Vidua macroura isolate BioBank_ID:100142 chromosome 31, ASM2450914v1, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Viduinae; Vidua.
REFSEQ INFORMATION: The reference sequence is identical to\nCM044090.1.\nAssembly name: ASM2450914v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Missouri on\n2022/08/03. The original whole-genome shotgun project has the\naccession JAMGYM000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Missouri\nAssembly Date :: SEP-2021\nAssembly Method :: HiFasm v. SEPT-2021\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 47.6x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_024509145.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/03/2023\n##Genome-Annotation-Data-END##
PKHD1 ciliary IPT domain containing fibrocystin/polyductin; Derived by automated computational analysis using gene prediction method: Gnomon.
PKHD1 ciliary IPT domain containing fibrocystin/polyductin
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin 17A; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
interleukin-17F-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
minichromosome maintenance complex component 3; Derived by automated computational analysis using gene prediction method: Gnomon.
minichromosome maintenance complex component 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
progestin and adipoQ receptor family member 8; Derived by automated computational analysis using gene prediction method: Gnomon.
progestin and adipoQ receptor family member 8, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
progestin and adipoQ receptor family member 8, transcript variant X2
EF-hand domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
translocation associated membrane protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
translocation associated membrane protein 2
translocating chain-associated membrane protein 2
XK related 5; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
gallinacin-4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
gallinacin-5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128820864; Derived by automated computational analysis using gene prediction method: Gnomon.
antimicrobial peptide THP1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
antimicrobial peptide THP1-like, transcript variant X1
uncharacterized protein LOC128820863 isoform X1
antimicrobial peptide THP1-like, transcript variant X2
antimicrobial peptide THP1-like isoform X2
gallinacin-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
gallinacin-2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC128820829; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128820829, transcript variant X1
uncharacterized LOC128820829, transcript variant X2
uncharacterized LOC128820861; Derived by automated computational analysis using gene prediction method: Gnomon.
cathepsin B; Derived by automated computational analysis using gene prediction method: Gnomon.
farnesyl-diphosphate farnesyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
farnesyl-diphosphate farnesyltransferase 1
nei like DNA glycosylase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
GATA binding protein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
GATA binding protein 4, transcript variant X3
GATA binding protein 4, transcript variant X2
GATA binding protein 4, transcript variant X1
BLK proto-oncogene, Src family tyrosine kinase; Derived by automated computational analysis using gene prediction method: Gnomon.
BLK proto-oncogene, Src family tyrosine kinase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76 Proteins
family with sequence similarity 167 member A; Derived by automated computational analysis using gene prediction method: Gnomon.
family with sequence similarity 167 member A
L-threonine 3-dehydrogenase, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
L-threonine 3-dehydrogenase, mitochondrial-like, transcript variant X2
L-threonine 3-dehydrogenase, mitochondrial-like, transcript variant X1
L-threonine 3-dehydrogenase, mitochondrial-like
myotubularin related protein 9; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128820835; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128820814; Derived by automated computational analysis using gene prediction method: Gnomon.
XK related 6; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
uncharacterized LOC128820813; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128820813, transcript variant X2
uncharacterized LOC128820813, transcript variant X3
uncharacterized LOC128820813, transcript variant X1
uncharacterized LOC128820811; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128820811, transcript variant X2
uncharacterized LOC128820811, transcript variant X1
uncharacterized LOC128820812; Derived by automated computational analysis using gene prediction method: Gnomon.
PIN2 (TERF1) interacting telomerase inhibitor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
PIN2 (TERF1) interacting telomerase inhibitor 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
PIN2/TERF1-interacting telomerase inhibitor 1 isoform X1
PIN2 (TERF1) interacting telomerase inhibitor 1, transcript variant X2
PIN2/TERF1-interacting telomerase inhibitor 1 isoform X2
SRY-box transcription factor 7; Derived by automated computational analysis using gene prediction method: Gnomon.
RP1 like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
serine protease 55-like; Derived by automated computational analysis using gene prediction method: Gnomon.
serine protease 55-like, transcript variant X3
serine protease 55-like, transcript variant X1
serine protease 55-like, transcript variant X2
uncharacterized LOC128820819; Derived by automated computational analysis using gene prediction method: Gnomon.
methionine sulfoxide reductase A; Derived by automated computational analysis using gene prediction method: Gnomon.
methionine sulfoxide reductase A, transcript variant X1
methionine sulfoxide reductase A, transcript variant X3
methionine sulfoxide reductase A, transcript variant X2
mitochondrial peptide methionine sulfoxide reductase isoform X1
mitochondrial peptide methionine sulfoxide reductase isoform X2
mitochondrial peptide methionine sulfoxide reductase isoform X3
uncharacterized LOC128820860; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128820832; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128820832, transcript variant X1
uncharacterized LOC128820832, transcript variant X2
kinesin family member 13B; Derived by automated computational analysis using gene prediction method: Gnomon.
kinesin family member 13B, transcript variant X1
kinesin family member 13B, transcript variant X2
kinesin family member 13B, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
homeobox containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
homeobox containing 1, transcript variant X9
homeobox containing 1, transcript variant X3
homeobox containing 1, transcript variant X5
homeobox containing 1, transcript variant X4
homeobox containing 1, transcript variant X8
homeobox containing 1, transcript variant X7
homeobox containing 1, transcript variant X2
homeobox containing 1, transcript variant X1
homeobox containing 1, transcript variant X6
homeobox-containing protein 1 isoform X7
homeobox-containing protein 1 isoform X3
homeobox-containing protein 1 isoform X5
homeobox-containing protein 1 isoform X2
homeobox-containing protein 1 isoform X4
homeobox-containing protein 1 isoform X1
homeobox-containing protein 1 isoform X6
integrator complex subunit 9; Derived by automated computational analysis using gene prediction method: Gnomon.
integrator complex subunit 9, transcript variant X1
integrator complex subunit 9, transcript variant X2
exostosin like glycosyltransferase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
exostosin like glycosyltransferase 3, transcript variant X3
exostosin like glycosyltransferase 3, transcript variant X4
exostosin like glycosyltransferase 3, transcript variant X1
exostosin like glycosyltransferase 3, transcript variant X2
uncharacterized LOC128820821; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128820821, transcript variant X1
uncharacterized LOC128820821, transcript variant X3
uncharacterized LOC128820821, transcript variant X2
uncharacterized LOC128820821, transcript variant X4
frizzled class receptor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
frizzled class receptor 3, transcript variant X1
frizzled class receptor 3, transcript variant X3
frizzled class receptor 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
F-box protein 16; Derived by automated computational analysis using gene prediction method: Gnomon.
elongator acetyltransferase complex subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon.
elongator acetyltransferase complex subunit 3
uncharacterized LOC128820825; Derived by automated computational analysis using gene prediction method: Gnomon.
serine/threonine-protein kinase PDIK1L-like; Derived by automated computational analysis using gene prediction method: Gnomon.
serine/threonine-protein kinase PDIK1L-like, transcript variant X5
serine/threonine-protein kinase PDIK1L-like, transcript variant X8
serine/threonine-protein kinase PDIK1L-like, transcript variant X2
serine/threonine-protein kinase PDIK1L-like, transcript variant X9
serine/threonine-protein kinase PDIK1L-like, transcript variant X1
serine/threonine-protein kinase PDIK1L-like, transcript variant X6
serine/threonine-protein kinase PDIK1L-like, transcript variant X7
serine/threonine-protein kinase PDIK1L-like, transcript variant X4
serine/threonine-protein kinase PDIK1L-like, transcript variant X3
serine/threonine-protein kinase PDIK1L-like
prepronociceptin; Derived by automated computational analysis using gene prediction method: Gnomon.