass of: SO_0000673
so part of: CCS41_RS00670
location: complement(141390..141599)
location: region:141390-141599:-1
so has part: feature:141390-141599:-1:exon

WP_072549896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141390-141599:-1:exon

CCS41_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00675
old locus tag: CCS41_00680
so part of: sequence
location: 141810..141886
location: region:141810-141886:1
so has part: feature:141810-141886:1:exon
subclass of: SO_0000663

position:141810:1
position: 141810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141886:1
position: 141886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141810-141886:1:exon

CCS41_RS00675
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS00675
old locus tag: CCS41_00680
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:141844..141846,aa:Ile,seq:cat)
SIO_010081: CCS41_RS00675
subclass of: SO_0000673
so part of: CCS41_RS00675
location: 141810..141886
location: region:141810-141886:1
so has part: feature:141810-141886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141810-141886:1:exon

CCS41_RS15470
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15470
so part of: sequence
location: complement(141970..142113)
location: region:141970-142113:-1
so has part: feature:141970-142113:-1:exon
subclass of: SO_0000010

position:141970:-1
position: 141970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142113:-1
position: 142113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141970-142113:-1:exon

CCS41_RS15470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFLTPGRYIEEKSPLRLQLEKLNDFFTDEEYDLLYCLVYKNVEKKS
SIO_010081: CCS41_RS15470
subclass of: SO_0000673
so part of: CCS41_RS15470
location: complement(141970..142113)
location: region:141970-142113:-1
so has part: feature:141970-142113:-1:exon

WP_162859941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141970-142113:-1:exon

CCS41_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00680
old locus tag: CCS41_00685
pseudo: true
so part of: sequence
location: complement(142294..143873)
location: region:142294-143873:-1
so has part: feature:142294-143873:-1:exon
subclass of: SO_0000010

position:142294:-1
position: 142294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143873:-1
position: 143873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142294-143873:-1:exon

CCS41_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00680
old locus tag: CCS41_00685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704306.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hydantoinase/oxoprolinase family protein
SIO_010081: CCS41_RS00680
subclass of: SO_0000673
so part of: CCS41_RS00680
location: complement(142294..143873)
location: region:142294-143873:-1
so has part: feature:142294-143873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142294-143873:-1:exon

CCS41_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00685
old locus tag: CCS41_00690
so part of: sequence
location: complement(143870..144970)
location: region:143870-144970:-1
so has part: feature:143870-144970:-1:exon
subclass of: SO_0000010

position:143870:-1
position: 143870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144970:-1
position: 144970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143870-144970:-1:exon

CCS41_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00685
old locus tag: CCS41_00690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF917 domain-containing protein
translation: MRLLGEAEINHIALGASILASGGGGDPYIGKIMATRAIKQHGSMKLLDIDELPSDALIVSTGMIGAPSVMIEKIPNGDESIEACRFIERYLGKKISAIYPIEIGGVNSLLPLATAAHLGVPLVDIDAMGRAFPEFHMTTFYLDGINSSPFSLVDSRANTCLVQATDSYATEKLSRAVCVEMGGLAFFAAYPITSGVAKKSGIPGTISFVQRIGEELEKARHEKADIVQTLVKLLQGSVLFNGRATRVDLRVEGGFTCGSAYFDGIEVDKGKEFNLSFQNEYLLAQSGNRLLCSTPDLIILLDKETGIPILAERLRYGARVIALGVPANQKLRTPFGLKITGPKYFNYDVNFTTIEKLAVVNKENLR
SIO_010081: CCS41_RS00685
subclass of: SO_0000673
so part of: CCS41_RS00685
location: complement(143870..144970)
location: region:143870-144970:-1
so has part: feature:143870-144970:-1:exon

WP_072549898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143870-144970:-1:exon

CCS41_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00690
old locus tag: CCS41_00695
so part of: sequence
location: complement(144967..146277)
location: region:144967-146277:-1
so has part: feature:144967-146277:-1:exon
subclass of: SO_0000010

position:144967:-1
position: 144967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146277:-1
position: 146277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144967-146277:-1:exon

CCS41_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00690
old locus tag: CCS41_00695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704072.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytosine permease
translation: MNKNNVLGDDYAFSPVPPTARSNLFSMILIRIGMMTALSQFMLGATLGHTMTFSQALLATFLGSLILEFISLGLGVAGAREGLSTSLLARWCGFGRLGSVLIGVVIAVSLVGWFGVQNAVFAEGLNYVFEGQLGFGWSAVISGMTITGLVAFGFRALSWTAKIAVPLFFVVVGWISLILLQRHNITDLITSMPTGTPLTLGAAATMVAGGYVVASLTTADISRYCQNERHVFWMVTASIIVGEFIVNSIAILIAHALKTDDVVSIMTQTAGWIGLLSVILSAVKINDVNLYSSSLAVANTVEGFTGRKWRHTWLTLALGTIGTTLSIMGILDKFTHFLILLGTIFPPIAGVMLVDYYVLRTSRSLLDAARTGQTLPTSTPLIGWPAICACVAGSAVGWNAKFGIASLNSILVACIVYGVIAKIRASSPHTHTKGLK
SIO_010081: CCS41_RS00690
subclass of: SO_0000673
so part of: CCS41_RS00690
location: complement(144967..146277)
location: region:144967-146277:-1
so has part: feature:144967-146277:-1:exon

WP_119797022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144967-146277:-1:exon

CCS41_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00695
old locus tag: CCS41_00700
so part of: sequence
location: complement(146503..147249)
location: region:146503-147249:-1
so has part: feature:146503-147249:-1:exon
subclass of: SO_0000010

position:146503:-1
position: 146503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147249:-1
position: 147249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146503-147249:-1:exon

CCS41_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00695
old locus tag: CCS41_00700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704309.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MAKTHQENDPVKNTTPQISPQILSLCHSSTDPWGIKDLDSRYLYGNSAYFELLNLPARFDIEGLLDDEIPHPIHQFANDFREQDRQVQQSLKNISALDIHPYGRRKECQPYVFDKYPFYDQNGNCVGTIFHAKKLRFYSPMSCVQGKLPSSLLLSPPSGLFTRKELDVVFYTLQSFSAKRIAKKLNLAHRTIENRLQDIYRKSDVNSSSAFKDFCQAKGFDKYVPVRLLSPSSSIISDVVDYDCGEKE
SIO_010081: CCS41_RS00695
subclass of: SO_0000673
so part of: CCS41_RS00695
location: complement(146503..147249)
location: region:146503-147249:-1
so has part: feature:146503-147249:-1:exon

WP_072549900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146503-147249:-1:exon

CCS41_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00700
old locus tag: CCS41_00705
pseudo: true
so part of: sequence
location: 147716..149004
location: region:147716-149004:1
so has part: feature:147716-149004:1:exon
subclass of: SO_0000010

position:147716:1
position: 147716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149004:1
position: 149004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147716-149004:1:exon

CCS41_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00700
old locus tag: CCS41_00705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012668717.1
GO function: GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: citrate synthase
SIO_010081: CCS41_RS00700
subclass of: SO_0000673
so part of: CCS41_RS00700
location: 147716..149004
location: region:147716-149004:1
so has part: feature:147716-149004:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147716-149004:1:exon

CCS41_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00705
old locus tag: CCS41_00710
so part of: sequence
location: 149293..149607
location: region:149293-149607:1
so has part: feature:149293-149607:1:exon
subclass of: SO_0000010

position:149293:1
position: 149293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149607:1
position: 149607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149293-149607:1:exon

CCS41_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00705
old locus tag: CCS41_00710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BON domain-containing protein
translation: MKLLKIFAILCVTTMLTFAIASCAPTNKSEGTGGYIDDTVITTRVKSALFGTKNFRSTEIKVETFKRRVQLSGFVTSKQAADQAVKIARSVPGVKSVSNKMQVK
SIO_010081: CCS41_RS00705
subclass of: SO_0000673
so part of: CCS41_RS00705
location: 149293..149607
location: region:149293-149607:1
so has part: feature:149293-149607:1:exon

WP_072549902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149293-149607:1:exon

CCS41_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00715
old locus tag: CCS41_00720
so part of: sequence
location: 149988..150743
location: region:149988-150743:1
so has part: feature:149988-150743:1:exon
subclass of: SO_0000010

position:149988:1
position: 149988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150743:1
position: 150743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149988-150743:1:exon

CCS41_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00715
old locus tag: CCS41_00720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012145402.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YciC family protein
translation: MPITANILHRDSFNFARSQLFNILLLALLTALITVILNQVLIPDAEQLKILGTVKNDFGSSKGMGIKEMVQLMTPEQQMVLLKVSAAAAFSTLLGNVLLIGAMLALMTLVSQGHRVNTWQAVGFSLSTLPRLSLLIFICTLFIQFGLALFVVPGIAIALAVSLTPIIITNEKIGIFAAIKSSAKLAFANIRLIAPTMILWFSAKLLLLLLISRVTIFTPIIMDVILSTLNNLLSTLLLVYLFRLHMLLHNG
SIO_010081: CCS41_RS00715
subclass of: SO_0000673
so part of: CCS41_RS00715
location: 149988..150743
location: region:149988-150743:1
so has part: feature:149988-150743:1:exon

WP_072549904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149988-150743:1:exon

CCS41_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00720
old locus tag: CCS41_00725
so part of: sequence
location: 150813..151355
location: region:150813-151355:1
so has part: feature:150813-151355:1:exon
subclass of: SO_0000010

position:150813:1
position: 150813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151355:1
position: 151355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150813-151355:1:exon

CCS41_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00720
old locus tag: CCS41_00725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210640.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septation protein A
translation: MKQLLDFLPLIVFFVFYKAYDIFVASAALVVATSLALIFTWIKYREIDKMTLITSVMVIVFGSLTFAFHSDLFIKWKVTVIYVLFSAALLISQWVLKKPLIQSMLGRGLTLPDIVWSKLNLAWALFFLGCGAINVYVAFWLPQDIWVNFKVFGLTALTVLFTIVSGLYIYRHVPESQKKS
SIO_010081: CCS41_RS00720
subclass of: SO_0000673
so part of: CCS41_RS00720
location: 150813..151355
location: region:150813-151355:1
so has part: feature:150813-151355:1:exon

WP_072549905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150813-151355:1:exon

CCS41_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00725
old locus tag: CCS41_00730
so part of: sequence
location: complement(151476..152225)
location: region:151476-152225:-1
so has part: feature:151476-152225:-1:exon
subclass of: SO_0000010

position:151476:-1
position: 151476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152225:-1
position: 152225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151476-152225:-1:exon

CCS41_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00725
old locus tag: CCS41_00730
inference: COORDINATES: protein motif:HMM:TIGR01352.1
GO function: GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB family protein
translation: MQQIKIFPDHRIIWPAILSTVLHVSLITALLYVSVQDMPIFPDITEVPSAVTRVNISTFAPVPQSLSVTQAVVGKSQSQSLKATIPKMTQAKPLVNDPLVKSARSKVISKNAAAKSVPTASTLKNLTTVSENTTAISKHSATASGNSETVSGDPTTIKPKALSRAKPVYPARAWAAGIEGEVKVRYDVDENGLVINVKVLQATPRNIFEREVKKVMKKWRYESIAFKGYVMVIKFKINGLSMATEVSTR
SIO_010081: CCS41_RS00725
subclass of: SO_0000673
so part of: CCS41_RS00725
location: complement(151476..152225)
location: region:151476-152225:-1
so has part: feature:151476-152225:-1:exon

WP_072549906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151476-152225:-1:exon

CCS41_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: cls
locus tag: CCS41_RS00730
old locus tag: CCS41_00735
so part of: sequence
location: 152566..154026
location: region:152566-154026:1
so has part: feature:152566-154026:1:exon
subclass of: SO_0000010

position:152566:1
position: 152566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154026:1
position: 154026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152566-154026:1:exon

CCS41_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: cls
locus tag: CCS41_RS00730
old locus tag: CCS41_00735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1
GO function: GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO process: GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cardiolipin synthase
translation: MITFYTVISWLSFFCYWLLVAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIVTYFLFGELHLGKRRAERAKSMWPSTANWLKALKDYQHIFATQNSEVAIPLFKLCERRQGISGVKGNQLQLLTHADDTLKALIQDIEQARHNIEMVFYIWQSGGLVDQVVESLIAAASRGVHCRLMLDSAGSRQFFRSSSPMKMRNAGIEVVEALKVNLFRVFLRRMDLRQHRKVVLIDNFIAYTGSMNMVDPRFFKQNAGVGQWIDLMVRMEGPVATTIGVVYACDWEIETGKRILPPPPDVNVMPFEQKSSHIIQVIASGPGFPEELIHQALLTAVYAARRQLIMTTPYFVPSDDLLHAICTAAHRGVDVNIIVPRNNDSMMVRWASRSFFAELLESGVKIYQFEDGLLHSKSVLVDGQLSLVGTANLDMRSLWLNFEITLLVDDAAFGSDLARVQDDYMARSVLLDAEQWAKRSVRYRVTERLFYFFSPLL
SIO_010081: CCS41_RS00730
subclass of: SO_0000673
so part of: CCS41_RS00730
location: 152566..154026
location: region:152566-154026:1
so has part: feature:152566-154026:1:exon

WP_072549907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152566-154026:1:exon

CCS41_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: oppF
locus tag: CCS41_RS00735
old locus tag: CCS41_00740
so part of: sequence
location: complement(154059..155066)
location: region:154059-155066:-1
so has part: feature:154059-155066:-1:exon
subclass of: SO_0000010

position:154059:-1
position: 154059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155066:-1
position: 155066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154059-155066:-1:exon

CCS41_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: oppF
locus tag: CCS41_RS00735
old locus tag: CCS41_00740
EC number: 7.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004945302.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0015833 - peptide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
translation: MKVSIVADKKLLLEITDLQVYFNIKDNTQWFWQPAKTLKAVDGMTLNLYQGETLGIVGESGCGKSTLARAIIGLVKTSGGSVTWLGKNLPSMTATEWRTVRRDIQMIFQDPVASLNPRMTIGEIIAEPLRTYHPQMSRQKMQDNVKAMMLKVGLLSNLINRYPHEFSGGQCQRIGIARALILQPKLVICDEPVSALDVSIQAQVVNLLQKLQQDMGLSLIFISHDLSVVKHISDRVLVMYLGHTVELGSCDQIYHNPQHPYTKALMSAMLIPDPDKERAKKTQLLAGELPSPIDPPSGCVFHTRCPIATAECVKTRPTLAGNFRHAVACLKVKID
SIO_010081: CCS41_RS00735
subclass of: SO_0000673
so part of: CCS41_RS00735
location: complement(154059..155066)
location: region:154059-155066:-1
so has part: feature:154059-155066:-1:exon

WP_240313875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154059-155066:-1:exon

CCS41_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: oppD
locus tag: CCS41_RS00740
old locus tag: CCS41_00745
so part of: sequence
location: complement(155041..156054)
location: region:155041-156054:-1
so has part: feature:155041-156054:-1:exon
subclass of: SO_0000010

position:155041:-1
position: 155041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156054:-1
position: 156054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155041-156054:-1:exon

CCS41_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: oppD
locus tag: CCS41_RS00740
old locus tag: CCS41_00745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012105111.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligopeptide ABC transporter ATP-binding protein OppD
translation: MITTADHSSSTSSVLLKVTDLRVTFSTTDGNVTAVDNLNFDLSSGETLGIVGESGAGKSQTAFALMGLLASNAQVAGSAQFNGRELLNLPEKKLNRMRAKDIAMIFQDPMNSLNPYMRVGKQLTEVLRLHKKISHSEAIEESIRMLDAVKVSEARKRMRMYPHEFSGGMCQRVMIAMALLCNPKLLIADEPTTALDVTVQAQIIALLNDLKHEFNTAMIMITHDLGVVAATCDKVLVMYAGRIMEYGQTRDIFYRPGHPYSIGLLNAVPRLNTKSDSLITIPGDPPNLLHLPKGCPFQPRCQYAMERCSTTIPSLEHFGSGRLRACFKPVEGKYCGR
SIO_010081: CCS41_RS00740
subclass of: SO_0000673
so part of: CCS41_RS00740
location: complement(155041..156054)
location: region:155041-156054:-1
so has part: feature:155041-156054:-1:exon

WP_072549909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155041-156054:-1:exon

CCS41_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: oppC
locus tag: CCS41_RS00745
old locus tag: CCS41_00750
pseudo: true
so part of: sequence
location: complement(156051..156970)
location: region:156051-156970:-1
so has part: feature:156051-156970:-1:exon
subclass of: SO_0000010

position:156051:-1
position: 156051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156970:-1
position: 156970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156051-156970:-1:exon

CCS41_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: oppC
locus tag: CCS41_RS00745
old locus tag: CCS41_00750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004390896.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: oligopeptide ABC transporter permease OppC
SIO_010081: CCS41_RS00745
subclass of: SO_0000673
so part of: CCS41_RS00745
location: complement(156051..156970)
location: region:156051-156970:-1
so has part: feature:156051-156970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156051-156970:-1:exon

CCS41_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: oppB
locus tag: CCS41_RS00750
old locus tag: CCS41_00755
so part of: sequence
location: complement(157012..157932)
location: region:157012-157932:-1
so has part: feature:157012-157932:-1:exon
subclass of: SO_0000010

position:157012:-1
position: 157012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157932:-1
position: 157932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157012-157932:-1:exon

CCS41_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: oppB
locus tag: CCS41_RS00750
old locus tag: CCS41_00755
EC number: 7.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligopeptide ABC transporter permease OppB
translation: MLRFILRRILETIPTLFILITFSFFLMRFAPGSPFTDERHLPPEVMANIEAKYHFNDPIYKQYFSYLLQLAQGDLGPSFKYKDYTVNTLVVSSFPVSAKLGGVAFLFAVICGISAGVVAALKQNTVWDYTVMGLAMTGVVIPSFVVAPLLVLVFAIILQWLPAGGWNGGSPQFIILSMVALSLSYIASIARITRGSMIEVLHANFIRTARAKDIPLRIIVLRHALKPALLPVLSYMAPAFVGIITGSMVIETIFGLPGIGQLFVNGALNRDYSLVLSLTILLGSLTILFNAIVDVLYAAIDPKIRY
SIO_010081: CCS41_RS00750
subclass of: SO_0000673
so part of: CCS41_RS00750
location: complement(157012..157932)
location: region:157012-157932:-1
so has part: feature:157012-157932:-1:exon

WP_119797023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157012-157932:-1:exon

CCS41_RS15475
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15475
so part of: sequence
location: complement(158233..158373)
location: region:158233-158373:-1
so has part: feature:158233-158373:-1:exon
subclass of: SO_0000010

position:158233:-1
position: 158233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158373:-1
position: 158373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158233-158373:-1:exon

CCS41_RS15475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKDKNNVQRKIIALFAYCSGKILFPEHYASADNKSSSYFTFFIVC
SIO_010081: CCS41_RS15475
subclass of: SO_0000673
so part of: CCS41_RS15475
location: complement(158233..158373)
location: region:158233-158373:-1
so has part: feature:158233-158373:-1:exon

WP_162859942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158233-158373:-1:exon

CCS41_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00755
old locus tag: CCS41_00760
so part of: sequence
location: 158667..159077
location: region:158667-159077:1
so has part: feature:158667-159077:1:exon
subclass of: SO_0000010

position:158667:1
position: 158667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159077:1
position: 159077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158667-159077:1:exon

CCS41_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00755
old locus tag: CCS41_00760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001287384.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS family nucleoid-associated regulatory protein
translation: MSELLKTLNNVRTLRAQARECSLETLEEIFEKLSAIVEDRCKEAEEEREKSEERAHKKLEYLKMLAADGIEPAELLQGTASSKDTNKKQRVPRPPKYKYTDEKTGESKTWTGQGRTPAGIKEGLEQGKSLEDYQIK
SIO_010081: CCS41_RS00755
subclass of: SO_0000673
so part of: CCS41_RS00755
location: 158667..159077
location: region:158667-159077:1
so has part: feature:158667-159077:1:exon

WP_072549918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158667-159077:1:exon

CCS41_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00760
old locus tag: CCS41_00765
so part of: sequence
location: complement(159189..160535)
location: region:159189-160535:-1
so has part: feature:159189-160535:-1:exon
subclass of: SO_0000010

position:159189:-1
position: 159189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160535:-1
position: 160535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159189-160535:-1:exon

CCS41_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00760
old locus tag: CCS41_00765
EC number: 1.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004962347.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-glucose/GDP-mannose dehydrogenase family protein
translation: MKVTVFGVGYVGLVQAAVLAEVGHDVFCIDVDAEKIAKLQGGQIDIYEPALAPLVQNNVAAGRLCFSTDEAAGVAHGIIQFIAVGTPPNENGTADLQYVMQVAETIANYMNDRKVVIDKSTVPVGTADKVRTVIETILQQRGQEISFDVVSNPEFLKEGAAVADCRRPERIVIGSDNKEVLELIRELYEPFNRNHDRMILMDIRSAELTKYAANCMLATKISFMNEMANLAELFGADIEKVRQGIGSDSRIGHHFIYSGCGYGGSCFPKDVQALIRTAENNAYQPKLLQAVQAVNNQQKYKLTQFIFQHFGHPLTNKIFALWGLAFKPNTDDMREAPSRIVMETLWKAGAIIHAYDPEAMNEAARIYGKRKDLQLMKTKEAALQGAEALIICTEWQNFRAPDFGMIKNKLRQPVIFDGRNLYDPERLHSQEFIYYAIGRGASVKPLMK
SIO_010081: CCS41_RS00760
subclass of: SO_0000673
so part of: CCS41_RS00760
location: complement(159189..160535)
location: region:159189-160535:-1
so has part: feature:159189-160535:-1:exon

WP_072549912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159189-160535:-1:exon

CCS41_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rssB
locus tag: CCS41_RS00765
old locus tag: CCS41_00770
so part of: sequence
location: complement(160737..161750)
location: region:160737-161750:-1
so has part: feature:160737-161750:-1:exon
subclass of: SO_0000010

position:160737:-1
position: 160737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161750:-1
position: 161750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160737-161750:-1:exon

CCS41_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rssB
locus tag: CCS41_RS00765
old locus tag: CCS41_00770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704059.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two-component system response regulator RssB
translation: MEKPLINKKILIVEDEIVFRSVLAGYLSSLGASIYQAVNGREALRVLDEHALDLILCDLTMSEMGGIEFVECLLAQGIKIPVLIISATDKMTDIAQVLRLGVKDVLLKPIVDLARLREAVLACLYSDLFTSPALERRELDQDWDELRKDPQKAAQLLLQLQPPLQQTMAQCKIRYRQLTAVEQPGLVLDIAALSNNELAFYCLDITKAGNNGVLAALLLRVLFNGVLQEHLAQQKRRLPQMTALLQQLNQLLRRTHLDGQFPLLLGYYHSEYKNLSLISAGLQASINIGKNKIQLDNGMPLGTLNTAYLKQISQDCASWECQVRGGGSGLRLTLSTL
SIO_010081: CCS41_RS00765
subclass of: SO_0000673
so part of: CCS41_RS00765
location: complement(160737..161750)
location: region:160737-161750:-1
so has part: feature:160737-161750:-1:exon

WP_072549913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160737-161750:-1:exon

CCS41_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00770
old locus tag: CCS41_00775
so part of: sequence
location: complement(162177..163052)
location: region:162177-163052:-1
so has part: feature:162177-163052:-1:exon
subclass of: SO_0000010

position:162177:-1
position: 162177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163052:-1
position: 163052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162177-163052:-1:exon

CCS41_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00770
old locus tag: CCS41_00775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704057.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MFFSIFSIKLEAFMKVAKYGSISQAAREMNRTTPPVAKGVKDFECSMGKKLFIREKFGMRLTNEGTILYNDLKGLYQEAKEITKKYATDNFTNTVNIYYDWGKSKILSAIFKEAKRNNIEPNILGMNVENATDLPDYDGNIFIIKSEKIICDKFSLIREVQGFAIGVYAKKDIINKSKDVMSLLHDNIWLCNPILYKSKFIKSLKEQVPNHVSKNKITQVDNTACCSEFMHEGNYIFITNSTIDDFDRDATLTFVPFTKEIFSENNLYFYQSKSPSSALNKLIDYVKNVNL
SIO_010081: CCS41_RS00770
subclass of: SO_0000673
so part of: CCS41_RS00770
location: complement(162177..163052)
location: region:162177-163052:-1
so has part: feature:162177-163052:-1:exon

WP_072549914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162177-163052:-1:exon

CCS41_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: xthA
locus tag: CCS41_RS00775
old locus tag: CCS41_00780
so part of: sequence
location: 163779..164585
location: region:163779-164585:1
so has part: feature:163779-164585:1:exon
subclass of: SO_0000010

position:163779:1
position: 163779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164585:1
position: 164585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163779-164585:1:exon

CCS41_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: xthA
locus tag: CCS41_RS00775
old locus tag: CCS41_00780
EC number: 3.1.11.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013317853.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease III
translation: MKFVSFNINGLRARPHQLAAIVTQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQKGHYGVALLTRQPPLAVRRGFPTDADDAQRRIIMVDLQTPRGILTVINGYFPQGENRDHPTKFPAKEKFYGDLQNYLEQYLSDDSQVLIMGDLNISPTEQDIGIGEENRKRWLRSGKCAFLPEERDWLARLQNWGLIDTFRTKYPECNDRFSWFDYRSRGFDENRGLRIDLLLASHPLAEHCIATGIDYQIRGMEKPSDHAPVWSEFAF
SIO_010081: CCS41_RS00775
subclass of: SO_0000673
so part of: CCS41_RS00775
location: 163779..164585
location: region:163779-164585:1
so has part: feature:163779-164585:1:exon

WP_072549915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163779-164585:1:exon

CCS41_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00780
old locus tag: CCS41_00785
so part of: sequence
location: complement(164590..164934)
location: region:164590-164934:-1
so has part: feature:164590-164934:-1:exon
subclass of: SO_0000010

position:164590:-1
position: 164590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164934:-1
position: 164934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164590-164934:-1:exon

CCS41_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00780
old locus tag: CCS41_00785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004945365.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1496 domain-containing protein
translation: MMKALSIEGTIKKLMIKKVALLCFIVCTLLFSSVASAVEGNNVNLVVPLPAELLKNPVTTNSNNSNPCIRCCVYQNQSYTEGAILQIPGGISLQCTRDKNSVRTNPLIWQRLTH
SIO_010081: CCS41_RS00780
subclass of: SO_0000673
so part of: CCS41_RS00780
location: complement(164590..164934)
location: region:164590-164934:-1
so has part: feature:164590-164934:-1:exon

WP_240313784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164590-164934:-1:exon

CCS41_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00785
old locus tag: CCS41_00790
so part of: sequence
location: complement(164935..166857)
location: region:164935-166857:-1
so has part: feature:164935-166857:-1:exon
subclass of: SO_0000010

position:164935:-1
position: 164935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166857:-1
position: 166857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164935-166857:-1:exon

CCS41_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00785
old locus tag: CCS41_00790
EC number: 5.6.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004945367.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase III
translation: MQLFIAEKPSLARAIADILPKPHKRGDGFIACGDHHMVTWCIGHLLEQAPPDAYHSRYVRWLLSDLPIIPEKWQLRPRPEVSKQLNVIKKLLQQADDVVHAGDPDREGQLLVDEVLNYLALTPSMRQNVRRCLINDLNPSAVERAVKQLRYNHEFIPLCVSALARSRADWLYGINMTRAYTLLGRSAGYDRVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIITLAQERFVAFWQPSDACESYQDEEGRLLHKSLAEHVINRITGQPAWVTSYSDKKELETAPLPFSLSTLQIEAAKRFTLSAQQVLDICQRLYETHKLITYPRSDCRYLPKEHFAERHAVFNAIKHHQPTLLPLSVIDDERRNRCWDDKKVDAHHAIIPTSLARKINLTPDESKVYGLVARQYLMQFCPDAQFRKCVIELEIAGGKFIAKARFLIAAGWRTLLGNKERNEEDEGTPLPVVKKGDELLCEKGELVERQTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEATRAGIIELLFKRTFLFKKGRYIHSSLTGRALVHALPAIATGADMTARWEATLTQISEKSCCYQNFMQPLIATLQSLIYQAQQKSSSPVFNGLPDIPVTAIKKEKKRQSTKLRKK
SIO_010081: CCS41_RS00785
subclass of: SO_0000673
so part of: CCS41_RS00785
location: complement(164935..166857)
location: region:164935-166857:-1
so has part: feature:164935-166857:-1:exon

WP_072549916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164935-166857:-1:exon

CCS41_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: sppA
locus tag: CCS41_RS00790
old locus tag: CCS41_00795
so part of: sequence
location: 167074..168903
location: region:167074-168903:1
so has part: feature:167074-168903:1:exon
subclass of: SO_0000010

position:167074:1
position: 167074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168903:1
position: 168903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167074-168903:1:exon

CCS41_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: sppA
locus tag: CCS41_RS00790
old locus tag: CCS41_00795
EC number: 3.4.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019083189.1
GO function: GO:0008233 - peptidase activity [Evidence IEA]
GO process: GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptide peptidase SppA
translation: MRILWRFIAGTVRRTWRLLNFVREFFLNLFFILLILIGIGLYFQFQNKPADPAKGALLVDLSGVVVDKPIVNDKLREWGRELLGSSSTRLQENSLFEVVENIRQAKADDNITGIVLSLNNFVGADQPSLQYMGNALREFRDSGKPIYAIGDSYNQIQYYLASFANKIYLSPQGSVELQGFSSNTLYYKSLLDKLKITTHVFRVGSYKSAVEPMIRDDMSPEAREANSRWIEGLWQNYLTEVASNRNLSKEQLFPNAATDIVSRLQAVGGNLAQYALDHKLVDRLASRSAIEAELTDIFGWDKQNNDFNFISIYNYQTKEKPQQDSQIAVILINGAIVDGLQTPGSVGGDTAAAQIRQARLDPKIEAVILRVNSPGGSVNASEVIRSELVALRAAGKPLVVSMGGMAASGGYWISTPANYIIANPSTLTGSIGIFGVINTVDKSLESIGVHTDGVTTSPLADVATTKALPSEFSQMMQINIEHGYQTFINLVATARHKTPEQVDQIAQGRVWMGSDAKNNDLVDQLGNFDDAVKKAAELAKLDNYELQWFVDQPSLSDMILSQIGVSVQAMLPAPLSAVATVVKDQTDSFNQFNDPQNRYVLCLTCGDIR
SIO_010081: CCS41_RS00790
subclass of: SO_0000673
so part of: CCS41_RS00790
location: 167074..168903
location: region:167074-168903:1
so has part: feature:167074-168903:1:exon

WP_119797024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167074-168903:1:exon

CCS41_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00795
old locus tag: CCS41_00800
so part of: sequence
location: complement(168953..169225)
location: region:168953-169225:-1
so has part: feature:168953-169225:-1:exon
subclass of: SO_0000010

position:168953:-1
position: 168953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169225:-1
position: 169225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168953-169225:-1:exon

CCS41_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00795
old locus tag: CCS41_00800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005162905.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1315 family protein
translation: MELDDLIASITPEIYQRLLQAVELGKWSDGNVLTSTQKENSLQMIMLWQARYNHEAQHMSIGTDGQMVIKSKQELQQQFTHPMLIKLKPQ
SIO_010081: CCS41_RS00795
subclass of: SO_0000673
so part of: CCS41_RS00795
location: complement(168953..169225)
location: region:168953-169225:-1
so has part: feature:168953-169225:-1:exon

WP_072550394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168953-169225:-1:exon

CCS41_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: gapA
locus tag: CCS41_RS00800
old locus tag: CCS41_00805
so part of: sequence
location: 169621..170628
location: region:169621-170628:1
so has part: feature:169621-170628:1:exon
subclass of: SO_0000010

position:169621:1
position: 169621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170628:1
position: 170628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169621-170628:1:exon

CCS41_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: gapA
locus tag: CCS41_RS00800
old locus tag: CCS41_00805
EC number: 1.2.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:NP_310515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glyceraldehyde-3-phosphate dehydrogenase
translation: MTIKVGINGFGRIGRIVFRAAQQRSNIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKNGDLVVNGKTIRVTAEKDPANLKWNEVNVSVVAEATGLFLTDETARKHIAAGAKKVVLTGPSKDDTPMFVMGVNHKTYAGQEIVSNASCTTNCLAPLAKIINDKFGIVEALMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVIPELEGKLTGMAFRVPTANVSVVDLTARLAKSATYREICAAIKAAAEDEDKDGLKGILGYTDDEVVSSDFNGEQLTSVFDAKAGIALNDNFVKLIAWYDNETGYSNKVLDLITYISK
SIO_010081: CCS41_RS00800
subclass of: SO_0000673
so part of: CCS41_RS00800
location: 169621..170628
location: region:169621-170628:1
so has part: feature:169621-170628:1:exon

WP_072550393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169621-170628:1:exon

CCS41_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: dadX
locus tag: CCS41_RS00805
old locus tag: CCS41_00810
so part of: sequence
location: complement(170680..171756)
location: region:170680-171756:-1
so has part: feature:170680-171756:-1:exon
subclass of: SO_0000010

position:170680:-1
position: 170680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171756:-1
position: 171756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170680-171756:-1:exon

CCS41_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: dadX
locus tag: CCS41_RS00805
old locus tag: CCS41_00810
EC number: 5.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011816439.1
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]
GO process: GO:0006522 - alanine metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: catabolic alanine racemase DadX
translation: MPRPISAILNLSALSNNLKVVRHYAPKAKIWSVIKANAYGHGLARVWQSLATTDGFALLDLNDAIFLREQGWQKPILLLEGFFEASDLPLLDRYRLTTTVHNAWQLATLKKAKLETPLDIYLKLNSGMNRLGFSGEAMYKIWQEAKASNNISKITLMSHFANADNTVGIQDQYTFIEESCKGILVERSLANSAAILWHPSTHYDWVRPGIILYGASPNGHVTTLKDTGLRPVMSLHSKLLAVQTLEAGADVGYGNCYHTKTAMRIGIVACGYADGYPRHAPQGTPIIVDGILTHTIGAVSMDMLAVDLTPCPQAGINSKVELWGENLSIDEVAAAANTIGYELMCALAARVPVVSHLD
SIO_010081: CCS41_RS00805
subclass of: SO_0000673
so part of: CCS41_RS00805
location: complement(170680..171756)
location: region:170680-171756:-1
so has part: feature:170680-171756:-1:exon

WP_072550392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170680-171756:-1:exon

CCS41_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: fadR
locus tag: CCS41_RS00810
old locus tag: CCS41_00815
so part of: sequence
location: complement(171835..172524)
location: region:171835-172524:-1
so has part: feature:171835-172524:-1:exon
subclass of: SO_0000010

position:171835:-1
position: 171835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172524:-1
position: 172524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171835-172524:-1:exon

CCS41_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: fadR
locus tag: CCS41_RS00810
old locus tag: CCS41_00815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211688.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0000062 - fatty-acyl-CoA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0019217 - regulation of fatty acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fatty acid metabolism transcriptional regulator FadR
translation: MVIKAQSPAGFAEEYLIESIWKKRFPPDSFLPAERELSELIGVTRTTLREVLQRLARDGWLTIRHGKPTKVNNFWETSSLNILETLARLDNDSTPHLLEHLLTVRTNIASLFVGTAFCKNPDKAQEILATAENVEDHAEAFTTLDCNIFRALAFASGNPIYGLILNGLKGLYSKMGRYYFSNPEARKLATSFYCRLAALCKEKNHEQIIDCLRIYNKNSRAIWQDMQCQ
SIO_010081: CCS41_RS00810
subclass of: SO_0000673
so part of: CCS41_RS00810
location: complement(171835..172524)
location: region:171835-172524:-1
so has part: feature:171835-172524:-1:exon

WP_072550391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171835-172524:-1:exon

CCS41_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: dsbB
locus tag: CCS41_RS00815
old locus tag: CCS41_00820
so part of: sequence
location: 172785..173315
location: region:172785-173315:1
so has part: feature:172785-173315:1:exon
subclass of: SO_0000010

position:172785:1
position: 172785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173315:1
position: 173315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172785-173315:1:exon

CCS41_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: dsbB
locus tag: CCS41_RS00815
old locus tag: CCS41_00820
EC number: 1.8.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016266489.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: disulfide bond formation protein DsbB
translation: MLQFFNRCFKGRSAWFLIGLSGIILELIALYFQHIMLMQPCVMCIYERCVLLGIIVASLIGALFPNSPLRYVAIFLWLYSAGKGIQLTWQHIMQQLFPSPFSRCDFFVDFPTWLPLDKWLPSIFVAQGDCSLQQWQFMSFSMPQWLLAIFSTYLLIGILVLMSQWIKPKRPYLFKR
SIO_010081: CCS41_RS00815
subclass of: SO_0000673
so part of: CCS41_RS00815
location: 172785..173315
location: region:172785-173315:1
so has part: feature:172785-173315:1:exon

WP_072550398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172785-173315:1:exon

CCS41_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00820
old locus tag: CCS41_00825
so part of: sequence
location: complement(173612..174058)
location: region:173612-174058:-1
so has part: feature:173612-174058:-1:exon
subclass of: SO_0000010

position:173612:-1
position: 173612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174058:-1
position: 174058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173612-174058:-1:exon

CCS41_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00820
old locus tag: CCS41_00825
inference: COORDINATES: similar to AA sequence:RefSeq:NP_309703.5
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YcgN family cysteine cluster protein
translation: MSQLPFWQQKTLAEMSDEEWESLCDGCGQCCLNKLIDANTDEIYFTNVACNQLNLKTCQCRHYSRRFEYEKNCIKLTRENLTTLNWLPHTCAYRALAEGHDLPLWHPLLTGSKTAMHGERISVRNIAVHESEVFDWEDHIINKLDRIR
SIO_010081: CCS41_RS00820
subclass of: SO_0000673
so part of: CCS41_RS00820
location: complement(173612..174058)
location: region:173612-174058:-1
so has part: feature:173612-174058:-1:exon

WP_072550390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173612-174058:-1:exon

CCS41_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00825
old locus tag: CCS41_00830
so part of: sequence
location: complement(174089..174478)
location: region:174089-174478:-1
so has part: feature:174089-174478:-1:exon
subclass of: SO_0000010

position:174089:-1
position: 174089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174478:-1
position: 174478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174089-174478:-1:exon

CCS41_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00825
old locus tag: CCS41_00830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRKFLGLLLVSGAAPFTFCLASPDFTYHPPVPEHSQPSPEYLEKRKQLDDLEELQKKAAAEEDAKKEAARIMEEKIQEERLERQEAQRGKKNGIITPVKRKMYVDTIISEHNRFQTSFCVSILQQLLT
SIO_010081: CCS41_RS00825
subclass of: SO_0000673
so part of: CCS41_RS00825
location: complement(174089..174478)
location: region:174089-174478:-1
so has part: feature:174089-174478:-1:exon

WP_119797025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174089-174478:-1:exon

CCS41_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: dnaX
locus tag: CCS41_RS00830
old locus tag: CCS41_00835
so part of: sequence
location: 174690..176558
location: region:174690-176558:1
so has part: feature:174690-176558:1:exon
subclass of: SO_0000010

position:174690:1
position: 174690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176558:1
position: 176558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174690-176558:1:exon

CCS41_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: dnaX
locus tag: CCS41_RS00830
old locus tag: CCS41_00835
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002208605.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MSYQVLARKWRPQTFDAVVGQQHVLTALANGLSLGRIHHAYLLSGTRGVGKTSIARLLAKGLNCEQAITSTPCGQCTHCQEIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYVPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFVLATTDAQKLPVTVLSRCLQFHLKALNVQQICTQLEKILQAEGIISDPHALQLLAKAANGSMRDALSLTDQAIAIGQGKVTTAPVNQMLGTLDGAQPLAIIEALVSADGVQLMAQVEQVASRGVDWENLLIEALTLLHRIAMMQLLPTPFDSPLNDQDTLTEQRLHELAKILPPTDIQLYYQTLLIGRKELSYAPDRRMGVEMTLLRALAFHPQTPISEPQVRPLNTPQKNITVTPPLVSSTINDIDSTNNETRSTPSTITVQLLQAQTQLFQQKKDLSTKKKPSAEKSLPVEKNRTDTKKAYHWQAKTQPIAVKAVTILQTLRNALQNKENPELMEKLTQEAIIRDPWAKELDKLTMPKMVQQLALNTFKQQIAPENICLHLRSAQRHLNSLSTQKTLADALSALYGKQVELEVVEDDNTAQLTPSEWRQAIYAEKLAQARQSIVADNNIQTLRRFFDADLDEESITPI
SIO_010081: CCS41_RS00830
subclass of: SO_0000673
so part of: CCS41_RS00830
location: 174690..176558
location: region:174690-176558:1
so has part: feature:174690-176558:1:exon

WP_072550388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174690-176558:1:exon

CCS41_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00835
old locus tag: CCS41_00840
so part of: sequence
location: 176645..176956
location: region:176645-176956:1
so has part: feature:176645-176956:1:exon
subclass of: SO_0000010

position:176645:1
position: 176645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176956:1
position: 176956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176645-176956:1:exon

CCS41_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00835
old locus tag: CCS41_00840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbaB/EbfC family nucleoid-associated protein
translation: MLNILEQAQKMQDRMQKVQETFAELEVIGESGAGLIKVTLSGTYNCKRVEIDPSLMNDGQQMLEELTAAAYNDAVKRLTALQKKKMASVVNEIPLPPGMQIPF
SIO_010081: CCS41_RS00835
subclass of: SO_0000673
so part of: CCS41_RS00835
location: 176645..176956
location: region:176645-176956:1
so has part: feature:176645-176956:1:exon

WP_072550387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176645-176956:1:exon

CCS41_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: recR
locus tag: CCS41_RS00840
old locus tag: CCS41_00845
so part of: sequence
location: 176956..177561
location: region:176956-177561:1
so has part: feature:176956-177561:1:exon
subclass of: SO_0000010

position:177561:1
position: 177561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176956-177561:1:exon

CCS41_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: recR
locus tag: CCS41_RS00840
old locus tag: CCS41_00845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019081275.1
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination mediator RecR
translation: MSTPLLLGSLMEALRCLPGVGLKSAQRMAFHLLQRDRSGGMRLAQSLTQAMSNIGHCVSCRTFTEEKSCTVCVNPYRQKNGQICVVESPADVHAIEQTGQFSGRYFVLMGRLSPLDGIGPTDIGLDLLASRLASETFSEVILATNPTVEGDATARYIGGICQQYRVPASRIAHGVPVGGELEMVDGTTLSHSLIGRQRLIY
SIO_010081: CCS41_RS00840
subclass of: SO_0000673
so part of: CCS41_RS00840
location: 176956..177561
location: region:176956-177561:1
so has part: feature:176956-177561:1:exon

WP_072550386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176956-177561:1:exon

CCS41_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: htpG
locus tag: CCS41_RS00845
old locus tag: CCS41_00850
so part of: sequence
location: 177906..179891
location: region:177906-179891:1
so has part: feature:177906-179891:1:exon
subclass of: SO_0000010

position:177906:1
position: 177906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179891:1
position: 179891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177906-179891:1:exon

CCS41_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: htpG
locus tag: CCS41_RS00845
old locus tag: CCS41_00850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013649462.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone HtpG
translation: MKNQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSMPELYAGDAVLRVRVSVDKEKRTLTLSDNGIGMSYDEVIDNLGTIAKSGTKNFLASLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEPTDAGVFWESAGEGDYTIATIPKEDRGTEITLHLREGEDEYLDNWKIRSVIKKYSDHIELPVEIENKTKVEPAVETKKDENVDADNESVVDAEASDDTAQDPPVPNETEETVTWEPINKAKALWLRSKSEIKDEEHKEFYKHISHDFNDPLVWSHNRVEGKQDYTSLLYIPKQAPWDLWNREHKHGLKLYVQRVFIMDEAEQFLPNYLRFTRGLVDSNDLPLNVSRELLQDTKITQNLRSALTKRVLKMLTDLAEKDSEKYQQFWQQFGLVLKEGPAEDHANKESMTKLLRFASTHNDSSEQTISLEDYKGRMTAEQDKIYFITADSYTAANSSPHLELFRKKGVEVLLLSDRIDEWMMSHLTEFEGKAFQSVSQVDDSLKKLADEETPEQQAAEKALAPCIERVKTLLGDRVKDVRLTHRLTGTPAIVTTDSNEMGTQMAKLFTAAGQKAPEVKYILELNPEHELVKRVAKTEDESQFAEWVELFFEQALLTERGTLDNPSQFMNRMNKLLLSA
SIO_010081: CCS41_RS00845
subclass of: SO_0000673
so part of: CCS41_RS00845
location: 177906..179891
location: region:177906-179891:1
so has part: feature:177906-179891:1:exon

WP_119797693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177906-179891:1:exon

CCS41_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: adk
locus tag: CCS41_RS00850
old locus tag: CCS41_00855
so part of: sequence
location: 180318..181004
location: region:180318-181004:1
so has part: feature:180318-181004:1:exon
subclass of: SO_0000010

position:180318:1
position: 180318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181004:1
position: 181004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180318-181004:1:exon

CCS41_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: adk
locus tag: CCS41_RS00850
old locus tag: CCS41_00855
EC number: 2.7.4.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010845074.1
GO function: GO:0004017 - adenylate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylate kinase
translation: MRIILLGAPGAGKGTQAQFIMKEYGIAQISTGDMLRAAVRTASELGLQAKKIMDEGKLVTDKLVIALVEERIKQDDCRDGFLLDGFPRTLPQADAMKAAGIKIDYVLEFAVPDKIIIERIAGRRVHAASGRIYHIKFNPPKIKDRDDITGEQLSIRKDDQEETVRKRLIEYHQQTEPLLSYYRQEANEGNTHYFKLDGNREVSEISAELATILGESCDDFLSVLSKCK
SIO_010081: CCS41_RS00850
subclass of: SO_0000673
so part of: CCS41_RS00850
location: 180318..181004
location: region:180318-181004:1
so has part: feature:180318-181004:1:exon

WP_072550385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180318-181004:1:exon

CCS41_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: hemH
locus tag: CCS41_RS00855
old locus tag: CCS41_00860
so part of: sequence
location: 181149..182114
location: region:181149-182114:1
so has part: feature:181149-182114:1:exon
subclass of: SO_0000010

position:181149:1
position: 181149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182114:1
position: 182114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181149-182114:1:exon

CCS41_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: hemH
locus tag: CCS41_RS00855
old locus tag: CCS41_00860
EC number: 4.98.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004703284.1
GO function: GO:0004325 - ferrochelatase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferrochelatase
translation: MMHNKVGVLMVNLGTPDAPTSPAVKNYLAQFLSDRRVIETSPLLWWPLLHAVILPFRASRLAKLYQSIWMEEGSPLLVYSQRQQKALAARRLPDVSVELGMSYGSPCLAKAIKKLLSQNLTKLIILPLYPQYSASTSAAVWDAVADILKRYRCLPSIHFIRDYAEHPAYIDALKQSVERSFKKQGQPDRLIVSFHGIPKRYAKLGDDYPKRCEDTYRALHTALALPENKMIMTYQSRFGCQPWLTPYTDKTLKKLPVQGVKHIQVICPGFAADCLETLEEIKQQNREIFLKAGGEKFEYIPALNDAPAHIDLLEQLIVVNA
SIO_010081: CCS41_RS00855
subclass of: SO_0000673
so part of: CCS41_RS00855
location: 181149..182114
location: region:181149-182114:1
so has part: feature:181149-182114:1:exon

WP_072550384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181149-182114:1:exon

CCS41_RS16990
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16990
so part of: sequence
location: 182381..182506
location: region:182381-182506:1
so has part: feature:182381-182506:1:exon
subclass of: SO_0000010

position:182381:1
position: 182381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182506:1
position: 182506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182381-182506:1:exon

CCS41_RS16990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16990
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVINFEKLNKKIDKFGVQLTVRLGGILVFAISIITVLPKIL
SIO_010081: CCS41_RS16990
subclass of: SO_0000673
so part of: CCS41_RS16990
location: 182381..182506
location: region:182381-182506:1
so has part: feature:182381-182506:1:exon

WP_275887664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182381-182506:1:exon

CCS41_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00860
old locus tag: CCS41_00865
so part of: sequence
location: 182562..182993
location: region:182562-182993:1
so has part: feature:182562-182993:1:exon
subclass of: SO_0000010

position:182562:1
position: 182562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182993:1
position: 182993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182562-182993:1:exon

CCS41_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00860
old locus tag: CCS41_00865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737916.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF29 domain-containing protein
translation: MATRYDSDFHGWTQEQANLLRANNLNQLDTKNLLEEIESMGRSERRELRSRLEILLAYLLKWQYQPEKSGRSWQLTIEEQRAKIMECLDDSPSLKNKLNEHLEKAYASARRLAENETQMSQSIFPKHCPWTFEQIISSEFFPD
SIO_010081: CCS41_RS00860
subclass of: SO_0000673
so part of: CCS41_RS00860
location: 182562..182993
location: region:182562-182993:1
so has part: feature:182562-182993:1:exon

WP_072550383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182562-182993:1:exon

CCS41_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00865
old locus tag: CCS41_00870
so part of: sequence
location: 183112..184617
location: region:183112-184617:1
so has part: feature:183112-184617:1:exon
subclass of: SO_0000010

position:183112:1
position: 183112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184617:1
position: 184617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183112-184617:1:exon

CCS41_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00865
old locus tag: CCS41_00870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737938.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid II flippase MurJ
translation: MYPESFLKSINSAIFWRGFSKLSGLAKHVIIAGVIGLSAQLDSFFMMMALLGILVLSWGEMVDIMAVPHMVQSWQKGDTEEFKKIASGYMTLTLLGSLLLASLIYFFRDKLPLLAIGFETERGQLLIDAVPWLLPAIIFYIPFRHIGAVLRAKRQFSPLYQAEFLLSLATLLCVGFFNQQHNVLFWSYSLGIMGAFLYLLVRNWRFFLPLGNPFSLTVRQSLVMAPGLFILQSAQYVYVLTDQIFVSFLPTGMVSALFYATILIYLLPSVIGLDSAFITVISEQTDKQQRTKKINDLLALVIFFSLGATLFILVAGKNVIAMLLERGLFTTADTQSVAIALMAYSGVILPSFLNKPFDQIFQVERKIGLIVRRTVLGFMTNLILNSVFLFIFHWGLFGIALSTSISYWVMLLTSLQALRKIGYPIDLLRALKWGMWLALFLAIAYFCCRFVLIYFTNNLVILASCALLVAGALFLAALFYQGEEKKLIKMVIERYKTFSLV
SIO_010081: CCS41_RS00865
subclass of: SO_0000673
so part of: CCS41_RS00865
location: 183112..184617
location: region:183112-184617:1
so has part: feature:183112-184617:1:exon

WP_072550382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183112-184617:1:exon

CCS41_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00870
old locus tag: CCS41_00875
so part of: sequence
location: 184714..185571
location: region:184714-185571:1
so has part: feature:184714-185571:1:exon
subclass of: SO_0000010

position:184714:1
position: 184714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185571:1
position: 185571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184714-185571:1:exon

CCS41_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00870
old locus tag: CCS41_00875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856975.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: choline kinase family protein
translation: MLNLSQKDKVHITPIGGMTNTNYLVVTETMKVVLRLPGMATEHLINHSYEKNNSKLAATIGINTETIYFDSTTGIKITTYIPNAETLSPSIVRKQDNIEKISFCFRRLHQSNVKFANEFNVFSEYKRYKDILLDLGNAYCSLPHYKAIFDYFHEAQKILQKLDQDRCPCHNDLVAANIVKSGDRIYLIDWEYSGMNDPMWDLASHFLECQFTPEEEKIFLTFYFAGNIPDRSRQKILLFKFTQDVLWTFWTAIKEKNGNNFGDYGINRFKNAYQLMYQYQYQYEK
SIO_010081: CCS41_RS00870
subclass of: SO_0000673
so part of: CCS41_RS00870
location: 184714..185571
location: region:184714-185571:1
so has part: feature:184714-185571:1:exon

WP_240313785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184714-185571:1:exon

CCS41_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00875
old locus tag: CCS41_00880
so part of: sequence
location: 185561..186505
location: region:185561-186505:1
so has part: feature:185561-186505:1:exon
subclass of: SO_0000010

position:185561:1
position: 185561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186505:1
position: 186505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185561-186505:1:exon

CCS41_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00875
old locus tag: CCS41_00880
inference: COORDINATES: protein motif:HMM:NF015132.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MKNSTRAGTYYGLLSGVLWGASGTLVGMVLIDKHLQNLLFAPIILAFISDFLSSGYMLFYLIKKKYPVKEALTERQALIISVAALCGGPIGMSCYFMAIKYIGVGYAATISASYPAFGALIAFLFLKDKLHKIGVLGLFLSIITTMTLGYGAATDSEFSLIGLLFALMCAVSWGLEVVISSYGMRKSISPDVAYFIRQISSSFGYVLLFASVIPFSDITEYYFMDLKIILQIVVVSLIATGSYLYYYRSINLVGPIRAMGLNITYAVWAVLFGWSISNNKLDAQLIILCCIIMIGSFLTVSNPKSLSILLRYNK
SIO_010081: CCS41_RS00875
subclass of: SO_0000673
so part of: CCS41_RS00875
location: 185561..186505
location: region:185561-186505:1
so has part: feature:185561-186505:1:exon

WP_083429608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185561-186505:1:exon

CCS41_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00880
old locus tag: CCS41_00885
so part of: sequence
location: 186502..187218
location: region:186502-187218:1
so has part: feature:186502-187218:1:exon
subclass of: SO_0000010

position:186502:1
position: 186502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187218:1
position: 187218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186502-187218:1:exon

CCS41_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00880
old locus tag: CCS41_00885
inference: COORDINATES: protein motif:HMM:NF012695.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NTP transferase domain-containing protein
translation: MNAIILAAGLGSRFGDITKKNHKALLPVGSMPNIERTINSLKEFGIIEIHIVTGHMHHLFEYLKEKHACNLIYNEKYAQYNSIYSLYCAQEFFNDTLVIDADVVLLENIFQQSLYSCYYIIQRSRSEENEWVPCLNEEGFVENIVVTNKYLPSLLGVSYWVQTDCQLIKKKLWEYLKDEKNLINPKLYWDNIPVSILKKLKIKTFLVTETVAAEMDTLDHYKMISSQLGSAPMAAFKH
SIO_010081: CCS41_RS00880
subclass of: SO_0000673
so part of: CCS41_RS00880
location: 186502..187218
location: region:186502-187218:1
so has part: feature:186502-187218:1:exon

WP_072550379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186502-187218:1:exon

CCS41_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00885
old locus tag: CCS41_00890
so part of: sequence
location: 187239..188003
location: region:187239-188003:1
so has part: feature:187239-188003:1:exon
subclass of: SO_0000010

position:187239:1
position: 187239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188003:1
position: 188003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187239-188003:1:exon

CCS41_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00885
old locus tag: CCS41_00890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphocholine cytidylyltransferase family protein
translation: MRSIILTAGRGLRLQQPEDQQIPKCLLQFGGMSLLERHLRLLKNVGIDDIVLALGFRHELIEAELQRLSWQPRPEIVLNPHFDLGSVFTVHTVTDALIRGGDVLLMDSDVLYDERILGALVSDPPSANRLLIDYDFEAGDEPVKLCLRDGVPIELRKQPVAGLQYDTVGESVGFFRFDQSSARRLAAIVNHYVDSNRAHLPHEEAVRDLLQEGHHLFDVSDITGCPWIEIDFPEDMMRATHEVLPQLQPLLGIV
SIO_010081: CCS41_RS00885
subclass of: SO_0000673
so part of: CCS41_RS00885
location: 187239..188003
location: region:187239-188003:1
so has part: feature:187239-188003:1:exon

WP_072550378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187239-188003:1:exon

CCS41_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: aepX
locus tag: CCS41_RS00890
old locus tag: CCS41_00895
so part of: sequence
location: 188003..189724
location: region:188003-189724:1
so has part: feature:188003-189724:1:exon
subclass of: SO_0000010

position:189724:1
position: 189724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188003-189724:1:exon

CCS41_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: aepX
locus tag: CCS41_RS00890
old locus tag: CCS41_00895
EC number: 5.4.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737936.1
GO function: GO:0050188 - phosphoenolpyruvate mutase activity [Evidence IEA]
GO process: GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate mutase
translation: MNTVSPTDAIDSAESRVTQTHCAQLRQMLLSDQLEFLMEAHNGLSARIVREAGFRGIWASGLSISAQFGVRDNNEASWTQVVDMLEFMVDASNLPILLDGDTGYGNFNNMRRLVRKLEQRGVAGVCIEDKQFPKTNSFLNGERQPLAEIEEFVGKIKAGKDTQSDPNFSIVARVEALIAGWGMDEALHRAEAYRLAGADAILIHSKLSKPDEIVTFAREWAGRSPLVIVPTRYYSTPTDVFRQAGISTVIWANHSVRSAASAMQSVVKEIYQSQTLINVEDRIASVNEIFRLQDAAEYTAAEETYLSASNAPGAALVLAASRGARELEAITHDRPKVMLPIAGKPLLRWLVDGFKKEGINDITVVGGYRTEAIDNTGIKLVVNQRYATTGELVSLACAIDTFNGDVVISYGDLLFRHYVLRDLVESNAEFCVAVDSSQTVADNRTVRNFAYCTVKDDRGMFGQKVLLKHVTNGLTTVLSEDTLAQGRWIGLLNVRGKGLTKLKTVLTNLRRQPDFDTFGMPELLNALIAEGASIEVLYVHGHWRSVNDLSDFTNAQTPLKSIEDVSYEQEIDR
SIO_010081: CCS41_RS00890
subclass of: SO_0000673
so part of: CCS41_RS00890
location: 188003..189724
location: region:188003-189724:1
so has part: feature:188003-189724:1:exon

WP_072550377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188003-189724:1:exon

CCS41_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: aepY
locus tag: CCS41_RS00895
old locus tag: CCS41_00900
so part of: sequence
location: 189721..190911
location: region:189721-190911:1
so has part: feature:189721-190911:1:exon
subclass of: SO_0000010

position:189721:1
position: 189721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190911:1
position: 190911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189721-190911:1:exon

CCS41_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: aepY
locus tag: CCS41_RS00895
old locus tag: CCS41_00900
EC number: 4.1.1.82
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737935.1
GO function: GO:0033980 - phosphonopyruvate decarboxylase activity [Evidence IEA]
GO process: GO:0017000 - antibiotic biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphonopyruvate decarboxylase
translation: MIEARQFVEAAREKGFDWYAGVPCSYLTPFINYVLQDPSLHYVSMANEGDAVALIAGVALSGAPGLSHRRGITMMQNSGLGNAVSPLTSLTWTFRLPQLLIVTWRGQPGVADEPQHALMGPITPAILEKMAIPWEVFPTEPDAIVPALDRAIAHMDKTGRPYALVMQKGSVASYPLKSSVTTVSNTKSVSCVVSKWRGLESTARPSQCQALQKVVTQTPTVSTVVFASTGFCGRVLYAIDDRPNQLYMVGSMGCVVPLALGFALARPDLRVVILDGDGAALMRMGAFATVGAYGLSNLQHLLLDNGVHNSTGGQATVSSHLSFAGVAAACGYVSSLETDDIEEIDTWLSSAPLAGPRFACLLTNTGMPESLPRPSMTPVEVKTRLMRHINPTTGVN
SIO_010081: CCS41_RS00895
subclass of: SO_0000673
so part of: CCS41_RS00895
location: 189721..190911
location: region:189721-190911:1
so has part: feature:189721-190911:1:exon

WP_072550376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189721-190911:1:exon

CCS41_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00900
old locus tag: CCS41_00905
so part of: sequence
location: 190911..192011
location: region:190911-192011:1
so has part: feature:190911-192011:1:exon
subclass of: SO_0000010

position:192011:1
position: 192011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190911-192011:1:exon

CCS41_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00900
old locus tag: CCS41_00905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-aminoethylphosphonate aminotransferase
translation: MLLLNPGPVTLTESVRSSLLQPDLCHRESEFFDLQDEIKMRILKVYALDPAEWAAVLITGSGTAAVESMLAALIPKTGRLLIVENGVYGDRIAQIAAQYDIVHTRIVGDWMQEPNLDVIAAELDATPKDQRFTHLAMVHHETTTGRLNDLHSLSKLCRERGIKLLVDAVSSFGAEPLDFSDESLVGIAATANKCLHAVPGVSFVIVRRSALIQATCRTYYLDLVRLVRLQDQRNTPFTPAVHAYYALAAALREFEKQGGRSARYQHYSALAEQVRTGMEALGIESVIPISQSSVVLRAYRLPTGLTYARLHDALKAEGFVIYAGQGDLSKTLFRISTMGNLTAADICRLLEGVAKVIEPKDELTFT
SIO_010081: CCS41_RS00900
subclass of: SO_0000673
so part of: CCS41_RS00900
location: 190911..192011
location: region:190911-192011:1
so has part: feature:190911-192011:1:exon

WP_072550375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190911-192011:1:exon

CCS41_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00905
old locus tag: CCS41_00910
so part of: sequence
location: 192052..192327
location: region:192052-192327:1
so has part: feature:192052-192327:1:exon
subclass of: SO_0000010

position:192052:1
position: 192052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192327:1
position: 192327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192052-192327:1:exon

CCS41_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00905
old locus tag: CCS41_00910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYKACDDRDVAELPVKPFYDDLQVDSLNIHFNHAEIEERKSNKLIAIKQVFNSHAIKASRMINPGCGSGYASNLATCLNLDYLGMDFSSQ
SIO_010081: CCS41_RS00905
subclass of: SO_0000673
so part of: CCS41_RS00905
location: 192052..192327
location: region:192052-192327:1
so has part: feature:192052-192327:1:exon

WP_072550374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192052-192327:1:exon

CCS41_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00915
old locus tag: CCS41_00920
so part of: sequence
location: 192763..193593
location: region:192763-193593:1
so has part: feature:192763-193593:1:exon
subclass of: SO_0000010

position:192763:1
position: 192763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193593:1
position: 193593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192763-193593:1:exon

CCS41_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00915
old locus tag: CCS41_00920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017628690.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LicD family protein
translation: MIEKSVLRQAQLLLLEALKEIDRICVKHNIDYWLDGGTLLGAKRDGKFIPWDDDVDIGMTRKDYNKFLKVSELEIDKEKYFLQTAYSDVFYSSINIPCKLRILKTEIIEKIEIERCFYDERSQHGLYIDIFPYDKYSVSNFKIKYIERILSWLFVIKLLSKRSNKNFFRSIVIKFISIFISRSLLLKLVNIQSDFMSKKTTNYVYGAGIETPFNPIKLKEDQIFPLSKIMFENEMFNCPRDVDGYLESQYGPDYFLIPPEEKRTSHHHSIKLSDDS
SIO_010081: CCS41_RS00915
subclass of: SO_0000673
so part of: CCS41_RS00915
location: 192763..193593
location: region:192763-193593:1
so has part: feature:192763-193593:1:exon

WP_240313786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192763-193593:1:exon

CCS41_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00920
old locus tag: CCS41_00925
so part of: sequence
location: 194190..195026
location: region:194190-195026:1
so has part: feature:194190-195026:1:exon
subclass of: SO_0000010

position:194190:1
position: 194190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195026:1
position: 195026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194190-195026:1:exon

CCS41_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00920
old locus tag: CCS41_00925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001380548.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LicD family protein
translation: MNNTNKILRQAQLKMIDALKEINRICIANNINYWLDSGTLLGAQRDGRFISWDDDIDIGMTRKDYNRFIQICDKQLNKEKYFLQTAESDPYYININVPCKLRILNTKIIEKFEVKYQCYDARSSHGLFIDIFPFDKYSKHYFIRKYIERILSIFFSIKVISYFSTFTEVKGIKKLFPLIKPLGKLISKDFLISTTKKISRNMSLRTKDYVYGPGIEMGLGKIIFSDNEIFPLREIKFEDTIFKCPNNVHSYLTKYYGDDYMELPPENKRVWHFESIEL
SIO_010081: CCS41_RS00920
subclass of: SO_0000673
so part of: CCS41_RS00920
location: 194190..195026
location: region:194190-195026:1
so has part: feature:194190-195026:1:exon

WP_072550372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194190-195026:1:exon

CCS41_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00925
old locus tag: CCS41_00930
so part of: sequence
location: 195254..196357
location: region:195254-196357:1
so has part: feature:195254-196357:1:exon
subclass of: SO_0000010

position:195254:1
position: 195254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196357:1
position: 196357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195254-196357:1:exon

CCS41_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00925
old locus tag: CCS41_00930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKKYLFISCVIFYYLSVLASSTYLNVDKEIYFFIRIFIFINFIIIVFLSGCNVLISSFIMLPFLIFFSMISKNTYFIHFYVLFIFCLIFIFHHEKLTLKNCFIPIWLGSLLGLFTLLGLYFTGFSDNVVYAFAGVKKNSLGFSNPNTIGLIAAGIVIIGYYINRKIAFLSLLLFFCIYLQVFSRTSLILISIFYFYQFVFKKLSDKFIRIGIMLIIFLSFLLISILVTDNGFYFSLLLDSPVFIKLDEVLSSRLSFACEYILGKNLLFPSISQTNQDFSWANLVTMLGGLFLYLILALQFALMFRVERKFLSFYFLCLLLTFSSLFAENIVYSYFPLGLFSAFPYALMFYYFSKDLSKFIINKAVQ
SIO_010081: CCS41_RS00925
subclass of: SO_0000673
so part of: CCS41_RS00925
location: 195254..196357
location: region:195254-196357:1
so has part: feature:195254-196357:1:exon

WP_072550371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195254-196357:1:exon

CCS41_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00930
old locus tag: CCS41_00935
so part of: sequence
location: 196511..197524
location: region:196511-197524:1
so has part: feature:196511-197524:1:exon
subclass of: SO_0000010

position:196511:1
position: 196511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197524:1
position: 197524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196511-197524:1:exon

CCS41_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00930
old locus tag: CCS41_00935
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MKIKYSIIMPCHNTSDFIDKTLKKISFLLLSRNDVEIIFVDDGSTDDTYKKLSSFSFEKMLIVRKKNGGVSSARNQGILHATGDYILFLDADDFYSYNIFEKLDAVTSTIDLIFFGYNTVNLNDNIIRNYALSDSDNINTLFSKNDSELLLSNFFLKKIYFHICAVAIRRKFIQANNIFFDELVYYGEDIDFIIRAISLTNNIFYIKDILFHYVNRPNSTVKEPVSMSQLTRIDSSEKLYLYFSTNNYSMDLVKKFNFYHLTLHIHLILGIFRKGLKTDGTDDVYDQISKITLLLKRKIKFPYTILGLKCYIFYKILCLIPANRYKNFILFSQRYLK
SIO_010081: CCS41_RS00930
subclass of: SO_0000673
so part of: CCS41_RS00930
location: 196511..197524
location: region:196511-197524:1
so has part: feature:196511-197524:1:exon

WP_083429607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196511-197524:1:exon

CCS41_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00935
old locus tag: CCS41_00940
so part of: sequence
location: 197786..198772
location: region:197786-198772:1
so has part: feature:197786-198772:1:exon
subclass of: SO_0000010

position:197786:1
position: 197786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198772:1
position: 198772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197786-198772:1:exon

CCS41_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00935
old locus tag: CCS41_00940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737923.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MNNTKDITVSVVAGASGFIGSHLCNQLLNERKIVVAIDNFSRGQKSYLESYFNDSHFKLLCGDLSKRDDTMCAFEEAAKQGTISEVWHLAANSDIPAGVADADVDLKDTFLTTVEILRATKLYHVKEIYFASSSAIYGDLGNVELHENIGPLLPISNYGAMKLASEALISASCESDLNKACIFRFPNVVGAPATHGVIYDFINKLIASPECLEVLGNGTQQKAYLHVSDLISAMLVVRAKQDAPKRDVINIGPIDKGVTVQWIAEQVIARINPLAQIKYGKGNKGWIGDVPKFHYSTEKLQSYGWKPQLGSSEAVRRAIDEIASQLGQ
SIO_010081: CCS41_RS00935
subclass of: SO_0000673
so part of: CCS41_RS00935
location: 197786..198772
location: region:197786-198772:1
so has part: feature:197786-198772:1:exon

WP_072550369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197786-198772:1:exon

CCS41_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00940
old locus tag: CCS41_00945
so part of: sequence
location: 198801..199601
location: region:198801-199601:1
so has part: feature:198801-199601:1:exon
subclass of: SO_0000010

position:198801:1
position: 198801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199601:1
position: 199601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198801-199601:1:exon

CCS41_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00940
old locus tag: CCS41_00945
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737922.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKPRVSIIIPTFNELLATLERSLKSIFEQSFIDFECIVIDESTDSDRADFCKQLCSQDSRFIYVNPQKRIGLAASLNLALQMARADWVARFDSDDICMPDRIAQQVEFLSKNKDVDVLGGAIEIVDDSLNRVGFKFYPEAHNEIIRKSHFINPLAHPTVMFRRNTVLDSGGYDPRFKYGEDLELWLRLINKNAKFANLDKILIQYRQSTLSRPDINWRFNFKARIKNFRPHDLIRRVSGIAIIGCWAFLPRKIQESIYKVLILRRK
SIO_010081: CCS41_RS00940
subclass of: SO_0000673
so part of: CCS41_RS00940
location: 198801..199601
location: region:198801-199601:1
so has part: feature:198801-199601:1:exon

WP_119797026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198801-199601:1:exon

CCS41_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00945
old locus tag: CCS41_00950
so part of: sequence
location: 199618..201522
location: region:199618-201522:1
so has part: feature:199618-201522:1:exon
subclass of: SO_0000010

position:199618:1
position: 199618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201522:1
position: 201522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199618-201522:1:exon

CCS41_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00945
old locus tag: CCS41_00950
inference: COORDINATES: protein motif:HMM:NF012695.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD-IIIA family hydrolase
translation: MRNQVAILAGGLGTRLKSTIGNLPKPMAPILGKPILEHQIELCKKHGFDRIALLVHYQSEAIRSYFRDGAAWDVELTYVEEVSARGTAGALRDALAVLEDKFLVLYADIYADIDLRRLWQMATRSDAAGTLLIHPNDHPQDSDLVQLDGAGYVIAIRTYPHPEGVYYPNIVNAALYVLQKKHLMNLIPDQGKYDLVKDTFKSMLASGHKFKAYITPEYIKDMGTPSRLNKVERDLILGLPERLSVRQQRVAVFLDRDGTLNKEVNYLSCAGQLELLPGAGEAIHQLNRAGRLAICVTNQPVLARGNATWEDMRQIHARLDHLLGQEHAYLDRLYLCPHHPASGFPGETPALKKVCDCRKPQSGLIDRAVRELDIDRRRSWMIGDTTSDILAGQRAGVCTILLRTGYAGLDNKYQAIPDYICDDILSAVDWILSGHARLVGKLMPVAIEMQDTRMILIGGASRSGKTMAAQVLKELVEAMGRVVHILPLDAWLKAKEQRIEGCGVMSRYDMDQLVPLLESLRNSKERITLHVSQWNRRKSELISTRRLSIGPNDFLICEGVPALLHPTLREMTPHRLHLDVPQQVRHQRMCFEYAWRGFDACEVAKCIGSREQDEVADVLAAAQYASYKITLSGR
SIO_010081: CCS41_RS00945
subclass of: SO_0000673
so part of: CCS41_RS00945
location: 199618..201522
location: region:199618-201522:1
so has part: feature:199618-201522:1:exon

WP_072550367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199618-201522:1:exon

CCS41_RS15885
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15885
so part of: sequence
location: 201525..201779
location: region:201525-201779:1
so has part: feature:201525-201779:1:exon
subclass of: SO_0000010

position:201525:1
position: 201525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201779:1
position: 201779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201525-201779:1:exon

CCS41_RS15885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIVSKTPLRMSFVGGGSDLPVFYREELGAVLSTSIDKYMYICVNRKFDGGIRVNYSKTEEVDSPCQIEHPLVREALALTDISGG
SIO_010081: CCS41_RS15885
subclass of: SO_0000673
so part of: CCS41_RS15885
location: 201525..201779
location: region:201525-201779:1
so has part: feature:201525-201779:1:exon

WP_205411444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201525-201779:1:exon

CCS41_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00950
old locus tag: CCS41_00955
so part of: sequence
location: 201791..202513
location: region:201791-202513:1
so has part: feature:201791-202513:1:exon
subclass of: SO_0000010

position:201791:1
position: 201791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202513:1
position: 202513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201791-202513:1:exon

CCS41_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00950
old locus tag: CCS41_00955
inference: COORDINATES: protein motif:HMM:NF012509.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: galactokinase
translation: MADIPSKGSGLGSSSTYTVGLLNALYAFKNSFASKETLARQACEIEIIRCGEPIGKQDQYASAYGGLNLIRFHADESVSVDPVICRPELLRALEESTLVFYTGRTRSASAILAEQTKAMTQSNCKLLMRRMVELAFDMKKELESDSLDNFGQMLDENWRLKAQLANGVTDPQIDDWYQRGITHGALGGKLLGAGNGGFMMFFAPPEIHDPIKKAMGGLQSVKFRFDRNGTQIVFYQPSEG
SIO_010081: CCS41_RS00950
subclass of: SO_0000673
so part of: CCS41_RS00950
location: 201791..202513
location: region:201791-202513:1
so has part: feature:201791-202513:1:exon

WP_205411445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201791-202513:1:exon

CCS41_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00955
old locus tag: CCS41_00960
so part of: sequence
location: 202519..203118
location: region:202519-203118:1
so has part: feature:202519-203118:1:exon
subclass of: SO_0000010

position:202519:1
position: 202519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203118:1
position: 203118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202519-203118:1:exon

CCS41_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00955
old locus tag: CCS41_00960
inference: COORDINATES: protein motif:HMM:NF024969.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIS domain-containing protein
translation: MTQKNFSVANYLNSHTDLAKELNLSTVESGISLIKEKFSANKKIITCGNGGSASTASHYITDWNKMVSLATGKKFRGFSLCDNIGLITAFGNDISYDDVFCGQLAAIADEGDLLVAISGSGNSPNILRAVEYASLNNIDTLAVVGYDGGKLMQQAKLSVWVPSFDMQLCEDVHLMFGHMVMKALTMSVNSFNISTTLES
SIO_010081: CCS41_RS00955
subclass of: SO_0000673
so part of: CCS41_RS00955
location: 202519..203118
location: region:202519-203118:1
so has part: feature:202519-203118:1:exon

WP_072550365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202519-203118:1:exon

CCS41_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00960
old locus tag: CCS41_00965
so part of: sequence
location: 203588..205261
location: region:203588-205261:1
so has part: feature:203588-205261:1:exon
subclass of: SO_0000010

position:203588:1
position: 203588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205261:1
position: 205261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203588-205261:1:exon

CCS41_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00960
old locus tag: CCS41_00965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKKKVGLIVDDIVVSKRLFDLIQLSKESSVYEISCLIVQKTSQSGLRSLLKKVFDYINRHGCRKFFSAVTFKVILKIEAQFLKRTYSFKDFDTKYDLGKCDIESVIVNPQISRSGFVYRYNDEDLNKIKEKNLDILIRVGSGILRGDVLNICPRRIISFHYANNDINRGCPPGFWEVFYQQRSTGFIIQLLTDELDGGDVIYKGSIATSFLYSLNLARMNTKSPIFMHRVLEDLFSSNRDLLVYPKVPYSFPLYKIPNLFQQLHYIVKTINYVSKKVLRTLTSRRYRWGVAYQYCLNWREVTLWKSKVIKNPPNSFLANPFIIERNCSHYCFVEDFDYTRKKGVISVYKITKDGYTNLGIALREDFRLSYPFIIQSNNELYMCPTTHEAKDIRIYRCIDFPLVWEIEKILISNVSAANTNIFYMDEKWWLMTNIDSSILGDHGSELHVFHSKDLLTEPWISHPGNPVVFDSEQARNGGLLFEDNKIFRVFQVQGFDLYGENFGVARITRLDENHYTEDVEFTVKPEFLRKAKATHTYSFNKGLMAIGFAKIENYKK
SIO_010081: CCS41_RS00960
subclass of: SO_0000673
so part of: CCS41_RS00960
location: 203588..205261
location: region:203588-205261:1
so has part: feature:203588-205261:1:exon

WP_119797027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203588-205261:1:exon

CCS41_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00965
old locus tag: CCS41_00970
so part of: sequence
location: 205357..206316
location: region:205357-206316:1
so has part: feature:205357-206316:1:exon
subclass of: SO_0000010

position:205357:1
position: 205357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206316:1
position: 206316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205357-206316:1:exon

CCS41_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00965
old locus tag: CCS41_00970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004934674.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MIKKIAILGGSGFIGSRLSQRLVKMNINFIIIDKIKSIQFPEKWQFADVTQSSTLDKTLAGVDIIINLAAEHQDNVEPKSLYYDVNVQGAKNVCAAAERLNIQHIIFTSSVAVYGFVEHETAEDGAYRPFNDYGKSKLAAEQVYDEWAAKNSSRTLVMVRPTVVFGEGNRGNVYNLFRQIASGKFLMVGGGNNKKSMAYVENIAAFLQYVITLSPDRYVFNYIDKPDFTMNELTDIIYQALDKQKNNFRVPYNIGLFAGYCFDLLAKVTKRKYPISRIRVKKFCARTQFRSDSIKQHDFKAPVSLEEGIIKTMRSEFIK
SIO_010081: CCS41_RS00965
subclass of: SO_0000673
so part of: CCS41_RS00965
location: 205357..206316
location: region:205357-206316:1
so has part: feature:205357-206316:1:exon

WP_072550363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205357-206316:1:exon

CCS41_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00970
old locus tag: CCS41_00975
so part of: sequence
location: 206337..207089
location: region:206337-207089:1
so has part: feature:206337-207089:1:exon
subclass of: SO_0000010

position:206337:1
position: 206337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207089:1
position: 207089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206337-207089:1:exon

CCS41_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00970
old locus tag: CCS41_00975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012776386.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MTLSNALGFTWNRETIPTIIPAHSIERVCFRFHRMLAEFVWDASMLEGNPFTFPEVKTLLGGITVGGRKLADQEQVLNLAESAKFLVSLVKTGQFELNKTIFTQLHNIVARNEALEWGCFRGEGQETNYTPHVSLGEYGRYLPLPTLAGGAILHDRFMQGISVLNEHVTNVFEKATIFFLFGALQQFFFDGNKRTSRLMMNGILMSQGVDAISVPAVKLHEFNEKMVRFYLSKDANEMIAFLFHCHPDAK
SIO_010081: CCS41_RS00970
subclass of: SO_0000673
so part of: CCS41_RS00970
location: 206337..207089
location: region:206337-207089:1
so has part: feature:206337-207089:1:exon

WP_072550362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206337-207089:1:exon

CCS41_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00975
old locus tag: CCS41_00980
so part of: sequence
location: 207271..207495
location: region:207271-207495:1
so has part: feature:207271-207495:1:exon
subclass of: SO_0000010

position:207271:1
position: 207271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207495:1
position: 207495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207271-207495:1:exon

CCS41_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00975
old locus tag: CCS41_00980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705592.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6364 family protein
translation: MNITLSVDQQVAQGAREAARKMGKSLNQVVRDYLEQLAGGNSREQQWIQFEARCLQSPGQLGGWHFNRDDANER
SIO_010081: CCS41_RS00975
subclass of: SO_0000673
so part of: CCS41_RS00975
location: 207271..207495
location: region:207271-207495:1
so has part: feature:207271-207495:1:exon

WP_072550361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207271-207495:1:exon

CCS41_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS00980
old locus tag: CCS41_00985
so part of: sequence
location: 207455..207916
location: region:207455-207916:1
so has part: feature:207455-207916:1:exon
subclass of: SO_0000010

position:207455:1
position: 207455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207916:1
position: 207916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207455-207916:1:exon

CCS41_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS00980
old locus tag: CCS41_00985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705591.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MVGTSIVTMPMSVNHRTIRSFIDTNILIYADASDVPVKQRAALALLKQLYQDKSGVLSTQVLQEYCNVAIKKLKLSPQYIRAQLDLYQQFEVVQVTPTIIRAGIDLHQTRSVAFYDALVLASAQIASCRLLLSEDMNTGEHVDAVQIINPFID
SIO_010081: CCS41_RS00980
subclass of: SO_0000673
so part of: CCS41_RS00980
location: 207455..207916
location: region:207455-207916:1
so has part: feature:207455-207916:1:exon

WP_240313787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207455-207916:1:exon

CCS41_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: cpsG
locus tag: CCS41_RS00990
old locus tag: CCS41_00990
so part of: sequence
location: 208079..209455
location: region:208079-209455:1
so has part: feature:208079-209455:1:exon
subclass of: SO_0000010

position:208079:1
position: 208079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209455:1
position: 209455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208079-209455:1:exon

CCS41_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: cpsG
locus tag: CCS41_RS00990
old locus tag: CCS41_00990
EC number: 5.4.2.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014462444.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphomannomutase CpsG
translation: MTKLSCFKAYDIRGRLGDELNEDIAYRIGRAYAEFVKPKKVVVGGDVRLTSESLKLALSRGLQDAGADVLDIGLAGTEEVYFATFHLAMDGGIAVTASHNPIDYNGMKLVGAGARPISSDTGLLDIQRLVELNEFSSVDPAARGSYRQISILDAYIDHLMSYLTPAHFKPLKLVINSGNGAAGHVIDALEDRFEQLKMPITLIKIHNQPDGTFPNGIPNPLLPECRQDTSDAVLAHGADIGIAFDGDFDRCFLFNHKGEFIEGYYIVGLLSEAFLQKEPGAKIIHDPRLSWNTIEVVKAAGGKPVMSKSGHAFIKQRMREEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELLCVKNKTLEQVVKDRMAAYPASGEINSKLVNPTMAMERVRAVYQQYALSADETDGISLEFFDWRFNLRSSNTEPVVRLNVESRANKILLDEKTDEILELLRRTY
SIO_010081: CCS41_RS00990
subclass of: SO_0000673
so part of: CCS41_RS00990
location: 208079..209455
location: region:208079-209455:1
so has part: feature:208079-209455:1:exon

WP_072550395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208079-209455:1:exon

CCS41_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: wzz(fepE)
locus tag: CCS41_RS00995
old locus tag: CCS41_00995
so part of: sequence
location: 209572..210696
location: region:209572-210696:1
so has part: feature:209572-210696:1:exon
subclass of: SO_0000010

position:209572:1
position: 209572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210696:1
position: 210696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209572-210696:1:exon

CCS41_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: wzz(fepE)
locus tag: CCS41_RS00995
old locus tag: CCS41_00995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004718781.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS O-antigen length regulator Wzz(fepE)
translation: MNEEIKRNQNVDAMSNNYDFSSLSSSKDEIDLFELFSIIVKSKKTILWMTLLFAIVAAGVCYLLPQKWTSTAVITSATDQQLQVLDKLSSELTVLGINIGIDSSYLLGTFEQSFDSADLREKYLINSDYFRLKMKENPIDKIQQRILIENIVNNNILSNSSLDKKDKENKHYNFYTLSYSAETPQDAYNLLQGYIDYVNAIVNKNVKIKIQRAVDIAKLNTDEQYRFDLLKAKNNLSVNIEKLKIAIAIANVAAVKTPVNGSGTFNDDDTFPITIGSYALNKKLESLQTIGDITTINADLLNRKLHLNQLNMLAIPKLTVMPFQYLQQASSSIKKNSPKSTFIVLLSVFMGLFCSVGYVLIRHFVKERKNQLAG
SIO_010081: CCS41_RS00995
subclass of: SO_0000673
so part of: CCS41_RS00995
location: 209572..210696
location: region:209572-210696:1
so has part: feature:209572-210696:1:exon

WP_072550359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209572-210696:1:exon

CCS41_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: mscL
locus tag: CCS41_RS01000
old locus tag: CCS41_01000
so part of: sequence
location: complement(210881..211285)
location: region:210881-211285:-1
so has part: feature:210881-211285:-1:exon
subclass of: SO_0000010

position:210881:-1
position: 210881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211285:-1
position: 211285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210881-211285:-1:exon

CCS41_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: mscL
locus tag: CCS41_RS01000
old locus tag: CCS41_01000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706688.1
GO function: GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
GO process: GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: large-conductance mechanosensitive channel protein MscL
translation: MSLIKEFREFALRGNVVDLAVGVIIGSAFGKIISSLVGDIIMPVLGLLIGGIDFKQLYFILRAAGNTTPAVVMNYGLFIQSVFDFLLIALAIFATVKLMNHLRRMQTIESTAPSNEEKLLTEIRDLLTNVTKLK
SIO_010081: CCS41_RS01000
subclass of: SO_0000673
so part of: CCS41_RS01000
location: complement(210881..211285)
location: region:210881-211285:-1
so has part: feature:210881-211285:-1:exon

WP_072550358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210881-211285:-1:exon

CCS41_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: trkA
locus tag: CCS41_RS01005
old locus tag: CCS41_01005
so part of: sequence
location: complement(211565..212947)
location: region:211565-212947:-1
so has part: feature:211565-212947:-1:exon
subclass of: SO_0000010

position:211565:-1
position: 211565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212947:-1
position: 212947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211565-212947:-1:exon

CCS41_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: trkA
locus tag: CCS41_RS01005
old locus tag: CCS41_01005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0006813 - potassium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Trk system potassium transporter TrkA
translation: MKIIILGAGQVGATLAENLVVEKNDITVVDTNAERLNQLKEKFDLRVVQGKGSYPRVLREAGAENVDMLVAVTSCDETNMVACQIAYSLFKTPRRIARIRSPEYIRETDTLFQLAGIPIDHLISPEQLVIDSIYKLIEYPGALQVVNFSEGKVSIVAVKAYYGGSSVGSDLASLSDVMRKKNVNALVVAIFRQDQPIHPQKSTIIEAGDEIFFIVDSQYIKTVMSELQPLEKSYERIMIAGGGNVGAGLALRLENDYKVKLIENNEQRAAELAEMLHKTVVYHSDASDQERLAEGHIEQVDVFITITNNDEINIMSAMLAKNMGAKKAMVLIQRSAYVALVQGGVVDIVISPQQATISALLGYVRKADIIGVASLRRGVAEAIEAIAHGDESTSRVIGREVGKIKLPPGTTIGAIVRGDKVIIANNDSVIQQGDHVVMFITHKEFIADVEKLFQPSPFFL
SIO_010081: CCS41_RS01005
subclass of: SO_0000673
so part of: CCS41_RS01005
location: complement(211565..212947)
location: region:211565-212947:-1
so has part: feature:211565-212947:-1:exon

WP_072550357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211565-212947:-1:exon

CCS41_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rsmB
locus tag: CCS41_RS01010
old locus tag: CCS41_01010
so part of: sequence
location: complement(212972..214297)
location: region:212972-214297:-1
so has part: feature:212972-214297:-1:exon
subclass of: SO_0000010

position:212972:-1
position: 212972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214297:-1
position: 214297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212972-214297:-1:exon

CCS41_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rsmB
locus tag: CCS41_RS01010
old locus tag: CCS41_01010
EC number: 2.1.1.176
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004716368.1
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
translation: MKNTYNLRSIAAKAISQVLDQGKSLNTVLPGSQQSVSVKDRALLQELCFGTLRVLPKLECCIQQLMTRPMSGKQRVFHYLLMIGLYQLIYTRIPAHAVLSETVAAATALKRPQLKGLINGVLRQFQRQQIELLERIEQTSNDESHYLHPSWLFNRIQMAYPHQWQQILIANNQKPPMWLRVNRLHQSRREYLALLQQAGIEAQAHPSYKDAIRLIVPRSVDSLPGFALGWITVQDASAQGCVDLLDPQNGEQILDLCAAPGGKTTHILEVAPNAQVLAVDIDEQRLQRVKENLQRLQLQATVKMGDGRSPEAWCGDRLFDRILLDAPCSATGVIRRHPDIKWLRRDSDITELARLQAEIMDAIWPKLKRGGLMLYATCSILPEENQQQIASFLQRQPDAQLIKTKVTDTFGKQNLPHPDEGDGFFYARLTKSARDKSTYET
SIO_010081: CCS41_RS01010
subclass of: SO_0000673
so part of: CCS41_RS01010
location: complement(212972..214297)
location: region:212972-214297:-1
so has part: feature:212972-214297:-1:exon

WP_072550356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212972-214297:-1:exon

CCS41_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: fmt
locus tag: CCS41_RS01015
old locus tag: CCS41_01015
pseudo: true
so part of: sequence
location: complement(214314..215275)
location: region:214314-215275:-1
so has part: feature:214314-215275:-1:exon
subclass of: SO_0000010

position:214314:-1
position: 214314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215275:-1
position: 215275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214314-215275:-1:exon

CCS41_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: fmt
locus tag: CCS41_RS01015
old locus tag: CCS41_01015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015841916.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: methionyl-tRNA formyltransferase
SIO_010081: CCS41_RS01015
subclass of: SO_0000673
so part of: CCS41_RS01015
location: complement(214314..215275)
location: region:214314-215275:-1
so has part: feature:214314-215275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214314-215275:-1:exon

CCS41_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: def
locus tag: CCS41_RS01020
old locus tag: CCS41_01020
so part of: sequence
location: complement(215298..215837)
location: region:215298-215837:-1
so has part: feature:215298-215837:-1:exon
subclass of: SO_0000010

position:215298:-1
position: 215298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215837:-1
position: 215837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215298-215837:-1:exon

CCS41_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: def
locus tag: CCS41_RS01020
old locus tag: CCS41_01020
EC number: 3.5.1.88
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004709217.1
GO function: GO:0042586 - peptide deformylase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide deformylase
translation: MSALKILRFPDERLRTIAEPVKKVDAGIQRIVHDMFETMYKEEGIGLAATQVDIHQQIIVIHIVGDRYENDVPEQSNRPWVLINPELLHRSGETSIEEGCLSIPDQRALVPRAEKVTIRALDIEGKSFDLDADGLLAICIQHEMDHLVGKLFVDYLSPLKRQRIRQKLDKMARLAARDN
SIO_010081: CCS41_RS01020
subclass of: SO_0000673
so part of: CCS41_RS01020
location: complement(215298..215837)
location: region:215298-215837:-1
so has part: feature:215298-215837:-1:exon

WP_072550354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215298-215837:-1:exon

CCS41_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: dprA
locus tag: CCS41_RS01025
old locus tag: CCS41_01025
so part of: sequence
location: 216272..217360
location: region:216272-217360:1
so has part: feature:216272-217360:1:exon
subclass of: SO_0000010

position:216272:1
position: 216272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217360:1
position: 217360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216272-217360:1:exon

CCS41_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: dprA
locus tag: CCS41_RS01025
old locus tag: CCS41_01025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705492.1
GO process: GO:0009294 - DNA-mediated transformation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-protecting protein DprA
translation: MIIAEIWLRISMVKGIGAVRSCTIAERLIYYSDVHPDVLMAAGLNKLQAQQFIGANDQYIASTLAWLEDPSHHMLIYGHLDYPERLSHISSAPLLLFVTGNIAAISRPQVAMVGSRSFSHYGRRWARYFASELVQHGLAITSGLALGIDAICHQSALYSQGETIAVLGSGLKNIYPRQHDELAHRIVEQGGALVSEFLVTSSPLATHFPRRNRIISGLSSAVVVVEASLKSGSLITARYALEQGRDVFALPGPLDSPTSDGVHWLIQQGAYLANDPRDIVEQLEGSLQWLSLNKDTSPPFPEEQLELPFVDVLTNVEYEVTAVDTVAERAGQSVAEVVIKLLDLELAGWISAVPGGYIRVRG
SIO_010081: CCS41_RS01025
subclass of: SO_0000673
so part of: CCS41_RS01025
location: 216272..217360
location: region:216272-217360:1
so has part: feature:216272-217360:1:exon

WP_072550353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216272-217360:1:exon

CCS41_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01030
old locus tag: CCS41_01030
so part of: sequence
location: 217453..218475
location: region:217453-218475:1
so has part: feature:217453-218475:1:exon
subclass of: SO_0000010

position:217453:1
position: 217453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218475:1
position: 218475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217453-218475:1:exon

CCS41_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01030
old locus tag: CCS41_01030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MKIELTADQKITLEAQHRQSHDRRVCDRIRCVLLSADGWTPPMIAHSQLINETTVRRHLTDYHKLNKLKPENGGSDGYLNAEQTTSLVEHLTQPLYHHNHQIVAYIAGRWNITFTVSGLYKGLKQHGFSYKKPKGVPHKFDVEKQPQFIKTYSELKDAAGNDPILFIDAVHPTQATKISYGWIRKGQDKTIETTGSRTRLNIMGALNIQNVANPIIRDDETINSENVVHFLSAIRAHYPITTTAHVILEGAGYHRSQLVQDAALTLNIQLHYLPPYSPNLNPIERLWKVMNEQTRNNRYYPSKQSFKNDILNFFEVKLPQMASSLVSRLNDNFQALNPAS
SIO_010081: CCS41_RS01030
subclass of: SO_0000673
so part of: CCS41_RS01030
location: 217453..218475
location: region:217453-218475:1
so has part: feature:217453-218475:1:exon

WP_119797028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217453-218475:1:exon

CCS41_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: mtr
locus tag: CCS41_RS01035
old locus tag: CCS41_01035
pseudo: true
so part of: sequence
location: 218613..219856
location: region:218613-219856:1
so has part: feature:218613-219856:1:exon
subclass of: SO_0000010

position:218613:1
position: 218613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219856:1
position: 219856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218613-219856:1:exon

CCS41_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: mtr
locus tag: CCS41_RS01035
old locus tag: CCS41_01035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705071.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015173 - aromatic amino acid transmembrane transporter activity [Evidence IEA]
GO process: GO:0015801 - aromatic amino acid transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tryptophan permease
SIO_010081: CCS41_RS01035
subclass of: SO_0000673
so part of: CCS41_RS01035
location: 218613..219856
location: region:218613-219856:1
so has part: feature:218613-219856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218613-219856:1:exon

CCS41_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01040
old locus tag: CCS41_01040
so part of: sequence
location: 220558..220746
location: region:220558-220746:1
so has part: feature:220558-220746:1:exon
subclass of: SO_0000010

position:220558:1
position: 220558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220746:1
position: 220746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220558-220746:1:exon

CCS41_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01040
old locus tag: CCS41_01040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611161.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1 family transposase
translation: MNGDIQRTIHIVSKLYTQRRERENLTLKTRLKRLNRKTRGYSKSEKIHDKVIGIFIEREYYL
SIO_010081: CCS41_RS01040
subclass of: SO_0000673
so part of: CCS41_RS01040
location: 220558..220746
location: region:220558-220746:1
so has part: feature:220558-220746:1:exon

WP_275887665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220558-220746:1:exon

CCS41_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01045
so part of: sequence
location: 220896..222011
location: region:220896-222011:1
so has part: feature:220896-222011:1:exon
subclass of: SO_0000010

position:220896:1
position: 220896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222011:1
position: 222011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220896-222011:1:exon

CCS41_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01045
inference: COORDINATES: protein motif:HMM:NF012573.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium-binding protein
translation: MTTANNLSAVATTLEEDARNNQRQQAQRNNVVLTGKRGRDNYIINKEGNTGIEIIINNDGNTPLDDLSVAFAQDTLQLQFPIEQIHLHKQGDDIIFSHRSSPEQYPRIRLLNFMAHERYRHLSIMDENSRLYDLVVDAEDHVLLMQRQINNGDNNLILHNTTATTGISLHAGPGHDTIIDKSGGSNTLHGDDGNDMLLAWSGNNALFGGAGNDRLVGGTGHDVLCGETGNDTLVGNAGNDIMVGGVGDDIYLFARGDGHDSILEDGGTDSLVFTSREITRETLWLKKDGDNLRIQVNGANSGDTVTVLGYYDNPKNKIEMISVERYQLAGDNIDRMVEAMSTFTSSESISAAGNINLQTHINSLWIATSNP
SIO_010081: CCS41_RS01045
subclass of: SO_0000673
so part of: CCS41_RS01045
location: 220896..222011
location: region:220896-222011:1
so has part: feature:220896-222011:1:exon

WP_072549985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220896-222011:1:exon

CCS41_RS16215
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16215
pseudo: true
so part of: sequence
location: <222285..>222416
location: region:222285-222416:1
so has part: feature:222285-222416:1:exon
subclass of: SO_0000010

position:222285:1
position: 222285
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:222416:1
position: 222416
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222285-222416:1:exon

CCS41_RS16215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001898375.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: CCS41_RS16215
subclass of: SO_0000673
so part of: CCS41_RS16215
location: <222285..>222416
location: region:222285-222416:1
so has part: feature:222285-222416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222285-222416:1:exon

CCS41_RS16995
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16995
so part of: sequence
location: 222598..222732
location: region:222598-222732:1
so has part: feature:222598-222732:1:exon
subclass of: SO_0000010

position:222598:1
position: 222598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222732:1
position: 222732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222598-222732:1:exon

CCS41_RS16995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16995
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLALLTSQRVGDIQRMKWQGTSPSFHEIRSLYPMNFELRQGGN
SIO_010081: CCS41_RS16995
subclass of: SO_0000673
so part of: CCS41_RS16995
location: 222598..222732
location: region:222598-222732:1
so has part: feature:222598-222732:1:exon

WP_275887666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222598-222732:1:exon

CCS41_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01060
old locus tag: CCS41_01065
so part of: sequence
location: 222761..222943
location: region:222761-222943:1
so has part: feature:222761-222943:1:exon
subclass of: SO_0000010

position:222761:1
position: 222761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222943:1
position: 222943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222761-222943:1:exon

CCS41_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01060
old locus tag: CCS41_01065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGMSASSQRLRNLKGEGGISARLYSEARDKDFVQKLLGHKPSAMTNKYHDSRGSEWDEI
SIO_010081: CCS41_RS01060
subclass of: SO_0000673
so part of: CCS41_RS01060
location: 222761..222943
location: region:222761-222943:1
so has part: feature:222761-222943:1:exon

WP_072549982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222761-222943:1:exon

CCS41_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: yidA
locus tag: CCS41_RS01065
old locus tag: CCS41_01070
so part of: sequence
location: 223375..224187
location: region:223375-224187:1
so has part: feature:223375-224187:1:exon
subclass of: SO_0000010

position:223375:1
position: 223375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224187:1
position: 224187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223375-224187:1:exon

CCS41_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: yidA
locus tag: CCS41_RS01065
old locus tag: CCS41_01070
EC number: 3.1.3.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006707533.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar-phosphatase
translation: MAIKLIAIDMDGTLLDPHHTITPAVKQAIKKAQQKGIYVVLATGRSYIGVQKHLCELEMNNGHNYCVTSNGALVQKPATGECISQETLSFEDYLYFEGLARELGVHFHAVDFNSLYTANTDISKYTVHEVSLTGIPLKYCSVNDMDTRSRFPKVMMVDEPELLDRAIARIPAEVSERFTLMKSADHFLEILHKGANKGLGVQVLAEYLGIAQEDVMALGDQANDAAMIEYAGIGIAMGNAIPELKKIAQHITLSNAEDGVAYAIEKYALN
SIO_010081: CCS41_RS01065
subclass of: SO_0000673
so part of: CCS41_RS01065
location: 223375..224187
location: region:223375-224187:1
so has part: feature:223375-224187:1:exon

WP_119797029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223375-224187:1:exon

CCS41_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: ppiB
locus tag: CCS41_RS01070
old locus tag: CCS41_01075
so part of: sequence
location: 224276..224764
location: region:224276-224764:1
so has part: feature:224276-224764:1:exon
subclass of: SO_0000010

position:224276:1
position: 224276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224764:1
position: 224764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224276-224764:1:exon

CCS41_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: ppiB
locus tag: CCS41_RS01070
old locus tag: CCS41_01075
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:NP_459531.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase B
translation: MVTLHTNHGDIVINTFGGEASTTVENFLTYCRQGFYNGTIFHRVIDGFMIQGGGFEPGMAEKPTGTSIKNEANNGLKNARGTLAMARTNDPHSASSQFFINVVDNDFLNFRSENAGGWGYCVFAEVTEGLDVVDKIKSVKTGDRGMHQDVPEEDVIIKNVTV
SIO_010081: CCS41_RS01070
subclass of: SO_0000673
so part of: CCS41_RS01070
location: 224276..224764
location: region:224276-224764:1
so has part: feature:224276-224764:1:exon

WP_072549980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224276-224764:1:exon

CCS41_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01075
old locus tag: CCS41_01080
so part of: sequence
location: 224783..225535
location: region:224783-225535:1
so has part: feature:224783-225535:1:exon
subclass of: SO_0000010

position:224783:1
position: 224783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225535:1
position: 225535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224783-225535:1:exon

CCS41_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01075
old locus tag: CCS41_01080
EC number: 3.6.1.54
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705072.1
GO function: GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-2,3-diacylglucosamine diphosphatase
translation: MKTLFIADLHLSVQQPAITAGFMRFLQSEAIYADSLYILGDLFEAWIGDDDPNPLYRQVASALGSLQQQGIPCYFIHGNRDFLLGKDFAKESGMTLLAQEKVVTLYGRKILLLHGDTLCTDDIDYQRFRRKVQSPLIQKLFLWLPLGIRLHIAAKLRQHSQQSNTGKSETIMDVNQQAVIDTLQRNHVDWMIHGHTHRPAIHSVELPKTDLSTTNLPKMVAHRAVLGAWHEQGSMIEVTAETVELIPFPL
SIO_010081: CCS41_RS01075
subclass of: SO_0000673
so part of: CCS41_RS01075
location: 224783..225535
location: region:224783-225535:1
so has part: feature:224783-225535:1:exon

WP_072549979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224783-225535:1:exon

CCS41_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: purE
locus tag: CCS41_RS01080
old locus tag: CCS41_01085
so part of: sequence
location: 225770..226294
location: region:225770-226294:1
so has part: feature:225770-226294:1:exon
subclass of: SO_0000010

position:225770:1
position: 225770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226294:1
position: 226294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225770-226294:1:exon

CCS41_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: purE
locus tag: CCS41_RS01080
old locus tag: CCS41_01085
EC number: 4.1.1.21
EC number: 5.4.99.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002208569.1
GO component: GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO function: GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-(carboxyamino)imidazole ribonucleotide mutase
translation: MLANLNSAYPAGVKVAIVMGSKSDWSTMQCSAGLLTELEIPFYVEIVSAHRTPDRLFSFAEKAKEAGLHVIIAGAGGAAHLPGMLAAKTLVPVLGVPLPSTVLNGMDSLYSIVQMPRGVPVGTLAIGEAGAANAALLAAQILALHDKSIAERLTLWRKTQTEEVLNNATPRKNA
SIO_010081: CCS41_RS01080
subclass of: SO_0000673
so part of: CCS41_RS01080
location: 225770..226294
location: region:225770-226294:1
so has part: feature:225770-226294:1:exon

WP_072549978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225770-226294:1:exon

CCS41_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: purK
locus tag: CCS41_RS01085
old locus tag: CCS41_01090
so part of: sequence
location: 226291..227355
location: region:226291-227355:1
so has part: feature:226291-227355:1:exon
subclass of: SO_0000010

position:226291:1
position: 226291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227355:1
position: 227355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226291-227355:1:exon

CCS41_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: purK
locus tag: CCS41_RS01085
old locus tag: CCS41_01090
EC number: 6.3.4.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005158266.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-(carboxyamino)imidazole ribonucleotide synthase
translation: MKPVCVLGNGQLGRMLRQAGEPLGIAVYPVGLDAKPETVPYQESIITAEIERWPETALTKKLAEQETFVNRDIFPCLADRMRQKKLLDDLGLATAPWLLLENAEQCAEIFTTFSQFVIIKRRVGGYDGRGQWRLRQGEQCSLPQDVYGESIVEQGINFSAEVSLIGARSSKGKLVFYPLTDNLHEEGILRISVVRPQLNEKLQQKAETMLSTIMEKLNYIGVMAMECFIDGDNLLINELAPRVHNSGHWTQNGASISQFELHLRAILDLPLPKLVVNSPSVMVNLIGIPINPAWSSLPLVHLHWYEKEVRAGRKLGHLNLTDPDVKRLSGVLTKLAPLLPNEYQRSLSWAIQKL
SIO_010081: CCS41_RS01085
subclass of: SO_0000673
so part of: CCS41_RS01085
location: 226291..227355
location: region:226291-227355:1
so has part: feature:226291-227355:1:exon

WP_072549977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226291-227355:1:exon

CCS41_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01090
old locus tag: CCS41_01095
so part of: sequence
location: 227570..228484
location: region:227570-228484:1
so has part: feature:227570-228484:1:exon
subclass of: SO_0000010

position:227570:1
position: 227570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228484:1
position: 228484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227570-228484:1:exon

CCS41_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01090
old locus tag: CCS41_01095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004714639.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPFH domain-containing protein
translation: MLTAIPILIAIALIVMFGSVKIVPQGYQWTVERFGRYTKTLMPGLNIVVPFIDRIGRKINMMEQVLDIPSQEVISRDNANVAIDAVCFIQVIDPVKAAYEVSNLELAIVNLTMTNFRTVLGSMELDEMLSQRDNINSRLLHIVDEATNPWGIKITRIEIRDVRPPTELISAMNAQMKAERTKRADILEAEGVRQAAILRAEGEKQSQILKAEGERQSAFLQAEARERAAEAEARATKMVSEAIAAGDIQAINYFVAQKYTDALQHIGSANNSKVIMMPLEASNLMGAIGGISELIAESKNHRGK
SIO_010081: CCS41_RS01090
subclass of: SO_0000673
so part of: CCS41_RS01090
location: 227570..228484
location: region:227570-228484:1
so has part: feature:227570-228484:1:exon

WP_072549976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227570-228484:1:exon

CCS41_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01095
old locus tag: CCS41_01100
so part of: sequence
location: 228709..229047
location: region:228709-229047:1
so has part: feature:228709-229047:1:exon
subclass of: SO_0000010

position:228709:1
position: 228709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229047:1
position: 229047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228709-229047:1:exon

CCS41_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01095
old locus tag: CCS41_01100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209797.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YegP family protein
translation: MANGYYEIKKAKDGQFYFNLKAGNGEVILTSEMYRSKASALNGIASVQINSSGSEQYEQKRNVREEPYFVLKAKNHQIIGVSESYKSIDSVQKGIASVMNNGKTTDIRDRVS
SIO_010081: CCS41_RS01095
subclass of: SO_0000673
so part of: CCS41_RS01095
location: 228709..229047
location: region:228709-229047:1
so has part: feature:228709-229047:1:exon

WP_072549975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228709-229047:1:exon

CCS41_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: coaE
locus tag: CCS41_RS01100
old locus tag: CCS41_01105
so part of: sequence
location: 229071..229676
location: region:229071-229676:1
so has part: feature:229071-229676:1:exon
subclass of: SO_0000010

position:229071:1
position: 229071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229676:1
position: 229676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229071-229676:1:exon

CCS41_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: coaE
locus tag: CCS41_RS01100
old locus tag: CCS41_01105
EC number: 2.7.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004875551.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
note: Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dephospho-CoA kinase
translation: MTYIVALTGGICSGKSTVANVFARLGVPLVDADIIARQVVESGTTALSKIVARYGYHILLSDGSLNRAVLRQKIFSEQREKKWLNSLLHPLIRQETELRIASAKGPYVLWVVPLFVENGLCGKANRMLLVDVTPEIQLARAIVRDGITYQQAEQILASQASREQRLACADDVVDNSGEPATIIQSVTFLHKQYLELAAVFQ
SIO_010081: CCS41_RS01100
subclass of: SO_0000673
so part of: CCS41_RS01100
location: 229071..229676
location: region:229071-229676:1
so has part: feature:229071-229676:1:exon

WP_072549974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229071-229676:1:exon

CCS41_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: zapD
locus tag: CCS41_RS01105
old locus tag: CCS41_01110
so part of: sequence
location: 229688..230440
location: region:229688-230440:1
so has part: feature:229688-230440:1:exon
subclass of: SO_0000010

position:229688:1
position: 229688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230440:1
position: 230440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229688-230440:1:exon

CCS41_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: zapD
locus tag: CCS41_RS01105
old locus tag: CCS41_01110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019080502.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapD
translation: MSDFTSTRFFEYPLNERMRTWLRIEFLLQQLTGQKNLNNIASALIFFRTASDLIDVLERSEARTELLKELERQQKKLAQWVGAPNVDTTLINSLRDQLKDCAEVLMSTLRIGKSLKEDRLVNMVRQRLGIPCGCCSFDLPMLHLWLHLPLEQQSQYIDNLINSLIPLSQAVTMILDLIRQSGVLHAEESQNGFFQGNAYNADLLRLRIPLQYQLYPQVSGYKTRYSIRFLPLDSEKGIIPEYFGFELACC
SIO_010081: CCS41_RS01105
subclass of: SO_0000673
so part of: CCS41_RS01105
location: 229688..230440
location: region:229688-230440:1
so has part: feature:229688-230440:1:exon

WP_072549973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229688-230440:1:exon

CCS41_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: yacG
locus tag: CCS41_RS01110
old locus tag: CCS41_01115
so part of: sequence
location: 230686..230877
location: region:230686-230877:1
so has part: feature:230686-230877:1:exon
subclass of: SO_0000010

position:230686:1
position: 230686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230877:1
position: 230877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230686-230877:1:exon

CCS41_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: yacG
locus tag: CCS41_RS01110
old locus tag: CCS41_01115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209317.1
GO function: GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase inhibitor YacG
translation: MVLNEIQVHCPTCDKIVSWHKGRSPYRPFCSERCRLIDLGEWASGEKYIPSQEKVSESDEDQR
SIO_010081: CCS41_RS01110
subclass of: SO_0000673
so part of: CCS41_RS01110
location: 230686..230877
location: region:230686-230877:1
so has part: feature:230686-230877:1:exon

WP_072549972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230686-230877:1:exon

CCS41_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: truB
locus tag: CCS41_RS01115
old locus tag: CCS41_01120
so part of: sequence
location: complement(230970..231938)
location: region:230970-231938:-1
so has part: feature:230970-231938:-1:exon
subclass of: SO_0000010

position:230970:-1
position: 230970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231938:-1
position: 231938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230970-231938:-1:exon

CCS41_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: truB
locus tag: CCS41_RS01115
old locus tag: CCS41_01120
EC number: 5.4.99.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012004949.1
GO function: GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(55) synthase TruB
translation: MGRPRRRGRDINGILLLDKPAKLSSNDVLQKVKRIFAANRVGHTGALDPLATGMLPLCFGEATKFSQFLLNSDKRYRVVARLGQRTDTSDAEGLVITERKPIFTQIQLEEALQRFLGDSLQIPSMYSALKYQGKPLYQYARQGIEIEREARTITVFDLQLIRREEYSLELEIHCSKGTYIRTIIDDLGELLGCGAHVSQLRRLQVATYPYQRMVTLEQLSMLIESEKIESTQTELAGQYSPYQALDTLLLPMESAVLHFPEVNLLPIVAAYVKQGQPVQASTAPSAGMVRITEGTEHHFIGIGIIDDNGRVAPKRLIVERTD
SIO_010081: CCS41_RS01115
subclass of: SO_0000673
so part of: CCS41_RS01115
location: complement(230970..231938)
location: region:230970-231938:-1
so has part: feature:230970-231938:-1:exon

WP_072549971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230970-231938:-1:exon

CCS41_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rbfA
locus tag: CCS41_RS01120
old locus tag: CCS41_01125
so part of: sequence
location: complement(231938..232372)
location: region:231938-232372:-1
so has part: feature:231938-232372:-1:exon
subclass of: SO_0000010

position:232372:-1
position: 232372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231938-232372:-1:exon

CCS41_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rbfA
locus tag: CCS41_RS01120
old locus tag: CCS41_01125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015836104.1
GO function: GO:0019843 - rRNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosome-binding factor RbfA
translation: MAKEFSRAQRVAQELQKEIAIILQREIKDPRIGMVTVSSVEVSRDLVYAKVFVTFLNMLTENADPKTVTNGITVLQDASGYIRSLLGKAMRLRVVPELTFAYDSSLVEGMRISNLVTDVVKKDAERRDHQHHNGERHNDGSEET
SIO_010081: CCS41_RS01120
subclass of: SO_0000673
so part of: CCS41_RS01120
location: complement(231938..232372)
location: region:231938-232372:-1
so has part: feature:231938-232372:-1:exon

WP_072549970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231938-232372:-1:exon

CCS41_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: infB
locus tag: CCS41_RS01125
old locus tag: CCS41_01130
so part of: sequence
location: complement(232481..235081)
location: region:232481-235081:-1
so has part: feature:232481-235081:-1:exon
subclass of: SO_0000010

position:232481:-1
position: 232481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235081:-1
position: 235081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232481-235081:-1:exon

CCS41_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: infB
locus tag: CCS41_RS01125
old locus tag: CCS41_01130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002223151.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-2
translation: MTDVTIKSLATEIQTPVERLVAHFAAAGINKSETDSVTQQEKETLLAYLKREHGSAPNKLTLQRKIRSTLSIPSTGGKNKSVQIEVRKKRTYINTSETEPVKAEEQTKSVTEIEAQKVTEGKAKQAMEKEKLTRQASSSKKNNPVQSEKARREIEAAELKRSVEQETYRKVEENAKHVAEEARKMAAENEGKWSEPVDDQAESADYHVTTSQHARAAEDENDAKVEGDRRSRSRSGKAAKQKKGNKLFESKADREEARAVGRKNKRKPSTLQQGFNRPVVAVNRDVIIGETLSVAELANKMAVKGSQVIKVMMKLGAMATINQIIDQETAQLVAEEMGHKVILRRENELEEALMSDRDTGVAAESRAPVVTIMGHVDHGKTSLLDSIRSTKVAAGEAGGITQHIGAYHVEIENGMVTFLDTPGHAAFTSMRARGAKATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPERVKTELSQHGIQPEEWGGDCQFIHVSAKAGTGIDELLNAILLQAEVLELNAIHSGMASGVVIESFLDKGRGPVATVLVQEGTLNKGDIVLCGFEYGRIRAMRDELGRAILSAGPSIPVEILGLSSVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFTNMTEGEISELNIVLKSDVQGSCEAICDALKQLSTDEVKVKIVGSGVGGITETDATLAAASNAIIIGFNVRADASARRVIDSESLDLRYYSVIYSLIDEIKQAMSGMLAPEYKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGMIKRSSPIRVLRNNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVCAGDMIEVFETIEIKRTIA
SIO_010081: CCS41_RS01125
subclass of: SO_0000673
so part of: CCS41_RS01125
location: complement(232481..235081)
location: region:232481-235081:-1
so has part: feature:232481-235081:-1:exon

WP_072549969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232481-235081:-1:exon

CCS41_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: nusA
locus tag: CCS41_RS01130
old locus tag: CCS41_01135
pseudo: true
so part of: sequence
location: complement(235103..236628)
location: region:235103-236628:-1
so has part: feature:235103-236628:-1:exon
subclass of: SO_0000010

position:235103:-1
position: 235103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236628:-1
position: 236628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235103-236628:-1:exon

CCS41_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: nusA
locus tag: CCS41_RS01130
old locus tag: CCS41_01135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009114444.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transcription termination factor NusA
SIO_010081: CCS41_RS01130
subclass of: SO_0000673
so part of: CCS41_RS01130
location: complement(235103..236628)
location: region:235103-236628:-1
so has part: feature:235103-236628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235103-236628:-1:exon

CCS41_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rimP
locus tag: CCS41_RS01135
old locus tag: CCS41_01140
so part of: sequence
location: complement(236650..237105)
location: region:236650-237105:-1
so has part: feature:236650-237105:-1:exon
subclass of: SO_0000010

position:236650:-1
position: 236650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237105:-1
position: 237105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236650-237105:-1:exon

CCS41_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rimP
locus tag: CCS41_RS01135
old locus tag: CCS41_01140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1
GO process: GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome maturation factor RimP
translation: MSTFEQKLTEIISAPVEALGHELVGIEFIRGRQSTLRIYIDNKKDGITVDVCADVSHQVSAILDIEDPITVAYNLEVSSPGLDRPLFRAEHYTCYLGKKISLVLRMAMQNRRKWQGIIKTVEGEMITVTVDGKDEVFALSNIQKANLVPHF
SIO_010081: CCS41_RS01135
subclass of: SO_0000673
so part of: CCS41_RS01135
location: complement(236650..237105)
location: region:236650-237105:-1
so has part: feature:236650-237105:-1:exon

WP_162859943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236650-237105:-1:exon

CCS41_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01140
old locus tag: CCS41_01145
so part of: sequence
location: complement(237366..237442)
location: region:237366-237442:-1
so has part: feature:237366-237442:-1:exon
subclass of: SO_0000663

position:237366:-1
position: 237366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237442:-1
position: 237442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237366-237442:-1:exon

CCS41_RS01140
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS01140
old locus tag: CCS41_01145
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(237406..237408),aa:Met,seq:cat)
SIO_010081: CCS41_RS01140
subclass of: SO_0000673
so part of: CCS41_RS01140
location: complement(237366..237442)
location: region:237366-237442:-1
so has part: feature:237366-237442:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237366-237442:-1:exon

CCS41_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01145
old locus tag: CCS41_01150
so part of: sequence
location: complement(237503..237589)
location: region:237503-237589:-1
so has part: feature:237503-237589:-1:exon
subclass of: SO_0000663

position:237503:-1
position: 237503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237589:-1
position: 237589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237503-237589:-1:exon

CCS41_RS01145
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS01145
old locus tag: CCS41_01150
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(237553..237555),aa:Leu,seq:gag)
SIO_010081: CCS41_RS01145
subclass of: SO_0000673
so part of: CCS41_RS01145
location: complement(237503..237589)
location: region:237503-237589:-1
so has part: feature:237503-237589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237503-237589:-1:exon

CCS41_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: secG
locus tag: CCS41_RS01150
old locus tag: CCS41_01155
so part of: sequence
location: complement(237629..237955)
location: region:237629-237955:-1
so has part: feature:237629-237955:-1:exon
subclass of: SO_0000010

position:237629:-1
position: 237629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237955:-1
position: 237955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237629-237955:-1:exon

CCS41_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: secG
locus tag: CCS41_RS01150
old locus tag: CCS41_01155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015670611.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecG
translation: MYEALLVFFLLIAMGLVALIMLQQGKGADVGASFGAGASATLFGSNGSGNFMTRMTAILATLFFVVSLILGNMSTEQHHKGSEWENLGQPAKNEQADTPPKPGNDIPQ
SIO_010081: CCS41_RS01150
subclass of: SO_0000673
so part of: CCS41_RS01150
location: complement(237629..237955)
location: region:237629-237955:-1
so has part: feature:237629-237955:-1:exon

WP_072549966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237629-237955:-1:exon

CCS41_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: glmM
locus tag: CCS41_RS01155
old locus tag: CCS41_01160
so part of: sequence
location: complement(238150..239493)
location: region:238150-239493:-1
so has part: feature:238150-239493:-1:exon
subclass of: SO_0000010

position:238150:-1
position: 238150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239493:-1
position: 239493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238150-239493:-1:exon

CCS41_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: glmM
locus tag: CCS41_RS01155
old locus tag: CCS41_01160
EC number: 5.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013649145.1
GO function: GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglucosamine mutase
translation: MSNRKYFGTDGIRGKVGNKPITPDFVLKLGWAAGKVLARQHGSRKIIIGKDTRISGYMLESALEAGLSAAGLSAAFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFDDNGIKFFSIDGKKLPDNVEAAIETAMEEPLTCVPSAELGKASRIVDAAGRYIEFCKGTFPSELSLNNLTIVVDCAHGATYHIAPSVLRELGATVIPIGCEPDGMNINEKCGATDTRMLQKQVRAKKADVGLAFDGDGDRLIMVDNLGNKVDGDQIIYIIANEELNQGQLKGGVVGTLMSNMGLELALKQRSIPFTRAKVGDRYVLKKMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQILAAMVRNNKSLYDLCRDMQLWPQVLVNVHFSGDHNPLESAEVTEITQQVETELAGQGRVLLRKSGTEPLIRIMVEGNKDEETIKSLADRITKVVKTVG
SIO_010081: CCS41_RS01155
subclass of: SO_0000673
so part of: CCS41_RS01155
location: complement(238150..239493)
location: region:238150-239493:-1
so has part: feature:238150-239493:-1:exon

WP_072549965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238150-239493:-1:exon

CCS41_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: folP
locus tag: CCS41_RS01160
old locus tag: CCS41_01165
so part of: sequence
location: complement(239502..240347)
location: region:239502-240347:-1
so has part: feature:239502-240347:-1:exon
subclass of: SO_0000010

position:239502:-1
position: 239502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240347:-1
position: 240347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239502-240347:-1:exon

CCS41_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: folP
locus tag: CCS41_RS01160
old locus tag: CCS41_01165
EC number: 2.5.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004699912.1
GO function: GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydropteroate synthase
translation: MQLTARNLTLDLCQPQVMGILNVTPDSFSDGGQHNDLDKALKHAQAMITAGATLIDIGGESTRPGAKSVSEQEELDRVIPVVEHLAPLATDLKIWLSVDTYKAQVITEAAKAGAHLINDVRALQGLGALEAAASTDLPICLMHMQGNPKHMQQSPHYEDLLTEIDDFFQQRIDSCIAAGIAKNKLLLDPGFGFGKTLAHNYRLLTHLEKFHHFNLPLLVGMSRKSMVGQMLLGVPPKQRVTGSVACAVIAAMSGAKIIRVHDVQETVEAMCIVRAALSEKE
SIO_010081: CCS41_RS01160
subclass of: SO_0000673
so part of: CCS41_RS01160
location: complement(239502..240347)
location: region:239502-240347:-1
so has part: feature:239502-240347:-1:exon

WP_072549964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239502-240347:-1:exon

CCS41_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01165
old locus tag: CCS41_01170
so part of: sequence
location: complement(240767..240843)
location: region:240767-240843:-1
so has part: feature:240767-240843:-1:exon
subclass of: SO_0000663

position:240767:-1
position: 240767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240843:-1
position: 240843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240767-240843:-1:exon

CCS41_RS01165
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS01165
old locus tag: CCS41_01170
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(240807..240809),aa:Met,seq:cat)
SIO_010081: CCS41_RS01165
subclass of: SO_0000673
so part of: CCS41_RS01165
location: complement(240767..240843)
location: region:240767-240843:-1
so has part: feature:240767-240843:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240767-240843:-1:exon

CCS41_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01170
old locus tag: CCS41_01175
so part of: sequence
location: complement(240908..240984)
location: region:240908-240984:-1
so has part: feature:240908-240984:-1:exon
subclass of: SO_0000663

position:240908:-1
position: 240908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240984:-1
position: 240984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240908-240984:-1:exon

CCS41_RS01170
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS01170
old locus tag: CCS41_01175
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(240948..240950),aa:Met,seq:cat)
SIO_010081: CCS41_RS01170
subclass of: SO_0000673
so part of: CCS41_RS01170
location: complement(240908..240984)
location: region:240908-240984:-1
so has part: feature:240908-240984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240908-240984:-1:exon

CCS41_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: mltA
locus tag: CCS41_RS01175
old locus tag: CCS41_01180
pseudo: true
so part of: sequence
location: 241192..>242271
location: region:241192-242271:1
so has part: feature:241192-242271:1:exon
subclass of: SO_0000010

position:241192:1
position: 241192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242271:1
position: 242271
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241192-242271:1:exon

CCS41_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: mltA
locus tag: CCS41_RS01175
old locus tag: CCS41_01180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883639.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0009254 - peptidoglycan turnover [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: murein transglycosylase A
SIO_010081: CCS41_RS01175
subclass of: SO_0000673
so part of: CCS41_RS01175
location: 241192..>242271
location: region:241192-242271:1
so has part: feature:241192-242271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241192-242271:1:exon

CCS41_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: tcdA
locus tag: CCS41_RS01180
old locus tag: CCS41_01185
so part of: sequence
location: 242271..243089
location: region:242271-243089:1
so has part: feature:242271-243089:1:exon
subclass of: SO_0000010

position:243089:1
position: 243089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242271-243089:1:exon

CCS41_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: tcdA
locus tag: CCS41_RS01180
old locus tag: CCS41_01185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009638328.1
GO function: GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
translation: MTDQFYNEVDQDRFGGIARLYGQQAQALFSRVHVCVIGIGGVGSWAAEALARTGIGTITLVDMDDVCITNTNRQNHALRQNIGQVKTAVMEQRILAINPKCQVHCIYNFVTPDNVVDILDRNFSYVIDAIDSVRPKAALLAHCRRYKIPVVTTGGAGGQIDPTRIMVVDLAKTIRDPLAAKLRERLKYNFNIVKNSKGKLRIDCVSSSEPLMYPQIDGSVCPSRPSATGTKRMDCTTELGASTMVTATFGFIAVAHVLKKMIAKSMREAEAK
SIO_010081: CCS41_RS01180
subclass of: SO_0000673
so part of: CCS41_RS01180
location: 242271..243089
location: region:242271-243089:1
so has part: feature:242271-243089:1:exon

WP_072549963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242271-243089:1:exon

CCS41_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01185
old locus tag: CCS41_01190
so part of: sequence
location: complement(243347..243553)
location: region:243347-243553:-1
so has part: feature:243347-243553:-1:exon
subclass of: SO_0000010

position:243347:-1
position: 243347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243553:-1
position: 243553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243347-243553:-1:exon

CCS41_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01185
old locus tag: CCS41_01190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapB
translation: MAFEVFEKLEAKVQQTIDTITLLKMEIEELKEQNRTQAEKNEQLKREEHVLQERLGQLLSKIEGVEEI
SIO_010081: CCS41_RS01185
subclass of: SO_0000673
so part of: CCS41_RS01185
location: complement(243347..243553)
location: region:243347-243553:-1
so has part: feature:243347-243553:-1:exon

WP_072549962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243347-243553:-1:exon

CCS41_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01190
old locus tag: CCS41_01195
so part of: sequence
location: 244060..244887
location: region:244060-244887:1
so has part: feature:244060-244887:1:exon
subclass of: SO_0000010

position:244060:1
position: 244060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244887:1
position: 244887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244060-244887:1:exon

CCS41_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01190
old locus tag: CCS41_01195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015379417.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MIP/aquaporin family protein
translation: MSETSPALKNQCIAEFLGTALLIFFGVGCVASLKLAGASFSQWEVSVIWGMGVAMAIYLTAAISGAHLNPAVTVALWLFACFERHKVIPYVLAQIAGAFCGAAVVYGMYYNLFIDFEQTHHILRGSTENLDLAAIFSTYPNPHLSVLQAFIVETIITAILMCMILALTDDGNGIPRGPLAPLLIGILIAVIGASVGSLTGFALNPARDFGAKIFAYLAGWGDIVFTGGRDIPYFLVPIFAPIVGALLGALVYRALIGRHLPLCYICQEEKKPPAQ
SIO_010081: CCS41_RS01190
subclass of: SO_0000673
so part of: CCS41_RS01190
location: 244060..244887
location: region:244060-244887:1
so has part: feature:244060-244887:1:exon

WP_072549961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244060-244887:1:exon

CCS41_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: glpK
locus tag: CCS41_RS01195
old locus tag: CCS41_01200
so part of: sequence
location: 244928..246463
location: region:244928-246463:1
so has part: feature:244928-246463:1:exon
subclass of: SO_0000010

position:244928:1
position: 244928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246463:1
position: 246463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244928-246463:1:exon

CCS41_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: glpK
locus tag: CCS41_RS01195
old locus tag: CCS41_01200
EC number: 2.7.1.30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004719540.1
GO function: GO:0004370 - glycerol kinase activity [Evidence IEA]
GO process: GO:0006071 - glycerol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol kinase GlpK
translation: MTTDNITEKKYIVALDQGTTSSRAIVLDHDTNIIGISQRELSQIYPKAGWVEHDPMQIWATQSSTLVEVLAKTDISPCQIAGIGITNQRETTIVWEKDTGKPIYNAIVWQCRRTADICEELKRKSGLEKKIRDKTGLIVDPYFSGTKLKWILDNVEGARKRAEAGELLFGTVDTWLVWKMTQGQGQDQLHITDYTNASRTMMFNIHEKKWDSELLAALDIPEEMLPEVRHSSEIYGKTSIGGEGNTSIAIAGIAGDQQAALFGQLCVQPGMAKNTYGTGCFLLMNTGIKAEQSNHGLLTTIACGAKGEINYALEGAVFIGGAAIQWLRDELKFIIDPEDSEYFANKVKDSNGVYVVPAFTGLGAPYWDPYARGAIFGMTRGVNRSHIIRATLESIAYQTRDVLEAMQADADTQLKFLRVDGGAVANNFLMQFQADILGTSVDRPAVCESTALGAAFLAGLSTEFWQDLEEVKSKAPTERQFRPNMKVTEREALYNGWKKAVARAQSWEEHD
SIO_010081: CCS41_RS01195
subclass of: SO_0000673
so part of: CCS41_RS01195
location: 244928..246463
location: region:244928-246463:1
so has part: feature:244928-246463:1:exon

WP_072549960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244928-246463:1:exon

CCS41_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: emrD
locus tag: CCS41_RS01200
old locus tag: CCS41_01205
so part of: sequence
location: complement(246513..247691)
location: region:246513-247691:-1
so has part: feature:246513-247691:-1:exon
subclass of: SO_0000010

position:246513:-1
position: 246513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247691:-1
position: 247691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246513-247691:-1:exon

CCS41_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: emrD
locus tag: CCS41_RS01200
old locus tag: CCS41_01205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017894419.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO process: GO:0042908 - xenobiotic transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multidrug efflux MFS transporter EmrD
translation: MRKIENFHLLIMLIMLIAVGQMAQTIYVPVIAEIAHHFSVRTGVVQRVMSAYLLTYGCSQLLYGPLSDRIGRRPVILVGMMIFICGALGALLANSLSILVLASALQGMGTGVAGVMARTMPRDLYAGTTLRYANSLLNMGILVSPLLAPLIGGVLASWFGWRACYAFLLLLCSVVAYCMFRWLPETRPQQTEKQRMLASFYRLLSNGLFSRYLVMLIGALAGIAVFEASVGVLMSGVLGLSSIKVSILFILPIPAAFLGAWYAGRDNKTFYSLMWYAVISCLLAGLMMWIPSWFGIMNVWTLLVPAALFFFAAGMLFPLATTGAMEPFPYLAGATGALVGGLQNVGSGLATGLSAMLPQTGQFSLGLLMFSMATLILLCWLPLAKRIRQQEG
SIO_010081: CCS41_RS01200
subclass of: SO_0000673
so part of: CCS41_RS01200
location: complement(246513..247691)
location: region:246513-247691:-1
so has part: feature:246513-247691:-1:exon

WP_072549959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246513-247691:-1:exon

CCS41_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: tusA
locus tag: CCS41_RS01205
old locus tag: CCS41_01210
so part of: sequence
location: complement(247778..248050)
location: region:247778-248050:-1
so has part: feature:247778-248050:-1:exon
subclass of: SO_0000010

position:247778:-1
position: 247778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248050:-1
position: 248050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247778-248050:-1:exon

CCS41_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: tusA
locus tag: CCS41_RS01205
old locus tag: CCS41_01210
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004714285.1
GO function: GO:0097163 - sulfur carrier activity [Evidence IEA]
GO process: GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA
translation: MADPFANPDKVINTLGMRCPEPVMMVRKTVRHMDCGQTLLIIADDPATTRDIPGFCRFMEHQLLAQHTEQLPYRYLVRKGIIANKCPLTS
SIO_010081: CCS41_RS01205
subclass of: SO_0000673
so part of: CCS41_RS01205
location: complement(247778..248050)
location: region:247778-248050:-1
so has part: feature:247778-248050:-1:exon

WP_072549958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247778-248050:-1:exon

CCS41_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rdgC
locus tag: CCS41_RS01210
old locus tag: CCS41_01215
so part of: sequence
location: complement(248139..249068)
location: region:248139-249068:-1
so has part: feature:248139-249068:-1:exon
subclass of: SO_0000010

position:248139:-1
position: 248139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249068:-1
position: 249068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248139-249068:-1:exon

CCS41_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rdgC
locus tag: CCS41_RS01210
old locus tag: CCS41_01215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005274890.1
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination-associated protein RdgC
translation: MPWFKNLMIYRLKQQTSLPAEQMEKQLSNFSFIPCSSQDITKMGWISPMGTRSNALVHHARGQIFICAAREEKIIPSTVVKRELKTKIDHFETEKQRKIKKTEKESLKDEVLHGLLPRAFSRFDQTLLWIDTINNLIMVNTASAKRAEDILALLRKSLGSLPVVPLTLKNPVELTLTEWVRSENLPANFTLMYEAELKASGEDGGLIRCKQQDLASNEIAAHIEAGKRVTKLALNWREKIQFVLGNDGSLKRLKFVDTLHKQNDDIDNKDFAQRFAADCILMTDELAVLIQNMIEALGGLAIAPDNDWK
SIO_010081: CCS41_RS01210
subclass of: SO_0000673
so part of: CCS41_RS01210
location: complement(248139..249068)
location: region:248139-249068:-1
so has part: feature:248139-249068:-1:exon

WP_072549957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248139-249068:-1:exon

CCS41_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01215
old locus tag: CCS41_01220
so part of: sequence
location: 249938..250744
location: region:249938-250744:1
so has part: feature:249938-250744:1:exon
subclass of: SO_0000010

position:249938:1
position: 249938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250744:1
position: 250744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249938-250744:1:exon

CCS41_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01215
old locus tag: CCS41_01220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704376.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MAEINQPTSMSGAQSCPTDLSLQLISLCDSSSDPWAIKDNQSRYLYGNDAYMALLNLKKGFNIKYLTDKQIPHDSAGSALYFEELDRKVQESKQHVFSLNIYPFGTEEIIQPYICEKSPFYSEDGKCMGVILHAKKLQVFSAIQYLNKTLFNVEKKLDLTKDPSLEVNPVSDDINCNLFTDKELEVIFFLQQKKPKPLTSKAIAEILGLSCRTVENKLCSMYRKAKVCTSGEFKEYCKKNGFDKYNQSKSTTLPSDIFISTTNRCSLR
SIO_010081: CCS41_RS01215
subclass of: SO_0000673
so part of: CCS41_RS01215
location: 249938..250744
location: region:249938-250744:1
so has part: feature:249938-250744:1:exon

WP_072549956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249938-250744:1:exon

CCS41_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: pckA
locus tag: CCS41_RS01220
old locus tag: CCS41_01225
so part of: sequence
location: complement(250858..252486)
location: region:250858-252486:-1
so has part: feature:250858-252486:-1:exon
subclass of: SO_0000010

position:250858:-1
position: 250858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252486:-1
position: 252486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250858-252486:-1:exon

CCS41_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: pckA
locus tag: CCS41_RS01220
old locus tag: CCS41_01225
EC number: 4.1.1.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002394031.1
GO function: GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate carboxykinase (ATP)
translation: MKFEGITSQELATYGIENVDEIVYNPSYTLLFEEETSSGLEGYERGTVTSSGAVAVDTGIFTGRSPKDKYIVRDDITNDTLWWADRNKGKNDNKPLSQETWQHLKGLVTQQLSGKRLFVVDAFCGANRKSRLQVRFITEVAWQAHFVKNMFIRPSDEELAQFKADFIVMNGAKCTNPQWRKQQLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSIMNYLLPLQGIASMHCSANVGKKGDVAVFFGLSGTGKTTLSTDPKRELIGDDEHGWDDDGVFNFEGGCYAKTINLSVEAEPDIYHAIKRDALLENVGVQANAQVDFNDSSKTENTRVSYPIYHIKNIVKPISKAGHAKKVIFLTADAFGVLPPVSRLNTDQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLLLHPTQYAEVLVKRMQAVGAQAYLVNTGWNGRGERISIKDTRAIIDAILNGEIDKITNFTTLPIFNLEIPETLQGVDPLILDPRNTHISYEKWQQEAEDLARRFIVNFDKYTDTAAGEALLSAAGPKLG
SIO_010081: CCS41_RS01220
subclass of: SO_0000673
so part of: CCS41_RS01220
location: complement(250858..252486)
location: region:250858-252486:-1
so has part: feature:250858-252486:-1:exon

WP_072549955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250858-252486:-1:exon

CCS41_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: pyrE
locus tag: CCS41_RS01225
old locus tag: CCS41_01230
so part of: sequence
location: complement(252598..253245)
location: region:252598-253245:-1
so has part: feature:252598-253245:-1:exon
subclass of: SO_0000010

position:252598:-1
position: 252598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253245:-1
position: 253245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252598-253245:-1:exon

CCS41_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: pyrE
locus tag: CCS41_RS01225
old locus tag: CCS41_01230
EC number: 2.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011815272.1
GO function: GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: orotate phosphoribosyltransferase
translation: MQDYQRDFIEFSLRKQVLKFGEFNLKSGRVSPYFFNAGLFNTGKDLAELGRFYATALMNSNIQFDLVFGPAYKGIPIATATTVALANDHKRDVPYCFNRKETKDHGEGGRLVGSPLQGRVMLIDDVITAGTAIREAMAVIAAHNASLAGVMVSLDRQERGNSEMSAIQEVEQNYHCQVISIVTLDDLISYLKEKPEMTDNWSAVENYRKKYGIVS
SIO_010081: CCS41_RS01225
subclass of: SO_0000673
so part of: CCS41_RS01225
location: complement(252598..253245)
location: region:252598-253245:-1
so has part: feature:252598-253245:-1:exon

WP_072549954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252598-253245:-1:exon

CCS41_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rph
locus tag: CCS41_RS01230
old locus tag: CCS41_01235
pseudo: true
so part of: sequence
location: complement(253430..>254089)
location: region:253430-254089:-1
so has part: feature:253430-254089:-1:exon
subclass of: SO_0000010

position:253430:-1
position: 253430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254089:-1
position: 254089
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253430-254089:-1:exon

CCS41_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rph
locus tag: CCS41_RS01230
old locus tag: CCS41_01235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013577632.1
GO function: GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ribonuclease PH
SIO_010081: CCS41_RS01230
subclass of: SO_0000673
so part of: CCS41_RS01230
location: complement(253430..>254089)
location: region:253430-254089:-1
so has part: feature:253430-254089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253430-254089:-1:exon

CCS41_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: cysS
locus tag: CCS41_RS01235
old locus tag: CCS41_01240
so part of: sequence
location: complement(254207..255592)
location: region:254207-255592:-1
so has part: feature:254207-255592:-1:exon
subclass of: SO_0000010

position:254207:-1
position: 254207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255592:-1
position: 255592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254207-255592:-1:exon

CCS41_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: cysS
locus tag: CCS41_RS01235
old locus tag: CCS41_01240
EC number: 6.1.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002222677.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine--tRNA ligase
translation: MLKIFNTLSREKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVSFDVIARYLRYLGYSLIYVRNVTDIDDKIIKRAAKNNESCQQLTTRMLAEMHHDFEALNLLPPDKEPRATHHIAEIIVLIQKLIERQHAYIAANGDVIFAVDSAPDYGLLSRQDLEQLQAGARVEIADVKRNPMDFILWKMSNPGDPSWESPWGKGRPGWHIECSAMNSKQLGTHFDIHGGGADLMFPHHENEIAQSTCAHGGSYVNYWMHTGMVMIDKNKMSKSLNNFFTIRDLLTNYDAETVRYFLMSAHYRSQLHYNAENLKLAHTALERLYIALRGTDANAVAAGGEDFVTRFRDAMDDDFNTPEAYSVLFDIAREVNRLKKKDHAAASGLATELRNMASVLGLLTRDPEHFLQNGEQIDNHTIAKIDALIQQRDTARSNKNWALADSARRQLDEMNVVLEDRPQGTTWRRK
SIO_010081: CCS41_RS01235
subclass of: SO_0000673
so part of: CCS41_RS01235
location: complement(254207..255592)
location: region:254207-255592:-1
so has part: feature:254207-255592:-1:exon

WP_072549953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254207-255592:-1:exon

CCS41_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rplI
locus tag: CCS41_RS01240
old locus tag: CCS41_01245
so part of: sequence
location: complement(255803..256273)
location: region:255803-256273:-1
so has part: feature:255803-256273:-1:exon
subclass of: SO_0000010

position:255803:-1
position: 255803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256273:-1
position: 256273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255803-256273:-1:exon

CCS41_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rplI
locus tag: CCS41_RS01240
old locus tag: CCS41_01245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L9
translation: MEVILLEEVKINEVKKLGILGDKVNVKTGYARNFLIPQGKAVQATKKNIENFDTLRARMEAELAKNQAKARDRVDEFEKLGNVTLEAKVGANDKLFGSIGSNDIAQAITTAGVPVSKKEVRLKDKLAIRSLGVHEIHIQVAQDVSARLTVTVVAQE
SIO_010081: CCS41_RS01240
subclass of: SO_0000673
so part of: CCS41_RS01240
location: complement(255803..256273)
location: region:255803-256273:-1
so has part: feature:255803-256273:-1:exon

WP_072549952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255803-256273:-1:exon

CCS41_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rpsR
locus tag: CCS41_RS01245
old locus tag: CCS41_01250
so part of: sequence
location: complement(256313..256543)
location: region:256313-256543:-1
so has part: feature:256313-256543:-1:exon
subclass of: SO_0000010

position:256313:-1
position: 256313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256543:-1
position: 256543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256313-256543:-1:exon

CCS41_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rpsR
locus tag: CCS41_RS01245
old locus tag: CCS41_01250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S18
translation: MSRHYYRRRKYCRFTAEGIKKIDYKDISMLKNYITESGKIVPSRITGTRAKFQRQLASAIKLARYLSLLPYTDSHQ
SIO_010081: CCS41_RS01245
subclass of: SO_0000673
so part of: CCS41_RS01245
location: complement(256313..256543)
location: region:256313-256543:-1
so has part: feature:256313-256543:-1:exon

WP_072549951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256313-256543:-1:exon

CCS41_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: priB
locus tag: CCS41_RS01250
old locus tag: CCS41_01255
so part of: sequence
location: complement(256548..256868)
location: region:256548-256868:-1
so has part: feature:256548-256868:-1:exon
subclass of: SO_0000010

position:256548:-1
position: 256548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256868:-1
position: 256868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256548-256868:-1:exon

CCS41_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: priB
locus tag: CCS41_RS01250
old locus tag: CCS41_01255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009111556.1
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primosomal replication protein N
translation: MAIINRVVLSGIVCKFPIRNVSPAGIPHCQFVLEHRSQQQEAGLSRQTWCHMPVIVSGHRSHALTHSITVGIQLTMQGFISCHQGRNGLNKLVLHAEQIELINSGD
SIO_010081: CCS41_RS01250
subclass of: SO_0000673
so part of: CCS41_RS01250
location: complement(256548..256868)
location: region:256548-256868:-1
so has part: feature:256548-256868:-1:exon

WP_119797030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256548-256868:-1:exon

CCS41_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rpsF
locus tag: CCS41_RS01255
old locus tag: CCS41_01260
so part of: sequence
location: complement(256874..257266)
location: region:256874-257266:-1
so has part: feature:256874-257266:-1:exon
subclass of: SO_0000010

position:256874:-1
position: 256874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257266:-1
position: 257266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256874-257266:-1:exon

CCS41_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rpsF
locus tag: CCS41_RS01255
old locus tag: CCS41_01260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S6
translation: MRHYEIIFMVHPDQSEQVPGMIERYSAIIAKAAGQIHRLEDWGRRQLAYPINKLHKAHYVLLNVEAPQETINELETNFRFNDAVIRNMVMRVKNAVTEASPMTKAKDERRERPDFAIENNDEADVGDPEE
SIO_010081: CCS41_RS01255
subclass of: SO_0000673
so part of: CCS41_RS01255
location: complement(256874..257266)
location: region:256874-257266:-1
so has part: feature:256874-257266:-1:exon

WP_072549950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256874-257266:-1:exon

CCS41_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: prmA
locus tag: CCS41_RS01260
old locus tag: CCS41_01265
so part of: sequence
location: complement(257412..258335)
location: region:257412-258335:-1
so has part: feature:257412-258335:-1:exon
subclass of: SO_0000010

position:257412:-1
position: 257412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258335:-1
position: 258335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257412-258335:-1:exon

CCS41_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: prmA
locus tag: CCS41_RS01260
old locus tag: CCS41_01265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005163101.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11 methyltransferase
translation: MPWIQLKINTSSDHAESLSNTLLENGALAITFQDTYDNPIFEPLPGETRLWGNTDVIGLYDAETDMAKIIAALAGQDRFNKNFIHKIEQIEDKDWEREWMDNFHPMCFGQRLWICPSWKDIPDPNAVNVMLDPGLAFGTGTHPTTSLCLQWLDGLDLTDKTVIDFGCGSGILAIAALKLGAVRAIGIDIDPQAIQASRDNAQRNGVAENLELYLAKDQPADLSADVVVANILAAPLRELAPLINTLSCGHLGLSGVLASQALTVAQAYQGSFILDPVVEKEGWCRITGIKNNYCEFVSTQVANGDPE
SIO_010081: CCS41_RS01260
subclass of: SO_0000673
so part of: CCS41_RS01260
location: complement(257412..258335)
location: region:257412-258335:-1
so has part: feature:257412-258335:-1:exon

WP_072549949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257412-258335:-1:exon

CCS41_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: panF
locus tag: CCS41_RS01265
old locus tag: CCS41_01270
pseudo: true
so part of: sequence
location: complement(258397..259850)
location: region:258397-259850:-1
so has part: feature:258397-259850:-1:exon
subclass of: SO_0000010

position:258397:-1
position: 258397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259850:-1
position: 259850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258397-259850:-1:exon

CCS41_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: panF
locus tag: CCS41_RS01265
old locus tag: CCS41_01270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210065.1
GO function: GO:0015498 - pantothenate:sodium symporter activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015887 - pantothenate transmembrane transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sodium/pantothenate symporter
SIO_010081: CCS41_RS01265
subclass of: SO_0000673
so part of: CCS41_RS01265
location: complement(258397..259850)
location: region:258397-259850:-1
so has part: feature:258397-259850:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258397-259850:-1:exon

CCS41_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01270
old locus tag: CCS41_01275
so part of: sequence
location: complement(259840..260082)
location: region:259840-260082:-1
so has part: feature:259840-260082:-1:exon
subclass of: SO_0000010

position:259840:-1
position: 259840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260082:-1
position: 260082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259840-260082:-1:exon

CCS41_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01270
old locus tag: CCS41_01275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004392391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhdT family protein
translation: MDERFVQAHKEARWAFTLTLAYLVGWILSAYWPDDSIGITGLPFWFEIACIYLPLLFIVFCWLMVRFIFRDIPLGENDAN
SIO_010081: CCS41_RS01270
subclass of: SO_0000673
so part of: CCS41_RS01270
location: complement(259840..260082)
location: region:259840-260082:-1
so has part: feature:259840-260082:-1:exon

WP_072549947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259840-260082:-1:exon

CCS41_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01275
old locus tag: CCS41_01280
so part of: sequence
location: 260232..260609
location: region:260232-260609:1
so has part: feature:260232-260609:1:exon
subclass of: SO_0000010

position:260232:1
position: 260232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260609:1
position: 260609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260232-260609:1:exon

CCS41_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01275
old locus tag: CCS41_01280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSYSFFLLLSTATKDLEQALRRSLITLLPIERHNLRGQRKKYLRDISKEQFNKKSIKPLLEGTCKTVGEHFLPGWRNIEGYGETVSNSSRTDNNLLKYFTRQTGHQLSLATSAGHFGIIGKTGR
SIO_010081: CCS41_RS01275
subclass of: SO_0000673
so part of: CCS41_RS01275
location: 260232..260609
location: region:260232-260609:1
so has part: feature:260232-260609:1:exon

WP_072549946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260232-260609:1:exon

CCS41_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: glpT
locus tag: CCS41_RS01280
old locus tag: CCS41_01285
so part of: sequence
location: 260704..262068
location: region:260704-262068:1
so has part: feature:260704-262068:1:exon
subclass of: SO_0000010

position:260704:1
position: 260704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262068:1
position: 262068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260704-262068:1:exon

CCS41_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: glpT
locus tag: CCS41_RS01280
old locus tag: CCS41_01285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705963.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015169 - glycerol-3-phosphate transmembrane transporter activity [Evidence IEA]
GO process: GO:0015794 - glycerol-3-phosphate transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate transporter
translation: MLSIFKPAAHQSKLPEERIDSTYRRLRWQIFCGIFFGYAAYYLVRKNFTLAMPYLIEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLSAGLILSAAVMLFMGFVSWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSKKERGSIVSIWNCAHNVGGGLPPLLFLLGMAWFHDWKAALYMPAFGAMLVALIAFALMRDTPQSCGLPPIEEYKNDYPDDYNEKTEEELTAKQIFMQYVLPNKLLWYIAIAIAIANVFVYLLRYGILDWSPTYLKEVKHFTLDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMILVTIATVVYWLNPVGHPVIDMICMITIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAFVGYTVDFFGWDGGFMVMIGGSIIAVILLIIVMLSEKRHQKEQVSQYT
SIO_010081: CCS41_RS01280
subclass of: SO_0000673
so part of: CCS41_RS01280
location: 260704..262068
location: region:260704-262068:1
so has part: feature:260704-262068:1:exon

WP_072549945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260704-262068:1:exon

CCS41_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: glpQ
locus tag: CCS41_RS01285
old locus tag: CCS41_01290
so part of: sequence
location: 262157..263254
location: region:262157-263254:1
so has part: feature:262157-263254:1:exon
subclass of: SO_0000010

position:262157:1
position: 262157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263254:1
position: 263254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262157-263254:1:exon

CCS41_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: glpQ
locus tag: CCS41_RS01285
old locus tag: CCS41_01290
EC number: 3.1.4.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005163980.1
GO function: GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerophosphodiester phosphodiesterase
translation: MASYANKLISIIFASVIANSVYAEEKPSTNKLVIAHRGASGYLPEHTLPAKALAYAQGADYLEQDLVMTKDDQLIVLHDHYLDGVTDVAQRFPGRARKKDGRYYAIDFTLEEIKSLKASEVFDIEGGKPVQRYPKRFPMGKSDFRVHTFQEEIEFVQGLNHSTGKNIGIYPEIKAPWFHYQEGRDIATKVLQVLKEYGYRDKKDKVYLQCFDPNELKRIKKELLPKMGMNLNLIQLIAYTDWKETYEQQPNGQWVNYNYDWMLQPGSDAMKKIAEYADGVGPDYHMLIADSSTPKEIVLTDMAEQAHANKLQLHPYTLRADALPSYVTDVNQLYNIIYEKAKAEGAFTDFPDKGVHFLQQQGQHK
SIO_010081: CCS41_RS01285
subclass of: SO_0000673
so part of: CCS41_RS01285
location: 262157..263254
location: region:262157-263254:1
so has part: feature:262157-263254:1:exon

WP_072549944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262157-263254:1:exon

CCS41_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: yigL
locus tag: CCS41_RS01290
old locus tag: CCS41_01295
so part of: sequence
location: complement(263260..264060)
location: region:263260-264060:-1
so has part: feature:263260-264060:-1:exon
subclass of: SO_0000010

position:263260:-1
position: 263260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264060:-1
position: 264060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263260-264060:-1:exon

CCS41_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: yigL
locus tag: CCS41_RS01290
old locus tag: CCS41_01295
EC number: 3.1.3.23
EC number: 3.1.3.74
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704859.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar/pyridoxal phosphate phosphatase YigL
translation: MYHIVASDLDGTLLSPDHTLSPYARETLKSLTERGVHFVFATGRHHVDVSQIRARVAIDAFMITSNGARVHNTADKLIFSDNLDEDIVHDLYAMEYDNPDILTNVYRNDDWYINRESPEQAKFFHESIFNYQIVEIKSLPTDGVCKIYFISYNHEKLLPLEQEIKTRWGNRVNVCFSLPTCLEVMGAGVSKGHALQQVAQIFGHSLQNCIAFGDGMNDMEMLSMVGKGCIMKNAHARLKEALPALEIIGSNADDAVPHYLRKMFLV
SIO_010081: CCS41_RS01290
subclass of: SO_0000673
so part of: CCS41_RS01290
location: complement(263260..264060)
location: region:263260-264060:-1
so has part: feature:263260-264060:-1:exon

WP_072549943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263260-264060:-1:exon

CCS41_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: recQ
locus tag: CCS41_RS01295
old locus tag: CCS41_01300
so part of: sequence
location: complement(264152..265990)
location: region:264152-265990:-1
so has part: feature:264152-265990:-1:exon
subclass of: SO_0000010

position:264152:-1
position: 264152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265990:-1
position: 265990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264152-265990:-1:exon

CCS41_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: recQ
locus tag: CCS41_RS01295
old locus tag: CCS41_01300
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015699117.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent DNA helicase RecQ
translation: MTDREQQTVKILRDIFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVMKGLTLVVSPLISLMKDQVDQLLAHGVTAACLNSTQTWEQQTKVMTGCRNGQIRLLYIAPERLVMENFLEQLPHFSPVLLAVDEAHCISQWGHDFRPEYRALNQLKLRFPSLPVIALTATADETTRSDIARLLNLHQPLIQISSFDRPNIRYTLIEKFKPLDQLWRFISTQQAKCGIVYCNSRAKVDKTTELLQNRGLSVAAYHAGLDNQLRAQVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADMVWLRRCLEEKPAGEQQNIERHKLNAMVAFAETQTCRRLVLLNYFGEYQQQSCGNCDICLDPPKRYDGLVDAQKVLSCVYRVGQRFGAGYVVEILRGANNQRIRTLGHDKLSVFGIGREQAAEHWTSVLRQLIHLGKLRQNIEMFSALQLTEAARPILRSEIPLSLAVPRIQDFKPRRNAKNQKSSGGHKVYKNQTVSDGELFAKLRKLRKSMADEANIPPYVVFNDATLLEMSEKIPITSRDLLSVNGVGQRKLERFGAAFIKVIRKHLNDS
SIO_010081: CCS41_RS01295
subclass of: SO_0000673
so part of: CCS41_RS01295
location: complement(264152..265990)
location: region:264152-265990:-1
so has part: feature:264152-265990:-1:exon

WP_072549942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264152-265990:-1:exon

CCS41_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: corA
locus tag: CCS41_RS01300
old locus tag: CCS41_01305
so part of: sequence
location: complement(266045..266995)
location: region:266045-266995:-1
so has part: feature:266045-266995:-1:exon
subclass of: SO_0000010

position:266045:-1
position: 266045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266995:-1
position: 266995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266045-266995:-1:exon

CCS41_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: corA
locus tag: CCS41_RS01300
old locus tag: CCS41_01305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1
GO function: GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: magnesium/cobalt transporter CorA
translation: MLSAFKLDNHRLSRLELDESDKLTAALWVDLMEPEIAERERVQTELGQNLATRPELDDIEASARFFEDEDGLHIHSFFYYEDAEDHAGNTTVAFTIRDGRLYTLRERELPAFRLYRMRARTQKLVDGNAYELLLDLFETKIEQLADEIENIYNDLEKLSRVIMEGQQGDKYDAALSILAEQEDIGWKVRLCLMDTQRALNFLVRKARLPAGQLEQAREVQRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVIFLPPTLVASSYGMNFQFMPELHWSFGYPGAVSLMIIAGVAPYLYFKRKKWL
SIO_010081: CCS41_RS01300
subclass of: SO_0000673
so part of: CCS41_RS01300
location: complement(266045..266995)
location: region:266045-266995:-1
so has part: feature:266045-266995:-1:exon

WP_072549941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266045-266995:-1:exon

CCS41_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
alternative label: mutU
alternative label: recL
gene: uvrD
locus tag: CCS41_RS01305
old locus tag: CCS41_01310
gene synonym: mutU; recL
so part of: sequence
location: complement(267025..269187)
location: region:267025-269187:-1
so has part: feature:267025-269187:-1:exon
subclass of: SO_0000010

position:267025:-1
position: 267025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269187:-1
position: 269187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267025-269187:-1:exon

CCS41_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
alternative label: mutU
alternative label: recL
gene: uvrD
locus tag: CCS41_RS01305
old locus tag: CCS41_01310
gene synonym: mutU; recL
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012229070.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA helicase II
translation: MDDSYLLDSLNEKQREAVAAPLSNRLVLAGAGSGKTRVLVHRVAWLLSKKKVSPFSIIAVTFTNKAAAEMRYRIEHLLGDGNNNHSIWMGTFHGLAHRLLRIHHLDANLPPDFQVLDSDDQLRLVKRIVKALNLDDKKWAPRQAMWYINSKKEAGLRPQHIEDYGHLAEATWLSIYHAYHQACDRGGLVDFAELLLRAHELWLHKPDILNHYQQRFNHILVDEFQDTNSIQYAWIRLLAGDQANVMIVGDDDQSIYGWRGAQVENIQRFLQDYPAAETIRLEQNYRSTGNILTAANTLIANNSERLGKNLWTQAAIGEPIALYAAINEWDEARFVVSRIKVWQERGGLLKNCAILYRNNAQSRVLEDALLHATMPYRIYGGQRFFERQEIKDALAYLRLVCNRNDDVAFERVVNTPTRGIGDRTLDILRQHARDQQLTLWQSTTTLLQNNVLAGRVAATLQRFIELVEALAHETANLPLHKQTDQIIHDSGLWSMYKEEKGEKGQARIENLTELVTATEQYQHEDLDMSPLSAFLSHAALEAGEGQADPHQDAVQLMTLHSAKGLEFSQVFIVGVEEGIFPRQISSDTSGHLEEERRLAYVGITRAMQKLTLTYAESRRFYGKDVKQPPSRFIDELPSICIERVRSRATVSRPFKNYSRDPSLHKDDNDFTVGQRVRHPIFGEGTIVQLENNDEQKRVQVAFPGEKAKWLVVAYARLETL
SIO_010081: CCS41_RS01305
subclass of: SO_0000673
so part of: CCS41_RS01305
location: complement(267025..269187)
location: region:267025-269187:-1
so has part: feature:267025-269187:-1:exon

WP_072549940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267025-269187:-1:exon

CCS41_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: xerC
locus tag: CCS41_RS01310
old locus tag: CCS41_01315
so part of: sequence
location: complement(269197..270099)
location: region:269197-270099:-1
so has part: feature:269197-270099:-1:exon
subclass of: SO_0000010

position:269197:-1
position: 269197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270099:-1
position: 270099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269197-270099:-1:exon

CCS41_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: xerC
locus tag: CCS41_RS01310
old locus tag: CCS41_01315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706861.1
GO function: GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine recombinase XerC
translation: MLTMLQQPVNNFLHYLKVERQLSPLTVASYSRQLQILIKMIDQLGINQWEMLDAAGVRKLLVQSKRAGLHASSLALRFSALRSFLDYLVTQRILQANPAKGITTGRSGHHLPKNIDVDEVDRLLDIELQDPLAIRDRTMLEVMYGAGLRLAELIGMDCRHVDLIEGEVWVLGKGSKERKVPIGMTAVTWLQRWLPLRDLFVPQDDAIFLANTGKRISPRNVQKRFAEWGVKQGVNSHIHPHKLRHSFATHMLESCGDLRAVQELLGHANLSTTQIYTHLDFQHLATVYDAAHPRAKRGKN
SIO_010081: CCS41_RS01310
subclass of: SO_0000673
so part of: CCS41_RS01310
location: complement(269197..270099)
location: region:269197-270099:-1
so has part: feature:269197-270099:-1:exon

WP_072549939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269197-270099:-1:exon

CCS41_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01315
old locus tag: CCS41_01320
so part of: sequence
location: complement(270093..270809)
location: region:270093-270809:-1
so has part: feature:270093-270809:-1:exon
subclass of: SO_0000010

position:270093:-1
position: 270093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270809:-1
position: 270809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270093-270809:-1:exon

CCS41_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01315
old locus tag: CCS41_01320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708580.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF484 domain-containing protein
translation: MNNYQEQTITDIELNDELVMQYLLQSPDFFIRNASLVEKIRIPHPMKGGISLVEWQLRRQRNEIKQLQEEITLLMEYAGLNEMLCKRLLQLQADLAIASTLRDMLKRLQHWARTFGLLDAHVRLFSDRWQLNTPFDVANLALSRQIFEPLRRQRLSEEQHFLGSLNETELQLLLPQAQQVGSVALSLLGDKGDLGVIIFSSHDSQHYQQGMGTVILHQIAKFLPGLLTRWIERTSTPC
SIO_010081: CCS41_RS01315
subclass of: SO_0000673
so part of: CCS41_RS01315
location: complement(270093..270809)
location: region:270093-270809:-1
so has part: feature:270093-270809:-1:exon

WP_072549938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270093-270809:-1:exon

CCS41_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: dapF
locus tag: CCS41_RS01320
old locus tag: CCS41_01325
so part of: sequence
location: complement(270823..271647)
location: region:270823-271647:-1
so has part: feature:270823-271647:-1:exon
subclass of: SO_0000010

position:270823:-1
position: 270823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271647:-1
position: 271647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270823-271647:-1:exon

CCS41_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: dapF
locus tag: CCS41_RS01320
old locus tag: CCS41_01325
EC number: 5.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1
GO function: GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminopimelate epimerase
translation: MQFSKMHGLGNDFMVVDAVTQSVYFSPELVRRLADRHTGVGFDQMLVVEAPYDPELDFHYRIFNADGSEVSQCGNGARCFALFVHLKGLTKKRHIHVSTQSGRMVLHITDDEQVCVNMGEPVFAPQAVPFRAAKAEKTYILRTTEHTVLCGVVSIGNPHCVLQVEDISVADVALLGPILENHERFPQRANIGFMQVVSRERICLRVYERGVGETKACGSGACAAVAVGIEQGLLGENVDVQMQGGSLRINWQGAGHPLYMTGQAAHLYDGFIHL
SIO_010081: CCS41_RS01320
subclass of: SO_0000673
so part of: CCS41_RS01320
location: complement(270823..271647)
location: region:270823-271647:-1
so has part: feature:270823-271647:-1:exon

WP_072549937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270823-271647:-1:exon

CCS41_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01325
so part of: sequence
location: complement(271663..271821)
location: region:271663-271821:-1
so has part: feature:271663-271821:-1:exon
subclass of: SO_0000010

position:271663:-1
position: 271663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271821:-1
position: 271821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271663-271821:-1:exon

CCS41_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010845300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein
translation: MMKKQQRWLLITIIWVGLVGCGLKGPLYSPPAVIQKVEKVKIATAHPDLARQ
SIO_010081: CCS41_RS01325
subclass of: SO_0000673
so part of: CCS41_RS01325
location: complement(271663..271821)
location: region:271663-271821:-1
so has part: feature:271663-271821:-1:exon

WP_072549936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271663-271821:-1:exon

CCS41_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: btuF
locus tag: CCS41_RS01330
old locus tag: CCS41_01330
so part of: sequence
location: complement(272051..272836)
location: region:272051-272836:-1
so has part: feature:272051-272836:-1:exon
subclass of: SO_0000010

position:272051:-1
position: 272051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272836:-1
position: 272836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272051-272836:-1:exon

CCS41_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: btuF
locus tag: CCS41_RS01330
old locus tag: CCS41_01330
EC number: 7.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002226792.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: vitamin B12 ABC transporter substrate-binding protein BtuF
translation: MLITASLVFPLSAAERVISLAPSTTELAYAAGLGDQLVAVSDYSDYPASANKLERVASWQGINVERILALKPDLILAWRGGNPQRSLDQLAAFGIPIFYSDPHSLEQMVQDLEKLAVYSPNAKQAYQAAAQIRQQIAALYQQYGRHSQPLRVLLQFGTQPLFTSSGNTLQSEIVTLCGGKNIFADSQIPWPQISREQVLRRRPQVVIISGQPSQAKNIKTFWRPQLELPVIVLNEDWFNRASPRILLAAKQLCSQLAVIPS
SIO_010081: CCS41_RS01330
subclass of: SO_0000673
so part of: CCS41_RS01330
location: complement(272051..272836)
location: region:272051-272836:-1
so has part: feature:272051-272836:-1:exon

WP_240313876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272051-272836:-1:exon

CCS41_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: mtnN
locus tag: CCS41_RS01335
old locus tag: CCS41_01335
pseudo: true
so part of: sequence
location: complement(272884..273596)
location: region:272884-273596:-1
so has part: feature:272884-273596:-1:exon
subclass of: SO_0000010

position:272884:-1
position: 272884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273596:-1
position: 273596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272884-273596:-1:exon

CCS41_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: mtnN
locus tag: CCS41_RS01335
old locus tag: CCS41_01335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019080467.1
GO function: GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO process: GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
SIO_010081: CCS41_RS01335
subclass of: SO_0000673
so part of: CCS41_RS01335
location: complement(272884..273596)
location: region:272884-273596:-1
so has part: feature:272884-273596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272884-273596:-1:exon

CCS41_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: degP
locus tag: CCS41_RS01340
old locus tag: CCS41_01340
so part of: sequence
location: 273953..275395
location: region:273953-275395:1
so has part: feature:273953-275395:1:exon
subclass of: SO_0000010

position:273953:1
position: 273953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275395:1
position: 275395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273953-275395:1:exon

CCS41_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: degP
locus tag: CCS41_RS01340
old locus tag: CCS41_01340
EC number: 3.4.21.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine endoprotease DegP
translation: MKKTILVFSTLALSISLVVMPVVATAAGPLSSNQIGDSQTGSGQVLPSLAPMLENVMPAVVSINIEGSTIVKRDQRSSQFFGDASPFCQEDSPLQNSPFCGGNQRGYSQPIEKNFKALGSGVVIDADKGYVVTNNHVVEHASKIQVQLSDGRHYDAKIIGKDPRTDIALLQLKDFKNLKAMKMADSDKLRVGDYTVAIGNPYGLGETATFGIVSALGRSGLNLENDENFIQTDAAINRGNSGGALVNLQGELIGINTAILAPDGGNIGIGFAIPSNMIKNLTAQMVEFGQVKRGELGIMGTELNAELAKAMRVDAQKGAFISQVLPNSSAAKAGIKAGDVIVKLNNKPVNSFASFRAEIGSLPIGTKMTLGLLRDGKPITINITLEQGSQARVSSGTLYKGIEGAELSNATSSPGVKIGEVKPGSAAFRIGLKKDDIIMAISQQRVQNLADLRKILDGEPKILALRIRRGENDIYLLAQQ
SIO_010081: CCS41_RS01340
subclass of: SO_0000673
so part of: CCS41_RS01340
location: 273953..275395
location: region:273953-275395:1
so has part: feature:273953-275395:1:exon

WP_072549933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273953-275395:1:exon

CCS41_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: cgtA
locus tag: CCS41_RS01345
old locus tag: CCS41_01345
so part of: sequence
location: complement(275476..276573)
location: region:275476-276573:-1
so has part: feature:275476-276573:-1:exon
subclass of: SO_0000010

position:275476:-1
position: 275476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276573:-1
position: 276573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275476-276573:-1:exon

CCS41_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: cgtA
locus tag: CCS41_RS01345
old locus tag: CCS41_01345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011092306.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Obg family GTPase CgtA
translation: MKFVDEAMILVVAGDGGNGCVSFRREKYIPDGGPNGGDGGDGGNVYLLADENLNTLIDYHFVKAFRAERGQNGQSCDCTGKRGKDITLKVPVGTRVLDQGTGEILGDMLCHQQSLMVAQGGFHGLGNTRFKSSVNRTPRQKTMGTTGEARDLTLELLLLADVGMLGLPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGAVRMDHEQSFVVADIPGLIEGASTGVGLGIRFLKHLERCRLLLHLVDIAPIDGSDPVENINIIINELQQYKVDLVNKPRWLVFNKTDLLDKTEVEERAKSITAALGWQEKYYIISAANRSGVHVLCWDVMNFLNTQQKDLTMEKVEFMWDDYHREQLAGFGTNNGS
SIO_010081: CCS41_RS01345
subclass of: SO_0000673
so part of: CCS41_RS01345
location: complement(275476..276573)
location: region:275476-276573:-1
so has part: feature:275476-276573:-1:exon

WP_072549932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275476-276573:-1:exon

CCS41_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: cyoA
locus tag: CCS41_RS01350
old locus tag: CCS41_01350
so part of: sequence
location: 277250..278191
location: region:277250-278191:1
so has part: feature:277250-278191:1:exon
subclass of: SO_0000010

position:277250:1
position: 277250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278191:1
position: 278191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277250-278191:1:exon

CCS41_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: cyoA
locus tag: CCS41_RS01350
old locus tag: CCS41_01350
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015671187.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
GO process: GO:0022900 - electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome o ubiquinol oxidase subunit II
translation: MRRKSYIKSIGIFSLFAAMVMLSGCDTVLMDPKGAIGVEQKKLILTATGLMLIVVIPVIFMTFAFAWKFRASNKNAAYTPNWSHSNKIEVVVWSVPIIIIAILAVITWRTSHELDPYKPLVSDKKPITIEVISLDWKWLFIYPEQGIATVNELAFPTHVPLNFKITSNSVMNSFFIPQLGGQIYAMAGMQTKLHLIANEAGKYKGISGSYSGEGFSGMKFTAIATPTEADFNRWVAQVKASPHTLNNTDDFDKLAQPSENNPVDYFSSVKPALFKETINKFMGDMHMHSSEPMGDKMHQSIHKGEQVHTGTEE
SIO_010081: CCS41_RS01350
subclass of: SO_0000673
so part of: CCS41_RS01350
location: 277250..278191
location: region:277250-278191:1
so has part: feature:277250-278191:1:exon

WP_072549931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277250-278191:1:exon

CCS41_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: cyoB
locus tag: CCS41_RS01355
old locus tag: CCS41_01355
pseudo: true
so part of: sequence
location: 278195..280185
location: region:278195-280185:1
so has part: feature:278195-280185:1:exon
subclass of: SO_0000010

position:278195:1
position: 278195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280185:1
position: 280185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278195-280185:1:exon

CCS41_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: cyoB
locus tag: CCS41_RS01355
old locus tag: CCS41_01355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytochrome o ubiquinol oxidase subunit I
SIO_010081: CCS41_RS01355
subclass of: SO_0000673
so part of: CCS41_RS01355
location: 278195..280185
location: region:278195-280185:1
so has part: feature:278195-280185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278195-280185:1:exon

CCS41_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01360
old locus tag: CCS41_01360
so part of: sequence
location: 280175..280804
location: region:280175-280804:1
so has part: feature:280175-280804:1:exon
subclass of: SO_0000010

position:280175:1
position: 280175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280804:1
position: 280804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280175-280804:1:exon

CCS41_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01360
old locus tag: CCS41_01360
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002208651.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
GO process: GO:0022904 - respiratory electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome o ubiquinol oxidase subunit III
translation: MSTESLTQHSFNHNNMAHAEHSHHDSGATKIFGFWIYLMSDCILFATLFATYAVLVNSTAGGPSGKDIFDLRFVLIETFLLLFSSITYGIAMLGMNKGSKGQVNLWLALTFLLGLGFVAMEIFEFHELIAEGYGPDRSAFLSSFFALVATHGIHVSVGLVWIIIMIIQITKRGLSATNQTRLMCLSLFWHFLDVVWICVFTVVYLLGAM
SIO_010081: CCS41_RS01360
subclass of: SO_0000673
so part of: CCS41_RS01360
location: 280175..280804
location: region:280175-280804:1
so has part: feature:280175-280804:1:exon

WP_072549929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280175-280804:1:exon

CCS41_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01365
old locus tag: CCS41_01365
so part of: sequence
location: 280805..281170
location: region:280805-281170:1
so has part: feature:280805-281170:1:exon
subclass of: SO_0000010

position:280805:1
position: 280805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281170:1
position: 281170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280805-281170:1:exon

CCS41_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01365
old locus tag: CCS41_01365
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016928864.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome o ubiquinol oxidase subunit IV
translation: MSVSTDDRIGNRDHAETDHTGASHGSLKSYLIGFVLSVILTVIPFAMVMNDSASHSIILTVVVALALVQIVVHLVYFLHMNGSSAERWNLVAFVFTVIIIAIVVIGSLWIMYNLNINMMVE
SIO_010081: CCS41_RS01365
subclass of: SO_0000673
so part of: CCS41_RS01365
location: 280805..281170
location: region:280805-281170:1
so has part: feature:280805-281170:1:exon

WP_072549928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280805-281170:1:exon

CCS41_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: cyoE
locus tag: CCS41_RS01370
old locus tag: CCS41_01370
so part of: sequence
location: 281184..282071
location: region:281184-282071:1
so has part: feature:281184-282071:1:exon
subclass of: SO_0000010

position:281184:1
position: 281184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282071:1
position: 282071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281184-282071:1:exon

CCS41_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: cyoE
locus tag: CCS41_RS01370
old locus tag: CCS41_01370
EC number: 2.5.1.141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005182174.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO process: GO:0048034 - heme O biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme o synthase
translation: MIKQYLQVTKPGIIFGNLISVIGGFLLAAKGVIDYPLFLSTLLGVSLVVASGCVFNNYIDRDIDGIMERTKNRVLVMGLIDAKTSLIYASALGIAGMLLLYFVANVLAMVLAVMGFVIYVVVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGKLDTGAFILLSIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVIKGIAVTKNHITLYILAFMLATLMLTLSGYAGYSYLFVAAAVSLWWLGMALRGYKTGNDGIWAKKLFIFSIIAITSLSIMMSVDFNVTASTALLVNVS
SIO_010081: CCS41_RS01370
subclass of: SO_0000673
so part of: CCS41_RS01370
location: 281184..282071
location: region:281184-282071:1
so has part: feature:281184-282071:1:exon

WP_072549927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281184-282071:1:exon

CCS41_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01375
old locus tag: CCS41_01375
pseudo: true
so part of: sequence
location: 282091..283478
location: region:282091-283478:1
so has part: feature:282091-283478:1:exon
subclass of: SO_0000010

position:282091:1
position: 282091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283478:1
position: 283478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282091-283478:1:exon

CCS41_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01375
old locus tag: CCS41_01375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002216717.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MFS transporter
SIO_010081: CCS41_RS01375
subclass of: SO_0000673
so part of: CCS41_RS01375
location: 282091..283478
location: region:282091-283478:1
so has part: feature:282091-283478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282091-283478:1:exon

CCS41_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01380
old locus tag: CCS41_01380
so part of: sequence
location: complement(283487..286102)
location: region:283487-286102:-1
so has part: feature:283487-286102:-1:exon
subclass of: SO_0000010

position:283487:-1
position: 283487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286102:-1
position: 286102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283487-286102:-1:exon

CCS41_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01380
old locus tag: CCS41_01380
inference: COORDINATES: protein motif:HMM:TIGR01414.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0015474 - autotransporter activity [Evidence IEA]
GO process: GO:0046819 - protein secretion by the type V secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autotransporter outer membrane beta-barrel domain-containing protein
translation: MLMRSPNLGLFNFSIIATLSGLSFSVVANTGNVENTIITSPMVTGCMLKTDNSSVTVDSSGSISIISNTNRTSQGVGILATGDTTFGKIINHGKIMGAGQSRGIEIEEGATVNAIINTGEITTEGHGIELGFNNSLATVNRGTEEFGIYNSGLIKTSRSIWSDESGIRIHNQSKLDGLFNSGTISGYQHAIFVSDTEGTINNNIVNNGSLSGESLHGIYNIGKIDGIINQNSIAGKMDGVRNEGRIKNINNSGSITGEQTGITNEGTVDSIVNTGTVGSTRYAINNTGTITDSIDNYGRLNGNVELSHATLNLLRNASVSGIINGNSGSAITVGTNVLPTNYTANDHASVGKVSVTSDSVLTLGKEIIWSANGADGITIDGDLLLNEQSTLRGNSTNNNKIFLIGHSANIDGNLMNNRSLILNPHTVSTGNTLNITRNYTGETDSTLFLATVLGDDNSLTDKLIIDGDANGTTTVHITNIKGKGAQTQNGIEIIKINGASNAIFLPGGRIVAGSYDYNLVKKNANWYLTSTDTTEPKINPVEPEINEPIKEPILRPEVGGYLNNITIANTMFNMRLHERLGEMQYTDFLGSKEKITNLWFRSTGGRSLYSDKSGQISTQADRYVFQIGADIAQWSSDGDDRLHLGIMAGHGNNSASALSKVTGYQAKGGIEGYSTGLYTTWYANQQDKSGPYLDSWVLWNWFNNYISGHGLPRENYRSKGITASLETGYSFHIAEVGIHSYWLQPQAQIIWMNVKGNTHYEANGTRITHSGQGDIQLRLGTRVYMRAHHDVTRGQFQPFIEANWFNNSQKQRVSMDGLNNNIVGSKNSGELRIGVEGYTPTGTQIWGSFGQQWGNYNYKDTQVILGIKYSF
SIO_010081: CCS41_RS01380
subclass of: SO_0000673
so part of: CCS41_RS01380
location: complement(283487..286102)
location: region:283487-286102:-1
so has part: feature:283487-286102:-1:exon

WP_205411446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283487-286102:-1:exon

CCS41_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: waaA
locus tag: CCS41_RS01385
old locus tag: CCS41_01385
so part of: sequence
location: complement(286412..287689)
location: region:286412-287689:-1
so has part: feature:286412-287689:-1:exon
subclass of: SO_0000010

position:286412:-1
position: 286412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287689:-1
position: 287689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286412-287689:-1:exon

CCS41_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: waaA
locus tag: CCS41_RS01385
old locus tag: CCS41_01385
EC number: 2.4.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013648993.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
translation: MLLRLYQILFYLIQPLIWLRLLLRSRKAPAYRQRWGERYGFCAGKVAAKGILLHSVSVGETLAAIPLIKALRHHYPDMPITVTTMTPTGSERVKSALNNEVHHVYLPYDLPCAVNRFLNQLNPHLVIIMETELWPTLIHALHRRSIPLVIANARLSARSAARYQKLGHFIRQMLQRITLIAAQHHEDGERLISLGLKRCQLSVTGSLKFDIAITPELATRAATLRSQWASHRPVWIATSTHDGEETLLLAAYRKLLSTHPTLLLILVPRHPERFPTAIELVQKAGLNYMLRSRGEIPSASTQVVIGDTMGELMLLYGIADIAFVGGSLVKHGGHNPLEAAAHSIPILMGSHTFNFKEICAKLTKAKGLITVTDTLSLVQKMNFLLNDKNRLFYHGQQAVDVLYKNQGALQRLLHLLVPYLRPHNH
SIO_010081: CCS41_RS01385
subclass of: SO_0000673
so part of: CCS41_RS01385
location: complement(286412..287689)
location: region:286412-287689:-1
so has part: feature:286412-287689:-1:exon

WP_072549925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286412-287689:-1:exon

CCS41_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01390
old locus tag: CCS41_01390
so part of: sequence
location: complement(287785..289524)
location: region:287785-289524:-1
so has part: feature:287785-289524:-1:exon
subclass of: SO_0000010

position:287785:-1
position: 287785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289524:-1
position: 289524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287785-289524:-1:exon

CCS41_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01390
old locus tag: CCS41_01390
EC number: 6.1.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005163997.1
GO function: GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO process: GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline--tRNA ligase
translation: MRTSRYLLATLKETPADAEIISHQMMLRAGMIRQLASGLYTWLPTGIRVLKKVENIVREEMNKAGAIEVSMPMVQPASLWQETGRWQQYGAELLRFVDRNERHFVLGPTHEEVITDFIRNGIRSYKQLPLNLFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTKASLQETYNAMYAAYSKIFTRIGLDFRAVLADTGSIGGSTSHEFQVLADSGEDDIVFSTESNFAANIELAEAVAPTQTRAVATEDLRIVDTPHVKIITDLVTQFKMPIEKTVKTLFVRAHETEANGHKLIALLLRGDHQLNTIKAEKLPQVAVPLTFASEQEIHEWVNAKPGSLGPINLASSSIVVDRTVAVMSDFSAGANIDGKHYFGINWDRDLPLPQVADIRNVQEGDASPDGQGTLQIKRGIEVGHIFQLGNKYSEAMKATLQCEDCTNQVITMGCYGIGVSRVVAATIEQHHDDRGIIWPDAIAPFQIAIIPIINIHTSSRVKEFAEQLYETLVNQGIEVIIDDRQERPGVMFADMELIGIPHHVVISDRTLEKEEVEYKNRSAHKKDKPEMISSSEIVDFIIKKIKQ
SIO_010081: CCS41_RS01390
subclass of: SO_0000673
so part of: CCS41_RS01390
location: complement(287785..289524)
location: region:287785-289524:-1
so has part: feature:287785-289524:-1:exon

WP_072549924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287785-289524:-1:exon

CCS41_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01395
old locus tag: CCS41_01395
so part of: sequence
location: complement(289751..290566)
location: region:289751-290566:-1
so has part: feature:289751-290566:-1:exon
subclass of: SO_0000010

position:289751:-1
position: 289751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290566:-1
position: 290566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289751-290566:-1:exon

CCS41_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01395
old locus tag: CCS41_01395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016534993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MetQ/NlpA family lipoprotein
translation: MSIKLKSVTAISILIGSLVLVACGQKEKDPNSIKVGVISGSEQQVAEVAKKVAKDKYGLNVELVVFNDYVLPNEALSQDDIDANAFQHKPYLDQQIKDRGYKLVAVGHTFVYPIAGYSKKIKSLDELQSGSQIALPNDPTNLGRALLLLQKQGLLKLTNDVGLLPTVLDVIDNPKNLKLVELEAPQLPRSLDDQQIALAVINSTYASQINLTPAKDGLFVEDKDSPYVNLIVARADNKEAENVKKFVQAYQSDEVFTAANKIFNGGAVKGW
SIO_010081: CCS41_RS01395
subclass of: SO_0000673
so part of: CCS41_RS01395
location: complement(289751..290566)
location: region:289751-290566:-1
so has part: feature:289751-290566:-1:exon

WP_072549923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289751-290566:-1:exon

CCS41_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01400
old locus tag: CCS41_01400
so part of: sequence
location: complement(290790..291443)
location: region:290790-291443:-1
so has part: feature:290790-291443:-1:exon
subclass of: SO_0000010

position:290790:-1
position: 290790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291443:-1
position: 291443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290790-291443:-1:exon

CCS41_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01400
old locus tag: CCS41_01400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine ABC transporter permease MetI
translation: MSEAMIWLLGRGIWETLMMTFVSGFFGFVIGLPIGVLLYVTRPGQIISNTTLYKLLSALVNIFRSIPFIILLVWMIPFTRLLIGTSIGLQAAIVPLTVSAAPFIARMVENAMLEIPSGLIEAARAMGATPLQIINKVLLPEALPSLVNTATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLILLVTLVYLMQFVGNYIVNALNHK
SIO_010081: CCS41_RS01400
subclass of: SO_0000673
so part of: CCS41_RS01400
location: complement(290790..291443)
location: region:290790-291443:-1
so has part: feature:290790-291443:-1:exon

WP_072549922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290790-291443:-1:exon

CCS41_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: metN
locus tag: CCS41_RS01405
old locus tag: CCS41_01405
so part of: sequence
location: complement(291436..292467)
location: region:291436-292467:-1
so has part: feature:291436-292467:-1:exon
subclass of: SO_0000010

position:291436:-1
position: 291436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292467:-1
position: 292467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291436-292467:-1:exon

CCS41_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: metN
locus tag: CCS41_RS01405
old locus tag: CCS41_01405
inference: COORDINATES: similar to AA sequence:RefSeq:NP_308228.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0048473 - D-methionine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine ABC transporter ATP-binding protein MetN
translation: MIRLSHISKVFKQEANTINALSDVSLHVPTGQVYGVIGASGAGKSTLIRCANMLERPTSGRVLIDGQDLTQLSAGQLTKVRRQIGMIFQHFNLLSCRTVFNNIALPLELDSLPCTEIKRRVSKLLDLVGLIDKQNAYPTNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDQVAVISAGKLIEQGSVSKIFSHPKTPLAQQFIQSTLHLDIPDDYKQRMSVQPAPSRVPLLKLEFTGQSVDAPLISQVVRRFNIDISILSSQMDYAGGVKFGVMLVEMHGEEQSRLAAITFLQHHHVKVEVLGYV
SIO_010081: CCS41_RS01405
subclass of: SO_0000673
so part of: CCS41_RS01405
location: complement(291436..292467)
location: region:291436-292467:-1
so has part: feature:291436-292467:-1:exon

WP_072549921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291436-292467:-1:exon

CCS41_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: gmhB
locus tag: CCS41_RS01410
old locus tag: CCS41_01410
so part of: sequence
location: 292658..293224
location: region:292658-293224:1
so has part: feature:292658-293224:1:exon
subclass of: SO_0000010

position:292658:1
position: 292658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293224:1
position: 293224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292658-293224:1:exon

CCS41_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: gmhB
locus tag: CCS41_RS01410
old locus tag: CCS41_01410
EC number: 3.1.3.82
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005225247.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
translation: MIQSVPAIFLDRDGTINIDHGYVYKIDNFQFIEGVIDACCELKAMGFALVLVTNQSGIARKKFTEAQFITLTEWMDWSLADRGVDLDGIYFCPHHPEGREDKYRQLCDCRKPLPGMLLQAKNELHIDMAASYMVGDTIEDMQAAQAAHVATKVLLRSGKETTTAAVAAADWVLDSLADLPAVIKKRDK
SIO_010081: CCS41_RS01410
subclass of: SO_0000673
so part of: CCS41_RS01410
location: 292658..293224
location: region:292658-293224:1
so has part: feature:292658-293224:1:exon

WP_072549920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292658-293224:1:exon

CCS41_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01415
old locus tag: CCS41_01415
so part of: sequence
location: 293657..295202
location: region:293657-295202:1
so has part: feature:293657-295202:1:exon
subclass of: SO_0000573

position:293657:1
position: 293657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295202:1
position: 295202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293657-295202:1:exon

CCS41_RS01415
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1878942
locus tag: CCS41_RS01415
old locus tag: CCS41_01415
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CCS41_RS01415
subclass of: SO_0000673
so part of: CCS41_RS01415
location: 293657..295202
location: region:293657-295202:1
so has part: feature:293657-295202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293657-295202:1:exon

CCS41_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01420
old locus tag: CCS41_01420
so part of: sequence
location: 295315..295391
location: region:295315-295391:1
so has part: feature:295315-295391:1:exon
subclass of: SO_0000663

position:295315:1
position: 295315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295391:1
position: 295391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295315-295391:1:exon

CCS41_RS01420
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS01420
old locus tag: CCS41_01420
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:295349..295351,aa:Ile,seq:gat)
SIO_010081: CCS41_RS01420
subclass of: SO_0000673
so part of: CCS41_RS01420
location: 295315..295391
location: region:295315-295391:1
so has part: feature:295315-295391:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295315-295391:1:exon

CCS41_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01425
old locus tag: CCS41_01425
so part of: sequence
location: 295506..295581
location: region:295506-295581:1
so has part: feature:295506-295581:1:exon
subclass of: SO_0000663

position:295506:1
position: 295506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295581:1
position: 295581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295506-295581:1:exon

CCS41_RS01425
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS01425
old locus tag: CCS41_01425
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:295539..295541,aa:Ala,seq:tgc)
SIO_010081: CCS41_RS01425
subclass of: SO_0000673
so part of: CCS41_RS01425
location: 295506..295581
location: region:295506-295581:1
so has part: feature:295506-295581:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295506-295581:1:exon

CCS41_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01430
old locus tag: CCS41_01430
so part of: sequence
location: 295754..298666
location: region:295754-298666:1
so has part: feature:295754-298666:1:exon
subclass of: SO_0000573

position:295754:1
position: 295754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298666:1
position: 298666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295754-298666:1:exon

CCS41_RS01430
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1878942
locus tag: CCS41_RS01430
old locus tag: CCS41_01430
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CCS41_RS01430
subclass of: SO_0000673
so part of: CCS41_RS01430
location: 295754..298666
location: region:295754-298666:1
so has part: feature:295754-298666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295754-298666:1:exon

CCS41_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rrf
locus tag: CCS41_RS01435
old locus tag: CCS41_01435
so part of: sequence
location: 298737..298852
location: region:298737-298852:1
so has part: feature:298737-298852:1:exon
subclass of: SO_0000573

position:298737:1
position: 298737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298852:1
position: 298852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298737-298852:1:exon

CCS41_RS01435
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1878942
gene: rrf
locus tag: CCS41_RS01435
old locus tag: CCS41_01435
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CCS41_RS01435
subclass of: SO_0000673
so part of: CCS41_RS01435
location: 298737..298852
location: region:298737-298852:1
so has part: feature:298737-298852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298737-298852:1:exon

CCS41_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: ybjG
locus tag: CCS41_RS01440
old locus tag: CCS41_01440
so part of: sequence
location: 299327..299932
location: region:299327-299932:1
so has part: feature:299327-299932:1:exon
subclass of: SO_0000010

position:299327:1
position: 299327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299932:1
position: 299932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299327-299932:1:exon

CCS41_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: ybjG
locus tag: CCS41_RS01440
old locus tag: CCS41_01440
EC number: 3.6.1.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004717242.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyl-diphosphate phosphatase
translation: MEQLNHFLFTLINATPASTFETITFAIVLARYAIFIIPLLLIGLWLWGTANSMVLQRQLVIKTAIALVFSMLLSAVIGRLLPHERPFVEGFGYIFLAHVPDSSFPSNHGSAIFTFALAFLFWHRLWSGMGLIIIALAIAWSRIYLGVHWPLDMLGAFFVGLMGCLLSQGVWHLLGDCITQYLFKFYRFCFAFPISKGWIKA
SIO_010081: CCS41_RS01440
subclass of: SO_0000673
so part of: CCS41_RS01440
location: 299327..299932
location: region:299327-299932:1
so has part: feature:299327-299932:1:exon

WP_072551110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299327-299932:1:exon

CCS41_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: mscM
locus tag: CCS41_RS01445
old locus tag: CCS41_01445
pseudo: true
so part of: sequence
location: complement(300020..303336)
location: region:300020-303336:-1
so has part: feature:300020-303336:-1:exon
subclass of: SO_0000010

position:300020:-1
position: 300020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303336:-1
position: 303336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300020-303336:-1:exon

CCS41_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: mscM
locus tag: CCS41_RS01445
old locus tag: CCS41_01445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006707067.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: miniconductance mechanosensitive channel MscM
SIO_010081: CCS41_RS01445
subclass of: SO_0000673
so part of: CCS41_RS01445
location: complement(300020..303336)
location: region:300020-303336:-1
so has part: feature:300020-303336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300020-303336:-1:exon

CCS41_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: asd
locus tag: CCS41_RS01450
old locus tag: CCS41_01450
so part of: sequence
location: complement(303401..304282)
location: region:303401-304282:-1
so has part: feature:303401-304282:-1:exon
subclass of: SO_0000010

position:303401:-1
position: 303401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304282:-1
position: 304282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303401-304282:-1:exon

CCS41_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: asd
locus tag: CCS41_RS01450
old locus tag: CCS41_01450
EC number: 4.1.1.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019080722.1
GO function: GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: archaetidylserine decarboxylase
translation: MLERIKIKLQYLLPKQWLTLLAGWGADKQAGWLTQLAIKTFSRYYKVDMKDAQNPEFSSYHSFNEFFVRPLHADARPIAAGDQVLVQPADGTISQLGTIRDGQILQAKEHNYSLEALLAGNYQLAAEFQNGQFITTYLAPHDYHRVHMPCYGVLREMIYVPGDLFSVNPLTTANIPNLFARNERVICIFDTAFGTMAQILVGATVVGSIETVWAGSVTPPREGVIRRWTYPAAGDEGAIVLEKGQEMGHFKLGSTVINLFAENKVYLAVQLSNGSITRVGEPLAEAVVTPATS
SIO_010081: CCS41_RS01450
subclass of: SO_0000673
so part of: CCS41_RS01450
location: complement(303401..304282)
location: region:303401-304282:-1
so has part: feature:303401-304282:-1:exon

WP_072551109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303401-304282:-1:exon

CCS41_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rsgA
locus tag: CCS41_RS01455
old locus tag: CCS41_01455
so part of: sequence
location: complement(304403..305446)
location: region:304403-305446:-1
so has part: feature:304403-305446:-1:exon
subclass of: SO_0000010

position:304403:-1
position: 304403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305446:-1
position: 305446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304403-305446:-1:exon

CCS41_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rsgA
locus tag: CCS41_RS01455
old locus tag: CCS41_01455
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704953.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: small ribosomal subunit biogenesis GTPase RsgA
translation: MSKNKLSKGQQRRVQANHQRRLRTDNLSPDDSSFGEAQQGIVISRFGQHADVEASDGVQHRCNIRRTLSSLVTGDRVVWRPGIERQEGIKVKGIVDAIHPRTSVLTRPDLYDGVKPIAANIDQIIVVSAILPELSLNIIDRYLVVCETLKIKPLILLNKIDLLDDAGHKWVDGMMAIYQHMNYPVFKVSSLSGEGMKAFAQVLTGRISIFAGQSGVGKSSLLNALLPATEKQILVNTISDNSNLGQHTTTVSRLYHFQQGGDLVDSPGVREFGLWHLTPQQVTQGFIEFRDYLGHCKFRDCRHLNDPDCALRDAVERGDIAEQRFDNYHRILESLEQMKPRKSFFDD
SIO_010081: CCS41_RS01455
subclass of: SO_0000673
so part of: CCS41_RS01455
location: complement(304403..305446)
location: region:304403-305446:-1
so has part: feature:304403-305446:-1:exon

WP_072551108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304403-305446:-1:exon

CCS41_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: orn
locus tag: CCS41_RS01460
old locus tag: CCS41_01460
so part of: sequence
location: 305614..306156
location: region:305614-306156:1
so has part: feature:305614-306156:1:exon
subclass of: SO_0000010

position:305614:1
position: 305614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306156:1
position: 306156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305614-306156:1:exon

CCS41_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: orn
locus tag: CCS41_RS01460
old locus tag: CCS41_01460
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:NP_418586.4
GO function: GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligoribonuclease
translation: MAENENRLIWIDLEMTGLDPQKDRIIEIATLVTDANLSILAKGPELVVHQSDDQLALMDEWNVKTHTESGLFKRVRESTVTESQAELRTIAFLEEWVPKGKSPICGNSVGQDRRFLFRYMPILEAYFHYRYLDVSTLKELARRWQPEILEGFTKKNNHRALEDICDSVAELAYYREHFIR
SIO_010081: CCS41_RS01460
subclass of: SO_0000673
so part of: CCS41_RS01460
location: 305614..306156
location: region:305614-306156:1
so has part: feature:305614-306156:1:exon

WP_072551111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305614-306156:1:exon

CCS41_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01465
old locus tag: CCS41_01465
so part of: sequence
location: 306553..307575
location: region:306553-307575:1
so has part: feature:306553-307575:1:exon
subclass of: SO_0000010

position:306553:1
position: 306553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307575:1
position: 307575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306553-307575:1:exon

CCS41_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01465
old locus tag: CCS41_01465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MKIELTADQKITLEAQHRQSHDRRVCDRIRCVLLSADGWTPPMIAHSQLINETTVRRHLTDYHKLNKLKPENGGSDGYLNAEQTTSLVEHLTQPLYHHNHQIVAYIAGRWNITFTVSGLYKGLKQHGFSYKKPKGVPHKFAVEKQQQFIKTYSELKDAAGNDPILFIDAVHPTQATKISYGWIRKGQDKTIETTGSRTRLNIMGALNIQNVANPIIRDDETINSENVVHFLSAIRAHYPITTTAHVILEGAGYHRSQLVQDAALTLNIQLHYLPPYSPNLNPIERLWKVMNEQTRNNRYYPSKQSFKNDILNFFEVKLPQMASSLVSRLNDNFQALNPAS
SIO_010081: CCS41_RS01465
subclass of: SO_0000673
so part of: CCS41_RS01465
location: 306553..307575
location: region:306553-307575:1
so has part: feature:306553-307575:1:exon

WP_119797033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306553-307575:1:exon

CCS41_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01470
old locus tag: CCS41_01470
so part of: sequence
location: complement(307616..307996)
location: region:307616-307996:-1
so has part: feature:307616-307996:-1:exon
subclass of: SO_0000010

position:307616:-1
position: 307616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307996:-1
position: 307996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307616-307996:-1:exon

CCS41_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01470
old locus tag: CCS41_01470
inference: COORDINATES: protein motif:HMM:NF024751.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MKGKRCYGQHDWHAKARTNVIGAQLNGKLTTVCTFDCHINSDIFYAWVTQDLLLKSPPGAVLVMDNVSFHKRQDIQSARQKAGFILEYLPTYFPDMNPIEHKWAQAKALRRKRQCDIDTLFYDPLF
SIO_010081: CCS41_RS01470
subclass of: SO_0000673
so part of: CCS41_RS01470
location: complement(307616..307996)
location: region:307616-307996:-1
so has part: feature:307616-307996:-1:exon

WP_240313788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307616-307996:-1:exon

CCS41_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01475
old locus tag: CCS41_01475
so part of: sequence
location: complement(308088..308360)
location: region:308088-308360:-1
so has part: feature:308088-308360:-1:exon
subclass of: SO_0000010

position:308088:-1
position: 308088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308360:-1
position: 308360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308088-308360:-1:exon

CCS41_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01475
old locus tag: CCS41_01475
inference: COORDINATES: protein motif:HMM:NF013842.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MCGDSEPNALGWAKRIDPCLTRDKPATKINHAALLLDVETYPEASQYERAQRMGVSARGIGDALKRAGFSYKKNILSSQNRRPSAKRFSD
SIO_010081: CCS41_RS01475
subclass of: SO_0000673
so part of: CCS41_RS01475
location: complement(308088..308360)
location: region:308088-308360:-1
so has part: feature:308088-308360:-1:exon

WP_240313789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308088-308360:-1:exon

CCS41_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01480
old locus tag: CCS41_01480
so part of: sequence
location: complement(308397..309419)
location: region:308397-309419:-1
so has part: feature:308397-309419:-1:exon
subclass of: SO_0000010

position:308397:-1
position: 308397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309419:-1
position: 309419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308397-309419:-1:exon

CCS41_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01480
old locus tag: CCS41_01480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MKIELTADQKITLEAQHRQSHDRRVCDRIRCVLLSADGWTPPMIAHSQLINETTVRRHLTDYHKLNKLKPENGGSDGYLNAEQTTSLVEHLTQPLYHHNHQIVAYIAGRWNITFTVSGLYKGLKQHGFSYKKPKGVPHKFAVEKQQQFIKTYSELKDAAGNDPILFIDAVHPTQATKISYGWIRKGQDKTIETTGSRTRLNIMGALNIQNVANPIIRDDETINSENVVHFLSAIRAHYPITTTAHVILEGAGYHRSQLVQDAALTLNIQLHYLPPYSPNLNPIERLWKVMNEQTRNNRYYPSKQSFKNDILNFFEVKLPQMASSLVSRLNDNFQALNPAS
SIO_010081: CCS41_RS01480
subclass of: SO_0000673
so part of: CCS41_RS01480
location: complement(308397..309419)
location: region:308397-309419:-1
so has part: feature:308397-309419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308397-309419:-1:exon

CCS41_RS17000
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS17000
so part of: sequence
location: 309754..310011
location: region:309754-310011:1
so has part: feature:309754-310011:1:exon
subclass of: SO_0000010

position:309754:1
position: 309754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310011:1
position: 310011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309754-310011:1:exon

CCS41_RS17000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS17000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFPTKGFSLSPFVLNRVEVRRIRQEIFQNKTRFLYSRLDILAFVKAHIIHHDNSPLRDFWQSVLGYPRMKNIAIDIVFKGTNGG
SIO_010081: CCS41_RS17000
subclass of: SO_0000673
so part of: CCS41_RS17000
location: 309754..310011
location: region:309754-310011:1
so has part: feature:309754-310011:1:exon

WP_275887667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309754-310011:1:exon

CCS41_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01490
old locus tag: CCS41_01490
so part of: sequence
location: complement(310172..310540)
location: region:310172-310540:-1
so has part: feature:310172-310540:-1:exon
subclass of: SO_0000010

position:310172:-1
position: 310172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310540:-1
position: 310540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310172-310540:-1:exon

CCS41_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01490
old locus tag: CCS41_01490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MTYPLKFRQHVLAIKEQEKLTYAQTATRFCIGTASLMRWAKRIEPCLTRDKPASKIARAALILDVETYPDASQYERAQRMGVSARGICHALKRAGFSYKKNILSSKSQRPIPRRFSDQDPGL
SIO_010081: CCS41_RS01490
subclass of: SO_0000673
so part of: CCS41_RS01490
location: complement(310172..310540)
location: region:310172-310540:-1
so has part: feature:310172-310540:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310172-310540:-1:exon

CCS41_RS17005
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS17005
old locus tag: CCS41_01495
so part of: sequence
location: complement(310569..310886)
location: region:310569-310886:-1
so has part: feature:310569-310886:-1:exon
subclass of: SO_0000010

position:310569:-1
position: 310569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310886:-1
position: 310886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310569-310886:-1:exon

CCS41_RS17005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS17005
old locus tag: CCS41_01495
inference: COORDINATES: protein motif:HMM:NF014467.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tail fiber assembly protein
translation: MNEPLYLETLTDKNGYQYVNVPADPYQLTEMGFSWPEAMALHQQALTARQTKACAEKRRYLLREATTRIAPLQDALELGIATEDEIAALNAWKHYRVALNRLDIA
SIO_010081: CCS41_RS17005
subclass of: SO_0000673
so part of: CCS41_RS17005
location: complement(310569..310886)
location: region:310569-310886:-1
so has part: feature:310569-310886:-1:exon

WP_119797034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310569-310886:-1:exon

CCS41_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01500
old locus tag: CCS41_01500
so part of: sequence
location: complement(310890..312419)
location: region:310890-312419:-1
so has part: feature:310890-312419:-1:exon
subclass of: SO_0000010

position:310890:-1
position: 310890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312419:-1
position: 312419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310890-312419:-1:exon

CCS41_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01500
old locus tag: CCS41_01500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008500380.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MNEKFYAVLTHQGTAKLANAIALGTQLKITQMAVGDGGGSLPLPEASQTQLIGERRRAALNSLSLDPINTHQLIAEQVIPETEGGWWIREIGLFDSDDTLIALANCPETYKPQLQQGSGRTQTSRMILIVSSTAAVTLKIDPAVVLATRQYVDDKVIEVKVYADKLLSAHEKSRNHPDASKTEKGFVTLSSATDSDSETAAATPKAVKTAYQLARDANNNANSKLAKEQNGADILNKSLFIKNLGLTAAASMSVGTTANTLMKGDDTGVVRLDNWQKTVKAKDLDGEPRYTTTIDFTGLSTERYYPVWWQNPANAGANSWLTIHRPYHYDGHKNPFGAGVTHLAGLLVQLEGGDCGWGGDAHYLTIKRLHQSYRKTVKAIRFRMLSVVRPVDGNYPLHTGYTAGAVADCPTRSGCYLRGGLTYFVTSNFGGIFSSREEGKVEMSRHTTAGGGKTKTKVEDAVHIGVAFEVRYMAKSFAASDPNLGDDYEDATLPYSLDYDKRYEAKKGS
SIO_010081: CCS41_RS01500
subclass of: SO_0000673
so part of: CCS41_RS01500
location: complement(310890..312419)
location: region:310890-312419:-1
so has part: feature:310890-312419:-1:exon

WP_119797035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310890-312419:-1:exon

CCS41_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01505
old locus tag: CCS41_01505
so part of: sequence
location: complement(312416..313024)
location: region:312416-313024:-1
so has part: feature:312416-313024:-1:exon
subclass of: SO_0000010

position:312416:-1
position: 312416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313024:-1
position: 313024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312416-313024:-1:exon

CCS41_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01505
old locus tag: CCS41_01505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013184803.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein I
translation: MNNHLLPVGSSALEIAAAHACAGLSEIPLPLRQLWDADNCPLALLPYLAWAWSVDRWDESWSEATKRAVIKTAFYVHKHKGTIAALRRMVEPLGTLIRVIEWWQTNDPPGTFRLDIGVIETGITEAMYVELERLIEQAKPCSRHLIGLSINLDTQGSACVGAACYEGDELTVYPYFPETITVTGTAYHGAAVHVIDNLSITS
SIO_010081: CCS41_RS01505
subclass of: SO_0000673
so part of: CCS41_RS01505
location: complement(312416..313024)
location: region:312416-313024:-1
so has part: feature:312416-313024:-1:exon

WP_119797036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312416-313024:-1:exon

CCS41_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01510
old locus tag: CCS41_01510
pseudo: true
so part of: sequence
location: complement(313070..313976)
location: region:313070-313976:-1
so has part: feature:313070-313976:-1:exon
subclass of: SO_0000010

position:313070:-1
position: 313070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313976:-1
position: 313976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313070-313976:-1:exon

CCS41_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01510
old locus tag: CCS41_01510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001121472.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: baseplate assembly protein
SIO_010081: CCS41_RS01510
subclass of: SO_0000673
so part of: CCS41_RS01510
location: complement(313070..313976)
location: region:313070-313976:-1
so has part: feature:313070-313976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313070-313976:-1:exon

CCS41_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01515
old locus tag: CCS41_01515
so part of: sequence
location: complement(313976..314323)
location: region:313976-314323:-1
so has part: feature:313976-314323:-1:exon
subclass of: SO_0000010

position:314323:-1
position: 314323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313976-314323:-1:exon

CCS41_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01515
old locus tag: CCS41_01515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005161449.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GPW/gp25 family protein
translation: MTYLGMHRHSGKVITDIAHIRQSISDILITPQGSRVMRRAYGSLLSTLIDSPQSPALRLRMMAAIYSALLRWENRLTLSAIDITSDINGIMQIDLRGHRSDTGVPLRLSLPIGGK
SIO_010081: CCS41_RS01515
subclass of: SO_0000673
so part of: CCS41_RS01515
location: complement(313976..314323)
location: region:313976-314323:-1
so has part: feature:313976-314323:-1:exon

WP_119797037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313976-314323:-1:exon

CCS41_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01520
old locus tag: CCS41_01520
so part of: sequence
location: complement(314467..315015)
location: region:314467-315015:-1
so has part: feature:314467-315015:-1:exon
subclass of: SO_0000010

position:314467:-1
position: 314467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315015:-1
position: 315015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314467-315015:-1:exon

CCS41_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01520
old locus tag: CCS41_01520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006707759.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage baseplate assembly protein V
translation: MKTFNHAEYQRLLANLIRIGTVSAVDTAQGQCRVKTGELETDWLNWLTSHAGRVKSWSAPSVGEQVLILSLGGELTTAFVLPAVFSDVNPAPSASPDAIMLTFPDGAQFNYEPKTGHLALTGIKTATITASTAITLDTPVVTCTQQLITDSLQVNQGGKITGEFTHSGGIAGAVSVDYENQK
SIO_010081: CCS41_RS01520
subclass of: SO_0000673
so part of: CCS41_RS01520
location: complement(314467..315015)
location: region:314467-315015:-1
so has part: feature:314467-315015:-1:exon

WP_119797038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314467-315015:-1:exon

CCS41_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01525
old locus tag: CCS41_01525
so part of: sequence
location: 315173..315406
location: region:315173-315406:1
so has part: feature:315173-315406:1:exon
subclass of: SO_0000010

position:315173:1
position: 315173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315406:1
position: 315406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315173-315406:1:exon

CCS41_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01525
old locus tag: CCS41_01525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706172.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopG family transcriptional regulator
translation: MRTTLAIDDDILAAAKGLAARQNKSLGAVISSLARQALRPTHVPSYPKRNGVPLLLVRSNGMLVTPELVNQLRDELP
SIO_010081: CCS41_RS01525
subclass of: SO_0000673
so part of: CCS41_RS01525
location: 315173..315406
location: region:315173-315406:1
so has part: feature:315173-315406:1:exon

WP_119797039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315173-315406:1:exon

CCS41_RS16230
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16230
so part of: sequence
location: 315406..315606
location: region:315406-315606:1
so has part: feature:315406-315606:1:exon
subclass of: SO_0000010

position:315606:1
position: 315606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315406-315606:1:exon

CCS41_RS16230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFLLDVNVLIALIDPAHIQHDAAHNWFKKQGQQAWATCPLTENGVLRIGMNGIQIHQAHLQWSQN
SIO_010081: CCS41_RS16230
subclass of: SO_0000673
so part of: CCS41_RS16230
location: 315406..315606
location: region:315406-315606:1
so has part: feature:315406-315606:1:exon

WP_240313790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315406-315606:1:exon

CCS41_RS16235
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16235
so part of: sequence
location: 315606..315833
location: region:315606-315833:1
so has part: feature:315606-315833:1:exon
subclass of: SO_0000010

position:315833:1
position: 315833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315606-315833:1:exon

CCS41_RS16235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16235
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTLCSLPGHCFWPDNISLLDTEKLDVTRLLTSAQLTDSYLLALACAHNGQLATFDRRLVTDAVYNGARSLHLIQ
SIO_010081: CCS41_RS16235
subclass of: SO_0000673
so part of: CCS41_RS16235
location: 315606..315833
location: region:315606-315833:1
so has part: feature:315606-315833:1:exon

WP_240313791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315606-315833:1:exon

CCS41_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01535
old locus tag: CCS41_01535
so part of: sequence
location: complement(315861..316307)
location: region:315861-316307:-1
so has part: feature:315861-316307:-1:exon
subclass of: SO_0000010

position:315861:-1
position: 315861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316307:-1
position: 316307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315861-316307:-1:exon

CCS41_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01535
old locus tag: CCS41_01535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005161432.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage virion morphogenesis protein
translation: MNTRDQLNQALASLLKQLSPASRKSFTRQIAKQLRERQKQRIQAQQEPDGTPFAPRKKKRRDKNGRIKRKMFSKLRTTRFLKSHSNADEAMVSFASQVTQVARVHHYGLRDKVTRNGVTVRYESRPLLGLTDRDIEMITDLALAHLVG
SIO_010081: CCS41_RS01535
subclass of: SO_0000673
so part of: CCS41_RS01535
location: complement(315861..316307)
location: region:315861-316307:-1
so has part: feature:315861-316307:-1:exon

WP_119797697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315861-316307:-1:exon

CCS41_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01540
old locus tag: CCS41_01540
so part of: sequence
location: complement(316304..316771)
location: region:316304-316771:-1
so has part: feature:316304-316771:-1:exon
subclass of: SO_0000010

position:316304:-1
position: 316304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316771:-1
position: 316771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316304-316771:-1:exon

CCS41_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01540
old locus tag: CCS41_01540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013649749.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MLKPTLLRKALTDAVPYLKQNPDSLHIFIDRGAIVSTLASSLSFEYQYTLNLIITDCADDADTLFVPILHWLRRHQPDIMAQHATHAEGLTFEADHLNNSLRDISINLRLTERVIVKEEQGALQVTHLDEPLDPDTTHRRYELFIKEEKVAQWQQ
SIO_010081: CCS41_RS01540
subclass of: SO_0000673
so part of: CCS41_RS01540
location: complement(316304..316771)
location: region:316304-316771:-1
so has part: feature:316304-316771:-1:exon

WP_119797040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316304-316771:-1:exon

CCS41_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01545
old locus tag: CCS41_01545
so part of: sequence
location: complement(316778..317248)
location: region:316778-317248:-1
so has part: feature:316778-317248:-1:exon
subclass of: SO_0000010

position:316778:-1
position: 316778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317248:-1
position: 317248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316778-317248:-1:exon

CCS41_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01545
old locus tag: CCS41_01545
inference: COORDINATES: protein motif:HMM:NF015218.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysis protein
translation: MLNRLVTGVLVLIFSGLLLTAFYYHEETVEKDIAIKTITQERDTAFSLIQALEKQRQQLAAIDSHYTQELTDAKTQLAALERDVNDKHRRMQLNATCPKPVPHAATAARLDDGTRARLNDTAIKHYFHLRERIKTATQQIAGLQAYIQTVCLTHPG
SIO_010081: CCS41_RS01545
subclass of: SO_0000673
so part of: CCS41_RS01545
location: complement(316778..317248)
location: region:316778-317248:-1
so has part: feature:316778-317248:-1:exon

WP_119797041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316778-317248:-1:exon

CCS41_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01550
old locus tag: CCS41_01550
so part of: sequence
location: complement(317241..317759)
location: region:317241-317759:-1
so has part: feature:317241-317759:-1:exon
subclass of: SO_0000010

position:317241:-1
position: 317241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317759:-1
position: 317759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317241-317759:-1:exon

CCS41_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01550
old locus tag: CCS41_01550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004712366.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysozyme
translation: MRPLSKKIQTLIVAGASTAILLAQFLQEKEGNRLSAYQDGANVWTICRGATRVDGQPVRQGLQLSREKCEQVNKMEVDKAIAWVEQHIKVPLTDVQKAGIASFCPYNIGAGKCTASTFYRKLNAGDTLGACAEIKRWIFDGGKDCRIRANNCAGQPLRRAQESVLSCWGLDA
SIO_010081: CCS41_RS01550
subclass of: SO_0000673
so part of: CCS41_RS01550
location: complement(317241..317759)
location: region:317241-317759:-1
so has part: feature:317241-317759:-1:exon

WP_119797042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317241-317759:-1:exon

CCS41_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01555
old locus tag: CCS41_01555
so part of: sequence
location: complement(317743..317994)
location: region:317743-317994:-1
so has part: feature:317743-317994:-1:exon
subclass of: SO_0000010

position:317743:-1
position: 317743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317994:-1
position: 317994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317743-317994:-1:exon

CCS41_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01555
old locus tag: CCS41_01555
inference: COORDINATES: protein motif:HMM:NF027406.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HP1 family phage holin
translation: MDRHTSWLSYSSAWLLTCLGAWTLQDWATLIGVALALGTYLNNRYYKRREDHRRQELHNLQRQQLTERQRKQRTQGGQNAPTE
SIO_010081: CCS41_RS01555
subclass of: SO_0000673
so part of: CCS41_RS01555
location: complement(317743..317994)
location: region:317743-317994:-1
so has part: feature:317743-317994:-1:exon

WP_119797043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317743-317994:-1:exon

CCS41_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01560
old locus tag: CCS41_01560
so part of: sequence
location: complement(318013..318216)
location: region:318013-318216:-1
so has part: feature:318013-318216:-1:exon
subclass of: SO_0000010

position:318013:-1
position: 318013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318216:-1
position: 318216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318013-318216:-1:exon

CCS41_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01560
old locus tag: CCS41_01560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000868168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tail protein X
translation: MKIFAQQNDTVDALCWRYYQRTEGVTEQIFACNPGLADAGVILPHGYGVDMPDPTPSPLKQHLQLWD
SIO_010081: CCS41_RS01560
subclass of: SO_0000673
so part of: CCS41_RS01560
location: complement(318013..318216)
location: region:318013-318216:-1
so has part: feature:318013-318216:-1:exon

WP_119797044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318013-318216:-1:exon

CCS41_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01565
old locus tag: CCS41_01565
so part of: sequence
location: complement(318315..318794)
location: region:318315-318794:-1
so has part: feature:318315-318794:-1:exon
subclass of: SO_0000010

position:318315:-1
position: 318315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318794:-1
position: 318794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318315-318794:-1:exon

CCS41_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01565
old locus tag: CCS41_01565
inference: COORDINATES: protein motif:HMM:NF017713.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: head completion/stabilization protein
translation: MVSIAINPTVDEAGIKTEQFINNNGFWPGIDLQHYRDAMRQDGTLTPARLLEAAQVALNETHDRLTEWRKKQQQAGYPSLVEVPAKQVGNESSCLLLYRRAVYCLIQATVTERFRSVDATASGTKRAEAREETIDHLRRDAAWAIQDIQGFTRTTIELI
SIO_010081: CCS41_RS01565
subclass of: SO_0000673
so part of: CCS41_RS01565
location: complement(318315..318794)
location: region:318315-318794:-1
so has part: feature:318315-318794:-1:exon

WP_119797045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318315-318794:-1:exon

CCS41_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: gpM
locus tag: CCS41_RS01570
old locus tag: CCS41_01570
so part of: sequence
location: complement(318892..319545)
location: region:318892-319545:-1
so has part: feature:318892-319545:-1:exon
subclass of: SO_0000010

position:318892:-1
position: 318892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319545:-1
position: 319545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318892-319545:-1:exon

CCS41_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: gpM
locus tag: CCS41_RS01570
old locus tag: CCS41_01570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011192314.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0019069 - viral capsid assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage terminase small subunit
translation: MSNPVRRHKQFVAAQQAASSRETAGLRHASTYDLLLFKLQQDLLHLKSIVSISRKAEVKRRLLPTYSPWVAGVLANGTGTQDAILMRMLIWQLDVGDLTRALDIADYAIKHDLATPDSFQRSTACLIAEEVAALASRTWLKKRSLDTVQLLRAQHLLQGQDMPDPVKARLHKMVGYALRQDGKYEPACLHLKQALTLDSRSGVKTDIKQLEKLLQAA
SIO_010081: CCS41_RS01570
subclass of: SO_0000673
so part of: CCS41_RS01570
location: complement(318892..319545)
location: region:318892-319545:-1
so has part: feature:318892-319545:-1:exon

WP_119797046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318892-319545:-1:exon

CCS41_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01575
old locus tag: CCS41_01575
so part of: sequence
location: complement(319552..320607)
location: region:319552-320607:-1
so has part: feature:319552-320607:-1:exon
subclass of: SO_0000010

position:319552:-1
position: 319552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320607:-1
position: 320607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319552-320607:-1:exon

CCS41_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01575
old locus tag: CCS41_01575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413679.1
GO component: GO:0019028 - viral capsid [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019069 - viral capsid assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage major capsid protein, P2 family
translation: MKKHTRSQFNQYIHQVATLNALENTTDIAAKFTVEPSIAQRLEAKQQESSSFLSKINLFPVDEQTGEKVGLGIERPIASTTHTGEKERSPADPTGLDNHPYRCTQTNFDTALSYQKLDMWAKFPHFQQLIRDALIKRQALDRIMIGFNGIKRAATSNATQNPLLQDVNIGWLQHIRAQAASQVMNKIINAQGAVTSDNIRIGQGGDFANLDALVMNAVDELIETWFQDDTELVVICGRALLADKYFPIINQNQANSESLAADLIISQKRIGGLPAVRAPYFPANALLITRLDNLSIYWQEGTRRRAIIDNPKRDRVENFESVNEAYVVEDYGCTALIENIVIGDITPPAED
SIO_010081: CCS41_RS01575
subclass of: SO_0000673
so part of: CCS41_RS01575
location: complement(319552..320607)
location: region:319552-320607:-1
so has part: feature:319552-320607:-1:exon

WP_119797047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319552-320607:-1:exon

CCS41_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01580
old locus tag: CCS41_01580
so part of: sequence
location: complement(320609..321424)
location: region:320609-321424:-1
so has part: feature:320609-321424:-1:exon
subclass of: SO_0000010

position:320609:-1
position: 320609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321424:-1
position: 321424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320609-321424:-1:exon

CCS41_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01580
old locus tag: CCS41_01580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413680.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GPO family capsid scaffolding protein
translation: MAKSTFFRAAVEGATSDGRSISRQHIIEMAESYNPSYRGARANLEHIKSLLPDSPFRAYGDIVAAKYEEISAGPLKGKIALLVQVDATEELVKLRENRQKVYTSIEYLPKFADTGKAYLTGIAFTDNPASLGAEMLTFCANSQHNPLASRKSQAEALFSAAEEITLEFETEQKPALFNTVKALFGKKHLSDDARFMDIHQAVSLIANHQQQLTEKLADLMALKNTVTALQTEQHTTQHSLTALNTQLLRADQRFTPRPVTTGANPTHLTDC
SIO_010081: CCS41_RS01580
subclass of: SO_0000673
so part of: CCS41_RS01580
location: complement(320609..321424)
location: region:320609-321424:-1
so has part: feature:320609-321424:-1:exon

WP_119797048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320609-321424:-1:exon

CCS41_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01585
old locus tag: CCS41_01585
so part of: sequence
location: 321590..323383
location: region:321590-323383:1
so has part: feature:321590-323383:1:exon
subclass of: SO_0000010

position:321590:1
position: 321590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323383:1
position: 323383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321590-323383:1:exon

CCS41_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01585
old locus tag: CCS41_01585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004185719.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: terminase family protein
translation: MDTFTTDRLTTDTLTAPPHLDPRRQAMYLYWQGLPVARIAEILGIKATTLHSWKRRDQWDKYGALEKMQLTTAVRYCQLVAIEAKSGRDFKELDALGRQAERHARIGKYNNGGNEADLNPNRAALLRGKRKASVKNVFSEEQIGQLATLFQASLFAYQRAWYQAGLDDRFRLRNLLKSRQIGATFYFAREALLDALTTGRNQMFISASKAQAHQFKHYIVDFAAEVGVALRGDPICLPNGAELHFLGTNTNTAQGRSGCLYVDEYFWIPGFKKLRRAASGMASQKRYRQTYFSTPSSVNHEAYPFWNGTLFNQGREKNQRIEVDTSYPHLAAGALCADGQYKQIVTLEDALAGGCDRFDIAQLWRENSDDDFDNLFMCQFIDDAHSVFPMKEMQRCMVDSWEHWPDVKLLAARPYGHQPVWIGYDPASTGDASGCAVMAPPKVAGGKFRVLERFQWHGMDFSEQARHIQTLTERYNVSYIGIDDTGLGRSVTQLVRQFFPAVQAIHYTVEMKTDLIYKAKDVITSGRLEFDAGAMDIAKAFMSIRKTLTASGQRATYVTNRAEGTSHGDVAWAIMHALFNEPLAGITVNNSSFMEPF
SIO_010081: CCS41_RS01585
subclass of: SO_0000673
so part of: CCS41_RS01585
location: 321590..323383
location: region:321590-323383:1
so has part: feature:321590-323383:1:exon

WP_119797049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321590-323383:1:exon

CCS41_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01590
old locus tag: CCS41_01590
so part of: sequence
location: 323383..324387
location: region:323383-324387:1
so has part: feature:323383-324387:1:exon
subclass of: SO_0000010

position:324387:1
position: 324387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323383-324387:1:exon

CCS41_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01590
old locus tag: CCS41_01590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004706407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage portal protein
translation: MANRKQNTMQRVEAFTFGDPVPMLDQRDMLDYLECAVVDHWYEPPVSFHGLAKSFRAAVHHSSPIYMKRNLLVSLFQPHRWLSKQDFSRYALDFLVFANAFLEVRTNRLGGVLKLVPSPAKYTRCGVEAGTHWYVQSWAAPHLFAENSVFHLLDPDINQEIYGVPDYLAALNSTWLNEAATLFRRKYYLNGSHAGFILYMNDAAHKQEDIDRLRQALKDSKGPGNFRNLFMYAPGGKKDGLQLIPLAEVAAKDEFINIKNVTRDDQLAAQRVPPQLMGILPHNTGGFGDIEKAARVFAINELAPLQERLSEINDWLGEEVIRFKPYELVDKASV
SIO_010081: CCS41_RS01590
subclass of: SO_0000673
so part of: CCS41_RS01590
location: 323383..324387
location: region:323383-324387:1
so has part: feature:323383-324387:1:exon

WP_119797050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323383-324387:1:exon

CCS41_RS17010
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS17010
so part of: sequence
location: 324629..324751
location: region:324629-324751:1
so has part: feature:324629-324751:1:exon
subclass of: SO_0000010

position:324629:1
position: 324629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324751:1
position: 324751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324629-324751:1:exon

CCS41_RS17010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS17010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTALWDDKAIRVVKNTGRARHACAGVNHFSAQEGDLLTDC
SIO_010081: CCS41_RS17010
subclass of: SO_0000673
so part of: CCS41_RS17010
location: 324629..324751
location: region:324629-324751:1
so has part: feature:324629-324751:1:exon

WP_275887668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324629-324751:1:exon

CCS41_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01595
old locus tag: CCS41_01595
so part of: sequence
location: complement(324816..325097)
location: region:324816-325097:-1
so has part: feature:324816-325097:-1:exon
subclass of: SO_0000010

position:324816:-1
position: 324816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325097:-1
position: 325097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324816-325097:-1:exon

CCS41_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01595
old locus tag: CCS41_01595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005286355.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MIYKLKFEKRALKEWDKLGHTLKQQLKNKLSERLDNPHIPSARLSGKTNRYKIKLRASGYRLVYEVNDSDVVLLVIAIGKRAGDDIYHSADQR
SIO_010081: CCS41_RS01595
subclass of: SO_0000673
so part of: CCS41_RS01595
location: complement(324816..325097)
location: region:324816-325097:-1
so has part: feature:324816-325097:-1:exon

WP_119797051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324816-325097:-1:exon

CCS41_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01600
old locus tag: CCS41_01600
so part of: sequence
location: complement(325087..325338)
location: region:325087-325338:-1
so has part: feature:325087-325338:-1:exon
subclass of: SO_0000010

position:325087:-1
position: 325087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325338:-1
position: 325338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325087-325338:-1:exon

CCS41_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01600
old locus tag: CCS41_01600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000121741.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid stabilization protein
translation: MAHQILAEMAASITDLKRNPMGTVADAEGEAIAILNRNQPAFYCVPPKLYAYYQELAEDAELNRIADERMANPEFVSVNLDDL
SIO_010081: CCS41_RS01600
subclass of: SO_0000673
so part of: CCS41_RS01600
location: complement(325087..325338)
location: region:325087-325338:-1
so has part: feature:325087-325338:-1:exon

WP_119797052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325087-325338:-1:exon

CCS41_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01605
old locus tag: CCS41_01605
so part of: sequence
location: complement(325545..327632)
location: region:325545-327632:-1
so has part: feature:325545-327632:-1:exon
subclass of: SO_0000010

position:325545:-1
position: 325545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327632:-1
position: 327632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325545-327632:-1:exon

CCS41_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01605
old locus tag: CCS41_01605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011192929.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication endonuclease
translation: MTWEPFYSKTRPLPMTLYSEEIPIPAPRSLNPAPCHIFSPLMWEREQLPAILEPRIEAYWQRQVAQANHLAHLDHIKRKWQADPELAIQADLRRQPKFIQQPLQQRLDYLRREGGEARAKTFLLEVIKPVLHRLETVRKKQRTEDYQRVTYYPALRVLLDLPTLMQKEVKNVAARVAGHMELFFCACAEVLPDDNTDPDKILRLYQRVAAEAKRFSITPPHWHSLREHIQHRGKMPYHLIPGALARLCCADWWARKLWRLRCEWREEQYRAICLVHKQASAYVSYDALTRKREQDRRAREFIRSHELVNEDGVTLDMEKVVNASTSNPHLRHLEMMTTARGLENLAEQRGDYAMFYTLTCPSRYHATLSCGKPNPKWATHTVRESSDYLVALFAGVRKKMNKMGLRWYGVRVAEPHHDGTVHWHLLCFMARKDRVAITAVLREFAIRSDREELGKNIKPRFDVKPVLKSKGTPTSYLAKYISKNMDSTVLKNAIDKATGEPLLSIETGKPLNESVEHAVAWASLHRVRQFQFFGIPSRQTYRELRLLAGQLQRKSTSKKSGQLLDDKPMDEVLAAADAGCMATYIVKQGGVFIPRKEHTVRTAYIECEAPNAYGEQGVKIYGVWSPRLGMASRICTHVDTWKKVRKAKSDKQPVHPVNQAESDLGLGVALQDGVTVPWTRTRTRTRTRGNNCPLA
SIO_010081: CCS41_RS01605
subclass of: SO_0000673
so part of: CCS41_RS01605
location: complement(325545..327632)
location: region:325545-327632:-1
so has part: feature:325545-327632:-1:exon

WP_119797053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325545-327632:-1:exon

CCS41_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01610
old locus tag: CCS41_01610
so part of: sequence
location: complement(328114..328461)
location: region:328114-328461:-1
so has part: feature:328114-328461:-1:exon
subclass of: SO_0000010

position:328114:-1
position: 328114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328461:-1
position: 328461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328114-328461:-1:exon

CCS41_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01610
old locus tag: CCS41_01610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413896.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5347 family protein
translation: MANTGPARVVPLNLEQRQCSLKHIALLWGLFPDAKYKGVIPALITEMQETDPQMKGALYYLAGIEKKKHALAFKQLSPEEQMNIIDAIIRLRAVISLLPDRVTYIDCDPLPNKTE
SIO_010081: CCS41_RS01610
subclass of: SO_0000673
so part of: CCS41_RS01610
location: complement(328114..328461)
location: region:328114-328461:-1
so has part: feature:328114-328461:-1:exon

WP_119797054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328114-328461:-1:exon

CCS41_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01615
old locus tag: CCS41_01615
so part of: sequence
location: complement(328403..328606)
location: region:328403-328606:-1
so has part: feature:328403-328606:-1:exon
subclass of: SO_0000010

position:328403:-1
position: 328403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328606:-1
position: 328606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328403-328606:-1:exon

CCS41_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01615
old locus tag: CCS41_01615
inference: COORDINATES: protein motif:HMM:NF022348.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METPDGRHVQPNAQDVQFIKGMSTPVINKPRRRWFCTFDGDFCLIRRGYGEYRASTCRPAEFRTASM
SIO_010081: CCS41_RS01615
subclass of: SO_0000673
so part of: CCS41_RS01615
location: complement(328403..328606)
location: region:328403-328606:-1
so has part: feature:328403-328606:-1:exon

WP_240313878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328403-328606:-1:exon

CCS41_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01625
old locus tag: CCS41_01625
so part of: sequence
location: complement(329324..329680)
location: region:329324-329680:-1
so has part: feature:329324-329680:-1:exon
subclass of: SO_0000010

position:329324:-1
position: 329324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329680:-1
position: 329680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329324-329680:-1:exon

CCS41_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01625
old locus tag: CCS41_01625
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIYTPTPISRHSQEYRGFTLVFLQKTVAQPITCYHLWLGDQSFGKVDTLAQATDYIDQLHQTKKIERNDNNELFNRTTDINHDYSRCDGLRCHAYYDGNPYIPKETRKINRLAAISHA
SIO_010081: CCS41_RS01625
subclass of: SO_0000673
so part of: CCS41_RS01625
location: complement(329324..329680)
location: region:329324-329680:-1
so has part: feature:329324-329680:-1:exon

WP_119797056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329324-329680:-1:exon

CCS41_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01630
old locus tag: CCS41_01630
so part of: sequence
location: complement(329677..330078)
location: region:329677-330078:-1
so has part: feature:329677-330078:-1:exon
subclass of: SO_0000010

position:329677:-1
position: 329677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330078:-1
position: 330078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329677-330078:-1:exon

CCS41_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01630
old locus tag: CCS41_01630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001353011.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Cox family DNA-binding protein
translation: MNHKHQLILQYGKQEVNMPELQLEHLFKIPDGITVSEFARRTGKTETSVRHMMDRRLLPMVTEREIIGATGSSRRIYILWNEWLEMVHMATISRPVESYGWKHTWIKRAQKLGLVGDLGLLTAVAHTTVSENT
SIO_010081: CCS41_RS01630
subclass of: SO_0000673
so part of: CCS41_RS01630
location: complement(329677..330078)
location: region:329677-330078:-1
so has part: feature:329677-330078:-1:exon

WP_240313792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329677-330078:-1:exon

CCS41_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01635
old locus tag: CCS41_01635
so part of: sequence
location: 330089..330313
location: region:330089-330313:1
so has part: feature:330089-330313:1:exon
subclass of: SO_0000010

position:330089:1
position: 330089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330313:1
position: 330313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330089-330313:1:exon

CCS41_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01635
old locus tag: CCS41_01635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004201485.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MLGINRDALWRYESGKTTPNIDVVTKILNHPRFEKYALWFMTGKIAPEFGQIAPALAHYKQEDEKFSRPDRKMD
SIO_010081: CCS41_RS01635
subclass of: SO_0000673
so part of: CCS41_RS01635
location: 330089..330313
location: region:330089-330313:1
so has part: feature:330089-330313:1:exon

WP_119797058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330089-330313:1:exon

CCS41_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01645
old locus tag: CCS41_01645
pseudo: true
so part of: sequence
location: complement(331095..332338)
location: region:331095-332338:-1
so has part: feature:331095-332338:-1:exon
subclass of: SO_0000010

position:331095:-1
position: 331095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332338:-1
position: 332338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331095-332338:-1:exon

CCS41_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01645
old locus tag: CCS41_01645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012885053.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase domain-containing protein
SIO_010081: CCS41_RS01645
subclass of: SO_0000673
so part of: CCS41_RS01645
location: complement(331095..332338)
location: region:331095-332338:-1
so has part: feature:331095-332338:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331095-332338:-1:exon

CCS41_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: ssrA
locus tag: CCS41_RS01650
old locus tag: CCS41_01650
so part of: sequence
location: complement(332534..332913)
location: region:332534-332913:-1
so has part: feature:332534-332913:-1:exon
subclass of: SO_0000659

position:332534:-1
position: 332534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332913:-1
position: 332913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332534-332913:-1:exon

CCS41_RS01650
type: Transfer Messenger RNA
subclass of: SO_0000584
RO_0002162: 1878942
gene: ssrA
locus tag: CCS41_RS01650
old locus tag: CCS41_01650
product: transfer-messenger RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00023
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CCS41_RS01650
subclass of: SO_0000673
so part of: CCS41_RS01650
location: complement(332534..332913)
location: region:332534-332913:-1
so has part: feature:332534-332913:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332534-332913:-1:exon

CCS41_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: smpB
locus tag: CCS41_RS01655
old locus tag: CCS41_01655
so part of: sequence
location: complement(332963..333445)
location: region:332963-333445:-1
so has part: feature:332963-333445:-1:exon
subclass of: SO_0000010

position:332963:-1
position: 332963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333445:-1
position: 333445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332963-333445:-1:exon

CCS41_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: smpB
locus tag: CCS41_RS01655
old locus tag: CCS41_01655
inference: COORDINATES: similar to AA sequence:RefSeq:NP_311509.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SsrA-binding protein SmpB
translation: MIKKKTYKPGSATIAQNRRARHDYFIEEEFEAGLSLQGWEVKSLRAGKANISDSYVILKNGEAHLLGATITPLSVASTHVVCDPTRTRKLLLNKRELDSLFGRINREGYTVVALSMYWKNAWSKIKIGVAKGKKDHDKRDTIKDREWRVDKARIMKNANR
SIO_010081: CCS41_RS01655
subclass of: SO_0000673
so part of: CCS41_RS01655
location: complement(332963..333445)
location: region:332963-333445:-1
so has part: feature:332963-333445:-1:exon

WP_119797698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332963-333445:-1:exon

CCS41_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01660
old locus tag: CCS41_01660
so part of: sequence
location: 333594..334031
location: region:333594-334031:1
so has part: feature:333594-334031:1:exon
subclass of: SO_0000010

position:333594:1
position: 333594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334031:1
position: 334031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333594-334031:1:exon

CCS41_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01660
old locus tag: CCS41_01660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012105494.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RatA family toxin
translation: MPQINCAELVPFSAEQMYKLVNDVPSYPEFLPGCVSSRVIGASEREVTAAVEVAKAGISKTFTTRNTLMDNQSINMELVDGPFRKLLGGWHFTPLSPEACKVEFHLDFEFTNALIELAFGGFFFKELAGNMVQAFTQRAKEVYCA
SIO_010081: CCS41_RS01660
subclass of: SO_0000673
so part of: CCS41_RS01660
location: 333594..334031
location: region:333594-334031:1
so has part: feature:333594-334031:1:exon

WP_119797060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333594-334031:1:exon

CCS41_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01665
old locus tag: CCS41_01665
so part of: sequence
location: 334024..334314
location: region:334024-334314:1
so has part: feature:334024-334314:1:exon
subclass of: SO_0000010

position:334024:1
position: 334024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334314:1
position: 334314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334024-334314:1:exon

CCS41_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01665
old locus tag: CCS41_01665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012146394.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RnfH family protein
translation: MPEIRVEVVYALPERQYIRTLLLAQGSTVLQAIVASKLLQLRSDIDLEHNKVGLYGRPAKLGDVINDGDRVEIYRPLIADPKEWRRQRADKAQKNR
SIO_010081: CCS41_RS01665
subclass of: SO_0000673
so part of: CCS41_RS01665
location: 334024..334314
location: region:334024-334314:1
so has part: feature:334024-334314:1:exon

WP_119797061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334024-334314:1:exon

CCS41_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01670
old locus tag: CCS41_01670
so part of: sequence
location: complement(334463..336667)
location: region:334463-336667:-1
so has part: feature:334463-336667:-1:exon
subclass of: SO_0000010

position:334463:-1
position: 334463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336667:-1
position: 336667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334463-336667:-1:exon

CCS41_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01670
old locus tag: CCS41_01670
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLDIYLLDDYPDNHNPLNKKSSGGKIYADEIIQITDNENTEAYWWSRSCGILAPITLPTGKQEKIKPIWSGRNDYQRVSFWMSTGNQTPVDNENEEGKLYIKHDTEPYIDYSKLGLLKHVGHTPERLYTEDTQGNIYAIDVSGRAYLSTIGSRWLTNHQDDLSTAFTAFTALLALNDNEADERFHLPVLGIEGFLCGVSTHNTKSLQTWYETHLKRFYFYYSSHGQKLHYLTHDTQEKAAFWDPHNKNLLYISSIALDEVQTFNPVIPENRLPPVEIVLYGVQKAWKNEELLYLENNQLIFFSDFKQSPYHFSLQGIAEGYISPYLLSYQLASALKKEFYRVFSDENRAYPCDHYAIWQTHIPNTPPGAQDLFTINFTERKTQIWKMLIEKIVKRTPECLSVTPKNMWSFLAAHLAQLLPKARLHVDDINNMIREAFIAIRKSGACNIELKPKRLLRFSQYGWYNTQLSALFMIPKERDKHVDYQYLGLSRDGYHSYVSAEEKRVYKISGLQEWEMAEDWPAGWQKIADLLCIKRFGDELIYIEKKSTLSGLQKNLAFSAYFLADIKEIKTLYPRQKSATLLIQLQNWSAITFVIQAHNRAFEEDVELIIEKEDLGTYKVQREEQDLWIFQTQRKFALCVSNVLNTEPVPEDIDLKVVNESITMTIPLSQLIEKYNHQADQPETFYDEVVYPIYILSDLLNSPPKNLFEISCARRVLVKSFVKNALKMLIYSM
SIO_010081: CCS41_RS01670
subclass of: SO_0000673
so part of: CCS41_RS01670
location: complement(334463..336667)
location: region:334463-336667:-1
so has part: feature:334463-336667:-1:exon

WP_119797062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334463-336667:-1:exon

CCS41_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01675
old locus tag: CCS41_01675
so part of: sequence
location: complement(336613..337896)
location: region:336613-337896:-1
so has part: feature:336613-337896:-1:exon
subclass of: SO_0000010

position:336613:-1
position: 336613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337896:-1
position: 337896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336613-337896:-1:exon

CCS41_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01675
old locus tag: CCS41_01675
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARSIYYEMQEIIPTKKLTNIWVTISENQFVQNQWALHFPWAKTKEDYSQEYTVFKKENPDWEKFGSGYEQFKEKITATEQAFRQDIIDNASEITYHMDNTSNLCQILVLPPVAFPLKLHLQGGNWLISALTLGVITLPSRKNTQLQIGGHEIELMLTADESIQIQCLIHEKVTLIQNITASEMNIASIVFDASESPANSLKAELNLLYEQQIKTLSDADRLPSLLIKNYQAETYQGNAHYVTKNGAILWVPAFAAFKFSIACARLLTIEAEKVFFYAHIDLNTQTNGKLKTRESPFQPTFWITHSRSSLLEFVNYSFLPLFTSSTGLKIRVKITQVGEQLTLIEHFKKGASSVAVHYAINITPTAHNPLLLRKIQCSSDIFSVLVQNELFFGERSSQTPLSSCEVCCVPCCWTFICWMIIPITITH
SIO_010081: CCS41_RS01675
subclass of: SO_0000673
so part of: CCS41_RS01675
location: complement(336613..337896)
location: region:336613-337896:-1
so has part: feature:336613-337896:-1:exon

WP_205411447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336613-337896:-1:exon

CCS41_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01680
old locus tag: CCS41_01680
so part of: sequence
location: complement(337959..342629)
location: region:337959-342629:-1
so has part: feature:337959-342629:-1:exon
subclass of: SO_0000010

position:337959:-1
position: 337959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342629:-1
position: 342629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337959-342629:-1:exon

CCS41_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01680
old locus tag: CCS41_01680
inference: COORDINATES: protein motif:HMM:NF024321.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcdA/TcdB catalytic glycosyltransferase domain-containing protein
translation: MDKETLIREIQDVLGIDAPIFYKIKLLLNEYQRLSITGDVQELCLLARIQTELELLLIGGNKFADPPSRPKIQTALNHVLQKKQHLLTPVEKKIHFVWIGTLGSFQIAYMKTWAYYNPDYEIQLWHDPHALLSGILRQKIKLYAGTLQGIGNDIDIESTASIHVRAIIDLQNEFYKDYFLPGMRQQQTFDDCATQFLLAKGWSTTDQLDEIKSTHAYSFDQAINALNVARSRATQAQPKMPIRLVEINATLFQNTAKKDYYKYYLKELGLRQNSASASDKVRYMILYKEGGIYLDVDLLPHPDNRLWQKIKTDLFDNISKRKIINDHYPQNEFSYMRGVFWFYLADVLESIFTGKALALEENTYHRQAYVEMMLMNSLLRACNDDSLLPLPSYQQLALDINQGNQDPFFKTVQLLSPEINHIVESLSKDSLMIPLGELHVLPDGIGYIKHPYVEGEITNSCLFASKDSLAMLEILNIVLQRDIKIELHQIDRLDVSRPPGPSSDKYSTLDINLMMYRYDGWIEGAVATVYSSGPKIIVAWLAEYEKKFSASHPELTAYFEVFKQQFFVFTHISYNTEENLQSTWIGSAMMSRDHYYEKPSRYQSQLIIQFDNQPSTEAAAHWLYNKRKEISIWVKIVQSGRQERIMINGTIPQGFQFYDNQADKKARILLIGQGYNKQLSGLSGEDVAQKIINVLASQVLKNCIDRNLVPGDQTPDVISRIHVVASDIEPVKSHSPSSSNGWNSSLSRGFTYQLLAHLRKSRIEIYEGVAVCDAIIGVDVVGRKWVGSWDVLSEKILWRSSQEAYKWVGVLTPSGNAVKFGKTLLEKDILTQIRPWIDINKHGRFGLFSVYAFSDGLLPAKMSDLFCEPDFIHLTDQFGNIAGHRILMADVSALFSGMKRGELSGGIKIRTAIVDDRADQLRILRDILRQVIFNEKPEQWLAWLASSNLVLDKTQQRLQTLLISHPEYYASLKTSVDEDLFDFYYMDLAQKNAYYPIINYLGSEAKNIKVIYLGYMERRLSILFKKKVFDTPIPDSSLEYFEENVLKLSGDHTFFIYYTAQNTNKKSTGIEVFQSDLRNIASELTPVTGRKKTIPLAESYLNSALIFENLTKEIALLGRAVPEGSLVLLQKVTPVSGRNTFRVPFLNPKTGVLIEIETEQTIFKQVRDSLEKSYRIPLSNEDNLALAVNHYHSRVALDLSSWLFNKIFVARFLIEQIKSGKGLFAMPDTRGLPNKFGQSLALQHYVGVVGMASDLLDDAARLSYFTLSRVVSVQAVEFSLHRIAYFSAELLSGTTETSRYAFLIKGILQKDHIQHVVKKLVNGISKTFMGLGLILSATDIVLTTSALLNAPNSDAQMILGIQLGFSVLGFGLQLFAIGAALLGATSLALALGTAVLVVAIIGVVIIFLLEHFQQKINTIKASAQFFKNLKKSWKQGYVLKQGCFIHEGPASITLLELGVLGRAFRIAFGTQRYQAYGSTFIGGIQSELRKLNVLKPFHRADVSVTELPPNNEQDDILTHNLVLPCVAQTDYDFSYDRGVAKIEEYGSSEAFAPLEN
SIO_010081: CCS41_RS01680
subclass of: SO_0000673
so part of: CCS41_RS01680
location: complement(337959..342629)
location: region:337959-342629:-1
so has part: feature:337959-342629:-1:exon

WP_119797064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337959-342629:-1:exon

CCS41_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01685
old locus tag: CCS41_01685
so part of: sequence
location: complement(342727..347976)
location: region:342727-347976:-1
so has part: feature:342727-347976:-1:exon
subclass of: SO_0000010

position:342727:-1
position: 342727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347976:-1
position: 347976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342727-347976:-1:exon

CCS41_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01685
old locus tag: CCS41_01685
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRILRDVLQQVTFNERQDQWLTWLASSRLVEEKTQQKLRQLLTDNPHYYAQLRASADEELFDFYYVDFAQKNAYYPIINHLGTESQNIILIYLGNLGKRLQALMKKIAQPGSLVSTSSLDFFQENILKLSSEQTHLVYSVWKTGQGTVSTAIFQANVIEIAADLPPMIPREKTLLLAGSYLNSAFLFENLTEEIALLGRSVPADSLALLQKITPVNGQNKSKVPFLHPNTGVMTEVETNKNAFRQARDSLEKNYLIPWPDNSLMMFSEKGYSYKKAVDLSSWVFNKIFVAHFLIEQIKAGKGLFAQPETQGLPDGLRQTLVLQHYVGIMGMTNDLVDDAARLSYFTASKVLNRQTVVFSLRKMAYLSSELLASTTTTHRYAVLAKGILEKNQIQYALKKFTTNISKTAMGLGLAFSAIDVALTTEAFLNAPDNDSQMILGTQLGFSVLGFGIQLGAIGLALTGATSMALALGVLALVVAVTGVLVVLLLESFQKEANEVKTCALFLKTLKESRETGYLLKNGCFVHEGTACIRGLELGTDCKIIFGSQRYQAYRSTSSGSSHAKFERLNVLKEFKSSGVALTALPSGNDTGEVLNHNLVLPCIARTDYDFSYTMSGSRTIDDESDATFASLRALARNHEDFVFSHSKIVTGLAQVTYLHREIKAITASRRPTNIRVRINPLFQQQWALHFPWIENKEDYNEEHAIFKTENPDWQTMEYEEFKEKVKVQEQLFREEIINNARKITYHIDNAANTQQILVLPPPDFPLTLWLRGSNWLISALNLGTIAPLRRESDQLQIGRHKIYVALVADQNIRIQYLIHRKATLIQRITVSEMNIVSLVFDAADCPENSIKREIELLYQSQKNAYNDFSGLQHLLIKNYHEGDYHGNAHYLIKNKKLVFAPVLAPFKFATEYAQFLVEEANQAFFYANLDLHAESIAMATSGRINHPFQPTFWITHCGLSRLEFINYSFLPFFSSSTRLQIKTEIVEEQGQLMLIERYKKSNSSVEIQYAININFAANQPLLLRKIQFSQDIFSISRVGEWFSGSSQTTLEQLQALLCTTLLGNHTSISAGKIYADEMVYITNTENTKEYWWSRSCGILTSITLPTGKQEKIKPIWSGRTDYQRASFWTPVGDENAQGLKKLYVKRNTEPHIDYTIDYTKLGLLKHSGHTLERLYVEDAQGNTYALDVSGRAYLSRIGSAWLNTHRNDLPAAFEALFASNSDEVEERFHLPVLSVEGFLCTERGDAAAYDTHPLKTWYDKRLKRFYFYQPVDGQKPDYLSDDAQRKAALWDTRDKALLQVGSMSIGRAQTFNLVIPINRLPPAKRMMSHVQKAWKNEGLLYLQNGKLLFTSDFTQSPHDFSLHGITEEYLAPYLLSYQLTQALKEEFFTLFNSRTYSYHHYSSWQTRLADTSSGVPDLSAINFAKRKAQLRKILIDKIVTKTPQEESIAPRHMWAFLAAYLVNFLPQEQLRTRDLQKMIGEAFTTIQSRVVRISLHQKKCLQFGQYGWYDSQAAVLFIMPREKNERVNCQYLSMSRDGNSLYVSAEEQKVYKLAALQEWTTTHDWPAASQPVVTPLFIKRLGDELIFIEKVSPSSERQEIIPFSADFLSDMPEIKTLYPGRKSATLPIKMQDWSEIHVVIRAKGRGRGESVNLLINKNQLAEYKVQREGSDLWIFRGRRKFALCVTDVLDSDPMPEDITLKVATKVSEVTVTLGQLVEKYNNKPNQLETFYDEVIHPTYLLDDLLTDFI
SIO_010081: CCS41_RS01685
subclass of: SO_0000673
so part of: CCS41_RS01685
location: complement(342727..347976)
location: region:342727-347976:-1
so has part: feature:342727-347976:-1:exon

WP_162859945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342727-347976:-1:exon

CCS41_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01690
old locus tag: CCS41_01690
so part of: sequence
location: complement(347964..350729)
location: region:347964-350729:-1
so has part: feature:347964-350729:-1:exon
subclass of: SO_0000010

position:347964:-1
position: 347964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350729:-1
position: 350729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347964-350729:-1:exon

CCS41_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01690
old locus tag: CCS41_01690
inference: COORDINATES: protein motif:HMM:NF024321.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcdA/TcdB catalytic glycosyltransferase domain-containing protein
translation: MSKETLIHEIQNVLSTDKAVFYRIDQLLKEYQGSGTVGRDQELSVLARIQTELEKLLIYDYHLVNLQLMSKIRTILDKVLQEKHSRLTPVEKNIHFVWIGTIGSVQITYMKAWTYYNPDYAINLWHDPDALLAGVLRKKIKLYAGTLLGIGIGNLGPDSTASTSIRAVIDLQNEFYKGYLLAKNSPNETFDDCVTRFLWDKGWSTLDELEQIKSENKRAFNRAVAELNAAQSVRTPTQPNKPIRLREINTALFQNTAGKDYYKYYLKELGLRQNLASASDKARYMILYKEGGVYLDADLLPHPHGEVWQKIKTELLDNINKKKAINDTYPQDDPIYVKGVSLLELVDVFRSLFSNKLTMFETNIYRRRAYVEIVLMNSLLRACHGDGQPPKPDYQQLALDINRGNSDPFFNAIQPLFPEIDRIIETLPKKMLMDPLGELRILRDGIGYMEHPYVEGRITNSYLLAPKNSAALLKILDLVFQKDTKIEEDQIDRVNVSNPPSPPRRSSNEYSTLDINLMMYRHDGWIDGSVATVYSSGPRIITAWLTDYVTQHPELAAYFEVFKQQFFVFSNISRNTEEDMKSTWIGSAMISRNNYYEKPSIYKSQLIIQFDSDPSTEAAARWLYNKRRENSLWVKIIRNGGRIALHCHIPTNFKFYDNGAEEKARILLIGRGENGQLNGLNGDKIAEGIVKVLASPEVKPYIDARISFTDQSTNVISRISVVASGIESFDTEASDIRSGTSVSLNHGFTYQLLTQLRQAGLVIQGGISIRDAMIGVDTVGRKWTGNWDTLSKKILWHSAQSAYKWIGVLDPADKTVKFTKVVLGKDLLTQIRPWIDINKHGRFGLFSRYAFRDGLIPSKMSDTFNEDDFALFTDKFDHAVGHRVLMADVMALFSGMKKKELPGGRKFVQLLSTNALINCVY
SIO_010081: CCS41_RS01690
subclass of: SO_0000673
so part of: CCS41_RS01690
location: complement(347964..350729)
location: region:347964-350729:-1
so has part: feature:347964-350729:-1:exon

WP_119797066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347964-350729:-1:exon

CCS41_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01695
old locus tag: CCS41_01695
so part of: sequence
location: 350881..351294
location: region:350881-351294:1
so has part: feature:350881-351294:1:exon
subclass of: SO_0000010

position:350881:1
position: 350881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351294:1
position: 351294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350881-351294:1:exon

CCS41_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01695
old locus tag: CCS41_01695
inference: COORDINATES: protein motif:HMM:NF007257.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MQNPGQRIKNRRLKLQMTQKELAKKVGVAQVTVSQWERNNRSPRGDRLFSLVEVLNCEASWVLRGDVVPSIPLSKTPSAKNALTPKENVLLDLFSELPTSEQEQLIKTLKEKEQHYARFLTELLEPIRNLLCSPCFG
SIO_010081: CCS41_RS01695
subclass of: SO_0000673
so part of: CCS41_RS01695
location: 350881..351294
location: region:350881-351294:1
so has part: feature:350881-351294:1:exon

WP_119797067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350881-351294:1:exon

CCS41_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01700
old locus tag: CCS41_01700
so part of: sequence
location: 351652..351834
location: region:351652-351834:1
so has part: feature:351652-351834:1:exon
subclass of: SO_0000010

position:351652:1
position: 351652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351834:1
position: 351834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351652-351834:1:exon

CCS41_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01700
old locus tag: CCS41_01700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002215270.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AlpA family phage regulatory protein
translation: MTTRYIGLKEMCKLMGKSHPTLWRMYAKKGEFPKPSRSKSGCFLGWADNIYEEWVKDQKP
SIO_010081: CCS41_RS01700
subclass of: SO_0000673
so part of: CCS41_RS01700
location: 351652..351834
location: region:351652-351834:1
so has part: feature:351652-351834:1:exon

WP_119797068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351652-351834:1:exon

CCS41_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01705
old locus tag: CCS41_01705
so part of: sequence
location: 352441..353264
location: region:352441-353264:1
so has part: feature:352441-353264:1:exon
subclass of: SO_0000010

position:352441:1
position: 352441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353264:1
position: 353264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352441-353264:1:exon

CCS41_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01705
old locus tag: CCS41_01705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041621276.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKYEQIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKCKQGKGGRKPKLGLEDRLLMALEYLREYRTYFHVSRSDGVSESTCYETIKWIENTLIKHPDFALPGRKALLKSDREYELVLIDATETPIERPPKKQKQFYSGKKKRPTLKTQVIVDKKSKAVICTSFTHGRRHDFRLFKESGVRIHPEIKTVTDTGYQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRELSSQRVLNENVIGMIKRFKIVSDRYRNRRKRFGLRFNLIAAIYNMEIR
SIO_010081: CCS41_RS01705
subclass of: SO_0000673
so part of: CCS41_RS01705
location: join(352441..352828,352828..353264)
location: region:352441-353264:1
so has part: feature:352441-352828:1:exon
so has part: feature:352828-353264:1:exon

WP_240313793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352441-352828:1:exon

position:352828:1
position: 352828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:352828-353264:1:exon

CCS41_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01710
old locus tag: CCS41_01710
so part of: sequence
location: complement(353266..353673)
location: region:353266-353673:-1
so has part: feature:353266-353673:-1:exon
subclass of: SO_0000010

position:353266:-1
position: 353266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353673:-1
position: 353673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353266-353673:-1:exon

CCS41_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01710
old locus tag: CCS41_01710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEIDVKYHDCSQIVELVNKGLSEEKDTTRDEAFIANAIGSITTSMGIVSHEWSRWMNKHIEHAMNIGRYDIVKSLGERFWNEEYKYYSHFFIKSVLAISTNANKSDCDEERTGIVSHFLEKVADKKDNRPLRKL
SIO_010081: CCS41_RS01710
subclass of: SO_0000673
so part of: CCS41_RS01710
location: complement(353266..353673)
location: region:353266-353673:-1
so has part: feature:353266-353673:-1:exon

WP_162859946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353266-353673:-1:exon

CCS41_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01715
old locus tag: CCS41_01715
so part of: sequence
location: complement(353709..354095)
location: region:353709-354095:-1
so has part: feature:353709-354095:-1:exon
subclass of: SO_0000010

position:353709:-1
position: 353709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354095:-1
position: 354095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353709-354095:-1:exon

CCS41_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01715
old locus tag: CCS41_01715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSATFKKFLTNLSTKISNPTGNVDTEIHVPFSYIMGHACIKGNAKSFNEIMQTHLEGYTPKDANSTLVKVLSEILYIVDGSPVAMDFMKKLLDEGHEKQYFFIAKNFFRNPPGTTISISHSLTLYKKE
SIO_010081: CCS41_RS01715
subclass of: SO_0000673
so part of: CCS41_RS01715
location: complement(353709..354095)
location: region:353709-354095:-1
so has part: feature:353709-354095:-1:exon

WP_119797070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353709-354095:-1:exon

CCS41_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01720
old locus tag: CCS41_01720
so part of: sequence
location: complement(354132..354608)
location: region:354132-354608:-1
so has part: feature:354132-354608:-1:exon
subclass of: SO_0000010

position:354132:-1
position: 354132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354608:-1
position: 354608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354132-354608:-1:exon

CCS41_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01720
old locus tag: CCS41_01720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFLFFNERLNFMENTLTFQGTYYQRSIRTGDLETGSEWDVHKIWEKIKDFFSGTDSKKICVAFYNLFKNETVDKTEQAKALWELMLSLTDDSKDKLSLEPDLKNVDKVLVTLALPGESTAFSASIEISELAETYSTFFMKKRSSHDGLWCVDKLRYA
SIO_010081: CCS41_RS01720
subclass of: SO_0000673
so part of: CCS41_RS01720
location: complement(354132..354608)
location: region:354132-354608:-1
so has part: feature:354132-354608:-1:exon

WP_205411448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354132-354608:-1:exon

CCS41_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01725
old locus tag: CCS41_01725
so part of: sequence
location: complement(354884..362893)
location: region:354884-362893:-1
so has part: feature:354884-362893:-1:exon
subclass of: SO_0000010

position:354884:-1
position: 354884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362893:-1
position: 362893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354884-362893:-1:exon

CCS41_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01725
old locus tag: CCS41_01725
inference: COORDINATES: protein motif:HMM:NF024321.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcdA/TcdB catalytic glycosyltransferase domain-containing protein
translation: MSKETLIREIQDTLSTDIMIFHRVSLLLNEYQEFAASGSDQELSVLARMQTELEQLLNHEDRLISPHQTTKIQTVLDKVLQQKHSLLTPIEKNIHFVWIGAIGSAQIAYMKAWACYNPDYEIQLWHDPNALLADVLRKKIKLYAGTLLGIGNNMGPDSTASTNIRAIIDLQNEFYKDYFLPGIGHKQTFDDCATRFLLAKGWNTLEELNQIKSAHAHSFNTAITELQTAQRTGTKAQSKKPIRLCEINATLFQNATGKDYYQYYLKELGLRQNLASASDKARYMILYKKGGVYLDADLLPHPHSAVWQKIEIELLSNLNKRKIINAAYLQSDSSYMTGVFWMHLVDVLRSIFTGRSIAFDTNVCRRRAYVEIVLMNSLLRACNGDGQPPKPDYHQLAHDISQGNLDPFFDAVQPLFAEIDQIIATLPKEILMDPLGELRMLQDGLGYMEHPYVEGRITNSYLFAPKDSSAMLQMLDLVFQRDVKIAENHLDRLDVSNPPTPTRRHSTLDVNLMMYRYDGWIAGSVATVYSSGPKIITDWLANYVASHPRLAAHFEVFKQQFFIFSNISRDTEEDMKSTWIGSAMMTRDSYYEKPSSYQSQLVLQFDSDPATEAAARWLYNKRKENSLWVKIILSGGRERIRIHGDIPANFKFYDDGADEKARILLVGRGENRQLSGFNGKEIAKKILRVLSSQEVKSHIDPRFSPSDQSADVISRISVVSSGIEQFGGEVPGTSSGTRFSLNYGFTYQLLTHLRDAHISISSGVSVRDAIIGVDAVGRKWTGNWDALSATILWHASQSAYKWIGVLNPGSQEVKFTKTWLEKDVLTQVRPWIDINKHGRFSLFSRYAFRDGIIPSKMRDTFSEEDFTLFTDKFDKSVGHRILMADVMVLFSGMKKKEWVGGKKVRTAIVDERADQLRILRDVLRQVTFNEHQEQWLAWLASSKLVSDKIHQKLRQLLTDHPRYYAQLRASADEDLFDFYYIDFAKKNAYYPIINHLGAESQSIKVIYLGDMEKRLHALIRKKELDLPAKTLSLGFFEENVLKLISDQTELLYSIHNTGKKAVSTETFQSDISEMATDLLLIRPRKNASPLAESYLASALIFENLTKEIALLGSSVPEGSLALLQKIIPIRGQNKSRVPFLDPRTGQVTHIDTNKRVFRQARDLLAKSYLIPLPDDGLMATSRGGYSIKMAADLSSWIFNKIFVARFLIEQIKAGKGLFAAPDTQSLSDGLGQALVLQHYVGILGMANDLADDLARLSYFTVSKVLNIQAVEFSLRRMAYFSSELLSGTTSTRRYAVLAKGILEKNQIKYALKKVTSGISKSAMGLGLIFSAADVALTTEAFLNAPDSDSQMILGTQLGFSVVGFGIQLGAIAAALAGAASLALALGVLALIIAVTAVLVILLLESFQKEASEVKACALFFKTLKESRQTGYVLKNGCFVHEGPACITKIELATHCKITFGSQKYQTYGSKFPGRFQAKFGKLNILREFNSAGVVLTALPAGSDTEEALSHNLVLPCIAQNSYDFSYTGSASETANYEFDAIFATVRALEQDHKDFVFFHRRMIPGVSQLGFFFHEMKAITTSRIPTNIKVSIAQNQWALHFPWIENREDYKREYNVFKKENPDLQVMEYQYFKEKVTEQEQLFRKEIISNASEITYHIENSSGTQQILVLPPTAFPLKLQLQGDNWLISALALGTIAPLRRERDQLYIGEHQVKATLTADQSLQVQYLIHPKATLIQRITASGMSIGSLTFDASDYPGSSIKTELSLLCQSQAKAYPDFAALPYLLLKNYQEDDYRGNAHYLVKNGMVLCTPVLAPFKSVTKHTHLLTIEAGKAFFYANIDLNATVVAEAKSDMADHSFQPTFWITHNGLSLLEFINYSFLPFFSSSTRLTIKTGIVQEQGQLMLIEHYKKGASSIEVQYVININSTTNQPLLLRKIQLSQNIFNTLTLDALFSGTLSSQVTLEQLRSLLCSILLGDDLSPSDLPRSNTQAAAGNIHTDE…
SIO_010081: CCS41_RS01725
subclass of: SO_0000673
so part of: CCS41_RS01725
location: complement(354884..362893)
location: region:354884-362893:-1
so has part: feature:354884-362893:-1:exon

WP_119797072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354884-362893:-1:exon

CCS41_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01730
old locus tag: CCS41_01730
pseudo: true
so part of: sequence
location: complement(363084..364155)
location: region:363084-364155:-1
so has part: feature:363084-364155:-1:exon
subclass of: SO_0000010

position:363084:-1
position: 363084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364155:-1
position: 364155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363084-364155:-1:exon

CCS41_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01730
old locus tag: CCS41_01730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012668363.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: CCS41_RS01730
subclass of: SO_0000673
so part of: CCS41_RS01730
location: complement(363084..364155)
location: region:363084-364155:-1
so has part: feature:363084-364155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363084-364155:-1:exon

CCS41_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01740
old locus tag: CCS41_01740
so part of: sequence
location: 364505..364903
location: region:364505-364903:1
so has part: feature:364505-364903:1:exon
subclass of: SO_0000010

position:364505:1
position: 364505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364903:1
position: 364903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364505-364903:1:exon

CCS41_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01740
old locus tag: CCS41_01740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016152705.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MKNPGQRIKNRRLELKITQKELASRVGVAHVTISQWERNDTSPRGDRLLSLSEALHCEASWVLRGDVVPNTPLSATSSARDLLTPKENVLLDLFSGLPASEQEQLIAMLKEKKRHYAQLLTELLHVRDKKKA
SIO_010081: CCS41_RS01740
subclass of: SO_0000673
so part of: CCS41_RS01740
location: 364505..364903
location: region:364505-364903:1
so has part: feature:364505-364903:1:exon

WP_119797074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364505-364903:1:exon

CCS41_RS15480
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15480
so part of: sequence
location: complement(365062..365238)
location: region:365062-365238:-1
so has part: feature:365062-365238:-1:exon
subclass of: SO_0000010

position:365062:-1
position: 365062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365238:-1
position: 365238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365062-365238:-1:exon

CCS41_RS15480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGTGYSARPVQISHLLVDSNDNDAIQSLLQIQNAATLATWKENTALHLSHSNNLLPLL
SIO_010081: CCS41_RS15480
subclass of: SO_0000673
so part of: CCS41_RS15480
location: complement(365062..365238)
location: region:365062-365238:-1
so has part: feature:365062-365238:-1:exon

WP_162859947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365062-365238:-1:exon

CCS41_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01745
old locus tag: CCS41_01745
so part of: sequence
location: complement(365318..365578)
location: region:365318-365578:-1
so has part: feature:365318-365578:-1:exon
subclass of: SO_0000010

position:365318:-1
position: 365318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365578:-1
position: 365578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365318-365578:-1:exon

CCS41_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01745
old locus tag: CCS41_01745
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKQDALLWWQKRGRDTSETWAIRVAPVTTAVVGSVPIEIQREQKKIIARHSDQRVYLSDKGIKPLETIRLAALTLQKLFTQPFYQ
SIO_010081: CCS41_RS01745
subclass of: SO_0000673
so part of: CCS41_RS01745
location: complement(365318..365578)
location: region:365318-365578:-1
so has part: feature:365318-365578:-1:exon

WP_119797075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365318-365578:-1:exon

CCS41_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01750
old locus tag: CCS41_01750
so part of: sequence
location: complement(365690..366160)
location: region:365690-366160:-1
so has part: feature:365690-366160:-1:exon
subclass of: SO_0000010

position:365690:-1
position: 365690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366160:-1
position: 366160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365690-366160:-1:exon

CCS41_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01750
old locus tag: CCS41_01750
inference: COORDINATES: protein motif:HMM:NF024751.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MACYKKQGKPVVYLDESGFAHDMPRTHGYAAQGQRCWGTQDWQPKGRTNVIGALLGTVLMAVGLFFCSINSDVFYAWVTQRLLPTLPPHCVIVMDNTSFHKRLDIQQAISKTGHRIEYLPPYSPALNPIEHKWAQAKSKRRDLNCSLDALFSQYSA
SIO_010081: CCS41_RS01750
subclass of: SO_0000673
so part of: CCS41_RS01750
location: complement(365690..366160)
location: region:365690-366160:-1
so has part: feature:365690-366160:-1:exon

WP_240313879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365690-366160:-1:exon

CCS41_RS17015
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS17015
so part of: sequence
location: complement(366147..366269)
location: region:366147-366269:-1
so has part: feature:366147-366269:-1:exon
subclass of: SO_0000010

position:366147:-1
position: 366147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366269:-1
position: 366269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366147-366269:-1:exon

CCS41_RS17015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS17015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHSVDFRRKVLGIREKENPASSQGRRRDTARLPGHDSLL
SIO_010081: CCS41_RS17015
subclass of: SO_0000673
so part of: CCS41_RS17015
location: complement(366147..366269)
location: region:366147-366269:-1
so has part: feature:366147-366269:-1:exon

WP_275887669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366147-366269:-1:exon

CCS41_RS17020
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS17020
so part of: sequence
location: complement(366315..366446)
location: region:366315-366446:-1
so has part: feature:366315-366446:-1:exon
subclass of: SO_0000010

position:366315:-1
position: 366315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366446:-1
position: 366446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366315-366446:-1:exon

CCS41_RS17020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS17020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLKPVVINTVKKLSTDMTAVEAEKWVGKIFRYRGDLEYSVTY
SIO_010081: CCS41_RS17020
subclass of: SO_0000673
so part of: CCS41_RS17020
location: complement(366315..366446)
location: region:366315-366446:-1
so has part: feature:366315-366446:-1:exon

WP_275887670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366315-366446:-1:exon

CCS41_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01755
old locus tag: CCS41_01755
so part of: sequence
location: complement(366714..366893)
location: region:366714-366893:-1
so has part: feature:366714-366893:-1:exon
subclass of: SO_0000010

position:366714:-1
position: 366714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366893:-1
position: 366893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366714-366893:-1:exon

CCS41_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01755
old locus tag: CCS41_01755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRRTARDYQDGQLTFAGVVFGLIELASFLLPCGLAAKQVSKLRCCPIKSSLLQGRSVP
SIO_010081: CCS41_RS01755
subclass of: SO_0000673
so part of: CCS41_RS01755
location: complement(366714..366893)
location: region:366714-366893:-1
so has part: feature:366714-366893:-1:exon

WP_119797077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366714-366893:-1:exon

CCS41_RS15485
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15485
so part of: sequence
location: complement(366899..367075)
location: region:366899-367075:-1
so has part: feature:366899-367075:-1:exon
subclass of: SO_0000010

position:366899:-1
position: 366899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367075:-1
position: 367075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366899-367075:-1:exon

CCS41_RS15485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15485
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSVDLRHGVAMAEMIQPGSSRTLSFDALCELATSDDFDWATDEQKETVIANIGTIIA
SIO_010081: CCS41_RS15485
subclass of: SO_0000673
so part of: CCS41_RS15485
location: complement(366899..367075)
location: region:366899-367075:-1
so has part: feature:366899-367075:-1:exon

WP_162859948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366899-367075:-1:exon

CCS41_RS15890
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15890
old locus tag: CCS41_01760
so part of: sequence
location: 367208..367714
location: region:367208-367714:1
so has part: feature:367208-367714:1:exon
subclass of: SO_0000010

position:367208:1
position: 367208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367714:1
position: 367714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367208-367714:1:exon

CCS41_RS15890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15890
old locus tag: CCS41_01760
inference: COORDINATES: protein motif:HMM:NF024935.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSDYPCTKDLYKAFLQASSVRYSGLALSEVSPSRVSHDSVSRWLKSRCFRPKELWQLVAPSIDREAPCFLIADDRVLAKKRSKKIERVHYHYSGNEHDVIAGIGLVNLLWQGLEKGESVPIDYRIDDKETDGKTKNSHFCDMLKLAKARGIAPEAVVMDAWYSVFKFR
SIO_010081: CCS41_RS15890
subclass of: SO_0000673
so part of: CCS41_RS15890
location: 367208..367714
location: region:367208-367714:1
so has part: feature:367208-367714:1:exon

WP_205411449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367208-367714:1:exon

CCS41_RS15895
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15895
old locus tag: CCS41_01765
so part of: sequence
location: 367683..368015
location: region:367683-368015:1
so has part: feature:367683-368015:1:exon
subclass of: SO_0000010

position:367683:1
position: 367683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368015:1
position: 368015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367683-368015:1:exon

CCS41_RS15895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15895
old locus tag: CCS41_01765
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRGIRYSSLDNLNAIRSPGWIGVTTLRKNRIVNRNVTLASLDIPEEGLSVHLRGDGWVTVFKFVTKHGRIDYVATNKENPTREQMKAVTEARWSVEVYHREIKQTCGIYP
SIO_010081: CCS41_RS15895
subclass of: SO_0000673
so part of: CCS41_RS15895
location: 367683..368015
location: region:367683-368015:1
so has part: feature:367683-368015:1:exon

WP_205411409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367683-368015:1:exon

CCS41_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01765
old locus tag: CCS41_01770
so part of: sequence
location: 368065..369087
location: region:368065-369087:1
so has part: feature:368065-369087:1:exon
subclass of: SO_0000010

position:368065:1
position: 368065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369087:1
position: 369087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368065-369087:1:exon

CCS41_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01765
old locus tag: CCS41_01770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MKIELTADQKITLEAQHRQSHDRRVCDRIRCVLLSADGWTPPMIAHSQLINETTVRRHLTDYHKLNKLKPENGGSDGYLNAEQTTSLVEHLTQQLYHHNHQIVAYIAGRWNITFTVSGLYKGLKQHGFSYKKPKGVPHKFAVEKQPQFIKTYSELKDAAGNDPILFIDAVHPTQATKISYGWIRKGQDKTIETTGSRTRLNIMGALNIQNVANPIIRDDETINSENVVHFLSAIRAHYPITTTAHVILEGAGYHRSQLVQDAALTLNIQLHYLPPYSPNLNPIERLWKVMNEQTRNNRYYPSKQSFKNDILNFFEVKLPQMASSLVSRLNDNFQALNPAS
SIO_010081: CCS41_RS01765
subclass of: SO_0000673
so part of: CCS41_RS01765
location: 368065..369087
location: region:368065-369087:1
so has part: feature:368065-369087:1:exon

WP_119797078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368065-369087:1:exon

CCS41_RS17025
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS17025
old locus tag: CCS41_01775
so part of: sequence
location: 369157..369285
location: region:369157-369285:1
so has part: feature:369157-369285:1:exon
subclass of: SO_0000010

position:369157:1
position: 369157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369285:1
position: 369285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369157-369285:1:exon

CCS41_RS17025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS17025
old locus tag: CCS41_01775
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAWFEQHKRRLSEKITLYQQNWAVIKNAITTHIRVLLAAPG
SIO_010081: CCS41_RS17025
subclass of: SO_0000673
so part of: CCS41_RS17025
location: 369157..369285
location: region:369157-369285:1
so has part: feature:369157-369285:1:exon

WP_275887671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369157-369285:1:exon

CCS41_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01775
old locus tag: CCS41_01780
so part of: sequence
location: complement(370123..370524)
location: region:370123-370524:-1
so has part: feature:370123-370524:-1:exon
subclass of: SO_0000010

position:370123:-1
position: 370123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370524:-1
position: 370524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370123-370524:-1:exon

CCS41_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01775
old locus tag: CCS41_01780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016152705.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MESSGQRIKSRRLKLKLTQKELAKRVGVAHVTISQWERGDTSPRGDRLFSLAEALDCEASWVLRGDSSLAETPTAEVTREKEQLTSKETILLDLFSGLPESEQEQLIKTLEEKKEHYARLLTELLNARDRKKA
SIO_010081: CCS41_RS01775
subclass of: SO_0000673
so part of: CCS41_RS01775
location: complement(370123..370524)
location: region:370123-370524:-1
so has part: feature:370123-370524:-1:exon

WP_119797079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370123-370524:-1:exon

CCS41_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01780
old locus tag: CCS41_01785
so part of: sequence
location: 370759..373749
location: region:370759-373749:1
so has part: feature:370759-373749:1:exon
subclass of: SO_0000010

position:370759:1
position: 370759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373749:1
position: 373749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370759-373749:1:exon

CCS41_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01780
old locus tag: CCS41_01785
inference: COORDINATES: protein motif:HMM:NF024321.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcdA/TcdB catalytic glycosyltransferase domain-containing protein
translation: MTESDLATKISLFFIQNHSLLKTTTEEKLVTALVDYLASSAERFTKPVPRMENPKKEMEKLSGLLYLLEKSKYSNFYQRNLVRSITRRIATISVPVPEEMHFMSLVKLEAVQLDYINLWAQQNASNYKINIWMDSGTLLAGELAERLQEVAIKHSLNAEYRSNEAFKTHLMEWQSRAYKSIVAKMSLIDSSKKGNQKFSFDQAVSFFLEDNGLAKPGELEKIRRANAESFHISVEKLKKSIPHRDRKNINLIDFYSMRDQPHYLLYIRELASRGNLLAATDISRLMLLQEHGGLYLDTDVLPTFNKWLFSLVTKFDSAGTTDTRNHEVIMRVILDELTERGKMPGRAAVIASENHGGYLDPLQDRSPHEIRRIRKWVQLVLDRGDSPFLPLNKLTVDPLFQYSYANGNNKAVVAKKDSFFINELLTNLQQIHEVMDKHHVGELDYPIPQETLNTMTTELKAKGLLIHADTLFCYRSEGAITASIPGTDQVAGVSTYHHAYSSLLHNQDIASDSKRSLSRKIFFPFKRAFFLTEEAHRSRLREPGMKSPHYVSHHKSNYDSQYIIQLQDDASVNQMARFLYNKNGDRTAHYCYTQQHQRLVKVNAKPNFAFNGKTRIILIGHGSFMRTMGEEKIVQLLVDANLLAKDTSGAFIAVDRVSLVACNLTESTPIEANRPVQQLTVEQPSEGFVERLYRTFSAKKIKVNSISARDNLVTVDVLGRKWTGVPLNPNAPQNQWYIQWTLVKESSKKLIFTQQDDGKIVSERILETKDIAARTRKIHSSYSGRFGVDYMIKVPDGQKVRLSGKVDEKTVLRLMDNMKKGQVLMAPDCMALVAGMCEGQGIIVNGSERAMSAWQKALQLTKDHDDYLSWLAALDLSSGTTELTFCMEELFPDPEEAFMRLKERYLHDEFDLFCLDLSDPQSAGIIDRDIRKKGAVRGIDLGSVEELLLNTTREVLKLEDELSVHQSKIQRALEIIEGNLLHLSGGEVIPRYIIVP
SIO_010081: CCS41_RS01780
subclass of: SO_0000673
so part of: CCS41_RS01780
location: 370759..373749
location: region:370759-373749:1
so has part: feature:370759-373749:1:exon

WP_119797080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370759-373749:1:exon

CCS41_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01785
old locus tag: CCS41_01790
so part of: sequence
location: 373746..378434
location: region:373746-378434:1
so has part: feature:373746-378434:1:exon
subclass of: SO_0000010

position:373746:1
position: 373746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378434:1
position: 378434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373746-378434:1:exon

CCS41_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01785
old locus tag: CCS41_01790
inference: COORDINATES: protein motif:HMM:NF024322.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcdA/TcdB pore-forming domain-containing protein
translation: MIIKKSEAATVGVSKLRRKYADKDYLTRLRALSNKPAFRTLFGDPIMLSESLSQANQALLAENHLPAEQWSPLLSATRHDKGYGKYVVPYLHNDGIQEKELLTSSDEFAKMKVFLDQQQEILADYYHLTSNARLIQNKFFSKTEIIGMGVNTVFAIMAIQHWLRNGVTLPSDTPLANILQVHTYVAMTQVGFNATSDSVSSLASLQNAFLRRQILQNRAAFTALKKMGLNSTTLSAPASGSTVLSNVVLNKTGFTAFSRLFQLIALPVGLGLGIADVVLSTIELSKAESEGQRTLAITQLSFSAAGLSLFIGSVIAGLLGLALLVTGLFIVGIALAVAGFFIQQTVVDSLNEAEKVRFIIDYFKNMFTGWEKGGFTLQRGVFVPCQGVVVKQLDLRNPDYISVIFNEEGQQLRNNKEIFSDQPYLNLYRLRDTHKTVTTCAKNNNVADITTLILPNQPRAKINTLSECRILEKQKPEKLPLLPHTDPVDRGIYYLMPSELRLNYLLTNVEILLGNNQYHLIAPGIDPTQPVHSFINQPVYAKDLHYWLRAPEQGPATAVLVLNRAQANMTIICANKQVDWIIDASHLDAIEMKNNAGAGRSRTLKFVRRILKTEGEYSTEVITTITLGNSEKTQISVRLPQGTIKKLDNQQSIFYRVNVADLNVDLSHPATYGERVKTALPHYLQQQNRLNNHAVNYIHLDDYLHHDNQGNAEKIVGCFYPMRQERSTLLYTANHDDTPFNSEIARSHVELIFHNENFAWYRGDITLTLERSRERAGSRGQLIRPVPPTVIESSTYENVFWMSNNRTKKLCKLYLPAIHLPVVNHTTSMVGRPPAALSEITQTQVFAKGILFQHRYTYHTGEMSSGYVSQQIHLICMIDTSSAEGSMTLLEARDLPRNLMTTLSHSDSLEDLHRFMKEKTVNSSAGARFSSLHPGHSSIVKLGLPQTNTTVSIGNRLIWPLPESLHGVTGRIDAKIDSAILYDTRYLTTLAGIVKGDSEDQHHYFWSVTEPDNQQQFYKLYLQKGQSGAREIELTDFGLINTQITNITDCHQGVLISMKQGQGYYLSVDEQLCLQRISKTWHSGDSHWLLSLTAYVGELQAQQGTSFSSESGQKKPIKVAPLLTITDLRTSDDGHVLPAWYDSIGKQLLICNQAPSLVADWSCLGMANDQQGAWMVKNSNDSDGVEIGYLPAIDIIELFTYHDLLTTAKIPAAEIPALVPLPANTLLNGDHFTGVSPAGGGHLNGVTQNGIMLDISRRDINNEADRLKNRFITTLLGVTHAFSDPYHFASGDIQETGMAHRLSTLCAHYISENNAPEVIAIPLKRDKRGWYHPKSSRLFVLHYHEGKGNLYLSHQYLGFNSREQFAYFTGNSPGFTLQVSSTGTQKIVDNQEGAIYKRLDEHMTLNVDIADNPHYLNIDNVEKLLIMTTSEQKNDRECTVDLQSFSYKEIQLLHRGAGSLHCRCRCSRRHVVILRMGMDLRLLIADKTDTEKVDKMVTIKAVFDPQENSAYSRLQLSFDEGQITANVLASYHTSNTTAESDQSTEETDIFLPVSIVGLSLNT
SIO_010081: CCS41_RS01785
subclass of: SO_0000673
so part of: CCS41_RS01785
location: 373746..378434
location: region:373746-378434:1
so has part: feature:373746-378434:1:exon

WP_119797081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373746-378434:1:exon

CCS41_RS15490
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15490
so part of: sequence
location: complement(379176..379272)
location: region:379176-379272:-1
so has part: feature:379176-379272:-1:exon
subclass of: SO_0000663

position:379176:-1
position: 379176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379272:-1
position: 379272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379176-379272:-1:exon

CCS41_RS15490
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS15490
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(379194..379196),aa:Ser,seq:cga)
SIO_010081: CCS41_RS15490
subclass of: SO_0000673
so part of: CCS41_RS15490
location: complement(379176..379272)
location: region:379176-379272:-1
so has part: feature:379176-379272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379176-379272:-1:exon

CCS41_RS15900
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15900
so part of: sequence
location: complement(379507..379674)
location: region:379507-379674:-1
so has part: feature:379507-379674:-1:exon
subclass of: SO_0000010

position:379507:-1
position: 379507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379674:-1
position: 379674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379507-379674:-1:exon

CCS41_RS15900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIRPSHHRIIASSHHRDIKSYWKKPPVGIIDVKVSLSILPTPEDTVLEVNLKSL
SIO_010081: CCS41_RS15900
subclass of: SO_0000673
so part of: CCS41_RS15900
location: complement(379507..379674)
location: region:379507-379674:-1
so has part: feature:379507-379674:-1:exon

WP_205411450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379507-379674:-1:exon

CCS41_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01795
old locus tag: CCS41_01800
so part of: sequence
location: 380067..380903
location: region:380067-380903:1
so has part: feature:380067-380903:1:exon
subclass of: SO_0000010

position:380067:1
position: 380067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380903:1
position: 380903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380067-380903:1:exon

CCS41_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01795
old locus tag: CCS41_01800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPITDNNFSLARKETNKVLSNQHHTSKSTLQRIVEVSQSVEELTKNLIQKVKENPQQDISITEYQENSHYLDKETIASLKKLAERYNGFYKMAFCQADFTSRSLKNLELATRGVCSPLVETWLGMRDPLLQNNFFNFIKTEDGAKKIAQLNIKTLITFTKNETQDEYELRYFSEDNRKLIELIKYFGENDSDIIKLAKENVFIKNKESIRELVSIFNKNHKEFVEFVKIIAQDDSFINKLVNKHNIINDEKITESLVQYYSLHKSEIHDLVLEAYLTK
SIO_010081: CCS41_RS01795
subclass of: SO_0000673
so part of: CCS41_RS01795
location: 380067..380903
location: region:380067-380903:1
so has part: feature:380067-380903:1:exon

WP_119797083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380067-380903:1:exon

CCS41_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01805
old locus tag: CCS41_01810
pseudo: true
so part of: sequence
location: complement(381533..382356)
location: region:381533-382356:-1
so has part: feature:381533-382356:-1:exon
subclass of: SO_0000010

position:381533:-1
position: 381533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382356:-1
position: 382356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381533-382356:-1:exon

CCS41_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01805
old locus tag: CCS41_01810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041621276.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: CCS41_RS01805
subclass of: SO_0000673
so part of: CCS41_RS01805
location: complement(381533..382356)
location: region:381533-382356:-1
so has part: feature:381533-382356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381533-382356:-1:exon

CCS41_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01810
old locus tag: CCS41_01815
so part of: sequence
location: complement(382593..383075)
location: region:382593-383075:-1
so has part: feature:382593-383075:-1:exon
subclass of: SO_0000010

position:382593:-1
position: 382593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383075:-1
position: 383075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382593-383075:-1:exon

CCS41_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01810
old locus tag: CCS41_01815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRAYNLPFSLLTAKPKISSEQASSSGYSTKQTVLEKRSLQNTSKIPNVANIPQETAHLAMSQEKAPSQLEKGSSEFPYMVDHAAAAEFYIKNGHRSHKCFHEQHGVGCNGQAKDVKKSESSSPQIENRQNSGRNVYPWPKGNTSGIKPASHAVPPGQYA
SIO_010081: CCS41_RS01810
subclass of: SO_0000673
so part of: CCS41_RS01810
location: complement(382593..383075)
location: region:382593-383075:-1
so has part: feature:382593-383075:-1:exon

WP_162859950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382593-383075:-1:exon

CCS41_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01815
old locus tag: CCS41_01820
so part of: sequence
location: complement(383240..383653)
location: region:383240-383653:-1
so has part: feature:383240-383653:-1:exon
subclass of: SO_0000010

position:383240:-1
position: 383240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383653:-1
position: 383653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383240-383653:-1:exon

CCS41_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01815
old locus tag: CCS41_01820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706431.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system chaperone
translation: MNPESRLDYLKDVLQLPSLVFDEEGCCIVTFDGIPINFQTIDDRLVMTIYIAELPENTEADFFAKLLAANLYWKSTQGCTLAFDPESRSLVAQVIDDENKDIKKVLESLLEVTEGWRTYMDNPPIPHKRQDIRGIRL
SIO_010081: CCS41_RS01815
subclass of: SO_0000673
so part of: CCS41_RS01815
location: complement(383240..383653)
location: region:383240-383653:-1
so has part: feature:383240-383653:-1:exon

WP_119797086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383240-383653:-1:exon

CCS41_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01820
old locus tag: CCS41_01825
so part of: sequence
location: complement(383807..384460)
location: region:383807-384460:-1
so has part: feature:383807-384460:-1:exon
subclass of: SO_0000010

position:383807:-1
position: 383807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384460:-1
position: 384460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383807-384460:-1:exon

CCS41_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01820
old locus tag: CCS41_01825
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAPVSSEVTHPQSHQDTPKFQSSRISLRKGSTDRSFSLLDFAREKKWRHAFGHNGVANLLSVSRTAHRDTAQVSSNIIRQAPTFHRSPATIYVLLENQRKSLKTLAIQPFKMEEELSHSEYASCRALVGSQAQALLPLLSTSERGSQQVGTEEKKVVIFKAKNETASMPLSTKHCTREEEAPPGCVTNNPKRSYPPVSRQGVDNHADFTHLRHYNR
SIO_010081: CCS41_RS01820
subclass of: SO_0000673
so part of: CCS41_RS01820
location: complement(383807..384460)
location: region:383807-384460:-1
so has part: feature:383807-384460:-1:exon

WP_119797087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383807-384460:-1:exon

CCS41_RS15495
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15495
so part of: sequence
location: complement(384854..385027)
location: region:384854-385027:-1
so has part: feature:384854-385027:-1:exon
subclass of: SO_0000010

position:384854:-1
position: 384854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385027:-1
position: 385027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384854-385027:-1:exon

CCS41_RS15495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15495
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERQGMDSRRKKLATTAGQLRNVFIITTHKLTLINYSINKQPFTDIQHMEFMTMCVA
SIO_010081: CCS41_RS15495
subclass of: SO_0000673
so part of: CCS41_RS15495
location: complement(384854..385027)
location: region:384854-385027:-1
so has part: feature:384854-385027:-1:exon

WP_162859951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384854-385027:-1:exon

CCS41_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01825
old locus tag: CCS41_01830
so part of: sequence
location: 385139..385600
location: region:385139-385600:1
so has part: feature:385139-385600:1:exon
subclass of: SO_0000010

position:385139:1
position: 385139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385600:1
position: 385600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385139-385600:1:exon

CCS41_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01825
old locus tag: CCS41_01830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLKKMSYLAIVLFALTNTAFATTSEELAQQRQEVVKKYVNGLGAAKYQEIATIFTKESVVFSTGKGKFNAQEFFKDFLPKVRSASTKFKQYFINTEDTDRVAARFYLAFTLKEGDGERHEGEYMDEFVFEKNSDKLLAVYMFENLKAYNQLK
SIO_010081: CCS41_RS01825
subclass of: SO_0000673
so part of: CCS41_RS01825
location: 385139..385600
location: region:385139-385600:1
so has part: feature:385139-385600:1:exon

WP_119797088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385139-385600:1:exon

CCS41_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01830
old locus tag: CCS41_01835
so part of: sequence
location: complement(386018..389989)
location: region:386018-389989:-1
so has part: feature:386018-389989:-1:exon
subclass of: SO_0000010

position:386018:-1
position: 386018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389989:-1
position: 389989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386018-389989:-1:exon

CCS41_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01830
old locus tag: CCS41_01835
inference: COORDINATES: protein motif:HMM:NF024939.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1983 domain-containing protein
translation: MVITGNKGGSQRPPTPTESPDSLHSTAKAKILLALGEGEFAGELDGTRIYLDGTPLNNADGSANFTGVTWDYRPGTPSQDYITGMPNVENEVTVNTELKADTPWVRAISNTQLSALRIRFSWPALQRQTDNGDVNGTRVEYEIEMATDGGAYHTVLKTTVEGKTSTGYQRSHRINLPDAKTGWQLRVRRLTPNSTSNRLADNMHIEALAEIIDAKLRYPNTALLYIEFDASQFQHIPVIACEPKMRTIRVPTTYDPATRTYKGTWDGTFKWAYSNNPAWVFYDILLADRFGLGHRLTAAQVDKWELYRIAQYCDQFVPDGKGGNGTEPRFLCDVYIQSQAEAFTVLRDLAAIFRGMTYWANNQLCALADMPRDRDYLYTRANVIDGRFSYSSSSEKSRYSTAMVSWSDPANSYQGTLEAVSDEALVRRYGINQLSTTAIGCVRQTEAHRRGRWALLTNAKDRLVTFDVGLDGAIPLPGHIIAVADEMLSGRKSGGRLRHAVGCDITLERPADVKPGDRLLVNLPSGTAQARTVHAVNGQLITVSVAYSETPQPEAIWSVEADDVALQHYRVTRIEDNNDNTYRINAVQHDPDKYERIDSGTRLDERPISVIPLTLQPPPTHITLTSHAVIAQGLAVTTLQVNWQAASGATAYDAQWRRDKGNWTPLLRVLTCGFEVPNSYAGCYQARVRAINATGSTSLWVTTPEIPLQGKENPPPQPVGLTTTPIVFGITLNWAFPAGAEDTLKTEVECSRFAHDAHQKPLIDIAYPQRHYTMQGLAAGRTFYFRARLVDRLGNQGAWTPWVQGASSDDAEMVLDHIRDDIMTTQAGKRLTSQLDTLIKTSQANERKQEHSRITLQKEVKDRVEETLLQVNERLERQDKTLQRYNQGLKSRFKISQLQTQDVQKTATHLDTAFITYKEEMDTQFDRANADVLAVRQAQSDTHQAFSLYRLDMTARFDKNDALITDIHTAHATATQALADYQNRIAARFGKNETAISQTQRAQTLATQALAEYQNMITARFRDNDAVIETKATTQFTSSGGNALYSIKAGIHHQGKYYDAGMVVGVETQGGSVKSQIGFNADNFILLSGQNGKKFSPFAVKNNQVFIREGFIQDATIDTAKIKEAAITNTKIGGPLQSTNWAAGRSGWKIEKAGHAEFNDATFRGTIYATDGWFKGTVSADKIEGDILDMSPNFFKTKKGSIPDSQSVIFPLFYIKKTASPRRVLLLGRKEKGIALSVSPDWVRATITRDGMDVQYLGKAGSGLLGEYVNAVNEDIDITLPAGEGEVLIGLRLQSTRGKLRMFNWTASGDIYTMKNAASIKIA
SIO_010081: CCS41_RS01830
subclass of: SO_0000673
so part of: CCS41_RS01830
location: complement(386018..389989)
location: region:386018-389989:-1
so has part: feature:386018-389989:-1:exon

WP_119797089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386018-389989:-1:exon

CCS41_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01835
old locus tag: CCS41_01840
so part of: sequence
location: complement(390051..390629)
location: region:390051-390629:-1
so has part: feature:390051-390629:-1:exon
subclass of: SO_0000010

position:390051:-1
position: 390051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390629:-1
position: 390629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390051-390629:-1:exon

CCS41_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01835
old locus tag: CCS41_01840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019455902.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tail assembly protein
translation: MAALHQTLRTIRLYGKLGHLFGRVHQLAVETPREAIKALSVILPGFEQFMLRSQAQGLTFAVFNGQHNISREELASAHGSQDIRIAPVIIGSKRGGVFQTIIGAMLVAASFIPGAQFLAPVGISMMVGGVIQMLSPQQSGLSRREDPDNKPSYAFGGPVNSTAQGNPVPIGYGKRRIGGAVISAGIYAEDQM
SIO_010081: CCS41_RS01835
subclass of: SO_0000673
so part of: CCS41_RS01835
location: complement(390051..390629)
location: region:390051-390629:-1
so has part: feature:390051-390629:-1:exon

WP_072551150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390051-390629:-1:exon

CCS41_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01840
old locus tag: CCS41_01845
so part of: sequence
location: complement(390816..391253)
location: region:390816-391253:-1
so has part: feature:390816-391253:-1:exon
subclass of: SO_0000010

position:390816:-1
position: 390816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391253:-1
position: 391253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390816-391253:-1:exon

CCS41_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01840
old locus tag: CCS41_01845
inference: COORDINATES: protein motif:HMM:NF023996.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3757 domain-containing protein
translation: MKVSHALFMIVSYMSVTSSWAIDGSCPPSSQITKQCNDKECTYTATYPPEGLGWTSARQRKENLDNSRPELNFKEAIILIDKKVAPFVCVYSSAGYDNKDLRLLVSSPVKSTVNKDSNHWKENKQLNRWSCVDSDPASCVFEYSQ
SIO_010081: CCS41_RS01840
subclass of: SO_0000673
so part of: CCS41_RS01840
location: complement(390816..391253)
location: region:390816-391253:-1
so has part: feature:390816-391253:-1:exon

WP_072551151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390816-391253:-1:exon

CCS41_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01845
old locus tag: CCS41_01850
so part of: sequence
location: complement(391867..392076)
location: region:391867-392076:-1
so has part: feature:391867-392076:-1:exon
subclass of: SO_0000010

position:391867:-1
position: 391867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392076:-1
position: 392076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391867-392076:-1:exon

CCS41_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01845
old locus tag: CCS41_01850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011091543.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold shock domain-containing protein
translation: MIFMKGSVKWFDEKKGFGFITPGDGSHDALVCSADIVTDGFKILNEGQIVEYDVEEGAKGPVAKNVRST
SIO_010081: CCS41_RS01845
subclass of: SO_0000673
so part of: CCS41_RS01845
location: complement(391867..392076)
location: region:391867-392076:-1
so has part: feature:391867-392076:-1:exon

WP_240313794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391867-392076:-1:exon

CCS41_RS15500
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15500
so part of: sequence
location: complement(392365..392505)
location: region:392365-392505:-1
so has part: feature:392365-392505:-1:exon
subclass of: SO_0000010

position:392365:-1
position: 392365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392505:-1
position: 392505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392365-392505:-1:exon

CCS41_RS15500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRCTVNKDKLKNDCIHRAIEAVNISPSIEKRHINWIVSSLSDVIQ
SIO_010081: CCS41_RS15500
subclass of: SO_0000673
so part of: CCS41_RS15500
location: complement(392365..392505)
location: region:392365-392505:-1
so has part: feature:392365-392505:-1:exon

WP_162859953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392365-392505:-1:exon

CCS41_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01850
old locus tag: CCS41_01855
so part of: sequence
location: complement(392502..393209)
location: region:392502-393209:-1
so has part: feature:392502-393209:-1:exon
subclass of: SO_0000010

position:392502:-1
position: 392502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393209:-1
position: 393209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392502-393209:-1:exon

CCS41_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01850
old locus tag: CCS41_01855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004935819.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C40 family peptidase
translation: MRKRTLQAMLAHAAAAYPFECCGVIAQQSRQERYFPCNNLAAKPTEQFHLDPQGYMDAENWGTVTAIVHSHPDATSQPSELDRAQCDHTQLPWYIVSWPEGDVRTIQPRGELPLVGREFVLGHTDCWGLILSYFRQTHGIELNDYRVAYPWWESGKENYYLDNWYACGFREFSGEYQPGDVVMMQVSAPVANHAGILLADGMLLHHLYGKPSQRVPYGGYWQERTVKMVRHKRLL
SIO_010081: CCS41_RS01850
subclass of: SO_0000673
so part of: CCS41_RS01850
location: complement(392502..393209)
location: region:392502-393209:-1
so has part: feature:392502-393209:-1:exon

WP_072551153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392502-393209:-1:exon

CCS41_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01855
old locus tag: CCS41_01860
so part of: sequence
location: complement(393212..393964)
location: region:393212-393964:-1
so has part: feature:393212-393964:-1:exon
subclass of: SO_0000010

position:393212:-1
position: 393212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393964:-1
position: 393964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393212-393964:-1:exon

CCS41_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01855
old locus tag: CCS41_01860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211709.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage minor tail protein L
translation: MAIHTDLQRLLPGNRIRLFEVDGTQFNADILRFHADTLAHTPEELTTAAADETKLNAKSIWWQGKEYAPWPVQIEGLETASDGQQAQPRLTVANLDGSITALCLKFDDMVQAKVIINDTFKHYLDARNFLEGNPEADPTQEKVQVYTIDSKSMETSEMVEFTLSSPADLQGLLIPTRQIHSLCTWAMRGDYRSGSGCDYAGSQYFDEQGNPTDDLTKDRCTGRLVECKKRFGKHNPLPFGGFPGSALIKR
SIO_010081: CCS41_RS01855
subclass of: SO_0000673
so part of: CCS41_RS01855
location: complement(393212..393964)
location: region:393212-393964:-1
so has part: feature:393212-393964:-1:exon

WP_072551154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393212-393964:-1:exon

CCS41_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01860
old locus tag: CCS41_01865
so part of: sequence
location: complement(393980..394321)
location: region:393980-394321:-1
so has part: feature:393980-394321:-1:exon
subclass of: SO_0000010

position:393980:-1
position: 393980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394321:-1
position: 394321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393980-394321:-1:exon

CCS41_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01860
old locus tag: CCS41_01865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MAIDTFTWRTQGTPEGSFLHRVRVAQFGDGYKQVAGDGINPESQSWPLTFQGTETDMLPLLTFVRQHCIQPCLWTPPYGVLGLYRVATDSIRVTPLGGNILSISFIFEQAFQP
SIO_010081: CCS41_RS01860
subclass of: SO_0000673
so part of: CCS41_RS01860
location: complement(393980..394321)
location: region:393980-394321:-1
so has part: feature:393980-394321:-1:exon

WP_072551155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393980-394321:-1:exon

CCS41_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01865
old locus tag: CCS41_01870
so part of: sequence
location: complement(394343..394564)
location: region:394343-394564:-1
so has part: feature:394343-394564:-1:exon
subclass of: SO_0000010

position:394343:-1
position: 394343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394564:-1
position: 394564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394343-394564:-1:exon

CCS41_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01865
old locus tag: CCS41_01870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPPSLGRQGKATAVAINVGDINILNQGMGQQSSPSTQDSAALRKQIKTAITTTISEQLSKPGTPLWMAMHGRG
SIO_010081: CCS41_RS01865
subclass of: SO_0000673
so part of: CCS41_RS01865
location: complement(394343..394564)
location: region:394343-394564:-1
so has part: feature:394343-394564:-1:exon

WP_119797090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394343-394564:-1:exon

CCS41_RS16240
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16240
so part of: sequence
location: complement(394836..395087)
location: region:394836-395087:-1
so has part: feature:394836-395087:-1:exon
subclass of: SO_0000010

position:394836:-1
position: 394836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395087:-1
position: 395087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394836-395087:-1:exon

CCS41_RS16240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705970.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MTYPLKFRQHVLAIKKQEKLTYAETASCFCVGIARLMRWAKRIDPCLTRDKPATKINRAALLLDVETYPYILIINFQRLMIPN
SIO_010081: CCS41_RS16240
subclass of: SO_0000673
so part of: CCS41_RS16240
location: complement(394836..395087)
location: region:394836-395087:-1
so has part: feature:394836-395087:-1:exon

WP_240313795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394836-395087:-1:exon

CCS41_RS17030
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS17030
so part of: sequence
location: 395228..395485
location: region:395228-395485:1
so has part: feature:395228-395485:1:exon
subclass of: SO_0000010

position:395228:1
position: 395228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395485:1
position: 395485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395228-395485:1:exon

CCS41_RS17030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS17030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFPTKGFSLSPFVLNRVEVRRIRREIFQNKTRFLYSRLDILAFVKAHIIHHDNSPLRDFWQSVLGYPRMKNIAIDIVFKGTNGG
SIO_010081: CCS41_RS17030
subclass of: SO_0000673
so part of: CCS41_RS17030
location: 395228..395485
location: region:395228-395485:1
so has part: feature:395228-395485:1:exon

WP_275887650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395228-395485:1:exon

CCS41_RS16250
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16250
so part of: sequence
location: complement(395646..395873)
location: region:395646-395873:-1
so has part: feature:395646-395873:-1:exon
subclass of: SO_0000010

position:395646:-1
position: 395646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395873:-1
position: 395873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395646-395873:-1:exon

CCS41_RS16250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16250
inference: COORDINATES: protein motif:HMM:NF013842.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MINPPVNKIARAALILDVETYPDASQYERAQRMGVSARGICHALKRAGFSYKKNILSSKSQRPIPRRFSDQDPGL
SIO_010081: CCS41_RS16250
subclass of: SO_0000673
so part of: CCS41_RS16250
location: complement(395646..395873)
location: region:395646-395873:-1
so has part: feature:395646-395873:-1:exon

WP_240313796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395646-395873:-1:exon

CCS41_RS16255
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16255
so part of: sequence
location: complement(395851..396018)
location: region:395851-396018:-1
so has part: feature:395851-396018:-1:exon
subclass of: SO_0000010

position:395851:-1
position: 395851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396018:-1
position: 396018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395851-396018:-1:exon

CCS41_RS16255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transposase
translation: MTYPLKFRQHVLAIKEQEKLTYAQTATRFCIGTASLMRWAKRIEPCLTRDKPASK
SIO_010081: CCS41_RS16255
subclass of: SO_0000673
so part of: CCS41_RS16255
location: complement(395851..396018)
location: region:395851-396018:-1
so has part: feature:395851-396018:-1:exon

WP_240313797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395851-396018:-1:exon

CCS41_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01885
old locus tag: CCS41_01890
so part of: sequence
location: 396020..397423
location: region:396020-397423:1
so has part: feature:396020-397423:1:exon
subclass of: SO_0000010

position:396020:1
position: 396020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397423:1
position: 397423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396020-397423:1:exon

CCS41_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01885
old locus tag: CCS41_01890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001469190.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4055 domain-containing protein
translation: MKLYINLYSLRYIATPHLDYNSLLAAWDINDALMGGTLCLRQQGETYLPRWTNEDKHSYQQRLSVATLLPAYEETLKNNLGRVFSEPTQLSESTPAVMVEYCQDMDLLGNRLDVWAQAYFSLALQYGVAHALVDYPRVETLKTRAEEKARGARPYAVLINPRQVIGWQSSHQGGPVQLTELRIREEIVVETAPYRQQKIAQIRKLTPGRVELYRKIRQADGTDRWALHDSWATSCPRIPLVTLYSKRTGFMCGAPPLLNLALLNIKHWQSQSEQDNILHVARVPILNVFGLEAGEKLTIGASSATHFTDRTKQGSAYTEHSGAAVGAGKEALTDLVEQMRQAGGKLLRSQNSSTKTLDQVSEERLQEQSPLYTLSNSLEDALDTLLQLMADWSGEKDGGKVNIRTELETTQQAFNAPAALAIQALRQGGDIRQVDAIRALQALNLIDADANPETLCDELNNLPPDLL
SIO_010081: CCS41_RS01885
subclass of: SO_0000673
so part of: CCS41_RS01885
location: 396020..397423
location: region:396020-397423:1
so has part: feature:396020-397423:1:exon

WP_240313798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396020-397423:1:exon

CCS41_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01890
old locus tag: CCS41_01895
so part of: sequence
location: 397518..398612
location: region:397518-398612:1
so has part: feature:397518-398612:1:exon
subclass of: SO_0000010

position:397518:1
position: 397518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398612:1
position: 398612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397518-398612:1:exon

CCS41_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01890
old locus tag: CCS41_01895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017693496.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTVNQRLRDEALAHSLFQSRYAHGVAKEKVAILNQYDAELTARLFGKLEKVNPQHIEVKQLARLLACVQEVNQQAMSTLYLSLSEELLAFAEHEAGYHCRLVDKLLPDVVLHRYPLAIITAEQVYAAAMAQPFQGRLLRDWVSHLESDRFQRINNAVKNGFLLGDTIEQITRKVRGSRAKQYQDGVLDISRKNLTSVVKTAVNHVSAVARDKFAENNAAMIDRKQWLSTLDNKTSSPCVIRDRLCYTLAGQPLGHKIPYLQGPGRLHFCCRSTETLVIKSWRALGIDLDELDPGTRASLDGQVPADTTYADWLQQQPYARQVQVLGKTRAKMLREEGRRPDDFFSDKGEWLTLEQLRETLHIE
SIO_010081: CCS41_RS01890
subclass of: SO_0000673
so part of: CCS41_RS01890
location: 397518..398612
location: region:397518-398612:1
so has part: feature:397518-398612:1:exon

WP_119797091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397518-398612:1:exon

CCS41_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01895
old locus tag: CCS41_01900
so part of: sequence
location: 398814..399560
location: region:398814-399560:1
so has part: feature:398814-399560:1:exon
subclass of: SO_0000010

position:398814:1
position: 398814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399560:1
position: 399560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398814-399560:1:exon

CCS41_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01895
old locus tag: CCS41_01900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016160818.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLHLDTEGKAVLENGMPVYLHEDGKAIPFDAVAALNKISALNGEAKSHREAKEALEAKLKAFAGIDDPAKAREALQTLTHIDQKKLIEAGAVDQVKAQITQAFQTQLDEASSKNKTLEAQLYQEMIGGRFSSSAFIQDNLAIPADLVQARFGHAFSIDAGKVVATDAAGNKVFSRRQPGEIAEFEEALEYLIEQYPHKDHILKASGHRGGGSQPTPQQHGHKTLKRSAFDALDIGSKQAALKDGIYR
SIO_010081: CCS41_RS01895
subclass of: SO_0000673
so part of: CCS41_RS01895
location: 398814..399560
location: region:398814-399560:1
so has part: feature:398814-399560:1:exon

WP_119797092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398814-399560:1:exon

CCS41_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01900
old locus tag: CCS41_01905
pseudo: true
so part of: sequence
location: <399553..>399951
location: region:399553-399951:1
so has part: feature:399553-399951:1:exon
subclass of: SO_0000010

position:399553:1
position: 399553
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:399951:1
position: 399951
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399553-399951:1:exon

CCS41_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01900
old locus tag: CCS41_01905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000835351.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage antirepressor N-terminal domain-containing protein
SIO_010081: CCS41_RS01900
subclass of: SO_0000673
so part of: CCS41_RS01900
location: <399553..>399951
location: region:399553-399951:1
so has part: feature:399553-399951:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399553-399951:1:exon

CCS41_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01905
old locus tag: CCS41_01910
so part of: sequence
location: 399988..400263
location: region:399988-400263:1
so has part: feature:399988-400263:1:exon
subclass of: SO_0000010

position:399988:1
position: 399988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400263:1
position: 400263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399988-400263:1:exon

CCS41_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01905
old locus tag: CCS41_01910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQQIPLLAEECCRIYALTNQLKKAIFEAEKQIIKRVLRHGENENVVLYEMKQLLDAVIQEENTTFAETLEKWQQLDINKFLQRDYNRIANH
SIO_010081: CCS41_RS01905
subclass of: SO_0000673
so part of: CCS41_RS01905
location: 399988..400263
location: region:399988-400263:1
so has part: feature:399988-400263:1:exon

WP_119797094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399988-400263:1:exon

CCS41_RS16260
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16260
pseudo: true
so part of: sequence
location: <400361..400495
location: region:400361-400495:1
so has part: feature:400361-400495:1:exon
subclass of: SO_0000010

position:400361:1
position: 400361
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:400495:1
position: 400495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400361-400495:1:exon

CCS41_RS16260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16260
inference: COORDINATES: protein motif:HMM:NF016136.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II toxin-antitoxin system antitoxin, RelB/DinJ family
SIO_010081: CCS41_RS16260
subclass of: SO_0000673
so part of: CCS41_RS16260
location: <400361..400495
location: region:400361-400495:1
so has part: feature:400361-400495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:400361-400495:1:exon

CCS41_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01915
old locus tag: CCS41_01915
pseudo: true
so part of: sequence
location: 400482..400762
location: region:400482-400762:1
so has part: feature:400482-400762:1:exon
subclass of: SO_0000010

position:400482:1
position: 400482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400762:1
position: 400762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400482-400762:1:exon

CCS41_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01915
old locus tag: CCS41_01915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013521176.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
SIO_010081: CCS41_RS01915
subclass of: SO_0000673
so part of: CCS41_RS01915
location: 400482..400762
location: region:400482-400762:1
so has part: feature:400482-400762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:400482-400762:1:exon

CCS41_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01925
old locus tag: CCS41_01920
so part of: sequence
location: 401119..401841
location: region:401119-401841:1
so has part: feature:401119-401841:1:exon
subclass of: SO_0000010

position:401119:1
position: 401119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401841:1
position: 401841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401119-401841:1:exon

CCS41_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01925
old locus tag: CCS41_01920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704151.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LuxR family transcriptional regulator
translation: MDKVNPRKKKANSQRVTVKSFDSLFSFMDASDEPWNVKDTESRHVYANEAAFDFLDLPIGYDIEGRLDDECPAPWAEFAPEFQKQDRETESKGKSVAIISTQFYTRAQKLLSYFVPKYPVYNESQECIGTIYTASKLDYLCLSQGLNNRVPSTLVLDPPTDLFTKPELKVMFYALQSMNAEEIGRKLDHPQQAIKDNLRRIYKKAKVNSSAMFKEFCCAEGFDRYMPPELIKPEVQFISL
SIO_010081: CCS41_RS01925
subclass of: SO_0000673
so part of: CCS41_RS01925
location: 401119..401841
location: region:401119-401841:1
so has part: feature:401119-401841:1:exon

WP_240313799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401119-401841:1:exon

CCS41_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01930
old locus tag: CCS41_01925
pseudo: true
so part of: sequence
location: 401871..403159
location: region:401871-403159:1
so has part: feature:401871-403159:1:exon
subclass of: SO_0000010

position:401871:1
position: 401871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403159:1
position: 403159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401871-403159:1:exon

CCS41_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01930
old locus tag: CCS41_01925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704072.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytosine permease
SIO_010081: CCS41_RS01930
subclass of: SO_0000673
so part of: CCS41_RS01930
location: 401871..403159
location: region:401871-403159:1
so has part: feature:401871-403159:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401871-403159:1:exon

CCS41_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01935
old locus tag: CCS41_01930
so part of: sequence
location: complement(403197..403565)
location: region:403197-403565:-1
so has part: feature:403197-403565:-1:exon
subclass of: SO_0000010

position:403197:-1
position: 403197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403565:-1
position: 403565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403197-403565:-1:exon

CCS41_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01935
old locus tag: CCS41_01930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011192920.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MTKLQYINDETGKPLYVLLPVTDYEKLVDNTDDDYESVPYKADHHDDEIIPHDVISIMVNQDISLIAAWRIYLGMSQYEVAEKLQATQSAVSQWESVDSTPQKKTRKKLAALYGCRLEQMTL
SIO_010081: CCS41_RS01935
subclass of: SO_0000673
so part of: CCS41_RS01935
location: complement(403197..403565)
location: region:403197-403565:-1
so has part: feature:403197-403565:-1:exon

WP_072551175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403197-403565:-1:exon

CCS41_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01940
old locus tag: CCS41_01935
so part of: sequence
location: complement(403637..403897)
location: region:403637-403897:-1
so has part: feature:403637-403897:-1:exon
subclass of: SO_0000010

position:403637:-1
position: 403637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403897:-1
position: 403897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403637-403897:-1:exon

CCS41_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01940
old locus tag: CCS41_01935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002214785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MVKINWLRRASKQLVMIDPRYRKAISEKVSKLTTFPTTELDIKKLRTTDNQYRIRVGNYRIIFEVTDGEPVICTIQQIKRRASKTY
SIO_010081: CCS41_RS01940
subclass of: SO_0000673
so part of: CCS41_RS01940
location: complement(403637..403897)
location: region:403637-403897:-1
so has part: feature:403637-403897:-1:exon

WP_072551174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403637-403897:-1:exon

CCS41_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01945
old locus tag: CCS41_01940
so part of: sequence
location: 404185..404382
location: region:404185-404382:1
so has part: feature:404185-404382:1:exon
subclass of: SO_0000010

position:404185:1
position: 404185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404382:1
position: 404382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404185-404382:1:exon

CCS41_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01945
old locus tag: CCS41_01940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704348.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class II holin family protein
translation: MEKLTTGVAYGASAGSILNGLLNSYSPEQWNAIGVLAGVSLAVLTYLTNLYFKIKEDRRKSGTSQ
SIO_010081: CCS41_RS01945
subclass of: SO_0000673
so part of: CCS41_RS01945
location: 404185..404382
location: region:404185-404382:1
so has part: feature:404185-404382:1:exon

WP_119797098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404185-404382:1:exon

CCS41_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01950
old locus tag: CCS41_01945
so part of: sequence
location: 404379..404897
location: region:404379-404897:1
so has part: feature:404379-404897:1:exon
subclass of: SO_0000010

position:404379:1
position: 404379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404897:1
position: 404897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404379-404897:1:exon

CCS41_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01950
old locus tag: CCS41_01945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705849.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysozyme
translation: MSKLSKPMLGLILAGTTATAILAQFLHEKEGNRLKAYRDGANVWTICRGATRVDDKPVMQGLQLSAEKCEQVNKFEVNKAIAWVERHVQVPLSDAQKAGIASFCPYNIGAGKCLSSTFYRKLNAGDYHGACAEIKRWLFDGGKNCRIRANNCAGQVMRRAQESELTCWGLDV
SIO_010081: CCS41_RS01950
subclass of: SO_0000673
so part of: CCS41_RS01950
location: 404379..404897
location: region:404379-404897:1
so has part: feature:404379-404897:1:exon

WP_119797099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404379-404897:1:exon

CCS41_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01955
old locus tag: CCS41_01950
so part of: sequence
location: 404960..405349
location: region:404960-405349:1
so has part: feature:404960-405349:1:exon
subclass of: SO_0000010

position:404960:1
position: 404960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405349:1
position: 405349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404960-405349:1:exon

CCS41_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01955
old locus tag: CCS41_01950
inference: COORDINATES: protein motif:HMM:NF015218.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysis protein
translation: MLNQKKKDSVIKMIRNERDNLFIMLQTTQKQHQQIAVLDNKHTQELTDAKTQLAALERDVLAGQRRMQLAARSEKLPATPTATRLDDAAGARLDDAVVNDYFRLRKGIEIVTQQIAGLQAYVTQVCLAQ
SIO_010081: CCS41_RS01955
subclass of: SO_0000673
so part of: CCS41_RS01955
location: 404960..405349
location: region:404960-405349:1
so has part: feature:404960-405349:1:exon

WP_119797100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404960-405349:1:exon

CCS41_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01960
old locus tag: CCS41_01955
so part of: sequence
location: 405492..405734
location: region:405492-405734:1
so has part: feature:405492-405734:1:exon
subclass of: SO_0000010

position:405492:1
position: 405492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405734:1
position: 405734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405492-405734:1:exon

CCS41_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01960
old locus tag: CCS41_01955
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIASTQEHPMYTIKVTFGNGQGEVGYPSAHWGWNRNAQRLDIVSEGISDAIHLAPSDTVSVLNAAGQPVATYTHLDKSP
SIO_010081: CCS41_RS01960
subclass of: SO_0000673
so part of: CCS41_RS01960
location: 405492..405734
location: region:405492-405734:1
so has part: feature:405492-405734:1:exon

WP_162920494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405492-405734:1:exon

CCS41_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01965
old locus tag: CCS41_01960
so part of: sequence
location: 405752..406237
location: region:405752-406237:1
so has part: feature:405752-406237:1:exon
subclass of: SO_0000010

position:405752:1
position: 405752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406237:1
position: 406237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405752-406237:1:exon

CCS41_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01965
old locus tag: CCS41_01960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002462757.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKPDWEAIESAYRAGALSVRAIAKRYQVPESTLRKFAVRNAWQRDLTEKVAAATKDKVVRSAAVRTFSTKNTVRTDHDIIEQASDEALSVVLSHRVALAGWRQIANHLKAFLSSIVITEDNHASLARTLSAGVDAQLKLIKGERDAYGLNNETAPAQRKS
SIO_010081: CCS41_RS01965
subclass of: SO_0000673
so part of: CCS41_RS01965
location: 405752..406237
location: region:405752-406237:1
so has part: feature:405752-406237:1:exon

WP_119797102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405752-406237:1:exon

CCS41_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01970
old locus tag: CCS41_01965
so part of: sequence
location: 406274..407764
location: region:406274-407764:1
so has part: feature:406274-407764:1:exon
subclass of: SO_0000010

position:406274:1
position: 406274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407764:1
position: 407764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406274-407764:1:exon

CCS41_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01970
old locus tag: CCS41_01965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017628803.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: terminase
translation: MAFNATLKAQLADRFWRLNHLYFITDKHGRKIRFTMTAQQRAYFTGMHTRNLILKARQLGFTTEVCLIQLDAALFESAKCALIAHTLNDAKRLFREKVKYAYDHLPDLLKRANPARNDSAGELVFHNGGSLYISTSFRGGTLRYLHISEFGKLCAKFPEKAREIVTGAFEAVATDCVVTIESTAEGRAGYFFDYCQTAEKALLSNKPLGPLDWKFFFFSWWNNPQYALPVSSPLPPRLQAYFSELQTKQSIRLTAEQKAWYYAKESTLGDDMKREYPSIPSEAFQQSIEGAYYANQFRYLYENQRIGTLPANPHLPVHTFWDLGVGDATVIWFVREVGSEFHLMDYYENSGEGLRHYMQVLKARAYHYGEHWAPHDIDNRELAGDGKSRRQLAYEGYDLDGDIYRINFRVVPRLCIDEGIESVREILPRCAFDSVTCEQGLSHLERYRKAWDNQHGCWKDKPLHDASSHAADAFRYFAVAKRNHRQLRGQVTPLRL
SIO_010081: CCS41_RS01970
subclass of: SO_0000673
so part of: CCS41_RS01970
location: 406274..407764
location: region:406274-407764:1
so has part: feature:406274-407764:1:exon

WP_119797103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406274-407764:1:exon

CCS41_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01975
old locus tag: CCS41_01970
pseudo: true
so part of: sequence
location: 407807..409182
location: region:407807-409182:1
so has part: feature:407807-409182:1:exon
subclass of: SO_0000010

position:407807:1
position: 407807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409182:1
position: 409182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407807-409182:1:exon

CCS41_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01975
old locus tag: CCS41_01970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001469190.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF4055 domain-containing protein
SIO_010081: CCS41_RS01975
subclass of: SO_0000673
so part of: CCS41_RS01975
location: 407807..409182
location: region:407807-409182:1
so has part: feature:407807-409182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407807-409182:1:exon

CCS41_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01980
old locus tag: CCS41_01975
so part of: sequence
location: 409277..410341
location: region:409277-410341:1
so has part: feature:409277-410341:1:exon
subclass of: SO_0000010

position:409277:1
position: 409277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410341:1
position: 410341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409277-410341:1:exon

CCS41_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01980
old locus tag: CCS41_01975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015964693.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTVNQRLRDEALAHSLFQSRYAHGVAKEKVAILNQYDAELTARLFGKLEKVNPQHIEVKQLARLLACVQEVNQQAMSTLYLSLSEELLAFAEHEAGYHCRLVDKLLPDVVLHRYPLAIITAEQVYAAAMAQPFQGRLLRDWVSHLESDRFQRINNAVKNGFLLGDTIEQITRKVRGSRAKQYQDGVLDISRKNLTSVVKTAVNHVSAVARDKFAENNAAMIDRKQWLSTLDNKTSSPCVIRDRLCYTLAGQPLGHKIPYLQGPGRLHFCCRSTETLVIKSWRALGIDLDELDPGTRASLDGQVPADTTYADWLQQQPYARQVQVLGKTRAKMLRNGGLCPDVFFSDKGNQLIE
SIO_010081: CCS41_RS01980
subclass of: SO_0000673
so part of: CCS41_RS01980
location: 409277..410341
location: region:409277-410341:1
so has part: feature:409277-410341:1:exon

WP_119797105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409277-410341:1:exon

CCS41_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01985
old locus tag: CCS41_01980
so part of: sequence
location: 410585..411325
location: region:410585-411325:1
so has part: feature:410585-411325:1:exon
subclass of: SO_0000010

position:410585:1
position: 410585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411325:1
position: 411325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410585-411325:1:exon

CCS41_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01985
old locus tag: CCS41_01980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKIPSYYSARVITSPCPRDIMTPHEKNNKIDEINEKLTSSDEKLRLSDNKGLSEDERKSFRSDLLCFSRLHSYEIDSAYKEIFKRIIVKCYLKTIDFHPKTENELKNQEEKFSDIERFSAKENFDLQKDLPGNGIQDYKDVFYHNYASHLLDSKPVTAEIAAKIHEIYTKKISDRAECTNIIVEKLWTNFKKLQEANQQMKERKSISIKLNLLEKNFNDLIEKHEIDIPDSVTENIKSLKKYSHL
SIO_010081: CCS41_RS01985
subclass of: SO_0000673
so part of: CCS41_RS01985
location: 410585..411325
location: region:410585-411325:1
so has part: feature:410585-411325:1:exon

WP_162859954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410585-411325:1:exon

CCS41_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01990
old locus tag: CCS41_01985
so part of: sequence
location: 411804..412553
location: region:411804-412553:1
so has part: feature:411804-412553:1:exon
subclass of: SO_0000010

position:411804:1
position: 411804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412553:1
position: 412553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411804-412553:1:exon

CCS41_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01990
old locus tag: CCS41_01985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016160818.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLHLDTEGKAVLENGMPVYLHEDGKAIPFDAVAALNKISALNGEAKSHREAKEALEAKLKAFAGIDDPAKAREALQTLTHIDQKKLIEAGAVDQVKAQITQAFQTQLDEASSKNKTLEAQLYQEMIGGRFSSSTFIQDNLAIPADLVQARFGHAFSIDAGKVVATDAAGNKVFSRRQPGEIAEFEEALEYLIEQYPHKDHILKASGHRGGGSQPTPQQHGHKTLKRSAFDALDIGSKQAALKDGILTG
SIO_010081: CCS41_RS01990
subclass of: SO_0000673
so part of: CCS41_RS01990
location: 411804..412553
location: region:411804-412553:1
so has part: feature:411804-412553:1:exon

WP_119797106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411804-412553:1:exon

CCS41_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS01995
so part of: sequence
location: complement(412440..414440)
location: region:412440-414440:-1
so has part: feature:412440-414440:-1:exon
subclass of: SO_0000010

position:412440:-1
position: 412440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414440:-1
position: 414440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412440-414440:-1:exon

CCS41_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS01995
inference: COORDINATES: protein motif:HMM:NF012573.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGGNDILTLEQGRADGGTEEDSYIILQNASAENAEIAIIDTGSASAENNHVLLKHSAPQIQSIALVKKDRAWVNEKWVNRDNYTLRILLANDNGTSTQLDLEDAYQSSVDSRQLQAQNRYSLTTGDGIQIDTTSWPETLTVADKKTVRGVESWSLPVLSAQYVVLLDNRKPSNRSFDLSREIDADALPALKADIAKINTVIGDATLGDWIQGDEANNQLNGQGGYSVLYGMGGNDILTLEQGWADGGTEEDSYIILQNIRTENAEITIIDTGSAVAENNHLVLKQDAQQIQSIILMIKNHAWVNGGWQNRDNYTLRILLANDNGTTTQLDLEDAYQRSEDGKQLKLHNRYSLTTRDGLQIDTNSWPKTLQVDDKTTNESGLCTWSLPVLSAQYVPIFDSKRSAFLGSAAAEQSMIELIQKNAQGQSEITVGGQKTVLPKSMTLVLGDTAYKDTIEGDDSNNALSSVQGNDHLKGKAGSDVYHLYHTPNISKTLTIDNEDLTTNPAIDVIILHSVSMDQLNTVIHQNEGDLVLGATIPNLAVGILELRLRHFMQDKRYQHAVILDKTGDYYLVEKGEDDKAHIYPAYFDQPSGEFKRGERQDNLQTQATSGDDRVTLSNAALLLENTFRALAGKDTVFECGLFAADVQGIKGAAFECFVSVLLGCGL
SIO_010081: CCS41_RS01995
subclass of: SO_0000673
so part of: CCS41_RS01995
location: complement(412440..414440)
location: region:412440-414440:-1
so has part: feature:412440-414440:-1:exon

WP_119797107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412440-414440:-1:exon

CCS41_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02000
old locus tag: CCS41_01990
so part of: sequence
location: complement(414550..420126)
location: region:414550-420126:-1
so has part: feature:414550-420126:-1:exon
subclass of: SO_0000010

position:414550:-1
position: 414550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420126:-1
position: 420126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414550-420126:-1:exon

CCS41_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02000
old locus tag: CCS41_01990
inference: COORDINATES: protein motif:HMM:NF015462.2
GO component: GO:0005576 - extracellular region [Evidence IEA]
GO function: GO:0008294 - calcium- and calmodulin-responsive adenylate cyclase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anthrax toxin-like adenylyl cyclase domain-containing protein
translation: MMTNSQQHHSFSNFVPVIEGEDAIKASGIVDEHVKQFIKLAKRKDTFFIFRPVNGLSTSLIKQGAATKGMEVHGKSADWGPMAGYIPFDQDLSKQFGNHDAVIKGNANNVHSINDSQGSIKKTILRIDMDRLKELQDKGILNWQPTTGEIIILHKGADTYQFRLNKQDDNNYTVDYRTLPTAASTLNETFTWRPVEVIGKEINGITTPLTADYDLFMVAPKLQNVVDLKTLGGRKHSLKEITQLISEQGLGQIARRQSDTEKGRLPVWLRDDINDLNRVAKEAGYQGGTLVNHGSEMDNPFPEQDQRLFVITPEGKTFLTTRWEDTQQVIRDIHQQGYIVYRNRSYNSLSVTTSSDGQQQVKMIVWGDSLPSLNEFDKYITEFIKIVDSGEILPGLNNIRNVLAEYYLNQDKDLSEQNKKIFIIKGQFKQLLNEHGLKSENIKIALNAMYQCIDIYERIVFTPQLMRLVTQIDHVLSPTSQVTKRFNTMTAEPSVRTELPSVMRDQTPAAPISIFELKRATDGTYILINEVTPNGKIPPDGKYFFVNPIGKNAGKIIVAHEDDAQGHSSLTVRHKDSSVSFVDAESVYYAGELTFSNGELLEWTNESGHYKPPIDHATQMKLDDPSLLSSEKFRAFEVPPKPVDIPPPVPPRPAHTFSVMPSVPVTAPTVRESRPPLSYSGEPTESSIPSILYQIVVVQAHDEDAMRAAGQWLKEDQGRRFLIGMHGEHLNLYSPNGNPADVPQDALQAFRRTIALTPNPSVSMLFIGEKDVSGFVKAEQVAFLPDGTLVVQDDALDEQTEATRWNGQSLDDTQKMILGFINENLTGIRAENIQVKLGQITGISDLDADNEPLPFRSSVTVDYIVPLTTSAEGHIIIQDLVEQAPTPRQTGMPGGNAGFNHPVKPIQPVNLPMTPVPDNLPTKLHRTTELLDQVADGRTTIQSLDMASRDLLTEAFHLSDGQLDSQKLLLHAHSPENRQAWDKAIRQLLQDPATYNEQANLSLQDALAQQQHLHQQQQQRAREFFQAGANTQKVNPGVETNTHLIPPSYSLRKGIDSGRDSDAWSLAFLDAKQAGKTQYDIFSAGLTADAGRRARLIDGSASGSEMAYSDYLHGQFEQLKNSSALSVDNPTIFTRHNVQDLFGATPAAGAYLLKGTHHSVALHIHQSGSGYTYSLYDPQVGSVDLTALSTGEHRPALHGLLDNYLQGTNAAGQTRSQQYGIEKTGTRYAFAAYQVNIEQARALTPLGEFQTSLNNEVAARTLLSSVTLDGVTLPTNILLDMGAIFEGKPRTLEHFTDTDSASLKTLRFRPQQLHDFLTKNNLNDPAFEPGLRLIRQRMNGIDGDTSPLLARGLLQEQKIAKKTLALLGKVNRHTLVNTDGTLTVKPTLMPSLQPKSRWHRVSNVTGYAGLGMSGLGYYLGYKAIAGYEEALKQQGLTPEKRQQLEFERNFAIASINTNFAVDIGQYGLSRMTASVSSSAAKLGGNMATKARFIKVGGAALSLVGVGFDIYGAYRSFSQLATETDPDIRQDLIVSGSLSVAGAAVGLAVTGAFIAGGTAAVAAGPIGLAVGGVLMLAGLGYSAARQVKEIEKHIYLTVDEKWNTGWRVFWGSHPSKAIQDKMAETQRSVYRETCDEFLRNTARSMMRERGITPIYHYVYSGKDFDLVSHPYWQLDSAYVDYYKALASRIEGENLEKEKRRLGREYALEIGDFEATKTGEYYYTPVFKEVDDYVVAASGSIKNAVRFDNLANGAADGIVLFNLGDGNDSAFGYKGRKNTFLGGKGKKHYVGDTLNDLFYLGNDNQSSATSDFEGSRFYGKAGEDTLIIAATPSGISGYSIDLREELVCYYNRGSRLIGWQ
SIO_010081: CCS41_RS02000
subclass of: SO_0000673
so part of: CCS41_RS02000
location: complement(414550..420126)
location: region:414550-420126:-1
so has part: feature:414550-420126:-1:exon

WP_119797108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414550-420126:-1:exon

CCS41_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02005
pseudo: true
so part of: sequence
location: <420431..420610
location: region:420431-420610:1
so has part: feature:420431-420610:1:exon
subclass of: SO_0000010

position:420431:1
position: 420431
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:420610:1
position: 420610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420431-420610:1:exon

CCS41_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611091.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: CCS41_RS02005
subclass of: SO_0000673
so part of: CCS41_RS02005
location: <420431..420610
location: region:420431-420610:1
so has part: feature:420431-420610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420431-420610:1:exon

CCS41_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02010
old locus tag: CCS41_01995
so part of: sequence
location: complement(420682..421740)
location: region:420682-421740:-1
so has part: feature:420682-421740:-1:exon
subclass of: SO_0000010

position:420682:-1
position: 420682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421740:-1
position: 421740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420682-421740:-1:exon

CCS41_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02010
old locus tag: CCS41_01995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011147937.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISAs1 family transposase
translation: MSILKQLALIPDPRKDINIKHHLLDVIFLFFAAVLSGASGWKSIQDFGEAQLDWLKKYGSYHGGSPRRHCIAKIINALDTNLLIQSLFLWINERRQRAGKTLLAIDGKTLRRTWSEEICTALHVVSAYDVDAGITLYQKAANNKGKEGELARQSIDALALDNAIVTLDSLHCQTSTSSLITQRKGNFVVQLKATQKKLFEQVKQQFAFAYDSDKLHEYTQTNQWHGRIEKRTVMQINAELPNELKAKWPTIRTFIEVASERTKNNVTHCRSRWYVSSLPLNAEQAAQAIRLHWGIENQLHWVLDVVFREDELLIKAPDGAAHVALFNRVALGVIKQHKGKQDSIASKRRRAA
SIO_010081: CCS41_RS02010
subclass of: SO_0000673
so part of: CCS41_RS02010
location: complement(420682..421740)
location: region:420682-421740:-1
so has part: feature:420682-421740:-1:exon

WP_119797109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420682-421740:-1:exon

CCS41_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02015
old locus tag: CCS41_02000
so part of: sequence
location: complement(421839..422276)
location: region:421839-422276:-1
so has part: feature:421839-422276:-1:exon
subclass of: SO_0000010

position:421839:-1
position: 421839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422276:-1
position: 422276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421839-422276:-1:exon

CCS41_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02015
old locus tag: CCS41_02000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705284.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0060567 - negative regulation of termination of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antiterminator Q family protein
translation: MRDINLILERWGTWARYSSRMDYSPIAAGFKGLFPASPNKTISCSDDDGMIIDHAVGRLKAVRKPEELTLILAHYVYCIPKRVIAKKWKCSESEIRRKIQVAEGFIDGCLAMKHVCLHMDPYVQKKGVQTDIIGKINTYASGSVR
SIO_010081: CCS41_RS02015
subclass of: SO_0000673
so part of: CCS41_RS02015
location: complement(421839..422276)
location: region:421839-422276:-1
so has part: feature:421839-422276:-1:exon

WP_072550813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421839-422276:-1:exon

CCS41_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02020
old locus tag: CCS41_02005
so part of: sequence
location: complement(422467..422796)
location: region:422467-422796:-1
so has part: feature:422467-422796:-1:exon
subclass of: SO_0000010

position:422467:-1
position: 422467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422796:-1
position: 422796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422467-422796:-1:exon

CCS41_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02020
old locus tag: CCS41_02005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011095216.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVELEIWTLISLLLSFFGFLFAAGRILLTQIEKRFHERFSALEMACYQNVKTASRSERTFLEFRADLPLKYVRREDHIRVQNIIDTKLDTIYNQLSALQSNSKRNKRD
SIO_010081: CCS41_RS02020
subclass of: SO_0000673
so part of: CCS41_RS02020
location: complement(422467..422796)
location: region:422467-422796:-1
so has part: feature:422467-422796:-1:exon

WP_072550816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422467-422796:-1:exon

CCS41_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02025
old locus tag: CCS41_02010
so part of: sequence
location: complement(422801..423418)
location: region:422801-423418:-1
so has part: feature:422801-423418:-1:exon
subclass of: SO_0000010

position:422801:-1
position: 422801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423418:-1
position: 423418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422801-423418:-1:exon

CCS41_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02025
old locus tag: CCS41_02010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010281031.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWNKTSIVLGMLGLTLCTVLMASLYYTGHTHGFQHAKALGERALAQQQAKFSQKKQQQAEAHLAELQIAIERYQQQTLRANQLEQTYLSTRQRLTTNNAQLQRKINDFTQRYIDQQGQSHPMQCVFTRGFVQQYNKANGIPTNDNTALTGSIIPTPSGGVPADGKLYASGVTARDILANINDNGEQCQALKAQVNGLLDYINGLG
SIO_010081: CCS41_RS02025
subclass of: SO_0000673
so part of: CCS41_RS02025
location: complement(422801..423418)
location: region:422801-423418:-1
so has part: feature:422801-423418:-1:exon

WP_240313800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422801-423418:-1:exon

CCS41_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02030
old locus tag: CCS41_02015
so part of: sequence
location: complement(423408..423980)
location: region:423408-423980:-1
so has part: feature:423408-423980:-1:exon
subclass of: SO_0000010

position:423408:-1
position: 423408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423980:-1
position: 423980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423408-423980:-1:exon

CCS41_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02030
old locus tag: CCS41_02015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011095214.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase SLT domain-containing protein
translation: MIACNTAVANPAPASLPYRTDVIRNARIEWGINAPIADFAAQFHQESSWIPSAMSPQGAQGLAQFIPSTARWFSNMIPALRANQPFNPSWGIRALISYDRWLWWRIQAANDCEQMAMTLSAYNGGLKWVQRDQKLAVQKELDHLRWFKQVETVNAGRSQANWRENRHYPQRILHTLAPRYLLWGGSYCVE
SIO_010081: CCS41_RS02030
subclass of: SO_0000673
so part of: CCS41_RS02030
location: complement(423408..423980)
location: region:423408-423980:-1
so has part: feature:423408-423980:-1:exon

WP_072550812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423408-423980:-1:exon

CCS41_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02035
old locus tag: CCS41_02020
so part of: sequence
location: complement(424047..424385)
location: region:424047-424385:-1
so has part: feature:424047-424385:-1:exon
subclass of: SO_0000010

position:424047:-1
position: 424047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424385:-1
position: 424385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424047-424385:-1:exon

CCS41_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02035
old locus tag: CCS41_02020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015365653.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative holin
translation: MNHMKKINKPRLSGWIITSILLLAIISLISPQQLPVVIYKLSLITLAAVLGYWLDRSLFPKARPDQYLCDEGDVTAKNRYPVSRGDQRVFSAIMIRRALIVAAVCIAVAIGL
SIO_010081: CCS41_RS02035
subclass of: SO_0000673
so part of: CCS41_RS02035
location: complement(424047..424385)
location: region:424047-424385:-1
so has part: feature:424047-424385:-1:exon

WP_072550811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424047-424385:-1:exon

CCS41_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02040
old locus tag: CCS41_02025
so part of: sequence
location: complement(424564..427437)
location: region:424564-427437:-1
so has part: feature:424564-427437:-1:exon
subclass of: SO_0000010

position:424564:-1
position: 424564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427437:-1
position: 427437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424564-427437:-1:exon

CCS41_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02040
old locus tag: CCS41_02025
inference: COORDINATES: protein motif:HMM:TIGR03696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RHS repeat-associated core domain-containing protein
translation: MTTHFNPNLYRGTPTIKVVDNRGLAVRELQYNRTSEQESVKEGISRSEYNAEGHVINHIDPRLYHAQLTQLSIKPNFTYQSDLVGNALYTDSVDAGCQMILKDIEGRPVWKREARGTEQRWQYETGKNGRLLAVSEQPVGGTADRVIERFIYAPVNEENKKYNLSGRLLHHYNTAGVNTLRSVALTGQPLREACQLLRNIDQPLDWRGEDQTTWNTLLAEETFTTRNRYNAAGKPITHIDAKGNQQGLVYDVAGQLQASRLTIHNQPEQRIVDSLTYSAAGQKLCEISGNGVKTEYRYDPQNLRLINSKTTRQSDRKILQDLHYQHDPVGNILSIEDHAINRRFYKNQEIKAQSRYSYDALYQLSTATGRESYGQRNPQVVTPPPLIGDQNHTVNYSREYTYDSGGNLIQIQHHGANRYTTHINVSQQSNHALFQDGDERQSHQIESLFDAAGNQQQLQYHAEKLMWNSRNQLQQVIRVNRDGNPDDVEKYHYDSTGRRVIKQQFTLTGGTLSQKKVVYLSGLELHTKKRGDEIKESLQVINVGVAGQAQVRVLHWETPPPHGIQNNSLRYSYDNSIGSSQLELDGDGNLISQEEYYPFGGTALWAARSTIEASYKTLRYSGKERDASGLYYYGYRYYQPWIGRWLNADPAGTIDGLNLYRMVRNNPVLLSDQDGLAPPIDINHKEGLQAFTGFANHVKGTLHIPFRDRTLNELAQPFYKEMVNQHDEDLGKLFIEALEQQNESSRSIVAEYHKFAEQGDIMQAASPQQTANMVGVTVNFLTDVHNGGEKTKSIRTDLEHKKRIKPALAATFTDQMVRDGLLLRKIVKCRNTLYATLESKGEIVQEFTAFSGDFDPLTYRFHNLNSEVHYIHGSERDENPAKLYPISTMGGEQPVSRSTDTETKLLEAVHHCIGMNPGDYTLNITSTLRPCHSCAAMLAKFSNDHRMKINMFYVDGK
SIO_010081: CCS41_RS02040
subclass of: SO_0000673
so part of: CCS41_RS02040
location: complement(424564..427437)
location: region:424564-427437:-1
so has part: feature:424564-427437:-1:exon

WP_072550810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424564-427437:-1:exon

CCS41_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02045
old locus tag: CCS41_02030
so part of: sequence
location: complement(427434..430661)
location: region:427434-430661:-1
so has part: feature:427434-430661:-1:exon
subclass of: SO_0000010

position:427434:-1
position: 427434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430661:-1
position: 430661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427434-430661:-1:exon

CCS41_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02045
old locus tag: CCS41_02030
inference: COORDINATES: protein motif:HMM:NF023676.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toxin TcdB middle/C-terminal domain-containing protein
translation: MCPPPLEFGYQTSQPTITSSPWQPISWQQSNGLNGFQDGRNYQLVDLYGEGIPGILYQDQGAWWYRAPQRDGEVTPENDTVTYSAATRLPQIPSLRDGARLMDMTGSGRLDWVVTQANIAGYYGIRADKTWTHFTPLSALPSEFFHPAAQQADLMGHGLFDLVLIEGNSVRVYANQRDGFSKSQGITLPEGVSLPTPTDSLTWLAFSDVLGSGQPHWVQIRHDGVTCWPNLGQGRFGQPITLPGFEQPRATFQPNYVFLADLDGSGLPDLVYAQSDRLLIYCNQSGNHFAEPKILLLPPDIRYDDSCQITLADIQGQGVTSVILSLFHPTPRHWRCDWVQKKSNLLTDVNNNRGMRYQLQYRSSAQCWLDEKATVKAQPHASDLPFPLHLLTKICTEDEITGNRLTQVASYSQGVYDNREREFRGFGRVDTWDTETLGNGANTKQSRTWYHTGQTQDETRHQHEFWAKDSHAFPRKATLFTTFNRDQDQPTTPTEEEAYWLYRALNGSMLRTEVYGLDGDLSDKNSKASIPYTVSESRYQVRRIQASMPSPERKNLSIVVLPLLIEQRDYYYERIISDPQCQQQILFQSDEWGYPLHSATLHYPRRPRATESPYPTDLPLTSWSSSYDQQQEVLRSTVTRQRWHHLTTQGVWRLGLPDLQQTDILHYAQDQIPEQGLSREVQPLNPEHKTSTFAGQQQIFYTANQSDRPLEKPTVQALVAFTETAVLNERTLTAFADKLTGEALERQLVAAGYLPASAQFSPSEKIWLIRQGQTDYANSTGFYRPLRQCSTSLMGKSTLTWDKYYCVIKKITDSVGQMTEADYDYRFLTPFQIKDLNDNTHWAQFDALGRLCASGFYGIEEGIAVGFPKPEPGQFHLPRTVDEALAWTGPLPVAQFHVFAVDSWMMKEPHRLPPHIATVVTDRYVDNAPQKLSQQVMFSDGFGRLLQTSVRHEAGTAYQRHSEGALMQTAPQFTARRWAVTGRKEYDHKGQPVRIYPPYYLDDWRYVNDDSARENRVSDVVYYDPLGREIQKIDTKGYLSRTRFFPWFTVHEDENDTAAEVLEKRQQNMTETPGS
SIO_010081: CCS41_RS02045
subclass of: SO_0000673
so part of: CCS41_RS02045
location: complement(427434..430661)
location: region:427434-430661:-1
so has part: feature:427434-430661:-1:exon

WP_162859955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427434-430661:-1:exon

CCS41_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02050
old locus tag: CCS41_02035
so part of: sequence
location: complement(430643..431425)
location: region:430643-431425:-1
so has part: feature:430643-431425:-1:exon
subclass of: SO_0000010

position:430643:-1
position: 430643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431425:-1
position: 431425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430643-431425:-1:exon

CCS41_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02050
old locus tag: CCS41_02035
inference: COORDINATES: protein motif:HMM:NF015497.2
GO component: GO:0005737 - cytoplasm [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SpvB/TcaC N-terminal domain-containing protein
translation: MIVQKTADGQPDSQNHIVECQGIPLSESFTVTRYRPRVERAFSRIEYWQPMDESPTRPFWLVYTADGQLHCLGKNASARIADPADNRRVAIWLLEESVSPTGEHICYTYRAEDDTTDSAQQYLSHIYYGNLAAKEALFSWDTQVPTADNWLFTLVFDYGERSFSVKDRPTFNTEISWPVRLDCFSRYEYGFNLRTRRLCHQILMFHRLKALSGEENVTDETPALVSRWLLAYEQNTAVTTLVSCRHLAHEETGNPCALPR
SIO_010081: CCS41_RS02050
subclass of: SO_0000673
so part of: CCS41_RS02050
location: complement(430643..431425)
location: region:430643-431425:-1
so has part: feature:430643-431425:-1:exon

WP_240313801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430643-431425:-1:exon

CCS41_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02055
old locus tag: CCS41_02040
so part of: sequence
location: complement(431430..437501)
location: region:431430-437501:-1
so has part: feature:431430-437501:-1:exon
subclass of: SO_0000010

position:431430:-1
position: 431430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437501:-1
position: 437501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431430-437501:-1:exon

CCS41_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02055
old locus tag: CCS41_02040
inference: COORDINATES: protein motif:HMM:NF015501.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: neuraminidase-like domain-containing protein
translation: MNINDSLKQIKLSSLNEVAEMPFNDFLEKAEFYQLDWQDTQVLYDTAIENQNRLRKTLTRANPEINIGRIISEYKPPTEKPTYDSSFLSLQHGYAVPGTAASMFSAPAYLYKLYHEARALHAHSSDYHLDKRRPDLKTLELSQENMDQEVSTLTLSNDILLQKLIEKREQDPSADGNKGDIYEYFSTKSDFHYAKEIIYQVLHAREINVKRLMEEMPLAKEIDQDILLCTELTLTPLRLNSVKKDIKKIASYYKERGLSAKIMDPILGSSTLPGSLILEKLNKIARIKKYQDRYNIPEEQAFILENNSILTTRSQHDPRSPSQFDQLFNSPPLKGVRYELTGVERCTDDALEAEEAAVLRQALAVDKRGLSIMREMLTSDTTVSQITYLSALYRIRLLARVHGLTVSELAILLKMLGNLSENPITFSIEMSDDRCAALMEKLYQLTYWLREQGWRVNELYDMTTTEYNGEKTPEIEALINTIAMGLDWVPAQAEPETAIQVSEQIAPFIASSLELSSETVACCLLNWLDKLIPQTAPDDLIINVNTFRDEIIKWNQDHREINEKVIIFCQRLQQLAFIYRRLQLSEAELSLFVEQPHCLDRSLTLIKNNITDLQLLTRVHRQITSFGDHASQVLMALKQRNLTADKLTDRLALTMQTDIETLQQAANLADYTDSSPFIDILSIIGTVQWLNTAQWLNIDTNTLRQLIDLNALSTYQDWQAVATALLTGLNKQQAEKVNIQLDEGLSTALSEHSINFYSVVDEPRLNTLTTRDYLYQYLLIDNQISAEVKTSKIAAAIAALQLYINRTLQRQEKAGLNTDILNKPFFQNWESINCRYSTWAATAKLRYQPENYIDPLQRLGQSQMMDNFQQAISETQLNNEVIEQAFKAYLTEFEQIANLSIISAYHDNVNSNEGLTYFVGENPDEKGIYYWRHVDQKQFSKGKFFIGAWGQWKKIDCAVNSMDQLIRPVVYQSRLYLVWIEKRQETEIDQDDDKKSNSVNKYKLNVAHHRYDGNWSSSIEFPIEFSQSGPGEKAEELFFNDKAKVGIYCAEDIKNKKIAILFYKKGEKNIKQGFFISDEMVCDKIENSALQIHFDSIKNQLDTDNTIKVNKCYSSPYHYAAEINGQENTVNHNGFSLIVKNSLPSIKIGQIHETLKIFFRVGVSVAYQGGDPHQTELMKLLSPHGGEFALSTLNDQVTDRPMIKVVISLDKMKIGIYHYFHASDVKIEFYRQVTEKVEHLEVTTQKIIFRPVMLKALYSIYDVNEFMLDPHFAIDVEGTPENKINFLTQSFSYFVREGDEKDTHLNLVQKMIRIDTRIHGIKTSFNDKKENNAVSFNEKNNRYQTDEISIGVAAITSDTAIQVPFEVKIGTTPYTQNLTIPITYRAVGDNKIFDLHKDVNGVQYMKYSGHRVHLNTRFAKKLTSLANRSIDAVLNLDTQKQEDISGQERIEFRGANALYFWELFYYLPMMVMQRLLQEQHFSQASRWLKYVYHPAGYIKAPARHIGRNSKTEYWNVLPLQDANDGRVNNLENSGGTDPDAIAQADPLHYRIATFMRYLDLLLKRGDHAYRQLERDTLVEAQMWYMQALDVLGEEPEPNMVIWQNPTLDPSTRPAQQAERSAPSLSMTTSEIRYPFYPQENIKLRSYWPIFKRRLYNLRHNLTIDGIPLPLPLYTNPLEPSVLRGALFSSPQDVSSIPTQDIEPRMLQRFPQMLNHARGMVSQLMQFGATLLNVIERKDAEALNALLQTQAKALMVTSIQLQDKTQAELQEELTALNSRLTGTRVRFEHYHNLYERNITQGEQSAMDLRTGSSSATMAAQTLHMTAAGLAMAPNIFGLSNGGMRWGALATGMAQKAEMVASGLMTAADRTSQFEMYRRRREEWDIQRESARLEIDQLTAQINGLNIRIQAADMQKKYLEMQQAHIQDQLSLLQSKFSNQKLYSWLRGQLMTIYQGFYDQTLSRCHMAERAWLWETGKDSHKFIKAGVWQDTYAGLLSGEKL…
SIO_010081: CCS41_RS02055
subclass of: SO_0000673
so part of: CCS41_RS02055
location: complement(431430..437501)
location: region:431430-437501:-1
so has part: feature:431430-437501:-1:exon

WP_119797113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431430-437501:-1:exon

CCS41_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02060
old locus tag: CCS41_02045
so part of: sequence
location: complement(437613..444401)
location: region:437613-444401:-1
so has part: feature:437613-444401:-1:exon
subclass of: SO_0000010

position:437613:-1
position: 437613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444401:-1
position: 444401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437613-444401:-1:exon

CCS41_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02060
old locus tag: CCS41_02045
inference: COORDINATES: protein motif:HMM:NF036757.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: neuraminidase-like domain-containing protein
translation: MSISESLAKLKFYSLNEVAQISFNDFLEKTKFYSLEEKNAQVLYNTALEEQSQQRNALTRANPMLKNIPNIIYTDVSPQHEYNENFTTIKHDYAVADTPASMFSVFAYLAELYREAYGLHAKHSPYHLDKRRADLKTLALSQDNRDQEVSTLTLSNDILLQYVKEKMKEKGSTLDRKNKNDIYRFLYERKIYTNGNVNLNYYFNYHYEVIEWALKAQGTTVSRLLDNPFFAKRMIKSHLNPLLQAKNDFLFYQIVTTPKKTKYYYKLTGLSSEIIDAIIDPVSQHEQSDFEKVEKITRIKNYQARYHIPEEQAFILDNNTILITKNNNHQSPSQFDQLFNSPPLKGVRYELTGAQKRTHAPLEAQESAVLRQALAVDERELSIMCEMLTDAVVSQITYLSALYRIRLLARIHGLTISELAMLLRMLVNPSKSLTLFPIDMSDDQCAELIDKLYQRTYWLCEQGWRVDELYDMTTTEYNGVKTLEIETLIQTVAMGLSSALAQENPETTIQVSEQIAPFFLSSLALPSITVANFLLAWLDKLIPHANPSSLIINVNTFRNEIIKWNRDHLEINEKMIIFCQRLQQLAHIYHRLQLSEPELSLLVEQPHLLDASLTLIGHSIAHLELLTRIHSQIISLGDQVPQVLIALKQRNLTAAILAPMIQMDKETLQQAAKQVDIQRAERAEREVSLLDQTLGAVESTKTEAKKLAADLRKIADSHEDMRFSDFSSITNTLEWLTMAQELGIKTDDLRKLLRLSNVAYFADYPDWQAVSTALLAGQDAQQSRKIALELDKIVSRGLSHYYVASHGSQTTPPVITRDQVYQHLLIDNQVSTEVKTSKIAAAIAALQLYISRVLQRKEEEGLNTDVLNKPFFQNWENGNGRYSTWAAAAKLRYQPENYIDPLQRLEQSQMMDNFQQAISDAQLNNEMIEQAFKAYLTEFEQIANLSIISAYHDSVRSNEGLTYFVGENPNEKGAYYWRRIDQKQFSQGKFFVGAWSQWKKIDCAANPVAKLIRPVIYQSRLYLVWIEDQWEMAADNTDIRKQIKINKQKLKIAYLNYNGNWSSTFSFNILEEKRIKNLGLSCTEDNEKNIIAVYLYEKQDSHYSLTPEHTVGYAISENMICHVMSHESLIEYFPHVKNEFDVLNQKNKKVSYPYPGLYNYSITDNQDELISGRLKLSNDIGIIDSIESERNLFVTCESHKKNYLKLFIKPRLQFAHNYFSGYEESQHTLIGLMEKMGEVGHDNYIFYKIENKKKHQSGTKITLVICPNKCTVGIFNPYSSPDPTKNIKLYFYGRENPLFEPIIIKRGKNIFHISEFKYQSERPIQFQTPQNDIMKFNECVEIKLAEENIEFDNIFFETNFIKSSKEIKPTITDFFISMGNHHKEKTDNFFSELDSDRIVFESDEIEYIIENALFSSDIFTTTISMNFHKGAVITTKEWAIKIKRTHKADTSRLKINNDAGIQYLILNEAYREPLNTKFAKKLVSLSTRGIDAILNLETQKQEEISSKAQRDFHGANAIYFWELFYYVPMMVMKRLLQEQHFSQASRWLKYVYNPAGYAEAPTDTGALRRWNVLPLHVDEKKNNLESSGGRDPDAIAQAEPIHYRIATLMLYLDLLLERGDHAYRQLERDSLVEAKMWYMQALDLLGEKPVLKAFIWNEETTLKQASLVTDTEEDYSLPQGASLTVIPGEQLFLPEENTKFRRYWRIFEHRLYNLRHNLTLDGAQLSLPFYATPPDPRTLHSASLSSLQGIVSLPTQSVERPMLQRFPQMLDHAREMVLQLMQFGSTLLNVIERKDAEALNELLQTQALALMTTSIQLQDKTREELQQDLTALNLSVAGATARYKHYDELYEENINPGEQSVMDLSADASSVMTVAQGFNTTAAVLDMAPNLFGASNGGCKWDGLARGMVLSAEIVAARLRVAADKTSQFEMYCRRREEWDLQRKSAQSEIDQLTAQINGTEIRIQSADKQKEYLEAQQKQIQEQLLFLQSKFSNQKLYHW…
SIO_010081: CCS41_RS02060
subclass of: SO_0000673
so part of: CCS41_RS02060
location: complement(437613..444401)
location: region:437613-444401:-1
so has part: feature:437613-444401:-1:exon

WP_119797114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437613-444401:-1:exon

CCS41_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02065
old locus tag: CCS41_02050
so part of: sequence
location: 444776..445537
location: region:444776-445537:1
so has part: feature:444776-445537:1:exon
subclass of: SO_0000010

position:444776:1
position: 444776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445537:1
position: 445537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444776-445537:1:exon

CCS41_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02065
old locus tag: CCS41_02050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNVENKILERHSYEFKKEFLSLFRTYHEVTYTCIDTVNRCVHALPSNYIWHLQYWDSDLDRHLNERLKHTMSYWGAYSSEHGNTLKKLENGIKKIDMTCYDKGRFELFSVSFRTDMLLPDLFYLNKVKSAISHYATRKIRGIDGDNIALPLRAHIDSPLAHQTAGRDINYKKFKFGDISLSELELETIRYLLELKSIKEIAWLHCCSATAEKNRIIRIKEKIGCANMPLSRVFTTLKKYGIIAACLGTYIISY
SIO_010081: CCS41_RS02065
subclass of: SO_0000673
so part of: CCS41_RS02065
location: 444776..445537
location: region:444776-445537:1
so has part: feature:444776-445537:1:exon

WP_072550806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444776-445537:1:exon

CCS41_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02070
old locus tag: CCS41_02055
so part of: sequence
location: 445725..446927
location: region:445725-446927:1
so has part: feature:445725-446927:1:exon
subclass of: SO_0000010

position:445725:1
position: 445725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446927:1
position: 446927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445725-446927:1:exon

CCS41_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02070
old locus tag: CCS41_02055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004393623.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MLTWKQRLGVVAGNACEFYDIALFAAISGYITVEFQQAGMGNSTYIVWGIFALRFLIRPLGGYIIGLYADHYGRKAALILTSTVIGLSTLTMAVLPISKLGAAAPLLFLILQMLQAFSFGGEYPTIIHYLLSESEQKQRAKISSMIVASSLVGVLMSLLIVYFINNLLSPEEMQQIGWRIPLLIALVNIAISFYFRQKLKEISPCVIKNQGITLLAVLKIFLIVIPGAVVFYVQNLASTLSKRALDNGTLQTLYPLLSSSLLLVFVLFIGWLTDKYSTPQKIFRLGIYALLIAAAPLYLLLASKSVVLVIIAQLALTLIAALILSNLAAVLFEKSANKTAILGLGYNAALSVFGGLSPLIIALLIPFGGLFPGIYVAASGVAFVVAGYIPAIRKSTCCTK
SIO_010081: CCS41_RS02070
subclass of: SO_0000673
so part of: CCS41_RS02070
location: 445725..446927
location: region:445725-446927:1
so has part: feature:445725-446927:1:exon

WP_119797115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445725-446927:1:exon

CCS41_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02075
old locus tag: CCS41_02060
so part of: sequence
location: 447235..448914
location: region:447235-448914:1
so has part: feature:447235-448914:1:exon
subclass of: SO_0000010

position:447235:1
position: 447235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448914:1
position: 448914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447235-448914:1:exon

CCS41_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02075
old locus tag: CCS41_02060
inference: COORDINATES: protein motif:HMM:NF024321.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcdA/TcdB catalytic glycosyltransferase domain-containing protein
translation: MPNLELAKEIDNFLSQNFFILTKPDENELIAALVEYTVMSKREVLPKYEMEALSRILYWAVKCNYYPFYKSKLLNIIKQHIAVLSETVPPKIHFMSLIGFEAIQLDYINLWIQENAENNTINIWTDSTTLLAEELSTRIEEVAVRHARNGKYTSKQAFRSELIMWQNKACNSIINTMLHNDPAQDGNKKFCFDQAVIIFLEEEGLAKPGELAEIRQTHTERFNSAIQQLKQTTRHPDNVTFIDFHSLNYLPGYFLYLKELVLRGNPVTALDVSRLLILKDQGGLYLDTDLLPCLNEIIFSRLIATHSSNTAHQYSPEVIMQVVLDELTHRGSMPGRAAVIKNTNRGDYPNPLQIIDESARQYIKNVVISALDSGQSLFSPLGRLAVDPYFACSYSGDNNKAIVAAKGSEFIDQILIYIAQIHKVMRRHNIDGLDPDQPIPREINRKIAEDLQTNKLFPDSRSLFAYREGGPYSADIPNRLAPYRHAYTLLMKEAGVVADNRIQPSLHKTIPPFRRAFFSTEEAYLSRLRERGEGFPVICFAKIANTTVSILYNCRMMRR
SIO_010081: CCS41_RS02075
subclass of: SO_0000673
so part of: CCS41_RS02075
location: 447235..448914
location: region:447235-448914:1
so has part: feature:447235-448914:1:exon

WP_162859956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447235-448914:1:exon

CCS41_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02080
old locus tag: CCS41_02065
so part of: sequence
location: 448920..450608
location: region:448920-450608:1
so has part: feature:448920-450608:1:exon
subclass of: SO_0000010

position:448920:1
position: 448920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450608:1
position: 450608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448920-450608:1:exon

CCS41_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02080
old locus tag: CCS41_02065
inference: COORDINATES: protein motif:HMM:NF023141.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARFLYNKNADRTAHYCYQAQTNTLAIVNAAPDFVFHGKTRIIFISHGIFMKAMGGEKIVQLLITRGLLQKDTTGDFQKIDRVSIAACYINEATPANVVMNRPIQDENFIENIYRAFSIEKISVGSISVREKLVLIDALGRTWTGLIKNPQIPEEQWQVDWTLVKESNRKIIFTQGEDGEIVKTRIGLLKEASARTRLLKTSYNGRFGVDDVFDGYQTKLSGAINVKIARQIVENIKKGPVLMVADIMALIAGMCEEVAPHRIIINANRPDMTALQHILRQTEQYHDYIHWLNELDLWGGTKELKLLMEKLFTQPQTAFLRLKERYLHDDFDLFSLNLSDPASAGIIERDKRDKAPIRSIYLGQVEQHFGETIKESLAYNDDPETSLKKMKTSIDNIEQNLKKLSKGEGNTSLYYHSELTRQSEQATINNSKLKRKYTSPRYLIKAQVYYANTLSAHSYRMVIDHCDALVSANRNLLTQNHLETNKWGCLLSTLTYNKEIQQYEMYYLHQDKMQKIQLTTDNTIFAEMRRYLEQQHERLIKCYQRVNGRLYPNPFFSTTVIL
SIO_010081: CCS41_RS02080
subclass of: SO_0000673
so part of: CCS41_RS02080
location: 448920..450608
location: region:448920-450608:1
so has part: feature:448920-450608:1:exon

WP_240313802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448920-450608:1:exon

CCS41_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02085
old locus tag: CCS41_02070
so part of: sequence
location: complement(450719..451075)
location: region:450719-451075:-1
so has part: feature:450719-451075:-1:exon
subclass of: SO_0000010

position:450719:-1
position: 450719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451075:-1
position: 451075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450719-451075:-1:exon

CCS41_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02085
old locus tag: CCS41_02070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVTIKGKPVSRHENNSPTRVPHFLQLAQVGTKFSTHLQGDKRNNTLSTTPLPGDEENNRLWHQHGKDTLKGKGGQTGIISRLAPVMSRLITKIMAAKTADTSPKMSCYCRGRSKTCG
SIO_010081: CCS41_RS02085
subclass of: SO_0000673
so part of: CCS41_RS02085
location: complement(450719..451075)
location: region:450719-451075:-1
so has part: feature:450719-451075:-1:exon

WP_119797118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450719-451075:-1:exon

CCS41_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02090
old locus tag: CCS41_02075
so part of: sequence
location: complement(451072..452718)
location: region:451072-452718:-1
so has part: feature:451072-452718:-1:exon
subclass of: SO_0000010

position:451072:-1
position: 451072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452718:-1
position: 452718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451072-452718:-1:exon

CCS41_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02090
old locus tag: CCS41_02075
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKDGRADFVSFTRDVSRDSSGLGHVNISYGKPVKADDALAAAAGIFEPAQSMALSTLYPASVPASVAAYLHRVVGDIDGDGDDDIVSITKTGDLYTLLSSGNRQMPFIAKAVQHHDGIKQLFTPEKFNNAQIQLHDMNGDHRADLVVIQDDGSYTIAEGQADGTFGPAKAASRQNRFAPRGASQIVNIIDENGEKFLVSLRPTGEAVRAPFRRPSEADSINKVNMGEGNDRVLGRRDRKNDFDIGGGTKQFTGGSQADSFRLLGQAAPTTPHVLDGGQGAGSDRDQGDTVIASRQPMNGKSTLLALDIGLAAYYREGQRQDVIDRLARIAQLTGQAREEAITQLNALAHVKTLARLSHIEHAYGQSDVSVLLTGDAGNNTLGLGRGYAAGGKGTDSYHILRNQSATRAQITLKEQVEPQAHSNVLLDYDAEDIASIRLAGEEVWLQLRGDNGAHTELRLENMYRLHADGQQKSLQHAYVLHTRDGLRITGWPQTLRRAADGHWPSLTPLTAHYIPEHDQSRQAFLRAARPEDIQVEFITPAVRVKNK
SIO_010081: CCS41_RS02090
subclass of: SO_0000673
so part of: CCS41_RS02090
location: complement(451072..452718)
location: region:451072-452718:-1
so has part: feature:451072-452718:-1:exon

WP_162859957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451072-452718:-1:exon

CCS41_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02095
old locus tag: CCS41_02080
so part of: sequence
location: complement(452649..453683)
location: region:452649-453683:-1
so has part: feature:452649-453683:-1:exon
subclass of: SO_0000010

position:452649:-1
position: 452649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453683:-1
position: 453683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452649-453683:-1:exon

CCS41_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02095
old locus tag: CCS41_02080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: VCBS repeat-containing protein
translation: MDEIKKIVKLDGWETFQAGVLAFTGQDQTPEVENQVTAYQLKEEAEEALTARLEQAAKTVLRANINIETLYLSRGVVKLNPLPYRRIVATDIAKGEHIIRDRIPPTAIPSSDAMQQEAASYAMRYSRGNRVLTFQQSEGKAVVRLEEYSLNYYLPYAEGVDEVVDLNDEDARLPATVLKKPFIGADQPVGSFVATADHPLPTVSLNPLQNDTRAISIDIDHDGHRELAFYSIDGFYFLKSDGKGGYGTQQRIDSIVPLIWPTIRTTVGDINGDGWDDMVAVGDSSDPVQIFLAHKNGAFARREQSNGLQRSFLSDAPRCYWTWIKTAGRILCHLHETLAATAAG
SIO_010081: CCS41_RS02095
subclass of: SO_0000673
so part of: CCS41_RS02095
location: complement(452649..453683)
location: region:452649-453683:-1
so has part: feature:452649-453683:-1:exon

WP_205411451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452649-453683:-1:exon

CCS41_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02100
old locus tag: CCS41_02085
so part of: sequence
location: complement(453755..455851)
location: region:453755-455851:-1
so has part: feature:453755-455851:-1:exon
subclass of: SO_0000010

position:453755:-1
position: 453755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455851:-1
position: 455851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453755-455851:-1:exon

CCS41_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02100
old locus tag: CCS41_02085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGQIIITDLDEDGYAPEYRIDVGTDYVAQLAPAAEGRMNVTDLIAQPRISMPTGLPGGNSAYADPLSSIPLPSPVVDRTDLTTRLQRVIALMEALHANTLTLDTLDAQQRLDLADFFPDADGAFDERKISAFTTDARHFSRWHNDVKQLLQLPDTHAQLAHLTGEHALARSQEWNRQQISAITAWKGVEAEQGVNVQLAPQALFIEDNSRYAQAAATATGLAWLDAQTQGGQASEHYLKGLNTYATLNELRAQDPLSDNDVKQVQQFRRLFEGLLATPDAHPSIFGRQPLPVTHADMTPGQYLLKIDQQILALSVKENGHFTLYHPNVGAMHITGADVSQNRRVLETTLRHHMAPSTAVTLYKVDLTAARAQFSGLRQLQTLLGEYKPEAQRLAAAPDITLSAVPIAVVVLDKMGARIDGKPFSVDHLQRLSPQQVAEQLRFDAQKLARYLHQADYSTVEAQQAVRFLRQQIPAEGSMENRLIDSGNPAAKASVLAQLDAIRQQVTFRPQPTAGSQATKLVLDIAPTLGDTLKSVPIAGRARLQRFTSRAGGTMQGYGYLRSLSDLTKYNRRLQNQSLPPAQREQLTRERDMALFALSSNMAIDLTQEGLGIWGSRLTQMGLQSGFKLQLARFGGPALGVLSSGFDFYQAFRAFSQLATTTDPTLRQDLIVEGSLSLTGALVSIGVPLLLRLAAPPPR
SIO_010081: CCS41_RS02100
subclass of: SO_0000673
so part of: CCS41_RS02100
location: complement(453755..455851)
location: region:453755-455851:-1
so has part: feature:453755-455851:-1:exon

WP_119797121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453755-455851:-1:exon

CCS41_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02105
old locus tag: CCS41_02090
so part of: sequence
location: complement(455908..458748)
location: region:455908-458748:-1
so has part: feature:455908-458748:-1:exon
subclass of: SO_0000010

position:455908:-1
position: 455908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458748:-1
position: 458748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455908-458748:-1:exon

CCS41_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02105
old locus tag: CCS41_02090
inference: COORDINATES: protein motif:HMM:NF023141.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C80 family cysteine peptidase
translation: MPHTSMSRYEATNTAPTLVTTPVSSTPISGSAATQSNSLSGAPGPAKRDNVAGWQRRDISALSRDERSKFDSILIIQLEDNEQSLRDAINLASKHPKKSVLLQLDAEGNSRLIHGDLMRLTGYSRWHFVGRSRGGEDDHNPTSLAGYDASGLLSVKKQVSQILGGAEPNEIVLIGSALASDDENPEFVDYRTQFADLLNQTNTGEPRTEPVGVVAYTTTVDVDEQGRRLTLDDDDQFKPGLIENRVVSRAAPKGLTSVQWMQLIRWMQEKYRNRVQNQPGNEGRYMSSASAEAYLKLYNFPPETRLRDYDMLLGNPDFFIFNGRLIEPGPVESHGHHSITQIDAQALARSNRESAKQEQPVNNEDIKKKWLIFPKKEQQAIAVLQSLHPDKNNIEIDVLWKSFNMSGELRQQLVDHLITENTVPEWAEAHKSASMDSNNTHRFDHIRSVVDPMIARFLRSDDQTMSMGSETRQAHYYAPAFLNDYLRSRGYQINDRGYPFRRDISGVFRGTHITPYEIVADERLLPFHGSHPDRTVTEIVMCGSALYRVSQENYTSGKSANISQYHYDRQSDPTYREFSDSDSDDEDYDHPIASKRIHKEYSRPLRRGQTSGFIYWIDTRGLEVVSMVESYILDPKAVADGGGGDAELHISAPFDKGIPADRIWLIDTEGNRALNIADLGEHFHNDLVDLEEETLQGASRIRYDRLFGRAEAKGLRILDISSMTSALPTQNNYNYDYQYYSPGALNSAKERTAPRPKNIPGSSLESRVVVDPVSRPVDTVEPMEFGKRVGPTMDSGEPMEVDESVDTPRDSGEPMEVDESASVPGDDVEPMDTDENVSSPRNSVEPSHHVYEIAVVQQGDADAIRAVGQWLRKDPMHRYLVVMNGEQADISSPNGTAFPMEASAQAWLTLNTSPRTYKYSLSVKKKGRHPPTYCGMINHCLTPEKE
SIO_010081: CCS41_RS02105
subclass of: SO_0000673
so part of: CCS41_RS02105
location: complement(455908..458748)
location: region:455908-458748:-1
so has part: feature:455908-458748:-1:exon

WP_119797122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455908-458748:-1:exon

CCS41_RS16265
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16265
so part of: sequence
location: 459292..459462
location: region:459292-459462:1
so has part: feature:459292-459462:1:exon
subclass of: SO_0000010

position:459292:1
position: 459292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459462:1
position: 459462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459292-459462:1:exon

CCS41_RS16265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEVEGAKISLTPMHRIPRGRKNIQELLNEIDSNEIFSLNETVANFTVTPPTGKEFW
SIO_010081: CCS41_RS16265
subclass of: SO_0000673
so part of: CCS41_RS16265
location: 459292..459462
location: region:459292-459462:1
so has part: feature:459292-459462:1:exon

WP_240313803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459292-459462:1:exon

CCS41_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02115
old locus tag: CCS41_02100
so part of: sequence
location: complement(459921..460916)
location: region:459921-460916:-1
so has part: feature:459921-460916:-1:exon
subclass of: SO_0000010

position:459921:-1
position: 459921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460916:-1
position: 460916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459921-460916:-1:exon

CCS41_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02115
old locus tag: CCS41_02100
inference: COORDINATES: protein motif:HMM:NF018475.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDIVFSVGTGYFPTTVRIEEILNDDRHIYMTLWEKIKEFFFFHGHKEAQECLKKLCHPVHNITLDEVEKILFKLKELASPAYKERFCYDFGSTDNLLQMKDNRGNDIFSININKNDKIFSYTILDKEFFFYDPTIEFRDLVDDFRTRPALSNGLSIATKGTKLSIAYKDGNSLRLDFGTIYKDIMKMIREINPGEYYKQWLEQEKCTYLCALINLQIDRAFMGHKQLTKNERLSLFKETMHYLNKSDMTIDIACAQGSIKHLVSTYLMKNTLFTDFLKRINDCDQKSEVNTKISYALSDLMYESIFKENIISSVRKTAAHVANEYIQRAA
SIO_010081: CCS41_RS02115
subclass of: SO_0000673
so part of: CCS41_RS02115
location: complement(459921..460916)
location: region:459921-460916:-1
so has part: feature:459921-460916:-1:exon

WP_119797123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459921-460916:-1:exon

CCS41_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02120
old locus tag: CCS41_02105
so part of: sequence
location: complement(461034..462887)
location: region:461034-462887:-1
so has part: feature:461034-462887:-1:exon
subclass of: SO_0000010

position:461034:-1
position: 461034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462887:-1
position: 462887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461034-462887:-1:exon

CCS41_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02120
old locus tag: CCS41_02105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTTNSYFQSHVPTNRSSGNTSTERTKSVKDIIVETGNTLRLPTSTKTKFCGMKKRVIKAIRRMTNTKVKQDPFDEIHSGIDIDTLRRQSTEVSSALKELDPVTAEQQLINDVVKMYTESVVEKYQGNKEIKLKNDISSISELCVQLNDKVNKVDNENKSTFLPLFIAFTKEIAGRTINYLGRMSGFPYHLYLQENTKQVEEAKQMSENKRLLADCLKGYINNDRHLKCFKDTLKKEEIKKYAVIELKDETNVVFRIFPKNNREICKLLNILSQHHRADKTWAKDLAKFLQKSELAAFMKIKPLENNGQLQLVFLEDGLSLTSVNDNIEKLTLLTQFVGNKVPYSINVLTHFNKPNNDADKLQNAQQVYYRMTQAFANGMTKDYLKESGLGNKNNTIQYTVKTRNSIDKALEDIEQASNSKFSFKKDKYGKVKTRLENIRAIADNWETLKYNIASNNTVESIDNTLRDAIVEDIKQLDRELTSINLNKFTQKIKQVSIGIGVATVASLFLTPYLAISLFITGTAFGLIYLIAKYKPETVPSDINEILSKNIKELSNKKTDAKFKSQAVPWAAAFKFWLTGILPAVVVKKRNDETTSPITEKLSTFHEEYNNHSKAYI
SIO_010081: CCS41_RS02120
subclass of: SO_0000673
so part of: CCS41_RS02120
location: complement(461034..462887)
location: region:461034-462887:-1
so has part: feature:461034-462887:-1:exon

WP_119797124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461034-462887:-1:exon

CCS41_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02125
old locus tag: CCS41_02110
so part of: sequence
location: complement(463441..464547)
location: region:463441-464547:-1
so has part: feature:463441-464547:-1:exon
subclass of: SO_0000010

position:463441:-1
position: 463441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464547:-1
position: 464547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463441-464547:-1:exon

CCS41_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02125
old locus tag: CCS41_02110
inference: COORDINATES: protein motif:HMM:NF022500.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLTIQGNTCLPFSRAISDKRIRRAVESSSKEEAAYMGVWDKIKDWICRTKKSEALEKLYELTHTDHEPDTESALKTMISFYQLKEMTYPGFQNRFQASVTENEDGTYTFTFSIKDGMDERKLVYGNSEKDIRAFSEKQLTNHSEFLNINPVSRESVDAALAKVAYNTDPDKLEGISSSNQKRLYLHLLSGPTKQEMVFDQRLTQRWIALQMKCFDYYALQRFSLDSTEGIDLGKTIGTESEWIYDFAKSIDSITKNIQKSLAEKFNNETNNLYDPIYADPMYAKVTDLNLDYSERTDNTFQAMTSNASELPVIKHYKGPVNGDIYATVGKKKSDKSELLRSIENYILENPKEFPSAYKYFKEGYIAG
SIO_010081: CCS41_RS02125
subclass of: SO_0000673
so part of: CCS41_RS02125
location: complement(463441..464547)
location: region:463441-464547:-1
so has part: feature:463441-464547:-1:exon

WP_119797125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463441-464547:-1:exon

CCS41_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02130
old locus tag: CCS41_02115
so part of: sequence
location: 464875..465180
location: region:464875-465180:1
so has part: feature:464875-465180:1:exon
subclass of: SO_0000010

position:464875:1
position: 464875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465180:1
position: 465180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464875-465180:1:exon

CCS41_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02130
old locus tag: CCS41_02115
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MKSKKKPSTLTLEFKQDAAKLVLEKAYTCQQAADSLGVSLSAIKSWVKAERGGVSPVGSEQASLSLAEREELLRLRKERNNLLIEREILKKAAVFFAKENG
SIO_010081: CCS41_RS02130
subclass of: SO_0000673
so part of: CCS41_RS02130
location: 464875..465180
location: region:464875-465180:1
so has part: feature:464875-465180:1:exon

WP_119797126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464875-465180:1:exon

CCS41_RS16270
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16270
pseudo: true
so part of: sequence
location: <465189..>465314
location: region:465189-465314:1
so has part: feature:465189-465314:1:exon
subclass of: SO_0000010

position:465189:1
position: 465189
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:465314:1
position: 465314
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465189-465314:1:exon

CCS41_RS16270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_196249857.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: CCS41_RS16270
subclass of: SO_0000673
so part of: CCS41_RS16270
location: <465189..>465314
location: region:465189-465314:1
so has part: feature:465189-465314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465189-465314:1:exon

CCS41_RS15905
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15905
so part of: sequence
location: complement(465260..465397)
location: region:465260-465397:-1
so has part: feature:465260-465397:-1:exon
subclass of: SO_0000010

position:465260:-1
position: 465260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465397:-1
position: 465397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465260-465397:-1:exon

CCS41_RS15905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADIKIWEINEDTPSSGYDFSVKITLTLIWREYKSITTAKYIQPS
SIO_010081: CCS41_RS15905
subclass of: SO_0000673
so part of: CCS41_RS15905
location: complement(465260..465397)
location: region:465260-465397:-1
so has part: feature:465260-465397:-1:exon

WP_205411452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465260-465397:-1:exon

CCS41_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02135
old locus tag: CCS41_02120
so part of: sequence
location: complement(465701..466054)
location: region:465701-466054:-1
so has part: feature:465701-466054:-1:exon
subclass of: SO_0000010

position:465701:-1
position: 465701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466054:-1
position: 466054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465701-466054:-1:exon

CCS41_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02135
old locus tag: CCS41_02120
inference: COORDINATES: protein motif:HMM:NF013676.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MGSRPELQGLIRKIYHGVFKGKKRITNQVSAHAVRLVANSVIAYNAIILNTLYEKMQVVEGVSQTIIDEFVRISPIAWAHIAFTGKYHFKKSKSGVDLDTMINELEKHLKRCFWKAA
SIO_010081: CCS41_RS02135
subclass of: SO_0000673
so part of: CCS41_RS02135
location: complement(465701..466054)
location: region:465701-466054:-1
so has part: feature:465701-466054:-1:exon

WP_205411453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465701-466054:-1:exon

CCS41_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02140
old locus tag: CCS41_02125
pseudo: true
so part of: sequence
location: 466119..>466628
location: region:466119-466628:1
so has part: feature:466119-466628:1:exon
subclass of: SO_0000010

position:466119:1
position: 466119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466628:1
position: 466628
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466119-466628:1:exon

CCS41_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02140
old locus tag: CCS41_02125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011147937.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISAs1 family transposase
SIO_010081: CCS41_RS02140
subclass of: SO_0000673
so part of: CCS41_RS02140
location: 466119..>466628
location: region:466119-466628:1
so has part: feature:466119-466628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466119-466628:1:exon

CCS41_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02145
old locus tag: CCS41_02130
so part of: sequence
location: complement(466650..467473)
location: region:466650-467473:-1
so has part: feature:466650-467473:-1:exon
subclass of: SO_0000010

position:466650:-1
position: 466650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467473:-1
position: 467473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466650-467473:-1:exon

CCS41_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02145
old locus tag: CCS41_02130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041621276.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKYEQIKVLEEEKFRRLTGVKRSTFEKMIKILNEADKCKQGKGGRKPKLGLEDRLLMALEYLREYRTYFHVSRSDGVSESTCYETIKWIENTLIKHPDFALPGRKALLKSDREYELVLIDATETPIERPKKKQKQFYSGKKKRPTLKTQVIVDKKSKAVICTSFTHGRRHDFRLFKESGVRIHPEIKTVTDTGYQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRELSSQRVLNENVLGMIKRFKIVSDRYRNRRKRFGLRFNLIAAIYNMEIR
SIO_010081: CCS41_RS02145
subclass of: SO_0000673
so part of: CCS41_RS02145
location: complement(join(466650..467086,467086..467473))
location: region:466650-467473:-1
so has part: feature:467086-467473:-1:exon
so has part: feature:466650-467086:-1:exon

WP_240313804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467086-467473:-1:exon

position:467086:-1
position: 467086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466650-467086:-1:exon

CCS41_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02150
old locus tag: CCS41_02135
pseudo: true
so part of: sequence
location: <467643..468194
location: region:467643-468194:1
so has part: feature:467643-468194:1:exon
subclass of: SO_0000010

position:467643:1
position: 467643
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:468194:1
position: 468194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467643-468194:1:exon

CCS41_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02150
old locus tag: CCS41_02135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014611598.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISAs1 family transposase
SIO_010081: CCS41_RS02150
subclass of: SO_0000673
so part of: CCS41_RS02150
location: <467643..468194
location: region:467643-468194:1
so has part: feature:467643-468194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:467643-468194:1:exon

CCS41_RS16275
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16275
pseudo: true
so part of: sequence
location: complement(468424..468980)
location: region:468424-468980:-1
so has part: feature:468424-468980:-1:exon
subclass of: SO_0000010

position:468424:-1
position: 468424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468980:-1
position: 468980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468424-468980:-1:exon

CCS41_RS16275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16275
inference: COORDINATES: protein motif:HMM:NF013676.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: CCS41_RS16275
subclass of: SO_0000673
so part of: CCS41_RS16275
location: complement(468424..468980)
location: region:468424-468980:-1
so has part: feature:468424-468980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:468424-468980:-1:exon

CCS41_RS15925
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15925
so part of: sequence
location: complement(469966..470469)
location: region:469966-470469:-1
so has part: feature:469966-470469:-1:exon
subclass of: SO_0000010

position:469966:-1
position: 469966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470469:-1
position: 470469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469966-470469:-1:exon

CCS41_RS15925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15925
inference: COORDINATES: protein motif:HMM:NF025079.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4158 domain-containing protein
translation: MSQQKQIILSLFNYQDWSVKQAILIEEHLRELLRYYPKGHDTFRQLLVYLDNQKIVIPTYRCLQDMFTREFAKESDRLNQLIMLIPEIKQKQLSGLINRDEGISRLNTLRADQKNFTYTAINAEVEKALAMVELYKFAKDFLPTLLLSKNTIRYYADLCPFQTKAVK
SIO_010081: CCS41_RS15925
subclass of: SO_0000673
so part of: CCS41_RS15925
location: complement(469966..470469)
location: region:469966-470469:-1
so has part: feature:469966-470469:-1:exon

WP_275887686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469966-470469:-1:exon

CCS41_RS15930
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15930
so part of: sequence
location: complement(470521..470676)
location: region:470521-470676:-1
so has part: feature:470521-470676:-1:exon
subclass of: SO_0000010

position:470521:-1
position: 470521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470676:-1
position: 470676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470521-470676:-1:exon

CCS41_RS15930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQVELDKLSQFGTLKTKIYFILQLAYFKAKNQFFIFVFEDVLADVAYVLA
SIO_010081: CCS41_RS15930
subclass of: SO_0000673
so part of: CCS41_RS15930
location: complement(470521..470676)
location: region:470521-470676:-1
so has part: feature:470521-470676:-1:exon

WP_119963712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470521-470676:-1:exon

CCS41_RS17035
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS17035
old locus tag: CCS41_02145
so part of: sequence
location: complement(470701..470829)
location: region:470701-470829:-1
so has part: feature:470701-470829:-1:exon
subclass of: SO_0000010

position:470701:-1
position: 470701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470829:-1
position: 470829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470701-470829:-1:exon

CCS41_RS17035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS17035
old locus tag: CCS41_02145
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAWFEQHKRRLSEKITLYQQNWAVIKNAITTHIRALLAAPG
SIO_010081: CCS41_RS17035
subclass of: SO_0000673
so part of: CCS41_RS17035
location: complement(470701..470829)
location: region:470701-470829:-1
so has part: feature:470701-470829:-1:exon

WP_275887657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470701-470829:-1:exon

CCS41_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02165
old locus tag: CCS41_02150
so part of: sequence
location: 470944..471966
location: region:470944-471966:1
so has part: feature:470944-471966:1:exon
subclass of: SO_0000010

position:470944:1
position: 470944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471966:1
position: 471966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470944-471966:1:exon

CCS41_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02165
old locus tag: CCS41_02150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MKIELTADQKITLEAQHRQSHDRRVCDRIRCVLLSADGWTPPMIAHSQLINETTVRRHLTDYHKLNKLKPENGGSDGYLNAEQTTSLVEHLTQPLYHHNHQIVAYIAGRWNITFTVSGLYKGLKQHGFSYKKPKGVPHKFDVEKQPQFIKTYSELKDAAGNDPILFIDAVHPTQATKISYGWIRKGQDKTIETTGSRTRLNIMGALNIQNVANPIIRDDETINSENVVHFLSAIRAHYPITTTAHVILEGAGYHRSQLVQDAALTLNIQLHYLPPYSPNLNPIERLWKVMNEQTRKNRYYPSKQSFKNDILNFFEVKLPQMASSLVSRLNDNFQALNPAS
SIO_010081: CCS41_RS02165
subclass of: SO_0000673
so part of: CCS41_RS02165
location: 470944..471966
location: region:470944-471966:1
so has part: feature:470944-471966:1:exon

WP_119797129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470944-471966:1:exon

CCS41_RS15505
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15505
so part of: sequence
location: 472041..476012
location: region:472041-476012:1
so has part: feature:472041-476012:1:exon
subclass of: SO_0000010

position:472041:1
position: 472041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476012:1
position: 476012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472041-476012:1:exon

CCS41_RS15505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15505
inference: COORDINATES: protein motif:HMM:NF024939.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1983 domain-containing protein
translation: MVITGNKGGSQRPPTPTESPDSLHSTAKAKILLALGEGEFAGELDGTRIYLDGTPLNNADGSANFTGVTWDYRPGTPSQDYITGMPNVENEVTVNTELKADTPWVRAISNTQLSALRIRFSWPALQRQTDNGDVNGTRVEYEIEMATDGGAYHTVLKTTVEGKTSTGYQRSHRINLPDAKTGWQLRVRRLTPNSTSNRLADNMHIEALAEIIDAKLRYPNTALLYIEFDASQFQHIPVIACEPKMRTIRVPTTYDPATRTYKGTWDGTFKWAYSNNPAWVFYDILLADRFGLGHRLTAAQVDKWELYRIAQYCDQFVPDGKGGNGTEPRFLCDVYIQSQAEAFTVLRDLAAIFRGMTYWANNQLCALADMPRDRDYLYTRANVIDGRFSYSSSSEKSRYSTAMVSWSDPANSYQGTLEAVSDEALVRRYGINQLSTTAIGCVRQTEAHRRGRWALLTNAKDRLVTFDVGLDGAIPLPGHIIAVADEMLSGRKSGGRLRHAVGCDITLERPADVKPGDRLLVNLPSGTAQARTVHAVNGQLITVSVAYSETPQPEAIWSVEADDVALQHYRVTRIEDNNDNTYRINAVQHDPDKYERIDSGTRLDERPISVIPLTLQPPPTHITLTSHAVIAQGLAVTTLQVNWQAASGATAYDAQWRRDKGNWTPLLRVLTCGFEVPNSYAGCYQARVRAINATGSTSLWVTTPEIPLQGKENPPPQPVGLTTTPIVFGITLNWAFPAGAEDTLKTEVECSRFAHDAHQKPLIDIAYPQRHYTMQGLAAGRTFYFRARLVDRLGNQGAWTPWVQGASSDDAEMVLDHIRDDIMTTQAGKRLTSQLDTLIKTSQANERKQEHSRITLQKEVKDRVEETLLQVNERLERQDKTLQRYNQGLKSRFKISQLQTQDVQKTATHLDTAFITYKEEMDTQFDRANADVLAVRQAQSDTHQAFSLYRLDMTARFDKNDALITDIHTAHATATQALADYQNRIAARFGKNETAISQTQRAQTLATQALAEYQNMITARFRDNDAVIETKATTQFTSSGGNALYSIKAGIHHQGKYYDAGMVVGVETQGGSVKSQIGFNADNFILLSGQNGKKFSPFAVKNNQVFIREGFIQDATIDTAKIKEAAITNTKIGGPLQSTNWAAGRSGWKIEKAGHAEFNDATFRGTIYATDGWFKGTVSADKIEGDILDMSPNFFKTKKGSIPDSQSVIFPLFYIKKTASPRRVLLLGRKEKGIALSVSPDWVRATITRDGMDVQYLGKAGSGLLGEYVNAVNEDIDITLPAGEGEVLIGLRLQSTRGKLRMFNWTASGDIYTMKNAASIKIA
SIO_010081: CCS41_RS15505
subclass of: SO_0000673
so part of: CCS41_RS15505
location: 472041..476012
location: region:472041-476012:1
so has part: feature:472041-476012:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472041-476012:1:exon

CCS41_RS16280
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16280
pseudo: true
so part of: sequence
location: <476352..476565
location: region:476352-476565:1
so has part: feature:476352-476565:1:exon
subclass of: SO_0000010

position:476352:1
position: 476352
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:476565:1
position: 476565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476352-476565:1:exon

CCS41_RS16280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010929632.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: CCS41_RS16280
subclass of: SO_0000673
so part of: CCS41_RS16280
location: <476352..476565
location: region:476352-476565:1
so has part: feature:476352-476565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476352-476565:1:exon

CCS41_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02175
old locus tag: CCS41_02160
so part of: sequence
location: 476905..479061
location: region:476905-479061:1
so has part: feature:476905-479061:1:exon
subclass of: SO_0000010

position:476905:1
position: 476905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479061:1
position: 479061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476905-479061:1:exon

CCS41_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02175
old locus tag: CCS41_02160
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLVHPSPTIGLTLSQSNIRFNMTGNGGVKFELTSWDTLQDFFRRLYDMLRGTNSSPDNLQEQLNKLQTRLDNPHLEISHNPFKGVFDPFIDLKNLLPGKMQKEFSVIIDYNQTDLSAGNISVSIKYDNYLLKTIVVENAVRLNNDDIKEYIEEHFNVVTSEYNFSGNFPIENANTDLEGIRKRSEQYLEKSKEKHMSVPDQILQDHKNLRKDICQFLLRFRMDTNILIRSQSSLSRVEQTELENEIQVYLFQVEEDFSRKLDNILNVKEAIESGIPNKELIECIKEVNQIQISFFKEKLNNSIINEKDSDPIDKFVEVLSEKNRLYMCIDSTLLLEEIDKKTILSKIQNEIDSLAICIFKRNLFKFKPDKEDKEDKEEYMYSSILKLSDNLVAAFENKNLSEKTKNEMLNLAQQEILHICTIVDPSTIEEYRVLLDTLIKCRISIHKNMSLNDADKDKLKNIFNEEIKTTARKIFDEQSRISPRKDDDTIEDLVSWHIAFNEYIKSASCIIHDPRLEEGIKEILSSDIDEINAITLKFILSKVRDKLENAKAAEDYNALWKTYEKLFKYPAPIEITNKYLEIKGEILEHIFKPFQFLPIMEEKEATPKHIGWLDRYITMLGKNTIINYPNLGENIKHFIDIKKKEIVSDRWSSILNRIQNEVEKTSSIDDLNHLRKQCNDCIQFIENDSITRLIKKIEETIIGREIYLIFLKKLDKK
SIO_010081: CCS41_RS02175
subclass of: SO_0000673
so part of: CCS41_RS02175
location: 476905..479061
location: region:476905-479061:1
so has part: feature:476905-479061:1:exon

WP_119797130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476905-479061:1:exon

CCS41_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02180
old locus tag: CCS41_02165
so part of: sequence
location: complement(479997..480368)
location: region:479997-480368:-1
so has part: feature:479997-480368:-1:exon
subclass of: SO_0000010

position:479997:-1
position: 479997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480368:-1
position: 480368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479997-480368:-1:exon

CCS41_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02180
old locus tag: CCS41_02165
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKLKGLLLSITLLLFFTTKVQTQLLVMPTRTTVEALQTDQIIRVINKGDTPLYLTVTLERIENPGQDPERKTPIGRIQKPEMMFNPIRITLGAKQERNINLSPLTVPIQETLYRLYITPVIK
SIO_010081: CCS41_RS02180
subclass of: SO_0000673
so part of: CCS41_RS02180
location: complement(479997..480368)
location: region:479997-480368:-1
so has part: feature:479997-480368:-1:exon

WP_205411457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479997-480368:-1:exon

CCS41_RS16285
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16285
so part of: sequence
location: complement(480492..481283)
location: region:480492-481283:-1
so has part: feature:480492-481283:-1:exon
subclass of: SO_0000010

position:480492:-1
position: 480492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481283:-1
position: 481283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480492-481283:-1:exon

CCS41_RS16285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYLILVSLQQSIESSWQWMQPAFNTVFTVRAEKNGANYSLFANARLTFNHSDLSIDTLYRDKQVATHTQYQRQFNDNYGVTTLNVESETLERDYYFSSDIHRNGTRGNVGLRVALNNQVASSSFHYDSILAANTSGIALGRSNYSGVAMLVKVPRLAGTAYSFNVEGSPVANGGTYAVPISRYQDHAFVRTQSEGSLHDIAVQLPANIVQAHPGQVFSVAANVKLSLLYYGFFVDANRQPIEGIVQETGDIVYPNGMFSINI
SIO_010081: CCS41_RS16285
subclass of: SO_0000673
so part of: CCS41_RS16285
location: complement(480492..481283)
location: region:480492-481283:-1
so has part: feature:480492-481283:-1:exon

WP_240313805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480492-481283:-1:exon

CCS41_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02190
old locus tag: CCS41_02175
so part of: sequence
location: complement(481404..482672)
location: region:481404-482672:-1
so has part: feature:481404-482672:-1:exon
subclass of: SO_0000010

position:481404:-1
position: 481404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482672:-1
position: 482672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481404-482672:-1:exon

CCS41_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02190
old locus tag: CCS41_02175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIFSQIRDLAPHNKKDKFMVSVGEGKMVFSISGVSIHTESISEHSSQFIQNSLLGFNQTMLDTEELIIPIKKIMDEKIRNYFIPYGKRLVEIKNHAINTMKEFVKLVYAGTYLKHEGIIYYYDVEKKYCKSVIYAPGTEPESKLTGKSKQVKKMDHRFVTLIPNLESQDNLPDNSSDLGHFNEFKHENNKYYNELSELNAIIDGLVVDHGLIIMRNAGDNLYRLIFDDKIIIGIMSFTNVLFELKKLHTNGIYITDIKLGNLTYDEKSEEVRMIDVQNRVRKGEKHKKIGHTNRYVTVQVYSYCTERVDPNSEEMHDSNYHYLRVADEYAILICMMQSTTGDRVFRSPSPSNVGEKWNHHGIMNYKNQDIISDWIDHYVQLEFREHVKKFLTNPATAADESPDRKYLADMLSIQNGQFVQNF
SIO_010081: CCS41_RS02190
subclass of: SO_0000673
so part of: CCS41_RS02190
location: complement(481404..482672)
location: region:481404-482672:-1
so has part: feature:481404-482672:-1:exon

WP_119797131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481404-482672:-1:exon

CCS41_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02195
old locus tag: CCS41_02180
so part of: sequence
location: complement(482699..482959)
location: region:482699-482959:-1
so has part: feature:482699-482959:-1:exon
subclass of: SO_0000010

position:482699:-1
position: 482699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482959:-1
position: 482959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482699-482959:-1:exon

CCS41_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02195
old locus tag: CCS41_02180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATNDKKDKCTVFLNNHGGIIFYINGKSIFSQVIDNTSHAIILNIFLEHNLSIPNSDSYLIKDANKLEEFNLLYNKLHKKMKINLK
SIO_010081: CCS41_RS02195
subclass of: SO_0000673
so part of: CCS41_RS02195
location: complement(482699..482959)
location: region:482699-482959:-1
so has part: feature:482699-482959:-1:exon

WP_119797132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482699-482959:-1:exon

CCS41_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: tnpA
locus tag: CCS41_RS02200
old locus tag: CCS41_02185
so part of: sequence
location: complement(483190..483621)
location: region:483190-483621:-1
so has part: feature:483190-483621:-1:exon
subclass of: SO_0000010

position:483190:-1
position: 483190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483621:-1
position: 483621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483190-483621:-1:exon

CCS41_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: tnpA
locus tag: CCS41_RS02200
old locus tag: CCS41_02185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011236098.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MKDYQSLSHTKWDCKYHIVFIPKGRKKTIFGEIRKHLGEMFHELASQKECKIIEGHLMIDHIHICISIPPKYSVSYVMGYLKGKSAISIVRRFMGKVRNYSGENFWARGYFVSTVGLNEELIRAYIRYQEKQDNHYEQLKLRM
SIO_010081: CCS41_RS02200
subclass of: SO_0000673
so part of: CCS41_RS02200
location: complement(483190..483621)
location: region:483190-483621:-1
so has part: feature:483190-483621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483190-483621:-1:exon

CCS41_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02210
old locus tag: CCS41_02195
so part of: sequence
location: complement(485052..485966)
location: region:485052-485966:-1
so has part: feature:485052-485966:-1:exon
subclass of: SO_0000010

position:485052:-1
position: 485052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485966:-1
position: 485966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485052-485966:-1:exon

CCS41_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02210
old locus tag: CCS41_02195
inference: COORDINATES: protein motif:HMM:NF016777.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase family protein
translation: MRITMPIPTPQETTLDHKKRFLIPWDACDSHVHVIGSQDRYPMLSSRAYTPPEAQVADLQAHLSTLHMSRVVLIQPSFYGSDNRCLVAALQQLGNIARGVVVIDEKTSDKELSMLTINGVRGVRMNLESIGVRSPQAAHRELNSLATRIAPYGWHIQIYASSHVIAASINQISTLPVHVVLDHFAMIQPKKGLNQPDFLSILELVQTGKVYVKLSAPYRISQAVPDYSDVLPFASAFIEAHPDRMLWASDWPHTRRTCGNSTTEPSPFRVVDDQYILRLLQEWVPSKEIRKKILVDNPACLYGF
SIO_010081: CCS41_RS02210
subclass of: SO_0000673
so part of: CCS41_RS02210
location: complement(485052..485966)
location: region:485052-485966:-1
so has part: feature:485052-485966:-1:exon

WP_205411459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485052-485966:-1:exon

CCS41_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02215
old locus tag: CCS41_02200
so part of: sequence
location: complement(486890..488386)
location: region:486890-488386:-1
so has part: feature:486890-488386:-1:exon
subclass of: SO_0000010

position:486890:-1
position: 486890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488386:-1
position: 488386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486890-488386:-1:exon

CCS41_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02215
old locus tag: CCS41_02200
inference: COORDINATES: protein motif:HMM:NF024314.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SH3 domain-containing C40 family peptidase
translation: MNAFGLIKNLVKIMKKIISIILFLALIGYIFQIQRLRMDEKDHNSKAVYNYNVVDPTKRIFPLDGYDQNIDSWIPPNAKNYHIPILMDKSQNLYFSYLKSRYFGITENDESPWNPTFITKELGIVGENKIKNDVEKSIEKFTNNNSHVYGENFRKRTNSWKQWLRENASIDIDKQFNSHNRAIMITESSVRILPTETPAFDDFKKAGEGYPFDMLQISSVKPGTPVYIFGESKDKAWKLIISPSVTGWVKNNDLAKTDEKFISQWRAYAEQALGAFTKEPVSVNDLQGHFRFIAKIGTLLPIKSDETKGNLVVIPIRNEEGYAKIAYSVVTEDAFSLMPIKTTPKNFAKLIKSMHGKPYGWGNLYLNNDCSAEIRNLMLPFGVFFPRSSTNQAKVGRQIDLSHYDSAGRLAYLVRNGKPFTTIIYIKGHVMLYTGNAKVNGKVTPMTYQNVWGIKPEKEESRSIIGGSVFLPLLSIYPEDPSLESFASKELFKLIYLD
SIO_010081: CCS41_RS02215
subclass of: SO_0000673
so part of: CCS41_RS02215
location: complement(486890..488386)
location: region:486890-488386:-1
so has part: feature:486890-488386:-1:exon

WP_083429675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486890-488386:-1:exon

CCS41_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02220
old locus tag: CCS41_02205
so part of: sequence
location: complement(489102..490124)
location: region:489102-490124:-1
so has part: feature:489102-490124:-1:exon
subclass of: SO_0000010

position:489102:-1
position: 489102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490124:-1
position: 490124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489102-490124:-1:exon

CCS41_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02220
old locus tag: CCS41_02205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MKIELTADQKITLEAQHRQSHDRRVCDRIRCVLLSADGWTPPMIAHSQLINETTVRRHLTDYHKLNKLKPENGGSDGYLNAEQNTSLVEHLTQPLYHHNHQIVAYIAGRWNITFTVSGLYKGLKQHGFSYKKPKGVPHKFAVEKQPQFIKTYSELKDAAGNDPILFIDAVHPTQATKISYGWIRKGQDKTIETTGSRTRLNIMGALNIQNVANPIIRDDETINSENVVHFLSAIRAHYPITTTAHVILEGAGYHRSQLVQDAALTLNIQLHYLPPYSPNLNPIERLWKVMNEQTRNNRYYPSKQSFKNDILNFFEVKLPQMASSLVSRLNDNFQALNPAS
SIO_010081: CCS41_RS02220
subclass of: SO_0000673
so part of: CCS41_RS02220
location: complement(489102..490124)
location: region:489102-490124:-1
so has part: feature:489102-490124:-1:exon

WP_119797133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489102-490124:-1:exon

CCS41_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02225
old locus tag: CCS41_02210
so part of: sequence
location: complement(490198..491220)
location: region:490198-491220:-1
so has part: feature:490198-491220:-1:exon
subclass of: SO_0000010

position:490198:-1
position: 490198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491220:-1
position: 491220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490198-491220:-1:exon

CCS41_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02225
old locus tag: CCS41_02210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MKIELTADQKITLEAQHRQSHDRRVCDRIRCVLLSADGWTPPMVAHSQLINETTVRRHLTDYHKLNKLKPENGGSDGYLNAEQTTSLVEHLTQPLYHHNHQIVAYIAGRWNITFTVSGLYKGLKQHGFSYKKPKGVPHKFAVEKQQQFIKTYSELKDATGNDPILFIDAVHPTQTTKISYGWIRKGQDKTIETTGSRTRLNIMGALNIQNVANPIIRDDETINSENVVHFLSAIRAHYPITTTAHVILEGAGYHRSQLVQDAALTLNIQLHYLPPYSPNLNPIERLWKVMNEQTRNNRYYPSKQSFKNDILNFFEVKLPQMASSLVSRLNDNFQALNPAS
SIO_010081: CCS41_RS02225
subclass of: SO_0000673
so part of: CCS41_RS02225
location: complement(490198..491220)
location: region:490198-491220:-1
so has part: feature:490198-491220:-1:exon

WP_119797134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490198-491220:-1:exon

CCS41_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02230
old locus tag: CCS41_02215
so part of: sequence
location: 491646..492611
location: region:491646-492611:1
so has part: feature:491646-492611:1:exon
subclass of: SO_0000010

position:491646:1
position: 491646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492611:1
position: 492611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491646-492611:1:exon

CCS41_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02230
old locus tag: CCS41_02215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704718.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MPDISKPHDKLFKGTLQHQQITLDWLKAHLPKRILKLIDISTLKMVPNELSPKWPDTLYSDVVFSCKIKGQLSYIYILAEHQSSDDEMMAFRILCYVVELMNYHLKQGHKKLPIVVPLVLYHGEKSPYPHSRAIWECFEEPKLAKKLALKPFQLIDLTVMSDEEINRHGLASVMEILFKHYREKQSPLTWLEALLSEEKMTTIYTQVSRDYFKDVLRYFIEICGRASDLAESDELDKSLALWLNSVPQAKEDIMTFAQQLEKRGEKRGIEQGIQQGMQQGEKQASLKIAKELLSRGINRDVIKTSTGLSDQDIKDIEVLLH
SIO_010081: CCS41_RS02230
subclass of: SO_0000673
so part of: CCS41_RS02230
location: 491646..492611
location: region:491646-492611:1
so has part: feature:491646-492611:1:exon

WP_119797135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491646-492611:1:exon

CCS41_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02235
old locus tag: CCS41_02220
so part of: sequence
location: 493073..493837
location: region:493073-493837:1
so has part: feature:493073-493837:1:exon
subclass of: SO_0000010

position:493073:1
position: 493073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493837:1
position: 493837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493073-493837:1:exon

CCS41_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02235
old locus tag: CCS41_02220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708679.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
translation: MSNVITLYQQVKMSSREIARLTDKQHKHVLDDCRKMFESINIQSAEFSADYKDTSGRTYQEYLLDQDLTMTLVMGYSIPFRHRVATRWRELEEKTTQPVCVLPNFEDPPVAAMAWAEQFREKTRLALVNKEQEAELQELKNLFKEGITTTQFCKMLNGINTQQINHCLAERNWLYNESKSHTRWRATSYARDRYLTEHQHKISIHSGDDFIKYQPVLLRKGAIRLFDLYRKNKLPMKTHWDGQFTHAKELNIAS
SIO_010081: CCS41_RS02235
subclass of: SO_0000673
so part of: CCS41_RS02235
location: 493073..493837
location: region:493073-493837:1
so has part: feature:493073-493837:1:exon

WP_119797136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493073-493837:1:exon

CCS41_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02240
old locus tag: CCS41_02225
so part of: sequence
location: 494005..494271
location: region:494005-494271:1
so has part: feature:494005-494271:1:exon
subclass of: SO_0000010

position:494005:1
position: 494005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494271:1
position: 494271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494005-494271:1:exon

CCS41_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02240
old locus tag: CCS41_02225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MANIDITQFPELREVFPELTAVQFETAMLFALGVSQKDIALLRSVSYPAVKQTLASAKLKFEPYSLHGLFTVFHVRLALFALKGCRKR
SIO_010081: CCS41_RS02240
subclass of: SO_0000673
so part of: CCS41_RS02240
location: 494005..494271
location: region:494005-494271:1
so has part: feature:494005-494271:1:exon

WP_072551019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494005-494271:1:exon

CCS41_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02245
old locus tag: CCS41_02230
so part of: sequence
location: 494409..495167
location: region:494409-495167:1
so has part: feature:494409-495167:1:exon
subclass of: SO_0000010

position:494409:1
position: 494409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495167:1
position: 495167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494409-495167:1:exon

CCS41_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02245
old locus tag: CCS41_02230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704290.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MELGQMMKKIAKVSSSLPLTSMMENSQDVWGIKDCDSRFIYTNRAFLDFLNVPQGFDVIGRRDDELPTCIAEFALIIQKLERKVIKSGQKITLIKTHFFGREQKLQPYLYETFPLHNKRKKCIDTVFYGRKLAIISLPHYVGKLTATLLFEPPSNLFTQSELRIIFYLLRTMSAKEIGKKLARSHRTIENIIRILYQKARVHSLRDFKHFCHQTGFDRTVPQAFIRPGYSLLSRRFSYEQQTEQSEKKRVKK
SIO_010081: CCS41_RS02245
subclass of: SO_0000673
so part of: CCS41_RS02245
location: 494409..495167
location: region:494409-495167:1
so has part: feature:494409-495167:1:exon

WP_240313806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494409-495167:1:exon

CCS41_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02250
old locus tag: CCS41_02235
so part of: sequence
location: 495634..495864
location: region:495634-495864:1
so has part: feature:495634-495864:1:exon
subclass of: SO_0000010

position:495634:1
position: 495634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495864:1
position: 495864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495634-495864:1:exon

CCS41_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02250
old locus tag: CCS41_02235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706790.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excisionase
translation: MEISLKQWNQNQPRPRCMEQVRRWVRSGVIQPPPRRDGREYLVEAHAVKIDPTNPASYAGKRLMERLYHGTQKKAG
SIO_010081: CCS41_RS02250
subclass of: SO_0000673
so part of: CCS41_RS02250
location: 495634..495864
location: region:495634-495864:1
so has part: feature:495634-495864:1:exon

WP_119797137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495634-495864:1:exon

CCS41_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02255
old locus tag: CCS41_02240
so part of: sequence
location: 495839..496897
location: region:495839-496897:1
so has part: feature:495839-496897:1:exon
subclass of: SO_0000010

position:495839:1
position: 495839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496897:1
position: 496897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495839-496897:1:exon

CCS41_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02255
old locus tag: CCS41_02240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706789.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MARKRKPANRDLPPNLYVRNNGYYCYRDPRTGKEYGVGSVKRIAINEAIAMNMQIFDQRDSLINRINEVNTLSVTEWVVKFTEKLHQRGLRPKTFSDYQSRLAVITRAFPGKALNSLTTKEIAEFLNSYSNQGKTTTAKLIRNSLIDMFKEAIAEGHLTTNPVTATRNPRIQIQRERLSLENFLVIREVANQQQPWVGLSMDLALLTGQRVGDIQRMRWQDIYEGKWWVEQQKTGMKLAIPLTLSLEIINKDLAGILNDCRQQIRGEESVFIGKKKTHLSSKNLSRGFAGSREKSGLEWQGKPPSFHEIRSLSARLHSEARGKDFAQKLLGHKSAIMTDKYRDSRGSEWDEI
SIO_010081: CCS41_RS02255
subclass of: SO_0000673
so part of: CCS41_RS02255
location: 495839..496897
location: region:495839-496897:1
so has part: feature:495839-496897:1:exon

WP_119797138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495839-496897:1:exon

CCS41_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02260
old locus tag: CCS41_02245
so part of: sequence
location: complement(497012..498373)
location: region:497012-498373:-1
so has part: feature:497012-498373:-1:exon
subclass of: SO_0000010

position:497012:-1
position: 497012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498373:-1
position: 498373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497012-498373:-1:exon

CCS41_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02260
old locus tag: CCS41_02245
inference: COORDINATES: protein motif:HMM:NF028277.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcfC E-set like domain-containing protein
translation: MLTVNINAKEIDIEYLVPDGFSAAEQNIDMKLFGMLNGKALPGPFYFSEELKRLSFNTQLYRDNAISESTIQLLERILSQLPYMQCVNGCDYMLIGYRITLDKINQSLNIIDGTHEIVMPATTWGFVHNQSIYLGAATNHYRAMSINGQGYIGLPAQSFSYINWFYNRTHQENNNFTRQGISNWYLQKNFPRTYLRLGQKNNLDSQASVVHTLVNPWLDQFITLGSQHYFTQDKPVNNTLVLYAVSSGDYEFYHEGRLIHRIPAQVGRNTIDYDQLPGGYYDLDIRLIDSIGHQVSQEKIAISNIDYQGSQGWFITSGRGQHAENLLQFGQSINTRYFQYNFTLVGNSDHQWATEGNISRPMEANGIKFSPTFGVLSSEKNSGGYGHLRSGNRTLGYLTLSHYQHPDISIYVSGRQNSHLSYSRNVGSVQLNYRLNDTNRRLQQSIVNVFYLS
SIO_010081: CCS41_RS02260
subclass of: SO_0000673
so part of: CCS41_RS02260
location: complement(497012..498373)
location: region:497012-498373:-1
so has part: feature:497012-498373:-1:exon

WP_205411460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497012-498373:-1:exon

CCS41_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02265
old locus tag: CCS41_02250
so part of: sequence
location: complement(498672..499178)
location: region:498672-499178:-1
so has part: feature:498672-499178:-1:exon
subclass of: SO_0000010

position:498672:-1
position: 498672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499178:-1
position: 499178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498672-499178:-1:exon

CCS41_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02265
old locus tag: CCS41_02250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705479.1
GO component: GO:0009289 - pilus [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CS1 type fimbrial major subunit
translation: MKKIHEILTMKKLMTFSLISAALITTSVYAENIRKEQVIPIEVKVNSSVDIKMTTTDGRPITKIKMLPNAQNLGHYSFSQNIEITTLGMNNQLKVSLGKELELSHDDQQLTRVGVFFDNKKLSVANPVNYDPVENKVTGLLKIDAWASNNTKKGVFKGDLVLQLEEVA
SIO_010081: CCS41_RS02265
subclass of: SO_0000673
so part of: CCS41_RS02265
location: complement(498672..499178)
location: region:498672-499178:-1
so has part: feature:498672-499178:-1:exon

WP_240313807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498672-499178:-1:exon

CCS41_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: ybfF
locus tag: CCS41_RS02270
old locus tag: CCS41_02255
so part of: sequence
location: 499742..500482
location: region:499742-500482:1
so has part: feature:499742-500482:1:exon
subclass of: SO_0000010

position:499742:1
position: 499742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500482:1
position: 500482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499742-500482:1:exon

CCS41_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: ybfF
locus tag: CCS41_RS02270
old locus tag: CCS41_02255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004390566.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: esterase
translation: MPAASIRPVVLIHGLFGNLDNLGVLARDLQKNHPVIQLDLRNHGLSPRSPQMNYPAMAQDVVQLLTQLEIEKAIVIGHSMGGKVAMAMTAIAPQRVEKLIVIDIAPVAYQEHRHDQIFLALKEVTAAGIKQRQAAASLMHEFITEEQDIIPFLVKSFHDGEWRFDVPILCDQYSHIAGWQPVPMWPHPVLFIRGESSPYIQDSYRADIVRQFPQARVHVISGCGHAVHAEKPDAVLRAIHRFIYHR
SIO_010081: CCS41_RS02270
subclass of: SO_0000673
so part of: CCS41_RS02270
location: 499742..500482
location: region:499742-500482:1
so has part: feature:499742-500482:1:exon

WP_119797702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499742-500482:1:exon

CCS41_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02275
old locus tag: CCS41_02260
pseudo: true
so part of: sequence
location: 500657..502739
location: region:500657-502739:1
so has part: feature:500657-502739:1:exon
subclass of: SO_0000010

position:500657:1
position: 500657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502739:1
position: 502739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500657-502739:1:exon

CCS41_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02275
old locus tag: CCS41_02260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015874439.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
SIO_010081: CCS41_RS02275
subclass of: SO_0000673
so part of: CCS41_RS02275
location: 500657..502739
location: region:500657-502739:1
so has part: feature:500657-502739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500657-502739:1:exon

CCS41_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02280
old locus tag: CCS41_02265
so part of: sequence
location: 502756..503826
location: region:502756-503826:1
so has part: feature:502756-503826:1:exon
subclass of: SO_0000010

position:502756:1
position: 502756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503826:1
position: 503826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502756-503826:1:exon

CCS41_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02280
old locus tag: CCS41_02265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209061.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ChuX/HutX family heme-like substrate-binding protein
translation: MESSLYQQYLQAKQNNPHLLTRDIANMLKVKEVELTHSRVGYDAQRLQVDALTLLTKLETVGFVKSVTANQYAIHQLIGRYQNQKFTAHGGLILNPRELDLRLFLAKWDSIFSVREYDETQGEQHSIHFYDLQGNAAHEVYPMNETDQLNWQSLIKEYASDDNPELVLQPVLAPREDTDNNLLINNAAQIEDEWRKMTDIHQFFRLLERYNATRQQLFRVVADDLAYQVNNSALTQILNAAHQNQNEVMIFVSNGACVQIFTGLIEQSVLLQETTKDNWIKVDNRRFTLQLNESAIAESWITRKPTRDGFVTSLELFSTEGIQIAQLFGQRTEGQPEQNQWREQLAALAVKKDVAV
SIO_010081: CCS41_RS02280
subclass of: SO_0000673
so part of: CCS41_RS02280
location: 502756..503826
location: region:502756-503826:1
so has part: feature:502756-503826:1:exon

WP_119797140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502756-503826:1:exon

CCS41_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02285
old locus tag: CCS41_02270
so part of: sequence
location: 503823..504656
location: region:503823-504656:1
so has part: feature:503823-504656:1:exon
subclass of: SO_0000010

position:503823:1
position: 503823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504656:1
position: 504656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503823-504656:1:exon

CCS41_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02285
old locus tag: CCS41_02270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006707541.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKTWLLSFILALLLFNITTVGIAKERIVTIGGDVSEISYALGVGEKIVGRDSTSLQPSAIRALPDIGYMRQINAEGILAMKPTLVLSSALAEPSLVLQQIADSGVEVVSIPGDATLDTVPKKIAAIAAAIDQFDKGLQLTQTYRQKIAAIDNHPLAVRVLCIMSHGGNSPLAAGQHTAADAMIRAAGAKNTMQGFNRYQPLSQEGAIASAPDLLLVTTDGVKSLGGVDKIWQLPGIALTPAGKHRRILVLDDMALLGFGLQTPDVLGQLRHAAEQSL
SIO_010081: CCS41_RS02285
subclass of: SO_0000673
so part of: CCS41_RS02285
location: 503823..504656
location: region:503823-504656:1
so has part: feature:503823-504656:1:exon

WP_119797141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503823-504656:1:exon

CCS41_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02290
old locus tag: CCS41_02275
so part of: sequence
location: 504653..505636
location: region:504653-505636:1
so has part: feature:504653-505636:1:exon
subclass of: SO_0000010

position:504653:1
position: 504653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505636:1
position: 505636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504653-505636:1:exon

CCS41_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02290
old locus tag: CCS41_02275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004943655.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron ABC transporter permease
translation: MRYLAPNYALGGLLALLIFLIIGSVNLGALTLSFHTLWYSSFDDIPWQIWLQIRLPRVLLAILVGCALATSGAVMQGLFRNPLADPSLLGISSGAALLVALVIIMPCTLPTALSFYSHIIAAFIGSLLISFLILSLSRVSHGNLSRLLLAGIAINALCGVAIGILNYLSSDQQLRQFSLWMMGSLSQVQWSTLLVAAALIIPATMMTLLQARKLNLLQLGDEEAHYLGIDVQRTKKLLLLLSALLVAAAVALSGVIGFIGLVIPHLIRMNLGADHRWLLPGAALGGACLLLSADTLARTLVAPAEMPVGLITSLIGGPYFLWLVLRQ
SIO_010081: CCS41_RS02290
subclass of: SO_0000673
so part of: CCS41_RS02290
location: 504653..505636
location: region:504653-505636:1
so has part: feature:504653-505636:1:exon

WP_119797142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504653-505636:1:exon

CCS41_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02300
old locus tag: CCS41_02280
so part of: sequence
location: complement(506143..506523)
location: region:506143-506523:-1
so has part: feature:506143-506523:-1:exon
subclass of: SO_0000010

position:506143:-1
position: 506143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506523:-1
position: 506523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506143-506523:-1:exon

CCS41_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02300
old locus tag: CCS41_02280
inference: COORDINATES: protein motif:HMM:NF024751.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MKGKRCYGQHDWHAKARTNVIGAQLNGKLTTVCTFDCHINSDIFYAWVTQDLLPKSPPGAVLVMDNVSFHKRQDIQSARQKAGFILEYLPTYSPDMNSIEHKWAQAKALRRKRQCDIDTLFSDPLF
SIO_010081: CCS41_RS02300
subclass of: SO_0000673
so part of: CCS41_RS02300
location: complement(506143..506523)
location: region:506143-506523:-1
so has part: feature:506143-506523:-1:exon

WP_240313808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506143-506523:-1:exon

CCS41_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02305
old locus tag: CCS41_02285
so part of: sequence
location: 506614..506958
location: region:506614-506958:1
so has part: feature:506614-506958:1:exon
subclass of: SO_0000010

position:506614:1
position: 506614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506958:1
position: 506958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506614-506958:1:exon

CCS41_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02305
old locus tag: CCS41_02285
inference: COORDINATES: protein motif:HMM:NF019984.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron maturase-specific domain-containing protein
translation: MMGKTVSVKQKIRDVVRKGQHWDWPTLVKEKVNPILRGWGNYFKTGNSRKHFLSIANYTIWTLCIMLRKKHKKRGKGWRDHPPSWFYDYHGLFKLYSLSVTGDEGSRYARPVPS
SIO_010081: CCS41_RS02305
subclass of: SO_0000673
so part of: CCS41_RS02305
location: 506614..506958
location: region:506614-506958:1
so has part: feature:506614-506958:1:exon

WP_240313809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506614-506958:1:exon

CCS41_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02310
old locus tag: CCS41_02290
so part of: sequence
location: 507109..507729
location: region:507109-507729:1
so has part: feature:507109-507729:1:exon
subclass of: SO_0000010

position:507109:1
position: 507109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507729:1
position: 507729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507109-507729:1:exon

CCS41_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02310
old locus tag: CCS41_02290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704143.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaJ viral recombinase family protein
translation: MEQRTEAWFAARSGKVTASKLAEVMAKVKTGDAATRKKYRAELICQRLTGKRGDTFVTLDMKHGTALEPVAREAYILREFAVEVTEVGLVDHPTIEGFAASPDGLVNEDGLIEIKCPKTWTHLKTIRTGEPEKKYRLQMHAQMLCTGRRWCDFVSYDNRLPDTLAYFKKRIHFDEALGKEIETEVRKFLQELEREIEQIKTYGRVA
SIO_010081: CCS41_RS02310
subclass of: SO_0000673
so part of: CCS41_RS02310
location: 507109..507729
location: region:507109-507729:1
so has part: feature:507109-507729:1:exon

WP_119797703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507109-507729:1:exon

CCS41_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02315
old locus tag: CCS41_02295
so part of: sequence
location: 507871..509025
location: region:507871-509025:1
so has part: feature:507871-509025:1:exon
subclass of: SO_0000010

position:507871:1
position: 507871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509025:1
position: 509025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507871-509025:1:exon

CCS41_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02315
old locus tag: CCS41_02295
inference: COORDINATES: protein motif:HMM:NF024685.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIR2 family protein
translation: MNIQEFISHYKNHPVLFIGTGFSLRYLKNAYSWDGLLSKISLELTDNAEFYYDLKASCMLSGVCHFDRLATKLEEEFNQHLSKERDGKFKEINTVFYENMKKNIKLSRFKIYISSLFSQLKIREERQEEISDLIKARKNMGSVITTHYDGLIEKFFNFTPLIGNDILLSNPYGSVYKIHGCAQDPCNIIITHEDYAHFNNKYELIRSHLLSLFIHNPIVFIGYSISDQNIKYLLKTVFSYVNVNTELAKRIRENFLLIEYQKGTDSIDITEHDIEIEGMATIRINKIKTDNYKAIYDALSRLVLPVSARDIRKVQKVWNTIISGGEIKVKITENIDDLKNEERVIAVGSEKTLSYEFQTKSEMRQNYFSIIDEAKGKMVESLNK
SIO_010081: CCS41_RS02315
subclass of: SO_0000673
so part of: CCS41_RS02315
location: 507871..509025
location: region:507871-509025:1
so has part: feature:507871-509025:1:exon

WP_240313810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507871-509025:1:exon

CCS41_RS16290
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16290
so part of: sequence
location: 509029..509298
location: region:509029-509298:1
so has part: feature:509029-509298:1:exon
subclass of: SO_0000010

position:509029:1
position: 509029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509298:1
position: 509298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509029-509298:1:exon

CCS41_RS16290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQSNPFFSVFAFSAICSFLDNVDCLKAQQLKKVNEHFQRIEQICKNSPTSLRAILCDNAISDARKENCIIYSVYRDQIPLNEVREHLLS
SIO_010081: CCS41_RS16290
subclass of: SO_0000673
so part of: CCS41_RS16290
location: 509029..509298
location: region:509029-509298:1
so has part: feature:509029-509298:1:exon

WP_240313811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509029-509298:1:exon

CCS41_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02320
old locus tag: CCS41_02300
so part of: sequence
location: 509518..510462
location: region:509518-510462:1
so has part: feature:509518-510462:1:exon
subclass of: SO_0000010

position:509518:1
position: 509518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510462:1
position: 510462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509518-510462:1:exon

CCS41_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02320
old locus tag: CCS41_02300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410598.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MPQVPNPHDATFRKCMSNVNVARDFLQFHLPPEIKEQCDFSTLKIEPGSFIEPNLRQHYSDIVYSLKTKEGKRCYIHCLIEHQSTPKKLMAFRLFRYSIPIMQQHLDQGHDELPVVIPILFYHGETSPYPYSMDWLDCFADRDLAQRVYSQPFPLVDVTTIPDEEILTHRSVALLELVQKHIYARDIIVISQSIAHLLNTGYTESELVKTLMYYIAQRGKTADTPQFFKTIVEHAPTYSEDIMTIAQDLRREGREEGMQQGMQQGMQQGMQQGRQERNTEIAKALLKNGVDRALVKTSTGLSDQDIEDIEVLLH
SIO_010081: CCS41_RS02320
subclass of: SO_0000673
so part of: CCS41_RS02320
location: 509518..510462
location: region:509518-510462:1
so has part: feature:509518-510462:1:exon

WP_119797144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509518-510462:1:exon

CCS41_RS16295
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16295
so part of: sequence
location: 510823..511176
location: region:510823-511176:1
so has part: feature:510823-511176:1:exon
subclass of: SO_0000010

position:510823:1
position: 510823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511176:1
position: 511176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510823-511176:1:exon

CCS41_RS16295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16295
inference: COORDINATES: protein motif:HMM:NF021206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
translation: MSNVITIYQQVKMSSREIARLTGKQHKHVLDDCRKMFESINIQSAEFSADYKDTSGRTYQEYLLDQDLTMTLVMGYSIQFRHRVATRWRELEEKATRPVCILPNFEDPPVAAIAWAE
SIO_010081: CCS41_RS16295
subclass of: SO_0000673
so part of: CCS41_RS16295
location: 510823..511176
location: region:510823-511176:1
so has part: feature:510823-511176:1:exon

WP_240313812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510823-511176:1:exon

CCS41_RS16300
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16300
so part of: sequence
location: 511204..511587
location: region:511204-511587:1
so has part: feature:511204-511587:1:exon
subclass of: SO_0000010

position:511204:1
position: 511204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511587:1
position: 511587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511204-511587:1:exon

CCS41_RS16300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16300
inference: COORDINATES: protein motif:HMM:NF015340.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage antirepressor KilAC domain-containing protein
translation: MNKEQEAELQELKNLFKEGITTTQFCKMLNGINTQQINHCLAERNWLYNESKSHTRWRATSYARDRYLTEHQHKISIHNGDDFIKYQPVLLRKGAIRLFDLYRKNKLPMKTHWDGQFTHTKELNIAS
SIO_010081: CCS41_RS16300
subclass of: SO_0000673
so part of: CCS41_RS16300
location: 511204..511587
location: region:511204-511587:1
so has part: feature:511204-511587:1:exon

WP_240313813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511204-511587:1:exon

CCS41_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02330
old locus tag: CCS41_02310
so part of: sequence
location: 511755..512018
location: region:511755-512018:1
so has part: feature:511755-512018:1:exon
subclass of: SO_0000010

position:511755:1
position: 511755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512018:1
position: 512018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511755-512018:1:exon

CCS41_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02330
old locus tag: CCS41_02310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MANIDITQFPELREVFPELTPVQFETAMLFSLGVSQKEISELRSISYKVVKQTLEAAKIKFEPRSLHGLLTIFHVRLVLFALQQCVK
SIO_010081: CCS41_RS02330
subclass of: SO_0000673
so part of: CCS41_RS02330
location: 511755..512018
location: region:511755-512018:1
so has part: feature:511755-512018:1:exon

WP_119797145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511755-512018:1:exon

CCS41_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02335
old locus tag: CCS41_02315
so part of: sequence
location: 512418..513056
location: region:512418-513056:1
so has part: feature:512418-513056:1:exon
subclass of: SO_0000010

position:512418:1
position: 512418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513056:1
position: 513056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512418-513056:1:exon

CCS41_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02335
old locus tag: CCS41_02315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704525.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MMENSQDVWGIKNCDSRFIYTNRAFFDFFNLPQGFDVIGRRDDELPTCIAEFSLITQKLEREVIKSGQKITLIKTHFFDREQKLQPYLYETFPLHNKRKKCIGTVFYGRKLAIISLPHYVDKLTATLLLEPPSNLFTQSELRIVFYLLRTMSAKEIGKKLARSHRTIENRIRILYQKAKVHSLRDFKHFCHQTGFDRTVPHAFIRPGIQCIE
SIO_010081: CCS41_RS02335
subclass of: SO_0000673
so part of: CCS41_RS02335
location: 512418..513056
location: region:512418-513056:1
so has part: feature:512418-513056:1:exon

WP_240313814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512418-513056:1:exon

CCS41_RS15510
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15510
so part of: sequence
location: 513068..513211
location: region:513068-513211:1
so has part: feature:513068-513211:1:exon
subclass of: SO_0000010

position:513068:1
position: 513068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513211:1
position: 513211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513068-513211:1:exon

CCS41_RS15510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15510
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNRQSRARKRALKDKVLEAKRNENKNWFNRLRLWFKKKKKLKHRLP
SIO_010081: CCS41_RS15510
subclass of: SO_0000673
so part of: CCS41_RS15510
location: 513068..513211
location: region:513068-513211:1
so has part: feature:513068-513211:1:exon

WP_162859960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513068-513211:1:exon

CCS41_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02340
old locus tag: CCS41_02320
so part of: sequence
location: 513316..513513
location: region:513316-513513:1
so has part: feature:513316-513513:1:exon
subclass of: SO_0000010

position:513316:1
position: 513316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513513:1
position: 513513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513316-513513:1:exon

CCS41_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02340
old locus tag: CCS41_02320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQKVMKEPSEMVYIGATLYQKLETFAASISAHSEYKITAAHFAQYLVDHYGEIAQDTMIATLKN
SIO_010081: CCS41_RS02340
subclass of: SO_0000673
so part of: CCS41_RS02340
location: 513316..513513
location: region:513316-513513:1
so has part: feature:513316-513513:1:exon

WP_119797146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513316-513513:1:exon

CCS41_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02345
old locus tag: CCS41_02325
so part of: sequence
location: 513775..514005
location: region:513775-514005:1
so has part: feature:513775-514005:1:exon
subclass of: SO_0000010

position:513775:1
position: 513775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514005:1
position: 514005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513775-514005:1:exon

CCS41_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02345
old locus tag: CCS41_02325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706790.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excisionase
translation: MEISLKQWNQNQPRPRCMEQVRRWVRSGVIQPPPRLDGREYLVNANAVKIDPTKPASYAGKHLMERLYHGTQKKTG
SIO_010081: CCS41_RS02345
subclass of: SO_0000673
so part of: CCS41_RS02345
location: 513775..514005
location: region:513775-514005:1
so has part: feature:513775-514005:1:exon

WP_072551147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513775-514005:1:exon

CCS41_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02350
old locus tag: CCS41_02330
so part of: sequence
location: 513980..515038
location: region:513980-515038:1
so has part: feature:513980-515038:1:exon
subclass of: SO_0000010

position:513980:1
position: 513980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515038:1
position: 515038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513980-515038:1:exon

CCS41_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02350
old locus tag: CCS41_02330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706789.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MARKRKPANRDLPPNLYVRNNGYYCYRDPRTGKEYGVGSVKRVAVNEAIAMNMQIFDRRHSLVDRINEVNTLSVTEWVARFKEKLHQRGLRPKTLTDYQSRLTAITQAFPDSTLNTLTTKDIAEFLNSYSDQGKTASAKLIRSLLIDMFNEAIAEGHLATNPATATKNPRVQIQRERLSLEEFLVIREAANQRQPWIGLSMDLALLTGQRVGDIQRMKWQDIHDGKWWVEQQKTGMKLAIPLTLSLEVIDKNLEGVLADCRQQIRGEEYVFIWKKKTHLNPKRLSQGFTDLREQSGLKWQGTPPSFHEIRSLSARLHSEANSKDFAQKLLGHKSSAMTDKYRDSRGSEWDEI
SIO_010081: CCS41_RS02350
subclass of: SO_0000673
so part of: CCS41_RS02350
location: 513980..515038
location: region:513980-515038:1
so has part: feature:513980-515038:1:exon

WP_072551146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513980-515038:1:exon

CCS41_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: rsmJ
locus tag: CCS41_RS02355
old locus tag: CCS41_02335
so part of: sequence
location: complement(515178..515921)
location: region:515178-515921:-1
so has part: feature:515178-515921:-1:exon
subclass of: SO_0000010

position:515178:-1
position: 515178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515921:-1
position: 515921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515178-515921:-1:exon

CCS41_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: rsmJ
locus tag: CCS41_RS02355
old locus tag: CCS41_02335
EC number: 2.1.1.242
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010848399.1
GO function: GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ
translation: MNICLQYEAGSDPKALSALAERWDLTDDNQTAMALILTSERLELRKRDEAKLGGIYVDFASGTMTHRRRFGGGRGEAIAKAIGIKKSYLPTVVDATAGLGRDAFLLAALGCNVQMLERHPVVAALLDDGLQRGYQNAEIGSWLRERMTLLHTSSLTSLASILPRPDVVYLDPMYPHRRKSALVKKEMRVFQSLVGTDDDADGLLAPARELAVKRVVVKRPSYAQPLAGVVAQAAITTKNHRFDLYFT
SIO_010081: CCS41_RS02355
subclass of: SO_0000673
so part of: CCS41_RS02355
location: complement(515178..515921)
location: region:515178-515921:-1
so has part: feature:515178-515921:-1:exon

WP_072551145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515178-515921:-1:exon

CCS41_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: prlC
locus tag: CCS41_RS02360
old locus tag: CCS41_02340
so part of: sequence
location: complement(516093..518156)
location: region:516093-518156:-1
so has part: feature:516093-518156:-1:exon
subclass of: SO_0000010

position:516093:-1
position: 516093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518156:-1
position: 518156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516093-518156:-1:exon

CCS41_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: prlC
locus tag: CCS41_RS02360
old locus tag: CCS41_02340
EC number: 3.4.24.70
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706955.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligopeptidase A
translation: MTNPLLTAFSLPPFSAIRPEHIVSAVQVALKECRQSVERVLAQQEPFTWDNLCQPLAESDDRLARIWSPISHLNAVQNSPQLRAAYEQSLPLLSEFSTWLGQHKGLYQAYLNLQAGSHFAKLNTAQRTAIENTLRDFKLSGIGLAAEQQKHYGEIVARLSELGSAYSNNVLDATMGWSKLITDVKQLHGLPESALAAAKAMAEAKQQEGWLLTLDMPSYLPVLTYADNAQLRQEVYYAYSTRASDQGPHAGQWDNSTIMEEILALRHQLAQLLGFVNYADKSLATKMAENPQKVLNFLNDLAKRARPQAERELAQLQAFAKQYYGIDELAAWDITYYSEKQKQHLFSINDEQLRPYFPVGSVLKGLFEVVRRIYGIEVKERHDVDTWHSEVRFFDLFDANGELSGSFYLDLYARENKRGGAWMDDCTSSLRLANGKHQKPVAYLTCNFNPAVGDQPALFTHDEVTTLFHEFGHGLHHMLTKIDIAGVSGISGVPWDAVELPSQFMENWCWESHALAFISGHYQTQEPLPEKMLDKLLAAKNYQAALFILRQLEFGLFDFRMHCEYDTAKGAQILPTLYEVKKRVAVVPSPIWSRFPHAFSHIFAGGYAAGYYSYLWAEVLSADAFSRFEEEGIFNATTGQSFLDNILSRGGSEDPMLLFKRFRGREPQLDAMLRHYGIQKEDVVPRV
SIO_010081: CCS41_RS02360
subclass of: SO_0000673
so part of: CCS41_RS02360
location: complement(516093..518156)
location: region:516093-518156:-1
so has part: feature:516093-518156:-1:exon

WP_072551144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516093-518156:-1:exon

CCS41_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02365
old locus tag: CCS41_02345
so part of: sequence
location: complement(518408..519094)
location: region:518408-519094:-1
so has part: feature:518408-519094:-1:exon
subclass of: SO_0000010

position:518408:-1
position: 518408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519094:-1
position: 519094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518408-519094:-1:exon

CCS41_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02365
old locus tag: CCS41_02345
inference: COORDINATES: protein motif:HMM:NF019984.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron maturase-specific domain-containing protein
translation: MAEVCQIVCGVISPLLANLYLHWLDSTWEKKAFGKRPHDAHIVRYADDFVILCSKRPEFYLDQAKKVLDRLGLTLNAKKTRIVNAMKEPFDFLGHRFAVQPSKVTGELKTFYYPTPKAMKSVKQKIRDVVRKGQHWDWPTLVKEKVNPILRGWGNYFKTGNSRKHFLSIANYTIWTLCIMLRKKHKKRGKGWRDHPPSWFYDYHGLFKLYSLSVTGDEGSRYARPVPS
SIO_010081: CCS41_RS02365
subclass of: SO_0000673
so part of: CCS41_RS02365
location: complement(518408..519094)
location: region:518408-519094:-1
so has part: feature:518408-519094:-1:exon

WP_119797147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518408-519094:-1:exon

CCS41_RS15940
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15940
so part of: sequence
location: complement(519042..519599)
location: region:519042-519599:-1
so has part: feature:519042-519599:-1:exon
subclass of: SO_0000010

position:519042:-1
position: 519042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519599:-1
position: 519599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519042-519599:-1:exon

CCS41_RS15940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDETVWAQVIALLSEPERLKKEYEQRLTQASEHSGQTADAERLKKQENQLNVGRSRLIDSFAEGLIGKTDFEPRIRVMTLRLAELARQRVKVKQATENQHELLLLVNRVEDFAAAVTERLNTDDFLMKREILRALVKRIEIYRDEIVVVFRVNPGNDTSLEAGSDKTYGRSLPDCLRSNFSLAR
SIO_010081: CCS41_RS15940
subclass of: SO_0000673
so part of: CCS41_RS15940
location: complement(519042..519599)
location: region:519042-519599:-1
so has part: feature:519042-519599:-1:exon

WP_205411462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519042-519599:-1:exon

CCS41_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02370
old locus tag: CCS41_02350
so part of: sequence
location: complement(519539..520720)
location: region:519539-520720:-1
so has part: feature:519539-520720:-1:exon
subclass of: SO_0000010

position:519539:-1
position: 519539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520720:-1
position: 520720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519539-520720:-1:exon

CCS41_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02370
old locus tag: CCS41_02350
inference: COORDINATES: protein motif:HMM:NF012464.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MNKALVALYARVSSGQQVKNGTIGSQLAAIKDRIREDGHVLPDAMLFIDDGVSGATLIRPQLERLRDYAAAGDIECLYILSPDRLARKYAYQALLMEEFSACGVEVIFICHTPGDTPEDMMLLQMQGMFAEYERAKIMERNRRGKLHGARCGNVGVLSGAPYGYRYIRRQPDGTPAQYIVNLHEASVVRKIFSWAGIERLSLGGVVRRLAEKGIESATGKPGWDRSTVWGMLKNPAYKGLAVFGKTKNCAPRPRVRAARNSADILKNGYSVIRSKPDDGIGIPVPAIINSALFLTVNEQLEENRRHARQGRRGAAYLLQGLTVCGHCRYAYYGKKVSKSAAKGGRSILITTVLGRMLTALGAFGCVTINRSGHPCWMKRSGHRSLRCCLSRNG
SIO_010081: CCS41_RS02370
subclass of: SO_0000673
so part of: CCS41_RS02370
location: complement(519539..520720)
location: region:519539-520720:-1
so has part: feature:519539-520720:-1:exon

WP_205411463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519539-520720:-1:exon

CCS41_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02380
old locus tag: CCS41_02360
so part of: sequence
location: 520896..521714
location: region:520896-521714:1
so has part: feature:520896-521714:1:exon
subclass of: SO_0000010

position:520896:1
position: 520896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521714:1
position: 521714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520896-521714:1:exon

CCS41_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02380
old locus tag: CCS41_02360
inference: COORDINATES: protein motif:HMM:NF012307.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron maturase-specific domain-containing protein
translation: MASVSLLRVTPCAVISLNNEGKLSDAPIRMTRLEAAPVKTQAPAYAKVCTIVCGVISPLLANLYLHWLDSTWEKKAFGKRPHDAHIVRYADDFVILCSKRPEFYLDQAKKVLDRLGLTLNAKKTWIVNAMKEPFDFLGHRFAVQPSKVTGELKTFYYPTPKAMKSVKQKIRDVVRKGQHWDWPTLVKEKVNPILRGWGNYFKTGNSRKHFLSIANYTIWTLCIMLRKKHKKRGKGWRDHPSSWFYDYHGLFKLYSLSVTGDEGSRYARPVPS
SIO_010081: CCS41_RS02380
subclass of: SO_0000673
so part of: CCS41_RS02380
location: 520896..521714
location: region:520896-521714:1
so has part: feature:520896-521714:1:exon

WP_119797149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520896-521714:1:exon

CCS41_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02385
old locus tag: CCS41_02365
so part of: sequence
location: 521865..522485
location: region:521865-522485:1
so has part: feature:521865-522485:1:exon
subclass of: SO_0000010

position:521865:1
position: 521865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522485:1
position: 522485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521865-522485:1:exon

CCS41_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02385
old locus tag: CCS41_02365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704143.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaJ viral recombinase family protein
translation: MEQRTEAWFAARSGKVTASKLAEVMAKVKTGDAATRKKYRAELICQRLTGKRGDTFVTLDMKHGTALEPVAREAYILREFAVEVTEVGLVDHPTIEGFAASPDGLVNEDGLIEIKCPKTWTHLKTIRTGEPEKKYRLQMHAQMLCTGRRWCDFVSYDNRLPDTLAYFKKRIHFDEALGKEIETEVRKFLQELEDEIEQIKTYGKVA
SIO_010081: CCS41_RS02385
subclass of: SO_0000673
so part of: CCS41_RS02385
location: 521865..522485
location: region:521865-522485:1
so has part: feature:521865-522485:1:exon

WP_119797704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521865-522485:1:exon

CCS41_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02390
old locus tag: CCS41_02370
so part of: sequence
location: 522597..523520
location: region:522597-523520:1
so has part: feature:522597-523520:1:exon
subclass of: SO_0000010

position:522597:1
position: 522597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523520:1
position: 523520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522597-523520:1:exon

CCS41_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02390
old locus tag: CCS41_02370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410598.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MPQVPNPHDATFRKCMSNVNVARDFLQFHLPPEIKEQCDFSTLKIEPGSFIEPNLRQHYSDIVYSLKTKEGKRCYIHCLIEHQSTPKKLMAFRLFRYSIPIMQQHLDQGHDELPVVIPILFYHGETSPYPYSMDWLDCFADRDLAQRVYSQPFPLVDVTTIPDEEILTHRSVALLELVQKHIYARDIIVISQSIAHLLNTGYTESELVKTLMYYIAQRGKTADTPQFFKTIVEHAPTYSEDIMTIAQDLRREGREEGMQQGMQQGMQQGKKQAALEFAKKLRDDGADRDTIKKYTGLSDQDLGTSLH
SIO_010081: CCS41_RS02390
subclass of: SO_0000673
so part of: CCS41_RS02390
location: 522597..523520
location: region:522597-523520:1
so has part: feature:522597-523520:1:exon

WP_275887674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522597-523520:1:exon

CCS41_RS15945
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15945
so part of: sequence
location: 523977..524351
location: region:523977-524351:1
so has part: feature:523977-524351:1:exon
subclass of: SO_0000010

position:523977:1
position: 523977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524351:1
position: 524351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523977-524351:1:exon

CCS41_RS15945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15945
inference: COORDINATES: protein motif:HMM:NF021206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
translation: MSNVITIYQQVKISSREIARLTGKHHKDVLYDCRKMFEVLTIQSADFSADYKDASGRTYQEYLLDQDLTMTLVMGYSIPLRHKVATRWRELEEKATRPVCILPNFEDPLLRLWHGQNSFVKKPG
SIO_010081: CCS41_RS15945
subclass of: SO_0000673
so part of: CCS41_RS15945
location: 523977..524351
location: region:523977-524351:1
so has part: feature:523977-524351:1:exon

WP_240313815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523977-524351:1:exon

CCS41_RS15950
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15950
so part of: sequence
location: 524312..524740
location: region:524312-524740:1
so has part: feature:524312-524740:1:exon
subclass of: SO_0000010

position:524312:1
position: 524312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524740:1
position: 524740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524312-524740:1:exon

CCS41_RS15950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15950
inference: COORDINATES: protein motif:HMM:NF015340.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage antirepressor KilAC domain-containing protein
translation: MAWAEQFREKTRLALVNKEQEAELKELKNLFKEGITTTQFCKMLNGINTQQINHCLAERNWLYNESKSHIRWRATSYARDRYLTEHQHKISIHSGDDFIKYQPVLLRKGAIRLFDLYRKNKLPMKTHWDGHFTHEKELSIAS
SIO_010081: CCS41_RS15950
subclass of: SO_0000673
so part of: CCS41_RS15950
location: 524312..524740
location: region:524312-524740:1
so has part: feature:524312-524740:1:exon

WP_205411464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524312-524740:1:exon

CCS41_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02400
old locus tag: CCS41_02380
so part of: sequence
location: 524900..525166
location: region:524900-525166:1
so has part: feature:524900-525166:1:exon
subclass of: SO_0000010

position:524900:1
position: 524900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525166:1
position: 525166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524900-525166:1:exon

CCS41_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02400
old locus tag: CCS41_02380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MTNIDITQFPELREVFPELTAVQFETAMLFALGVSQKDIALLRSVSYPAVKQTLASAKLKFELYSLHGLFTVFHVRLALFALKGCRKR
SIO_010081: CCS41_RS02400
subclass of: SO_0000673
so part of: CCS41_RS02400
location: 524900..525166
location: region:524900-525166:1
so has part: feature:524900-525166:1:exon

WP_119797151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524900-525166:1:exon

CCS41_RS16305
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16305
so part of: sequence
location: 525303..525620
location: region:525303-525620:1
so has part: feature:525303-525620:1:exon
subclass of: SO_0000010

position:525303:1
position: 525303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525620:1
position: 525620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525303-525620:1:exon

CCS41_RS16305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16305
inference: COORDINATES: protein motif:HMM:NF020037.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MELGQMMKKIAKVSRSLPLTAMMENSQDVWGIKDCDSRFIYTNRAFLDFLNVPQGFYVIGRRDDELPTCIAEFALIIQKLEREVIKSGQKITLIKTHFFGREQKL
SIO_010081: CCS41_RS16305
subclass of: SO_0000673
so part of: CCS41_RS16305
location: 525303..525620
location: region:525303-525620:1
so has part: feature:525303-525620:1:exon

WP_240313816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525303-525620:1:exon

CCS41_RS16310
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16310
so part of: sequence
location: 525696..526004
location: region:525696-526004:1
so has part: feature:525696-526004:1:exon
subclass of: SO_0000010

position:525696:1
position: 525696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526004:1
position: 526004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525696-526004:1:exon

CCS41_RS16310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIISLPHYVGKLTATLLFEPHSTLFTQSELRIIFYLLRTMSAKEIGKKLARSHRTIENRIRILYQKAKVHSLRDFKHFCHQTGFDRTVPHAFIRPGIQCIE
SIO_010081: CCS41_RS16310
subclass of: SO_0000673
so part of: CCS41_RS16310
location: 525696..526004
location: region:525696-526004:1
so has part: feature:525696-526004:1:exon

WP_240313817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525696-526004:1:exon

CCS41_RS15515
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15515
so part of: sequence
location: 526016..526159
location: region:526016-526159:1
so has part: feature:526016-526159:1:exon
subclass of: SO_0000010

position:526016:1
position: 526016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526159:1
position: 526159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526016-526159:1:exon

CCS41_RS15515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15515
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNRQSRAKKRELKDKALEAKRNEKKNWLTRLRSWFNKKKKPKHRLP
SIO_010081: CCS41_RS15515
subclass of: SO_0000673
so part of: CCS41_RS15515
location: 526016..526159
location: region:526016-526159:1
so has part: feature:526016-526159:1:exon

WP_162859961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526016-526159:1:exon

CCS41_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02410
old locus tag: CCS41_02390
so part of: sequence
location: 526515..526748
location: region:526515-526748:1
so has part: feature:526515-526748:1:exon
subclass of: SO_0000010

position:526515:1
position: 526515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526748:1
position: 526748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526515-526748:1:exon

CCS41_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02410
old locus tag: CCS41_02390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006707754.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4224 domain-containing protein
translation: MFQHDANEIISIEDLIQLTGYKIPSKQCESLHSAGIFFITRRDGRPQTTWGHFQNPLSFRHLNPIKETAAPNFGALN
SIO_010081: CCS41_RS02410
subclass of: SO_0000673
so part of: CCS41_RS02410
location: 526515..526748
location: region:526515-526748:1
so has part: feature:526515-526748:1:exon

WP_119797152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526515-526748:1:exon

CCS41_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02415
old locus tag: CCS41_02395
so part of: sequence
location: 526748..527758
location: region:526748-527758:1
so has part: feature:526748-527758:1:exon
subclass of: SO_0000010

position:527758:1
position: 527758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526748-527758:1:exon

CCS41_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02415
old locus tag: CCS41_02395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004712599.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MGRKRSKPADNWMPPRTYRGRSAYEFKPKLGGTLRLCDLTATPSQVWAAYEALLNHKQDESIFSGLVEQFFNSGDFVELAGETQKDYRKYAQNALAVFGKMSADKIKPEHIRKYMDHRGVKSRIQANREKAFISRVFRWGYERGKVKMNPCQGVKQFKEIARTRYITHKEYDALYHVSPWVVQIAMELAYLCCARQSDILALRKEHVLEEGILLQQSKTGVAQIKGWTERLRAVINQAKSLPLNTGMSSIFVIHQVSGARYTRDGFNSRWLKAKQEAKMKYPELAFDFTFHDLKAKGISDLEGTLYEKQTISGHKNVAQTARYDRKINVVPVVGGQ
SIO_010081: CCS41_RS02415
subclass of: SO_0000673
so part of: CCS41_RS02415
location: 526748..527758
location: region:526748-527758:1
so has part: feature:526748-527758:1:exon

WP_119797153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526748-527758:1:exon

CCS41_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02420
old locus tag: CCS41_02400
so part of: sequence
location: complement(527862..527948)
location: region:527862-527948:-1
so has part: feature:527862-527948:-1:exon
subclass of: SO_0000663

position:527862:-1
position: 527862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527948:-1
position: 527948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527862-527948:-1:exon

CCS41_RS02420
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS02420
old locus tag: CCS41_02400
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(527912..527914),aa:Leu,seq:taa)
SIO_010081: CCS41_RS02420
subclass of: SO_0000673
so part of: CCS41_RS02420
location: complement(527862..527948)
location: region:527862-527948:-1
so has part: feature:527862-527948:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527862-527948:-1:exon

CCS41_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02425
old locus tag: CCS41_02405
so part of: sequence
location: complement(527959..528032)
location: region:527959-528032:-1
so has part: feature:527959-528032:-1:exon
subclass of: SO_0000663

position:527959:-1
position: 527959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528032:-1
position: 528032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527959-528032:-1:exon

CCS41_RS02425
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS02425
old locus tag: CCS41_02405
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(527998..528000),aa:Cys,seq:gca)
SIO_010081: CCS41_RS02425
subclass of: SO_0000673
so part of: CCS41_RS02425
location: complement(527959..528032)
location: region:527959-528032:-1
so has part: feature:527959-528032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527959-528032:-1:exon

CCS41_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02430
old locus tag: CCS41_02410
so part of: sequence
location: complement(528107..528179)
location: region:528107-528179:-1
so has part: feature:528107-528179:-1:exon
subclass of: SO_0000663

position:528107:-1
position: 528107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528179:-1
position: 528179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528107-528179:-1:exon

CCS41_RS02430
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS02430
old locus tag: CCS41_02410
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(528144..528146),aa:Gly,seq:gcc)
SIO_010081: CCS41_RS02430
subclass of: SO_0000673
so part of: CCS41_RS02430
location: complement(528107..528179)
location: region:528107-528179:-1
so has part: feature:528107-528179:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528107-528179:-1:exon

CCS41_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02435
old locus tag: CCS41_02415
so part of: sequence
location: 528868..529335
location: region:528868-529335:1
so has part: feature:528868-529335:1:exon
subclass of: SO_0000010

position:528868:1
position: 528868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529335:1
position: 529335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528868-529335:1:exon

CCS41_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02435
old locus tag: CCS41_02415
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQSVTVCNNTESSHAYFHEKRDEWAQTVTPGARKFLGVVINKLKECLRVNAVELDLSGCDLTHLPEKLPPLVQVLKVAGNWLTHLPEKLPPSLRELDVSYNQLISLPENLPPSLKVLCVTANCLTKLPKNLPPCYRSCILTTISWMTYRKIYRAH
SIO_010081: CCS41_RS02435
subclass of: SO_0000673
so part of: CCS41_RS02435
location: 528868..529335
location: region:528868-529335:1
so has part: feature:528868-529335:1:exon

WP_205411465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528868-529335:1:exon

CCS41_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02440
old locus tag: CCS41_02420
so part of: sequence
location: 529338..529685
location: region:529338-529685:1
so has part: feature:529338-529685:1:exon
subclass of: SO_0000010

position:529338:1
position: 529338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529685:1
position: 529685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529338-529685:1:exon

CCS41_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02440
old locus tag: CCS41_02420
inference: COORDINATES: protein motif:HMM:NF025224.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNVAANCLSHLPITLPMKLTVLDLSYNEFTELPAAICTLSCISYIDISSNNISRKQIDDIFQGSHSFSRSHAKITFIIEHELPSSNPVGPLENAVKDYFWPNQISDARAFKKNN
SIO_010081: CCS41_RS02440
subclass of: SO_0000673
so part of: CCS41_RS02440
location: 529338..529685
location: region:529338-529685:1
so has part: feature:529338-529685:1:exon

WP_119797155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529338-529685:1:exon

CCS41_RS15520
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15520
old locus tag: CCS41_02425
so part of: sequence
location: complement(530244..530534)
location: region:530244-530534:-1
so has part: feature:530244-530534:-1:exon
subclass of: SO_0000010

position:530244:-1
position: 530244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530534:-1
position: 530534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530244-530534:-1:exon

CCS41_RS15520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15520
old locus tag: CCS41_02425
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFSLIAKACWPNFTGYVIAILYFNLYGVSYTYKVYHGKQLPLIIKNVHCHAKEREAGSRNLRLSPVVEKSMSDHKTLTFTVGVFAFEVDEKDILI
SIO_010081: CCS41_RS15520
subclass of: SO_0000673
so part of: CCS41_RS15520
location: complement(530244..530534)
location: region:530244-530534:-1
so has part: feature:530244-530534:-1:exon

WP_162859962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530244-530534:-1:exon

CCS41_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
alternative label: visC
gene: ubiI
locus tag: CCS41_RS02450
old locus tag: CCS41_02430
gene synonym: visC
so part of: sequence
location: complement(530669..531877)
location: region:530669-531877:-1
so has part: feature:530669-531877:-1:exon
subclass of: SO_0000010

position:530669:-1
position: 530669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531877:-1
position: 531877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530669-531877:-1:exon

CCS41_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
alternative label: visC
gene: ubiI
locus tag: CCS41_RS02450
old locus tag: CCS41_02430
gene synonym: visC
EC number: 1.14.13.240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012104673.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent 2-octaprenylphenol hydroxylase
translation: MQSFDVVISGGGMVGLALACGLQGSGLRVALLEPNPTENKLGFPLPDAPALRVSAINTASERLLQHIGVWDNILALRASPYGGMEIWDKDSFGKIAFHANEYGFSHLGHIIENRVILQALWQRASQLAHITLLVPAKLKQVAWGENEVFITLSDGRLLSARLMVGADGANSWLRQYADIPKTFWHYRHDALVATIRIEEPHQIKALQVFHGDGILAFLPFCDPHLGSIVWSLPPQRATQLSQLPIEQFNRELATTFDMRLGRCQLESERQTFPLIGHYARSFAAHRLVLVGDAAHGIHPLAGQGVNLGFMDVVELIFELNRLYRRGKDIGQHLCLRRYERRRKHSAALMLANMQGFRELFAGNNPLQKWLRDIGLSLTDKLPGVKLKLLRRAMGLDDIPDWL
SIO_010081: CCS41_RS02450
subclass of: SO_0000673
so part of: CCS41_RS02450
location: complement(530669..531877)
location: region:530669-531877:-1
so has part: feature:530669-531877:-1:exon

WP_072551068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530669-531877:-1:exon

CCS41_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
alternative label: visB
gene: ubiH
locus tag: CCS41_RS02455
old locus tag: CCS41_02435
gene synonym: visB
so part of: sequence
location: complement(531881..533059)
location: region:531881-533059:-1
so has part: feature:531881-533059:-1:exon
subclass of: SO_0000010

position:531881:-1
position: 531881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533059:-1
position: 533059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531881-533059:-1:exon

CCS41_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
alternative label: visB
gene: ubiH
locus tag: CCS41_RS02455
old locus tag: CCS41_02435
gene synonym: visB
EC number: 1.14.13.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209951.1
GO function: GO:0008681 - 2-octaprenyl-6-methoxyphenol hydroxylase activity [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]; GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-octaprenyl-6-methoxyphenyl hydroxylase
translation: MSIIIVGAGMAGATLALAISSLTGGKIPISLVEALSPNAMQHPGFDARAIALAQGTCQQLTRLGIWSALADCATAISRIQVSDRGHLGSVNLRAKDYFVPTLGNVVELHDVGKRLFALLEQAQGVNLYCPAKVVNVVRTQETASVTLDNGQQLTGKLLVAADGSYSQLAGGCHIHWQQQDYQQIAVIANITTAEDPAGRAFERFTRSGPLALLPMSQQRCSLVWCHALQDREQVDRWHDARFLSELQQAFGWRLGKILQVGKRHSYPLHLLTASRHISHRLALVGNAAQTLHPIAGQGFNLALRDVISLAETLAEAARHSADLGAYQILSQYESRRQKDQQATIGVTDGLIHLFANDYCPLVIGRNLGLMVMEQMPTMRDAFVRRALGWSQG
SIO_010081: CCS41_RS02455
subclass of: SO_0000673
so part of: CCS41_RS02455
location: complement(531881..533059)
location: region:531881-533059:-1
so has part: feature:531881-533059:-1:exon

WP_072551069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531881-533059:-1:exon

CCS41_RS16315
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: pepP
locus tag: CCS41_RS16315
so part of: sequence
location: complement(533063..534376)
location: region:533063-534376:-1
so has part: feature:533063-534376:-1:exon
subclass of: SO_0000010

position:533063:-1
position: 533063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534376:-1
position: 534376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533063-534376:-1:exon

CCS41_RS16315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: pepP
locus tag: CCS41_RS16315
EC number: 3.4.11.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011192964.1
GO function: GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Xaa-Pro aminopeptidase
translation: MIQQKYQQRRKTLLAKMPISSVAVIFSAPQVTRNADCEYPYRQDSNFRYLTGFNEPEAVLVLVKKSEIDTESVLFNRKQDPIAEIWSGRRLGQTAALEQLGIDRALPFDEISEQLYLLLNGVDVVYHAQGQYAYADHILSTTLERLRLGLSKNLRAPATLTDWRPWLHEMRLFKSSEEIAVMRRACEISAGAHTRAMKICRPGLFEYQLEGEIHHEFTRHGARYPAYGTIVGSGDNGCILHYTENKSKLRDGDLVLIDAGCEYQGYAADITRTFPVNGKFSPPQRAIYDIVLASINKALQLFRPGISIHDVNQEVIKLMINRLLDLGILQGNAEELLAKQAHRSFFMHGLSHWLGMDVHDVGNYCSPEKNRILEVGMLLTVEPGLYIAPNAQVPAEYRGIGIRIEDDILITENGNENLTASVVKETGAIEALMAAKN
SIO_010081: CCS41_RS16315
subclass of: SO_0000673
so part of: CCS41_RS16315
location: complement(533063..534376)
location: region:533063-534376:-1
so has part: feature:533063-534376:-1:exon

WP_072551073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533063-534376:-1:exon

CCS41_RS16320
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
gene: folD
locus tag: CCS41_RS16320
pseudo: true
so part of: sequence
location: complement(<534428..535261)
location: region:534428-535261:-1
so has part: feature:534428-535261:-1:exon
subclass of: SO_0000010

position:534428:-1
position: 534428
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:535261:-1
position: 535261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534428-535261:-1:exon

CCS41_RS16320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
gene: folD
locus tag: CCS41_RS16320
inference: COORDINATES: protein motif:HMM:NF008058.0
GO function: GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
SIO_010081: CCS41_RS16320
subclass of: SO_0000673
so part of: CCS41_RS16320
location: complement(<534428..535261)
location: region:534428-535261:-1
so has part: feature:534428-535261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534428-535261:-1:exon

CCS41_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02465
old locus tag: CCS41_02445
so part of: sequence
location: 535476..535552
location: region:535476-535552:1
so has part: feature:535476-535552:1:exon
subclass of: SO_0000663

position:535476:1
position: 535476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535552:1
position: 535552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535476-535552:1:exon

CCS41_RS02465
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1878942
locus tag: CCS41_RS02465
old locus tag: CCS41_02445
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:535510..535512,aa:Arg,seq:tct)
SIO_010081: CCS41_RS02465
subclass of: SO_0000673
so part of: CCS41_RS02465
location: 535476..535552
location: region:535476-535552:1
so has part: feature:535476-535552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535476-535552:1:exon

CCS41_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02470
old locus tag: CCS41_02450
pseudo: true
so part of: sequence
location: complement(535585..536729)
location: region:535585-536729:-1
so has part: feature:535585-536729:-1:exon
subclass of: SO_0000010

position:535585:-1
position: 535585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536729:-1
position: 536729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535585-536729:-1:exon

CCS41_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02470
old locus tag: CCS41_02450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007864647.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: site-specific integrase
SIO_010081: CCS41_RS02470
subclass of: SO_0000673
so part of: CCS41_RS02470
location: complement(535585..536729)
location: region:535585-536729:-1
so has part: feature:535585-536729:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535585-536729:-1:exon

CCS41_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02480
old locus tag: CCS41_02460
so part of: sequence
location: complement(537198..537395)
location: region:537198-537395:-1
so has part: feature:537198-537395:-1:exon
subclass of: SO_0000010

position:537198:-1
position: 537198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537395:-1
position: 537395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537198-537395:-1:exon

CCS41_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02480
old locus tag: CCS41_02460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQDVMKEPSEMIYIGAALHQALETFAASVSAHCGYSITAAHFTQYLIDHYGEIAKDTIIATLKN
SIO_010081: CCS41_RS02480
subclass of: SO_0000673
so part of: CCS41_RS02480
location: complement(537198..537395)
location: region:537198-537395:-1
so has part: feature:537198-537395:-1:exon

WP_072551072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537198-537395:-1:exon

CCS41_RS15525
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15525
so part of: sequence
location: complement(537499..537642)
location: region:537499-537642:-1
so has part: feature:537499-537642:-1:exon
subclass of: SO_0000010

position:537499:-1
position: 537499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537642:-1
position: 537642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537499-537642:-1:exon

CCS41_RS15525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNRQSRARKRELKDKVLEAKRNEKKNWFNRLRSWFKKRKKPKHRLP
SIO_010081: CCS41_RS15525
subclass of: SO_0000673
so part of: CCS41_RS15525
location: complement(537499..537642)
location: region:537499-537642:-1
so has part: feature:537499-537642:-1:exon

WP_162859963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537499-537642:-1:exon

CCS41_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02485
old locus tag: CCS41_02465
so part of: sequence
location: complement(537654..538355)
location: region:537654-538355:-1
so has part: feature:537654-538355:-1:exon
subclass of: SO_0000010

position:537654:-1
position: 537654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538355:-1
position: 538355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537654-538355:-1:exon

CCS41_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02485
old locus tag: CCS41_02465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MELGQMMKKIAKVSRSLPLTAMMENSQDVWGIKDSDSRFIYTNRAFFDFYNVPQGFDVIGRRDDELPTCIAEFSLITQKLEREVIKSGQKITLIKTHFFGREQKMQPYLYETFPLYNKRKKCIGTVFYGRKLAMISLLHYVDKLTDTLLLEPPSNLFTQSELRIIFYLLRTMSAKEIGKKLARSHRTIENRIRILYQKTKVHSLRDFKHFCHKTGFDRTVPQAFIHPGIQFIE
SIO_010081: CCS41_RS02485
subclass of: SO_0000673
so part of: CCS41_RS02485
location: complement(537654..538355)
location: region:537654-538355:-1
so has part: feature:537654-538355:-1:exon

WP_240313818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537654-538355:-1:exon

CCS41_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02490
old locus tag: CCS41_02470
so part of: sequence
location: complement(538492..538758)
location: region:538492-538758:-1
so has part: feature:538492-538758:-1:exon
subclass of: SO_0000010

position:538492:-1
position: 538492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538758:-1
position: 538758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538492-538758:-1:exon

CCS41_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02490
old locus tag: CCS41_02470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MAHLDITQFPELREVFPELTPVQFETAMLFALGVSQKDIALLRSVSYPAVKQTLASAKLKFEPYSLHGLFTVFHVRLALFALKGCRKR
SIO_010081: CCS41_RS02490
subclass of: SO_0000673
so part of: CCS41_RS02490
location: complement(538492..538758)
location: region:538492-538758:-1
so has part: feature:538492-538758:-1:exon

WP_119797156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538492-538758:-1:exon

CCS41_RS15955
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15955
so part of: sequence
location: complement(538927..539355)
location: region:538927-539355:-1
so has part: feature:538927-539355:-1:exon
subclass of: SO_0000010

position:538927:-1
position: 538927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539355:-1
position: 539355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538927-539355:-1:exon

CCS41_RS15955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15955
inference: COORDINATES: protein motif:HMM:NF015340.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage antirepressor KilAC domain-containing protein
translation: MAWAEQFREKTRLALVNKEQEAELHELKNLFKEGITTTQFCKMLNGINTQQINHCLAERNWLYNESKSHTRWRATSYARDRYLTEHQHKISIHSGDDFIKYQPVLLRKGAIRLFDLYRKNKLPMKTHWDGQFTHAKELNIAS
SIO_010081: CCS41_RS15955
subclass of: SO_0000673
so part of: CCS41_RS15955
location: complement(538927..539355)
location: region:538927-539355:-1
so has part: feature:538927-539355:-1:exon

WP_205411466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538927-539355:-1:exon

CCS41_RS15960
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15960
so part of: sequence
location: complement(539316..539690)
location: region:539316-539690:-1
so has part: feature:539316-539690:-1:exon
subclass of: SO_0000010

position:539316:-1
position: 539316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539690:-1
position: 539690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539316-539690:-1:exon

CCS41_RS15960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15960
inference: COORDINATES: protein motif:HMM:NF021206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
translation: MSNVITIYQQVKMSSREIARLTGKRHDHVLVDCRKMFESLNIQSPEFSGDYKDTNGRTYQEYLLDQDLTMTLVMGYSIPLRHKVATRWRELEEKATRPVCILPNFEDPLLRLWHGQSSFAKKPG
SIO_010081: CCS41_RS15960
subclass of: SO_0000673
so part of: CCS41_RS15960
location: complement(539316..539690)
location: region:539316-539690:-1
so has part: feature:539316-539690:-1:exon

WP_240313819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539316-539690:-1:exon

CCS41_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02500
old locus tag: CCS41_02480
so part of: sequence
location: complement(539960..540166)
location: region:539960-540166:-1
so has part: feature:539960-540166:-1:exon
subclass of: SO_0000010

position:539960:-1
position: 539960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540166:-1
position: 540166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539960-540166:-1:exon

CCS41_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02500
old locus tag: CCS41_02480
inference: COORDINATES: protein motif:HMM:NF022018.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ORF6N domain-containing protein
translation: MPNIIDIHQQAPLSPENLPVIIYHHKRVITTELLAQGYGTDSNNIQQNFKRNKERFIESKHYSRGHVT
SIO_010081: CCS41_RS02500
subclass of: SO_0000673
so part of: CCS41_RS02500
location: complement(539960..540166)
location: region:539960-540166:-1
so has part: feature:539960-540166:-1:exon

WP_119797157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539960-540166:-1:exon

CCS41_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02505
old locus tag: CCS41_02485
pseudo: true
so part of: sequence
location: complement(540532..541351)
location: region:540532-541351:-1
so has part: feature:540532-541351:-1:exon
subclass of: SO_0000010

position:540532:-1
position: 540532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541351:-1
position: 541351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540532-541351:-1:exon

CCS41_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02505
old locus tag: CCS41_02485
inference: COORDINATES: protein motif:HMM:NF016629.2
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
SIO_010081: CCS41_RS02505
subclass of: SO_0000673
so part of: CCS41_RS02505
location: complement(540532..541351)
location: region:540532-541351:-1
so has part: feature:540532-541351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:540532-541351:-1:exon

CCS41_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02510
old locus tag: CCS41_02490
so part of: sequence
location: complement(541590..542081)
location: region:541590-542081:-1
so has part: feature:541590-542081:-1:exon
subclass of: SO_0000010

position:541590:-1
position: 541590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542081:-1
position: 542081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541590-542081:-1:exon

CCS41_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02510
old locus tag: CCS41_02490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015874325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaJ viral recombinase family protein
translation: MEQRTEAWFAARCGKVTASKLAEVMAKVKTGDAATRKKYRAELICQRLTGKRGDTFVTPEMKHGTALEPVAREAYILREFAVEVTEVGLVDHPTIEGFAASPDGLVNEDGLIEIKCPRTWTHLKTIRTGVLEKNTSCKCTRKCCVRGVDGVTLSVMIIDCLTH
SIO_010081: CCS41_RS02510
subclass of: SO_0000673
so part of: CCS41_RS02510
location: complement(541590..542081)
location: region:541590-542081:-1
so has part: feature:541590-542081:-1:exon

WP_240313820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541590-542081:-1:exon

CCS41_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02515
old locus tag: CCS41_02495
so part of: sequence
location: complement(542234..542920)
location: region:542234-542920:-1
so has part: feature:542234-542920:-1:exon
subclass of: SO_0000010

position:542234:-1
position: 542234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542920:-1
position: 542920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542234-542920:-1:exon

CCS41_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02515
old locus tag: CCS41_02495
inference: COORDINATES: protein motif:HMM:NF019984.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron maturase-specific domain-containing protein
translation: MAEVCQIVCGVISPLLANLYLHWLDSTWEKKAFGKRPHDAHIVRYADDFVILCSKRPEFYLDQAKKVLDRLGLTLNAKKTRIVNAMKEPFDFLGHRFAVQPSKVTGELKTFYYPTPKAMKSVKQKIRDVVRKGQHWDWPTLVKEKVNPILRGWGNYFKTGNSRKHFLSIANYTIWTLCIMLRKKHKKRGKGWRDHPPSWFYDYHGLFKLYSLSVTGDEGSRYARPVPS
SIO_010081: CCS41_RS02515
subclass of: SO_0000673
so part of: CCS41_RS02515
location: complement(542234..542920)
location: region:542234-542920:-1
so has part: feature:542234-542920:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:542234-542920:-1:exon

CCS41_RS15965
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15965
so part of: sequence
location: complement(542868..543425)
location: region:542868-543425:-1
so has part: feature:542868-543425:-1:exon
subclass of: SO_0000010

position:542868:-1
position: 542868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543425:-1
position: 543425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542868-543425:-1:exon

CCS41_RS15965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDETVWAQVIALLSEPERLKKEYEQRLTQASEHSGQTADAERLKKQENQLNVGRSRLIDSFAEGLIGKTDFEPRIRVMTLRLAELARQRVKVKQATENQHELLLLVNRVEDFAAAVTERLSTDDFLMKREILRALVKRIEIYRDEIVVVFRVNPGNDTSLEAGSDKTYGRSLPDCLRSNFSLAR
SIO_010081: CCS41_RS15965
subclass of: SO_0000673
so part of: CCS41_RS15965
location: complement(542868..543425)
location: region:542868-543425:-1
so has part: feature:542868-543425:-1:exon

WP_205411467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542868-543425:-1:exon

CCS41_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02520
old locus tag: CCS41_02500
so part of: sequence
location: complement(543365..544546)
location: region:543365-544546:-1
so has part: feature:543365-544546:-1:exon
subclass of: SO_0000010

position:543365:-1
position: 543365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544546:-1
position: 544546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543365-544546:-1:exon

CCS41_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02520
old locus tag: CCS41_02500
inference: COORDINATES: protein motif:HMM:NF012464.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MNKALVALYARVSSGQQVKNGTIGSQLAAIKDRIREDGHVLPDAMLFIDDGVSGATLIRPQLERLRDYAAAGDIECLYILSPDRLARKYAYQALLMEEFSACGVEVIFICHTPGDTPEDMMLLQMQGMFAEYERAKIMERNRRGKLHGARCGNVGVLSGAPYGYRYIRRQPDGTPAQYIVNLHEASVVRKIFSWAGIERLSLGGVVRRLAEKGIESATGKPGWDRSTVWGMLKNPAYKGLAVFGKTKNCAPRPRVRAARNSADILKNGYSVIRSKPDDGIGIPVPAIINSALFLTVNEQLEENRRHARQGRRGAAYLLQGLTVCGHCRYAYYGKKVSKSAAKGGAQYSYYHCTGTDAYRFGAFGCVTINRSGHPCWMKRSGHRSLRCCLSRNG
SIO_010081: CCS41_RS02520
subclass of: SO_0000673
so part of: CCS41_RS02520
location: complement(543365..544546)
location: region:543365-544546:-1
so has part: feature:543365-544546:-1:exon

WP_205411468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543365-544546:-1:exon

CCS41_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02530
old locus tag: CCS41_02510
so part of: sequence
location: 544722..545540
location: region:544722-545540:1
so has part: feature:544722-545540:1:exon
subclass of: SO_0000010

position:544722:1
position: 544722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545540:1
position: 545540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544722-545540:1:exon

CCS41_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02530
old locus tag: CCS41_02510
inference: COORDINATES: protein motif:HMM:NF012307.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron maturase-specific domain-containing protein
translation: MASVSLLRVTPCAVISLNNEGKLSDAPIRMTRLEAAPVKTQAPAYAKVCTIVCGVISPLLANLYLHWLDSTWEKKAFGKRPHDAHIVRYADDFVILCSKRPEFYLDQAKKVLDRLGLTLNAKKTRIVNAMKEPFDFLGHRFAVQPSKVTGELKTFYYPTPKAMKSVKQKIRDVVRKGQHWDWPTLVKEKVNPILRGWGNYFKTGNSRKHFLSIANYTIWTLCIMLRKKHKKRGKGWRDHPPSWFYDYHGLFKLYSLSVTGDEGSRYARPVPS
SIO_010081: CCS41_RS02530
subclass of: SO_0000673
so part of: CCS41_RS02530
location: 544722..545540
location: region:544722-545540:1
so has part: feature:544722-545540:1:exon

WP_119797158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544722-545540:1:exon

CCS41_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02535
old locus tag: CCS41_02515
so part of: sequence
location: 545691..546311
location: region:545691-546311:1
so has part: feature:545691-546311:1:exon
subclass of: SO_0000010

position:545691:1
position: 545691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546311:1
position: 546311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545691-546311:1:exon

CCS41_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02535
old locus tag: CCS41_02515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704143.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaJ viral recombinase family protein
translation: MEQRTEAWFAARSGKVTASKLAEVMAKVKTGDAATRKKYRAELICQRLTGKREDTFVTLDMKHGTALEPVAREAYILREFAVEVTEVGLVDHPTIEGFAASPDGLVNDDGLIEIKCPKTWTHLKTIRTGEPEKKYRLQMHAQMLCTGRRWCDFVSYDNRLPDTLAYFKKRIHFDEALGKEIETEVRKFLQELEDEIEQIKTYGKVA
SIO_010081: CCS41_RS02535
subclass of: SO_0000673
so part of: CCS41_RS02535
location: 545691..546311
location: region:545691-546311:1
so has part: feature:545691-546311:1:exon

WP_119797706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545691-546311:1:exon

CCS41_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02540
old locus tag: CCS41_02520
so part of: sequence
location: 546423..547343
location: region:546423-547343:1
so has part: feature:546423-547343:1:exon
subclass of: SO_0000010

position:546423:1
position: 546423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547343:1
position: 547343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546423-547343:1:exon

CCS41_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02540
old locus tag: CCS41_02520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410598.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MPQVPNPHDATFRKCMSNVNVARDFLQFHLPPEIKEQCDFSTLKIEPGSFIEPNLRQHYSDIVYSLKTKEGKRCYIHCLIEHQSTPKKLMAFRLFRYSIPIMQQHLDQGHDELPVVIPILFYHGETSPYPYSMDWLDCFADRDLAQRVYSQPFPLVDVTTIPDEEILTHRSVALLELVQKHIYARDIIVISQSIAHLLNTGYTESELVKTLMYYIAQRGKTADTPQFFKTIVEHAPTYSEDIMTIAQDLRREGREEGMQQGMQQGRQETKLEIAKQLLKSGVDSALVKTSTGLSDRDIEDIEVLLH
SIO_010081: CCS41_RS02540
subclass of: SO_0000673
so part of: CCS41_RS02540
location: 546423..547343
location: region:546423-547343:1
so has part: feature:546423-547343:1:exon

WP_119797159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546423-547343:1:exon

CCS41_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02545
old locus tag: CCS41_02525
so part of: sequence
location: 547710..548474
location: region:547710-548474:1
so has part: feature:547710-548474:1:exon
subclass of: SO_0000010

position:547710:1
position: 547710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548474:1
position: 548474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547710-548474:1:exon

CCS41_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02545
old locus tag: CCS41_02525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410601.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
translation: MSNVITIYQQVKMSSREIARLTGKQHKDVLYDCRKMFEVLTIQSADFSADYKDASGRTYQEYLLDQDLTMTLVMGYSIPLRHKVATRWRELEEKATRPVCILPNFEDPPVAAMAWAEQFREKTRLALVNKEQEAELHELKNLFKEGITTTQFCKMLNGINTQQINHCLAERNWLYNESKSHTRWRATSYARDRYLTEHQHKISIHSGDDFIKYQPVLLRKGAIRLFDLYRKNKLPMKTHWDGQFTHAKELNIAS
SIO_010081: CCS41_RS02545
subclass of: SO_0000673
so part of: CCS41_RS02545
location: 547710..548474
location: region:547710-548474:1
so has part: feature:547710-548474:1:exon

WP_119797160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547710-548474:1:exon

CCS41_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02550
old locus tag: CCS41_02530
so part of: sequence
location: 548643..548909
location: region:548643-548909:1
so has part: feature:548643-548909:1:exon
subclass of: SO_0000010

position:548643:1
position: 548643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548909:1
position: 548909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548643-548909:1:exon

CCS41_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02550
old locus tag: CCS41_02530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MAHLDITQFPELREVFPELTPVQFETAMLFALGVSQKDIALLRSVSYPAVKQTLASAKLKFEPYSLHGLFTVFHVRLALFALKGCRKR
SIO_010081: CCS41_RS02550
subclass of: SO_0000673
so part of: CCS41_RS02550
location: 548643..548909
location: region:548643-548909:1
so has part: feature:548643-548909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548643-548909:1:exon

CCS41_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02555
old locus tag: CCS41_02535
so part of: sequence
location: 549046..549747
location: region:549046-549747:1
so has part: feature:549046-549747:1:exon
subclass of: SO_0000010

position:549046:1
position: 549046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549747:1
position: 549747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549046-549747:1:exon

CCS41_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02555
old locus tag: CCS41_02535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MELGQMMKKIAKVSRSLPLTAMMENSQDVWGIKDSDSRFIYTNRAFFDFYNVPQGFDVIGRRDDELPTCIAEFSLITQKLEREVIKSGQKITLIKTHFFGREQKMQPYLYETFPLYNKRKKCIGTVFYGRKLAMISLLHYVDKLTDTLLLEPPSNLFTQSELRIIFYLLRTMSAKEIGKKLARSHRTIENRIRILYQKTKVHSLRDFKHFCHKTGFDRTVPQAFIHPGIQFIE
SIO_010081: CCS41_RS02555
subclass of: SO_0000673
so part of: CCS41_RS02555
location: 549046..549747
location: region:549046-549747:1
so has part: feature:549046-549747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549046-549747:1:exon

CCS41_RS15970
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15970
old locus tag: CCS41_02540
so part of: sequence
location: 549759..549938
location: region:549759-549938:1
so has part: feature:549759-549938:1:exon
subclass of: SO_0000010

position:549759:1
position: 549759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549938:1
position: 549938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549759-549938:1:exon

CCS41_RS15970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15970
old locus tag: CCS41_02540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNRQSRARKRELKDKVLEAKRNEKKNWFNRLRSWFKTKKSLNIDCHNILYSVIYIRFL
SIO_010081: CCS41_RS15970
subclass of: SO_0000673
so part of: CCS41_RS15970
location: 549759..549938
location: region:549759-549938:1
so has part: feature:549759-549938:1:exon

WP_119797161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549759-549938:1:exon

CCS41_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02565
old locus tag: CCS41_02545
so part of: sequence
location: 550231..550926
location: region:550231-550926:1
so has part: feature:550231-550926:1:exon
subclass of: SO_0000010

position:550231:1
position: 550231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550926:1
position: 550926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550231-550926:1:exon

CCS41_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02565
old locus tag: CCS41_02545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFATGASSATFSPITSSTVSEPAQIDPIKKRLDTLIQGKYVLVFSGFSGSAGYADPELFTNKLKSILQNAVKEHGYNNLLVVAGATSSGIGEVYKIAEEMEIRTLGIVSEQAKKHPKDISPSCNDVVYIPDPENNWKVLYEEKEEKKSYMVYVCKDKGEFYALGGGDVAVSELIEAESSGIKTTVLKFDRHPTDTESILKKNPEADPHPVNTYYDNEIKERPMSDLSIKYA
SIO_010081: CCS41_RS02565
subclass of: SO_0000673
so part of: CCS41_RS02565
location: 550231..550926
location: region:550231-550926:1
so has part: feature:550231-550926:1:exon

WP_119963794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550231-550926:1:exon

CCS41_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02575
old locus tag: CCS41_02555
pseudo: true
so part of: sequence
location: 551536..>552198
location: region:551536-552198:1
so has part: feature:551536-552198:1:exon
subclass of: SO_0000010

position:551536:1
position: 551536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552198:1
position: 552198
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551536-552198:1:exon

CCS41_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02575
old locus tag: CCS41_02555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016042158.1
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase
SIO_010081: CCS41_RS02575
subclass of: SO_0000673
so part of: CCS41_RS02575
location: 551536..>552198
location: region:551536-552198:1
so has part: feature:551536-552198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:551536-552198:1:exon

CCS41_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02580
old locus tag: CCS41_02560
so part of: sequence
location: complement(552221..553044)
location: region:552221-553044:-1
so has part: feature:552221-553044:-1:exon
subclass of: SO_0000010

position:552221:-1
position: 552221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553044:-1
position: 553044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552221-553044:-1:exon

CCS41_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02580
old locus tag: CCS41_02560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041621276.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKYEQIKVLEEEKFRRLTGVKRSTFEKVIKILNEADKCKQGKGGRKPKLGLEDRLLMALEYLREYRTYFHVSRSDGVSESTCYETIKWIENTLIKHPDFALPGRKALLKSDREYELVLIDATETPIERPPKKQKQFYSGKKKRPTLKTQVIVDKKSKAVICTSFTHGRRHDFRLFKESGVRIHPEIKTVTDTGYQGLGKIHSNSALPKKKTKKNPLTKEDKRNNRELSSQRVLNENVIGMIKRFKIVSDRYRNRRKRFGLRFNLIAAIYNMEIR
SIO_010081: CCS41_RS02580
subclass of: SO_0000673
so part of: CCS41_RS02580
location: complement(join(552221..552657,552657..553044))
location: region:552221-553044:-1
so has part: feature:552657-553044:-1:exon
so has part: feature:552221-552657:-1:exon

WP_240313821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552657-553044:-1:exon

position:552657:-1
position: 552657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:552221-552657:-1:exon

CCS41_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02585
old locus tag: CCS41_02565
pseudo: true
so part of: sequence
location: <553203..553712
location: region:553203-553712:1
so has part: feature:553203-553712:1:exon
subclass of: SO_0000010

position:553203:1
position: 553203
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:553712:1
position: 553712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553203-553712:1:exon

CCS41_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02585
old locus tag: CCS41_02565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012304459.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: site-specific integrase
SIO_010081: CCS41_RS02585
subclass of: SO_0000673
so part of: CCS41_RS02585
location: <553203..553712
location: region:553203-553712:1
so has part: feature:553203-553712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553203-553712:1:exon

CCS41_RS16325
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16325
pseudo: true
so part of: sequence
location: <554078..554683
location: region:554078-554683:1
so has part: feature:554078-554683:1:exon
subclass of: SO_0000010

position:554078:1
position: 554078
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:554683:1
position: 554683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554078-554683:1:exon

CCS41_RS16325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611212.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1 family transposase
SIO_010081: CCS41_RS16325
subclass of: SO_0000673
so part of: CCS41_RS16325
location: <554078..554683
location: region:554078-554683:1
so has part: feature:554078-554683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:554078-554683:1:exon

CCS41_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02600
old locus tag: CCS41_02585
pseudo: true
so part of: sequence
location: 554957..555980
location: region:554957-555980:1
so has part: feature:554957-555980:1:exon
subclass of: SO_0000010

position:554957:1
position: 554957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555980:1
position: 555980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554957-555980:1:exon

CCS41_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02600
old locus tag: CCS41_02585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: CCS41_RS02600
subclass of: SO_0000673
so part of: CCS41_RS02600
location: 554957..555980
location: region:554957-555980:1
so has part: feature:554957-555980:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:554957-555980:1:exon

CCS41_RS16330
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16330
so part of: sequence
location: 555987..556151
location: region:555987-556151:1
so has part: feature:555987-556151:1:exon
subclass of: SO_0000010

position:555987:1
position: 555987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556151:1
position: 556151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555987-556151:1:exon

CCS41_RS16330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGIAIKKTFYHPKANVQSREDFQVKIQAYEASETPIIYVDKSGFAHEMPRLYGY
SIO_010081: CCS41_RS16330
subclass of: SO_0000673
so part of: CCS41_RS16330
location: 555987..556151
location: region:555987-556151:1
so has part: feature:555987-556151:1:exon

WP_240313822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555987-556151:1:exon

CCS41_RS17040
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS17040
so part of: sequence
location: complement(556236..556493)
location: region:556236-556493:-1
so has part: feature:556236-556493:-1:exon
subclass of: SO_0000010

position:556236:-1
position: 556236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556493:-1
position: 556493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556236-556493:-1:exon

CCS41_RS17040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS17040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFPTKGFSLSPFVLNWVEVRRIRREIFQNKTGFLSSRLYILAFVKAHIIHHDDSPLRDFWQSVLGYPRITNIAIDIIFKGTNGG
SIO_010081: CCS41_RS17040
subclass of: SO_0000673
so part of: CCS41_RS17040
location: complement(556236..556493)
location: region:556236-556493:-1
so has part: feature:556236-556493:-1:exon

WP_275887675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556236-556493:-1:exon

CCS41_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02610
old locus tag: CCS41_02595
so part of: sequence
location: complement(556534..556851)
location: region:556534-556851:-1
so has part: feature:556534-556851:-1:exon
subclass of: SO_0000010

position:556534:-1
position: 556534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556851:-1
position: 556851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556534-556851:-1:exon

CCS41_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02610
old locus tag: CCS41_02595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEIATISLRVDTSNLEKGDRALEHFGDTAARTAAQADNINTSFTPATRTLNAFGHQTSQATHSLQQQRDELHRLLGKIHPVTAAFGKLDEMEAQLRRYGCSRIN
SIO_010081: CCS41_RS02610
subclass of: SO_0000673
so part of: CCS41_RS02610
location: complement(556534..556851)
location: region:556534-556851:-1
so has part: feature:556534-556851:-1:exon

WP_072551180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556534-556851:-1:exon

CCS41_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02615
old locus tag: CCS41_02600
so part of: sequence
location: complement(556848..557129)
location: region:556848-557129:-1
so has part: feature:556848-557129:-1:exon
subclass of: SO_0000010

position:556848:-1
position: 556848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557129:-1
position: 557129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556848-557129:-1:exon

CCS41_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02615
old locus tag: CCS41_02600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006707583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1799 domain-containing protein
translation: MPCAEELASAGLRPEDFAPQPLEIWPDIWPSFLVMRAMSTQWRTGMAGPTGLDYGCLPQVMTLLGVEPHATVFDDIRTLESIALSLIHSRSAT
SIO_010081: CCS41_RS02615
subclass of: SO_0000673
so part of: CCS41_RS02615
location: complement(556848..557129)
location: region:556848-557129:-1
so has part: feature:556848-557129:-1:exon

WP_240313823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556848-557129:-1:exon

CCS41_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02620
old locus tag: CCS41_02605
so part of: sequence
location: complement(557159..557470)
location: region:557159-557470:-1
so has part: feature:557159-557470:-1:exon
subclass of: SO_0000010

position:557159:-1
position: 557159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557470:-1
position: 557470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557159-557470:-1:exon

CCS41_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02620
old locus tag: CCS41_02605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211712.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail assembly chaperone
translation: MSIEFTLQPQPRFKADVAIPRAGLEAGIVTFTFKHVPLNEMAEREKRKNQTGLDFVEHITAAWALPDELNRDNLTKLANNYPQAIEAIIHTFYRELLGQREKN
SIO_010081: CCS41_RS02620
subclass of: SO_0000673
so part of: CCS41_RS02620
location: complement(557159..557470)
location: region:557159-557470:-1
so has part: feature:557159-557470:-1:exon

WP_072551181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557159-557470:-1:exon

CCS41_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02625
old locus tag: CCS41_02610
so part of: sequence
location: complement(557482..558114)
location: region:557482-558114:-1
so has part: feature:557482-558114:-1:exon
subclass of: SO_0000010

position:557482:-1
position: 557482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558114:-1
position: 558114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557482-558114:-1:exon

CCS41_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02625
old locus tag: CCS41_02610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706623.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MYLASDYETALPFTAITNAAHAVLTVVGNDKIKKDDLVHLSSGWTGLNERVARVSAATATSITLENIDTRQSAQFVAGGGAGSLRKIKIWTEIPQIKEVASSGGDQQTVSLQFLSDTVQRNINTVKAPRTLTYTLGHDPALAIYPLLRETDQRQDVVAFSMFVPQAKEKRYWSATVAFNEVPHTEVNAVETVSLVLNMQSPAMTFYKEPA
SIO_010081: CCS41_RS02625
subclass of: SO_0000673
so part of: CCS41_RS02625
location: complement(557482..558114)
location: region:557482-558114:-1
so has part: feature:557482-558114:-1:exon

WP_240313824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557482-558114:-1:exon

CCS41_RS16340
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16340
so part of: sequence
location: 558344..558499
location: region:558344-558499:1
so has part: feature:558344-558499:1:exon
subclass of: SO_0000010

position:558344:1
position: 558344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558499:1
position: 558499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558344-558499:1:exon

CCS41_RS16340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHVTIHLGGSRSDHMRPIAQTEGQTVGVTVNDTRKHRGDAGDSTTDNAIG
SIO_010081: CCS41_RS16340
subclass of: SO_0000673
so part of: CCS41_RS16340
location: 558344..558499
location: region:558344-558499:1
so has part: feature:558344-558499:1:exon

WP_240313825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558344-558499:1:exon

CCS41_RS16345
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16345
so part of: sequence
location: complement(558534..558749)
location: region:558534-558749:-1
so has part: feature:558534-558749:-1:exon
subclass of: SO_0000010

position:558534:-1
position: 558534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558749:-1
position: 558749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558534-558749:-1:exon

CCS41_RS16345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16345
inference: COORDINATES: protein motif:HMM:NF024943.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail terminator-like protein
translation: MSTWAAKKGVSVASQNVQFSDTGSLYLQSHLLPASTECLDLAQVSRVYHGVYQMTLCAPMGSGQASGTGYR
SIO_010081: CCS41_RS16345
subclass of: SO_0000673
so part of: CCS41_RS16345
location: complement(558534..558749)
location: region:558534-558749:-1
so has part: feature:558534-558749:-1:exon

WP_240313826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558534-558749:-1:exon

CCS41_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02635
old locus tag: CCS41_02620
pseudo: true
so part of: sequence
location: complement(558774..559228)
location: region:558774-559228:-1
so has part: feature:558774-559228:-1:exon
subclass of: SO_0000010

position:558774:-1
position: 558774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559228:-1
position: 559228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558774-559228:-1:exon

CCS41_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02635
old locus tag: CCS41_02620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017693492.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: CCS41_RS02635
subclass of: SO_0000673
so part of: CCS41_RS02635
location: complement(558774..559228)
location: region:558774-559228:-1
so has part: feature:558774-559228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558774-559228:-1:exon

CCS41_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02640
old locus tag: CCS41_02625
so part of: sequence
location: complement(559230..559580)
location: region:559230-559580:-1
so has part: feature:559230-559580:-1:exon
subclass of: SO_0000010

position:559230:-1
position: 559230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559580:-1
position: 559580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559230-559580:-1:exon

CCS41_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02640
old locus tag: CCS41_02625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211716.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAINYAGLRHTADRLLRDNGAPYTLQRGGGVQVIKGVEVAVPRENHRLTGVITRYTTGEIDGTLIQQGDIKMFATAETEIRQGDHLLIEGKAHRVIQVTPVKPATLLLCYQLQLRA
SIO_010081: CCS41_RS02640
subclass of: SO_0000673
so part of: CCS41_RS02640
location: complement(559230..559580)
location: region:559230-559580:-1
so has part: feature:559230-559580:-1:exon

WP_072551136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559230-559580:-1:exon

CCS41_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02645
old locus tag: CCS41_02630
so part of: sequence
location: complement(559585..560064)
location: region:559585-560064:-1
so has part: feature:559585-560064:-1:exon
subclass of: SO_0000010

position:559585:-1
position: 559585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560064:-1
position: 560064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559585-560064:-1:exon

CCS41_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02645
old locus tag: CCS41_02630
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLITDINSPERESYARVADLRRLANKRGEPLPEEDAACETLLIKAMDYLAGLNWQGERTTASQPLAWPRSGVIFDGYLLPKECIPSQVLQAQCRLALVAQAIDLTPSFSGGREVIQESVSGAVSVTYASGSASSPHFSWLPGLLRGLLISSRQIQLVRG
SIO_010081: CCS41_RS02645
subclass of: SO_0000673
so part of: CCS41_RS02645
location: complement(559585..560064)
location: region:559585-560064:-1
so has part: feature:559585-560064:-1:exon

WP_072551135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559585-560064:-1:exon

CCS41_RS15535
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15535
so part of: sequence
location: complement(560066..560236)
location: region:560066-560236:-1
so has part: feature:560066-560236:-1:exon
subclass of: SO_0000010

position:560066:-1
position: 560066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560236:-1
position: 560236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560066-560236:-1:exon

CCS41_RS15535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKNKKDNTAVTPLSALIPMMHSSPLHPDDPITANVHPDEVTRWQDEGWQLGEQEK
SIO_010081: CCS41_RS15535
subclass of: SO_0000673
so part of: CCS41_RS15535
location: complement(560066..560236)
location: region:560066-560236:-1
so has part: feature:560066-560236:-1:exon

WP_162859964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:560066-560236:-1:exon

CCS41_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02650
old locus tag: CCS41_02635
so part of: sequence
location: complement(560411..561361)
location: region:560411-561361:-1
so has part: feature:560411-561361:-1:exon
subclass of: SO_0000010

position:560411:-1
position: 560411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561361:-1
position: 561361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560411-561361:-1:exon

CCS41_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02650
old locus tag: CCS41_02635
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLTVKATHLIGSIVAVDGKPTIISDNLIDVGNNTGKPEKEGSKRALVSFSRVVTSQTFQVEEGFDDPTDGVNIVEIPAVTVKFTSLENPVEHNYPILECYNGLKESSMDQKSLENFLLQLTKEINSKGKAPSGLLGLRRAVAWICSCFRFHGVFQTNCTSTATALVETLQTGILHRAIPDLEGADIAQFPCVGTRDPDNVPIKRFLKHFRNKITTPPGVNDCGIITLQRPEWYKRYGLVGAHAIAFARIDSHLYLMDPQKKKLWSLDLRKGISISASREAEKFLGSLNGKDDSIQVYHLDLPIKKTITHSAKEAS
SIO_010081: CCS41_RS02650
subclass of: SO_0000673
so part of: CCS41_RS02650
location: complement(560411..561361)
location: region:560411-561361:-1
so has part: feature:560411-561361:-1:exon

WP_072551134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:560411-561361:-1:exon

CCS41_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02655
old locus tag: CCS41_02640
pseudo: true
so part of: sequence
location: complement(561591..562738)
location: region:561591-562738:-1
so has part: feature:561591-562738:-1:exon
subclass of: SO_0000010

position:561591:-1
position: 561591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562738:-1
position: 562738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561591-562738:-1:exon

CCS41_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02655
old locus tag: CCS41_02640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000918482.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: P22 phage major capsid protein family protein
SIO_010081: CCS41_RS02655
subclass of: SO_0000673
so part of: CCS41_RS02655
location: complement(561591..562738)
location: region:561591-562738:-1
so has part: feature:561591-562738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:561591-562738:-1:exon

CCS41_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02660
old locus tag: CCS41_02645
so part of: sequence
location: complement(562773..563525)
location: region:562773-563525:-1
so has part: feature:562773-563525:-1:exon
subclass of: SO_0000010

position:562773:-1
position: 562773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563525:-1
position: 563525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562773-563525:-1:exon

CCS41_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02660
old locus tag: CCS41_02645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016160818.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLHLDTEGKAVLENGMLVYLHEDGKAIPFDAVAALNKINALNGEAKNHREAKEALEAKLKAFAGIDDPAKAREALQTLTHIDQKKLIEAGAVDQVKAQITQAFQTQLDEASSKNKTLEAQLYQEMIGGRFSSSAFIQDNLAIPADLVQARFGQAFNIDAGKVVATDAAGNKVFSRRQPGEIAEFEEALEYLIEQYPHKDHILKASGHRGGGSQPTPQQNGQKTLKRSAFDALDIGSKQAALKDGISIVD
SIO_010081: CCS41_RS02660
subclass of: SO_0000673
so part of: CCS41_RS02660
location: complement(562773..563525)
location: region:562773-563525:-1
so has part: feature:562773-563525:-1:exon

WP_119797167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562773-563525:-1:exon

CCS41_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02665
old locus tag: CCS41_02650
so part of: sequence
location: 563844..564374
location: region:563844-564374:1
so has part: feature:563844-564374:1:exon
subclass of: SO_0000010

position:563844:1
position: 563844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564374:1
position: 564374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563844-564374:1:exon

CCS41_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02665
old locus tag: CCS41_02650
inference: COORDINATES: protein motif:HMM:NF013126.2
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 3 N-terminal domain-containing protein
translation: MILFFNGYRIAVFWTFLLFALSGCSSPSKQQGELLDETLLKEKIGQMLIVGFDGFKVETNSPIARAIQHRQLGGVILFDYDLKKKTYRRNIESPAQLKKLTAELQSLAAEADRYRANTAVSSYPLIIAVDYEGGEVNRLNSRYGFPETYSAQQFAKLPIQQKQQQTQSMAKTLVWL
SIO_010081: CCS41_RS02665
subclass of: SO_0000673
so part of: CCS41_RS02665
location: 563844..564374
location: region:563844-564374:1
so has part: feature:563844-564374:1:exon

WP_119797168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:563844-564374:1:exon

CCS41_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02680
old locus tag: CCS41_02655
so part of: sequence
location: complement(564634..565023)
location: region:564634-565023:-1
so has part: feature:564634-565023:-1:exon
subclass of: SO_0000010

position:564634:-1
position: 564634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565023:-1
position: 565023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564634-565023:-1:exon

CCS41_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02680
old locus tag: CCS41_02655
inference: COORDINATES: protein motif:HMM:NF013752.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSVKEQPPPEGVAPVEWVLLTNLTATDAFEAEEKVNWYRLRWKIEEFFNTLKSGCCVEQCRLNTATKLTKMITLKSIIAFKLMYMTKMAALCPEATCTDVLSKIEWQTLYCRIQTTSRLPEHPPQCFRQ
SIO_010081: CCS41_RS02680
subclass of: SO_0000673
so part of: CCS41_RS02680
location: complement(564634..565023)
location: region:564634-565023:-1
so has part: feature:564634-565023:-1:exon

WP_275887687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564634-565023:-1:exon

CCS41_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02685
old locus tag: CCS41_02660
so part of: sequence
location: complement(565085..566632)
location: region:565085-566632:-1
so has part: feature:565085-566632:-1:exon
subclass of: SO_0000010

position:565085:-1
position: 565085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566632:-1
position: 566632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565085-566632:-1:exon

CCS41_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02685
old locus tag: CCS41_02660
inference: COORDINATES: protein motif:HMM:NF033590.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MKNDSGEIGLLVESIVKSGNRHMKTVTGNGNEWIREEFHQIDFGDKRLKERFFETAGLLSSKASGSIYPSCHGSWSQAKGAYRFFSNERVSESALFRTHCVQTQKRLEGHSLVFSLQDTSELNFDSHKKTEGLGSISKAYHKHKMGLMLHASLMVTQEGLPLGLSSLKCWSRVSREETPQEKQRRLYQSTMKEKESIKWIETLYETAALIPKDTCLITLGDREADIFELFRVASSLKTFFIIRNRKDRKFIDEKGKKTTVQTALSKTPILKTIALTLPKNQQRVARTAYVDIRSTSGWFPIRNNLVYGPTNKDASRHIHEKVHVSAISVKEQPPPEGVAPVEWVLLTNLTATDAFEAEEKVNWYRLRWNCRLGYPRLNAGHVFPERNPPQEKQRRLYQSTMKEKESIKWIETLYETAALIPKDTRLITLGDREADIFELFRVASSLKTFFIIRNRKDRKFIDEKGKKTTVQTALSKTPILKTIALTLPKNQQRVARTAYVDIRSISGCGSPLEII
SIO_010081: CCS41_RS02685
subclass of: SO_0000673
so part of: CCS41_RS02685
location: complement(565085..566632)
location: region:565085-566632:-1
so has part: feature:565085-566632:-1:exon

WP_119797171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565085-566632:-1:exon

CCS41_RS17045
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS17045
so part of: sequence
location: 566651..566863
location: region:566651-566863:1
so has part: feature:566651-566863:1:exon
subclass of: SO_0000010

position:566651:1
position: 566651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566863:1
position: 566863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566651-566863:1:exon

CCS41_RS17045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS17045
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVQVRRIRREIFQNKTRFLSSRLDILAFVKAHIIHHDNSTLRDFWQSVLGYPRITNIAIDIIFKGTNGG
SIO_010081: CCS41_RS17045
subclass of: SO_0000673
so part of: CCS41_RS17045
location: 566651..566863
location: region:566651-566863:1
so has part: feature:566651-566863:1:exon

WP_275887676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566651-566863:1:exon

CCS41_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02695
old locus tag: CCS41_02670
so part of: sequence
location: complement(567024..567392)
location: region:567024-567392:-1
so has part: feature:567024-567392:-1:exon
subclass of: SO_0000010

position:567024:-1
position: 567024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567392:-1
position: 567392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567024-567392:-1:exon

CCS41_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02695
old locus tag: CCS41_02670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MTYPLKFRQHVLAIKEQEKLTYAQTATRFCIGTASLMRWAKRIEPCLTRDKPASKIARAALILDVETYPDASQYERAQRMGVSARGICHALKRAGFSYKKNILSSKSQRPIPRRFSGQDPGL
SIO_010081: CCS41_RS02695
subclass of: SO_0000673
so part of: CCS41_RS02695
location: complement(567024..567392)
location: region:567024-567392:-1
so has part: feature:567024-567392:-1:exon

WP_119797707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567024-567392:-1:exon

CCS41_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02700
old locus tag: CCS41_02675
so part of: sequence
location: complement(568030..568254)
location: region:568030-568254:-1
so has part: feature:568030-568254:-1:exon
subclass of: SO_0000010

position:568030:-1
position: 568030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568254:-1
position: 568254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568030-568254:-1:exon

CCS41_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02700
old locus tag: CCS41_02675
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRIKTFLKVLLVLLLPMPIFAADVCKILVGVPTFRGLIKVCTKQKPTVQETKPPEQKKDEINKWRPAPLWFPK
SIO_010081: CCS41_RS02700
subclass of: SO_0000673
so part of: CCS41_RS02700
location: complement(568030..568254)
location: region:568030-568254:-1
so has part: feature:568030-568254:-1:exon

WP_072550862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568030-568254:-1:exon

CCS41_RS15545
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS15545
so part of: sequence
location: complement(569064..569213)
location: region:569064-569213:-1
so has part: feature:569064-569213:-1:exon
subclass of: SO_0000010

position:569064:-1
position: 569064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569213:-1
position: 569213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569064-569213:-1:exon

CCS41_RS15545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS15545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLLRLVLIASLALTSLGLSAKVVVNDNKIDNQLYDSSDRKRCGYLRCE
SIO_010081: CCS41_RS15545
subclass of: SO_0000673
so part of: CCS41_RS15545
location: complement(569064..569213)
location: region:569064-569213:-1
so has part: feature:569064-569213:-1:exon

WP_162859968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:569064-569213:-1:exon

CCS41_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02705
old locus tag: CCS41_02680
so part of: sequence
location: complement(569481..569792)
location: region:569481-569792:-1
so has part: feature:569481-569792:-1:exon
subclass of: SO_0000010

position:569481:-1
position: 569481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569792:-1
position: 569792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569481-569792:-1:exon

CCS41_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02705
old locus tag: CCS41_02680
inference: COORDINATES: protein motif:HMM:NF012870.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MKAGDVFGGVMDLYSRQIIGWALADPMKTALCVQALQMAYWRRKSPKGLLRHSDRGSQYISHQYCAHLQVMGVQASMNGKGQCWDNVPTERFFRSLKYELLEL
SIO_010081: CCS41_RS02705
subclass of: SO_0000673
so part of: CCS41_RS02705
location: complement(569481..569792)
location: region:569481-569792:-1
so has part: feature:569481-569792:-1:exon

WP_119797173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:569481-569792:-1:exon

CCS41_RS16350
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS16350
old locus tag: CCS41_02685
so part of: sequence
location: 570313..571215
location: region:570313-571215:1
so has part: feature:570313-571215:1:exon
subclass of: SO_0000010

position:570313:1
position: 570313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571215:1
position: 571215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570313-571215:1:exon

CCS41_RS16350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS16350
old locus tag: CCS41_02685
inference: COORDINATES: protein motif:HMM:NF023583.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M N-terminal domain-containing protein
translation: MTNLAGLAASLASFIWKNAEDLWQDFKYIDFGKIILPFTFLRCLECVLEPTRKAVFEAYEDFKDGGFDLDLILANLNLTDYENVPLMENIRDYFTREVLLYLPDAYCDETYCDDKDKQVGGVRFEINFNRCFCKYVTPRKLAEKDIEDVDGAYPVMSFGGESAKASACIFNGESVLLEGKGTIDKPLYINGPSRTVDTLFYTKITDNAFPKFVYYSTQTIPFGHYSTNTVLPSMTGEDLSSHLIAVPEFFEQRAITNTLNREATHIVQLTEKSQHSINLLKERSSAPITASVTGQIDLRE
SIO_010081: CCS41_RS16350
subclass of: SO_0000673
so part of: CCS41_RS16350
location: 570313..571215
location: region:570313-571215:1
so has part: feature:570313-571215:1:exon

WP_083429643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:570313-571215:1:exon

CCS41_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02715
old locus tag: CCS41_02690
so part of: sequence
location: 571218..571748
location: region:571218-571748:1
so has part: feature:571218-571748:1:exon
subclass of: SO_0000010

position:571218:1
position: 571218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571748:1
position: 571748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571218-571748:1:exon

CCS41_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02715
old locus tag: CCS41_02690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIDTAHQEKRFAAYVIAKLEAQGQGWKVGNTFHDDTSCALYPDDLIAWQEETQSTKWARLCKDSAEHASEVLMDRLVKALEQHGTLQVLKRGFSISGCGHIDLSAMKAANRQKCTYADQLKTLLAFKTGLGHFYRTYSYVTQLIDFGDPSLENFAASASLLQKRLENSTREPVWVL
SIO_010081: CCS41_RS02715
subclass of: SO_0000673
so part of: CCS41_RS02715
location: 571218..571748
location: region:571218-571748:1
so has part: feature:571218-571748:1:exon

WP_072550864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571218-571748:1:exon

CCS41_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02720
old locus tag: CCS41_02695
so part of: sequence
location: 571794..574553
location: region:571794-574553:1
so has part: feature:571794-574553:1:exon
subclass of: SO_0000010

position:571794:1
position: 571794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574553:1
position: 574553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571794-574553:1:exon

CCS41_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02720
old locus tag: CCS41_02695
EC number: 3.6.4.-
inference: COORDINATES: protein motif:HMM:NF012403.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MTNKPDFNNVFSPPDEVEAVVLDLQISPTGHIHLGHIAGHSSLSPLEVTGITKAFERGSGDGLLHLLTVKRASELLPPSLVFGYQLAHLFMRGLCAVPNLASQWDHVEIALPVVELQQRVVTAPPMVGAEYLDIPRLTMIWLDLQTAARTEIAATQGDVQAWLQCKHPSWNLIGRVCFHLAENKNHEQAPFAFLATYAAGVSQQSRVQYQPLRQALQEYAGAGNHDMLLRLLQPVNKAAEQSPWIKSLLDSGTLFHPIAWTPAKAHQFLRHIPIFESCGIVVRIPDWWQVRQPPRPQVKVNIGNSVAGLGLNAMLDFDVSLSLDGEEISLAEWKQLLTMSDGLVQLKGRWIELDRKKLESVLEHWKKVQRDAANGNISFIDGMRLLAGAAVEGKSEVALLPDAADWSNVVAGNGLQQALEGLRDPHNIADDLHLGDELQVQLRPYQKEGVRWLWLLNRLGLGGCLADDMGLGKTVQILALLLLAKREGDVKPHLLVLPTSLIGNWQSEITRFAPGLSILIAHPSAIPSEALNALPAECLENVDVVITSYGSLIRLPWLLQTSWSLVVLDEAQAIKNPTAYQTKAAKALKSRVRFVLTGTPVENRLGDLWSLFDFICPGLLGSSKAFSLFIRRLAQDKQQGYAPLRNLVKPYILRRMKSDKRIIADLPDKTEVKTYCVLSRLQASLYGQAIATLVQQIDKVEGIARRGLVLAFLMRFKQICNHPSQWLGDEAYLENNSGKFVRLRELAQDIAARQEKVLVFTQFKEMTAPLAAFLQDIFGCAGLQLHGGIAVKTRKALVDKFQQETGPPFFVLSIKAGGTGLNLTAASHVIHFDRWWNPAVENQATDRAYRIGQKKNVLVHKFICRGTIEERIDTMIENKIGLSNDLLAGGGETLLTEMSNEALLKLVSLDINSTVAEEK
SIO_010081: CCS41_RS02720
subclass of: SO_0000673
so part of: CCS41_RS02720
location: 571794..574553
location: region:571794-574553:1
so has part: feature:571794-574553:1:exon

WP_072550865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571794-574553:1:exon

CCS41_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02725
old locus tag: CCS41_02700
so part of: sequence
location: 574591..575478
location: region:574591-575478:1
so has part: feature:574591-575478:1:exon
subclass of: SO_0000010

position:574591:1
position: 574591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575478:1
position: 575478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574591-575478:1:exon

CCS41_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1878942
locus tag: CCS41_RS02725
old locus tag: CCS41_02700
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNYFNGGWPRYVPVAELHASAMCKIKELKKKGKICHPVEVGGRCIVDTFWGKKWCQHLEAYSDYANRLPRGRSYVRHGSVIDLKIAAGKITALVVGATTYRVSIEVSSLDPKLWQIIIDECAGKVASLVELLQGRLSSAVMEVVTRPKSGLFPSPEQISFHCSCPDSAFLCKHIAATLYGVGVRFDRQPELLFLLRDVEPQELILQAGRMPVANTPTVLDQQLDTSDLSTLFGIELNTVPLDSHPSMPTLKTQHKTNIEPPFDTPQVIRSQSVTKGKDKAKSAKKKNHSNLDHNC
SIO_010081: CCS41_RS02725
subclass of: SO_0000673
so part of: CCS41_RS02725
location: 574591..575478
location: region:574591-575478:1
so has part: feature:574591-575478:1:exon

WP_072550866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574591-575478:1:exon

CCS41_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 1878942
locus tag: CCS41_RS02730
old locus tag: CCS41_02705
so part of: sequence
location: complement(575490..576383)
location: region:575490-576383:-1
so has part: feature:575490-576383:-1:exon
subclass of: SO_0000010