Vidua macroura mitochondrion, complete genome.
type: Entry
definition: Vidua macroura mitochondrion, complete genome.
sequence version: NC_053065.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_053065.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Vidua macroura (Pin-tailed whydah)
organism: Vidua macroura
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Viduinae; Vidua.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to MN356270.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16874
topology: circular
so has quality: SO_0000988
location: 1..16874
location: region:1-16874:1
RO_0002162: 187451

NC_053065
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Densely sampling genomes across the diversity of birds increases power of comparative genomics analyses
author: Feng, S.
author: Stiller, J.
author: Andreu-Sanchez, S.
author: Margaryan, A.
author: Chen, W.
author: Paten, B.
author: Zhang, G.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (21-FEB-2021) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Feng, S.
author: Stiller, J.
author: Andreu-Sanchez, S.
author: Margaryan, A.
author: Chen, W.
author: Paten, B.
author: Zhang, G.
journal: Submitted (22-AUG-2019) China National GeneBank, BGI-Shenzhen, Jinsha Road, Shenzhen, Guangdong 518120, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16874:1
position: 16874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16874:1:source
so part of: sequence
organism: Vidua macroura
organelle: mitochondrion
mol type: genomic DNA

187451
type: Taxonomy
SIO_000068: taxonomy

JXX56_mgt01
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnF(gaa)
locus tag: JXX56_mgt01
so part of: sequence
location: 1..70
location: region:1-70:1
so has part: feature:1-70:1:exon
subclass of: SO_0000663

63024200
type: Gene
SIO_000068: ncbigene

position:70:1
position: 70
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-70:1:exon

JXX56_mgt01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnF(gaa)
locus tag: JXX56_mgt01
product: tRNA-Phe
SIO_010081: JXX56_mgt01
subclass of: SO_0000673
so part of: JXX56_mgt01
location: 1..70
location: region:1-70:1
so has part: feature:1-70:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-70:1:exon

JXX56_mgr02
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
locus tag: JXX56_mgr02
so part of: sequence
location: 70..1049
location: region:70-1049:1
so has part: feature:70-1049:1:exon
subclass of: SO_0000573

63024166
type: Gene
SIO_000068: ncbigene

position:1049:1
position: 1049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70-1049:1:exon

JXX56_mgr02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 187451
locus tag: JXX56_mgr02
product: 12S ribosomal RNA
SIO_010081: JXX56_mgr02
subclass of: SO_0000673
so part of: JXX56_mgr02
location: 70..1049
location: region:70-1049:1
so has part: feature:70-1049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70-1049:1:exon

JXX56_mgt02
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnV(uac)
locus tag: JXX56_mgt02
so part of: sequence
location: 1049..1118
location: region:1049-1118:1
so has part: feature:1049-1118:1:exon
subclass of: SO_0000663

63024201
type: Gene
SIO_000068: ncbigene

position:1118:1
position: 1118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049-1118:1:exon

JXX56_mgt02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnV(uac)
locus tag: JXX56_mgt02
product: tRNA-Val
SIO_010081: JXX56_mgt02
subclass of: SO_0000673
so part of: JXX56_mgt02
location: 1049..1118
location: region:1049-1118:1
so has part: feature:1049-1118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1049-1118:1:exon

JXX56_mgr01
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
locus tag: JXX56_mgr01
so part of: sequence
location: 1119..2715
location: region:1119-2715:1
so has part: feature:1119-2715:1:exon
subclass of: SO_0000573

63024167
type: Gene
SIO_000068: ncbigene

position:1119:1
position: 1119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2715:1
position: 2715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1119-2715:1:exon

JXX56_mgr01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 187451
locus tag: JXX56_mgr01
product: 16S ribosomal RNA
SIO_010081: JXX56_mgr01
subclass of: SO_0000673
so part of: JXX56_mgr01
location: 1119..2715
location: region:1119-2715:1
so has part: feature:1119-2715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1119-2715:1:exon

JXX56_mgt03
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnL(uaa)
locus tag: JXX56_mgt03
so part of: sequence
location: 2716..2790
location: region:2716-2790:1
so has part: feature:2716-2790:1:exon
subclass of: SO_0000663

63024202
type: Gene
SIO_000068: ncbigene

position:2716:1
position: 2716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2790:1
position: 2790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2716-2790:1:exon

JXX56_mgt03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnL(uaa)
locus tag: JXX56_mgt03
product: tRNA-Leu
SIO_010081: JXX56_mgt03
subclass of: SO_0000673
so part of: JXX56_mgt03
location: 2716..2790
location: region:2716-2790:1
so has part: feature:2716-2790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2716-2790:1:exon

JXX56_mgp13
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: ND1
locus tag: JXX56_mgp13
so part of: sequence
location: 2797..3774
location: region:2797-3774:1
so has part: feature:2797-3774:1:exon
subclass of: SO_0000010

63024168
type: Gene
SIO_000068: ncbigene

position:2797:1
position: 2797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3774:1
position: 3774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2797-3774:1:exon

JXX56_mgp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: ND1
locus tag: JXX56_mgp13
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MTNHPILINLIMIISYALPILIAVAFLTLVERKILSYMQNRKGPNIVGPFGLLQPLADGIKLFIKEPIRPSTSSPILFIMTPILALTLAISIWVPLPLPFSLADLNLGILFLLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLAVVLLSGNFTLSALAVTQEPMYLIFPCWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTTILFFNPSLLNLQQELFPVVLATKVLLLSAGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHISMPICYAGLPPSL
SIO_010081: JXX56_mgp13
subclass of: SO_0000673
so part of: JXX56_mgp13
location: 2797..3774
location: region:2797-3774:1
so has part: feature:2797-3774:1:exon

YP_010000456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2797-3774:1:exon

JXX56_mgt04
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnI(gau)
locus tag: JXX56_mgt04
so part of: sequence
location: 3781..3852
location: region:3781-3852:1
so has part: feature:3781-3852:1:exon
subclass of: SO_0000663

63024169
type: Gene
SIO_000068: ncbigene

position:3781:1
position: 3781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3852:1
position: 3852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3781-3852:1:exon

JXX56_mgt04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnI(gau)
locus tag: JXX56_mgt04
product: tRNA-Ile
SIO_010081: JXX56_mgt04
subclass of: SO_0000673
so part of: JXX56_mgt04
location: 3781..3852
location: region:3781-3852:1
so has part: feature:3781-3852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3781-3852:1:exon

JXX56_mgt05
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnQ(uug)
locus tag: JXX56_mgt05
so part of: sequence
location: complement(3858..3928)
location: region:3858-3928:-1
so has part: feature:3858-3928:-1:exon
subclass of: SO_0000663

63024170
type: Gene
SIO_000068: ncbigene

position:3858:-1
position: 3858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3928:-1
position: 3928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3858-3928:-1:exon

JXX56_mgt05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnQ(uug)
locus tag: JXX56_mgt05
product: tRNA-Gln
SIO_010081: JXX56_mgt05
subclass of: SO_0000673
so part of: JXX56_mgt05
location: complement(3858..3928)
location: region:3858-3928:-1
so has part: feature:3858-3928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3858-3928:-1:exon

JXX56_mgt06
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnM(cau)
locus tag: JXX56_mgt06
so part of: sequence
location: 3928..3996
location: region:3928-3996:1
so has part: feature:3928-3996:1:exon
subclass of: SO_0000663

63024171
type: Gene
SIO_000068: ncbigene

position:3928:1
position: 3928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3996:1
position: 3996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3928-3996:1:exon

JXX56_mgt06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnM(cau)
locus tag: JXX56_mgt06
product: tRNA-Met
SIO_010081: JXX56_mgt06
subclass of: SO_0000673
so part of: JXX56_mgt06
location: 3928..3996
location: region:3928-3996:1
so has part: feature:3928-3996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3928-3996:1:exon

JXX56_mgp12
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: ND2
locus tag: JXX56_mgp12
so part of: sequence
location: 3997..5036
location: region:3997-5036:1
so has part: feature:3997-5036:1:exon
subclass of: SO_0000010

63024172
type: Gene
SIO_000068: ncbigene

position:3997:1
position: 3997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5036:1
position: 5036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3997-5036:1:exon

JXX56_mgp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: ND2
locus tag: JXX56_mgp12
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5035..5036,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPQAKLVFTLSLLLGTTITLSSNHWVMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALVLFSSMTNAWHTGQWDITQLTHPVSSLVLTSAIAMKLGLVPFHFWFPEVMQGSSLLTGLLLSTLMKLPPIALLFMTAQSLNSSLLVLMAILSAAVGGWMGLNQTQVRKILAFSSISHLGWMAIIITYYPKLTLLNFYLYAVMTTAVFLALNSMKALSLPTLMTAWTKTPSLSAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLSLFFYLRLAYCTAITLPPHTTNQIKQWRINKPVNILVAILVTMSIILLPISPMILSIP
SIO_010081: JXX56_mgp12
subclass of: SO_0000673
so part of: JXX56_mgp12
location: 3997..5036
location: region:3997-5036:1
so has part: feature:3997-5036:1:exon

YP_010000457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3997-5036:1:exon

JXX56_mgt07
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnW(uca)
locus tag: JXX56_mgt07
so part of: sequence
location: 5037..5106
location: region:5037-5106:1
so has part: feature:5037-5106:1:exon
subclass of: SO_0000663

63024173
type: Gene
SIO_000068: ncbigene

position:5037:1
position: 5037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5106:1
position: 5106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5037-5106:1:exon

JXX56_mgt07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnW(uca)
locus tag: JXX56_mgt07
product: tRNA-Trp
SIO_010081: JXX56_mgt07
subclass of: SO_0000673
so part of: JXX56_mgt07
location: 5037..5106
location: region:5037-5106:1
so has part: feature:5037-5106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5037-5106:1:exon

JXX56_mgt08
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnA(ugc)
locus tag: JXX56_mgt08
so part of: sequence
location: complement(5108..5176)
location: region:5108-5176:-1
so has part: feature:5108-5176:-1:exon
subclass of: SO_0000663

63024174
type: Gene
SIO_000068: ncbigene

position:5108:-1
position: 5108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5176:-1
position: 5176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5108-5176:-1:exon

JXX56_mgt08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnA(ugc)
locus tag: JXX56_mgt08
product: tRNA-Ala
SIO_010081: JXX56_mgt08
subclass of: SO_0000673
so part of: JXX56_mgt08
location: complement(5108..5176)
location: region:5108-5176:-1
so has part: feature:5108-5176:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5108-5176:-1:exon

JXX56_mgt09
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnN(guu)
locus tag: JXX56_mgt09
so part of: sequence
location: complement(5186..5258)
location: region:5186-5258:-1
so has part: feature:5186-5258:-1:exon
subclass of: SO_0000663

63024175
type: Gene
SIO_000068: ncbigene

position:5186:-1
position: 5186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5258:-1
position: 5258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5186-5258:-1:exon

JXX56_mgt09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnN(guu)
locus tag: JXX56_mgt09
product: tRNA-Asn
SIO_010081: JXX56_mgt09
subclass of: SO_0000673
so part of: JXX56_mgt09
location: complement(5186..5258)
location: region:5186-5258:-1
so has part: feature:5186-5258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5186-5258:-1:exon

JXX56_mgt10
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnC(gca)
locus tag: JXX56_mgt10
so part of: sequence
location: complement(5259..5325)
location: region:5259-5325:-1
so has part: feature:5259-5325:-1:exon
subclass of: SO_0000663

63024176
type: Gene
SIO_000068: ncbigene

position:5259:-1
position: 5259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5325:-1
position: 5325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5259-5325:-1:exon

JXX56_mgt10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnC(gca)
locus tag: JXX56_mgt10
product: tRNA-Cys
SIO_010081: JXX56_mgt10
subclass of: SO_0000673
so part of: JXX56_mgt10
location: complement(5259..5325)
location: region:5259-5325:-1
so has part: feature:5259-5325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5259-5325:-1:exon

JXX56_mgt11
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnY(gua)
locus tag: JXX56_mgt11
so part of: sequence
location: complement(5326..5395)
location: region:5326-5395:-1
so has part: feature:5326-5395:-1:exon
subclass of: SO_0000663

63024177
type: Gene
SIO_000068: ncbigene

position:5326:-1
position: 5326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5395:-1
position: 5395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5326-5395:-1:exon

JXX56_mgt11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnY(gua)
locus tag: JXX56_mgt11
product: tRNA-Tyr
SIO_010081: JXX56_mgt11
subclass of: SO_0000673
so part of: JXX56_mgt11
location: complement(5326..5395)
location: region:5326-5395:-1
so has part: feature:5326-5395:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5326-5395:-1:exon

JXX56_mgp11
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: COX1
locus tag: JXX56_mgp11
so part of: sequence
location: 5397..6947
location: region:5397-6947:1
so has part: feature:5397-6947:1:exon
subclass of: SO_0000010

63024178
type: Gene
SIO_000068: ncbigene

position:5397:1
position: 5397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6947:1
position: 6947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5397-6947:1:exon

JXX56_mgp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: COX1
locus tag: JXX56_mgp11
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MTFINRWLFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELGQPGALLGDDQVYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGVISHVVTYYSGKKEPFGYMGMVWAMLSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGIKVFSWLATLHGGTIKWDPPMLWALGFIFLFTIGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLHSTWAKAHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTISSIGSLISLTAVIMLVFIIWEAFASKRKATQPELTSTNIEWIHGCPPPFHTFEEPAFVQVQE
SIO_010081: JXX56_mgp11
subclass of: SO_0000673
so part of: JXX56_mgp11
location: 5397..6947
location: region:5397-6947:1
so has part: feature:5397-6947:1:exon

YP_010000458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5397-6947:1:exon

JXX56_mgt12
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnS(uga)
locus tag: JXX56_mgt12
so part of: sequence
location: complement(6939..7010)
location: region:6939-7010:-1
so has part: feature:6939-7010:-1:exon
subclass of: SO_0000663

63024179
type: Gene
SIO_000068: ncbigene

position:6939:-1
position: 6939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7010:-1
position: 7010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6939-7010:-1:exon

JXX56_mgt12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnS(uga)
locus tag: JXX56_mgt12
product: tRNA-Ser
SIO_010081: JXX56_mgt12
subclass of: SO_0000673
so part of: JXX56_mgt12
location: complement(6939..7010)
location: region:6939-7010:-1
so has part: feature:6939-7010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6939-7010:-1:exon

JXX56_mgt13
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnD(guc)
locus tag: JXX56_mgt13
so part of: sequence
location: 7016..7084
location: region:7016-7084:1
so has part: feature:7016-7084:1:exon
subclass of: SO_0000663

63024180
type: Gene
SIO_000068: ncbigene

position:7016:1
position: 7016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7084:1
position: 7084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7016-7084:1:exon

JXX56_mgt13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnD(guc)
locus tag: JXX56_mgt13
product: tRNA-Asp
SIO_010081: JXX56_mgt13
subclass of: SO_0000673
so part of: JXX56_mgt13
location: 7016..7084
location: region:7016-7084:1
so has part: feature:7016-7084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7016-7084:1:exon

JXX56_mgp10
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: COX2
locus tag: JXX56_mgp10
so part of: sequence
location: 7093..7776
location: region:7093-7776:1
so has part: feature:7093-7776:1:exon
subclass of: SO_0000010

63024181
type: Gene
SIO_000068: ncbigene

position:7093:1
position: 7093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7776:1
position: 7776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7093-7776:1:exon

JXX56_mgp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: COX2
locus tag: JXX56_mgp10
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MANHSQLNFQDASSPIMEELMGFHDHALMVALAICSLVLYLLTVTLTGKLSSNTVDAQVIELVWTILPAMVLVALALPSLRILYMMDEINEPDLTLKAIGHQWYWSYEYTDLKNLTFDSYMIPTTDLPRGHFRLLEVDHRVVIPTSSTVRVIVTADDVLHSWAVPSLGVKTDAVPGRLNQTSLFASRPGVFYGQCSEICGANHSFMPIVVESTPLANFESWSSSIPS
SIO_010081: JXX56_mgp10
subclass of: SO_0000673
so part of: JXX56_mgp10
location: 7093..7776
location: region:7093-7776:1
so has part: feature:7093-7776:1:exon

YP_010000459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7093-7776:1:exon

JXX56_mgt14
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnK(uuu)
locus tag: JXX56_mgt14
so part of: sequence
location: 7788..7856
location: region:7788-7856:1
so has part: feature:7788-7856:1:exon
subclass of: SO_0000663

63024182
type: Gene
SIO_000068: ncbigene

position:7788:1
position: 7788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7856:1
position: 7856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7788-7856:1:exon

JXX56_mgt14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnK(uuu)
locus tag: JXX56_mgt14
product: tRNA-Lys
SIO_010081: JXX56_mgt14
subclass of: SO_0000673
so part of: JXX56_mgt14
location: 7788..7856
location: region:7788-7856:1
so has part: feature:7788-7856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7788-7856:1:exon

JXX56_mgp09
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: ATP8
locus tag: JXX56_mgp09
so part of: sequence
location: 7858..8025
location: region:7858-8025:1
so has part: feature:7858-8025:1:exon
subclass of: SO_0000010

63024183
type: Gene
SIO_000068: ncbigene

position:7858:1
position: 7858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8025:1
position: 8025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7858-8025:1:exon

JXX56_mgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: ATP8
locus tag: JXX56_mgp09
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPNPWLFIMLISWFTFAMIIQPKILTFVSANPPSKKAPTTPNTTPWNWPWT
SIO_010081: JXX56_mgp09
subclass of: SO_0000673
so part of: JXX56_mgp09
location: 7858..8025
location: region:7858-8025:1
so has part: feature:7858-8025:1:exon

YP_010000460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7858-8025:1:exon

JXX56_mgp08
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: ATP6
locus tag: JXX56_mgp08
so part of: sequence
location: 8016..8699
location: region:8016-8699:1
so has part: feature:8016-8699:1:exon
subclass of: SO_0000010

63024184
type: Gene
SIO_000068: ncbigene

position:8016:1
position: 8016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8699:1
position: 8699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8016-8699:1:exon

JXX56_mgp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: ATP6
locus tag: JXX56_mgp08
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNLSFFDQFSSPSLLGIPLVLISTMFPALLIPSMDKRWITNRLSTLQLWFINLVTKQLMSPLNNKGHKWALILTSLMIFLLLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAGHLLIQLISTATVAMFSTMPAVSLLTLLVLFLLTILEIAVAMIQAYVFVLLLSLYLQENI
SIO_010081: JXX56_mgp08
subclass of: SO_0000673
so part of: JXX56_mgp08
location: 8016..8699
location: region:8016-8699:1
so has part: feature:8016-8699:1:exon

YP_010000461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8016-8699:1:exon

JXX56_mgp07
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: COX3
locus tag: JXX56_mgp07
so part of: sequence
location: 8705..9489
location: region:8705-9489:1
so has part: feature:8705-9489:1:exon
subclass of: SO_0000010

63024185
type: Gene
SIO_000068: ncbigene

position:8705:1
position: 8705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9489:1
position: 9489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8705-9489:1:exon

JXX56_mgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: COX3
locus tag: JXX56_mgp07
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9488..9489,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHSYHMVDPSPWPILGAAAALLTASGLTMWFHSNSPRLLIIGLISTILVMFQWWRDIVRESTFQGHHTPTVQKGLRYGMALFITSEAFFFLGFFWAFFHSSLAPTPELGGQWPPVGIKPLNPMDVPLLNTAILLASGVTVTWAHHSITEASRKQAIHALLLTVLLGFYFTALQAMEYYEAPFSIADGVYGSTFFVATGFHGLHVIIGSTFLLVCLLRLIKYHFTPNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS
SIO_010081: JXX56_mgp07
subclass of: SO_0000673
so part of: JXX56_mgp07
location: 8705..9489
location: region:8705-9489:1
so has part: feature:8705-9489:1:exon

YP_010000462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8705-9489:1:exon

JXX56_mgt15
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnG(ucc)
locus tag: JXX56_mgt15
so part of: sequence
location: 9489..9557
location: region:9489-9557:1
so has part: feature:9489-9557:1:exon
subclass of: SO_0000663

63024186
type: Gene
SIO_000068: ncbigene

position:9557:1
position: 9557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9489-9557:1:exon

JXX56_mgt15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnG(ucc)
locus tag: JXX56_mgt15
product: tRNA-Gly
SIO_010081: JXX56_mgt15
subclass of: SO_0000673
so part of: JXX56_mgt15
location: 9489..9557
location: region:9489-9557:1
so has part: feature:9489-9557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9489-9557:1:exon

JXX56_mgp06
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: ND3
locus tag: JXX56_mgp06
so part of: sequence
location: 9558..9908
location: region:9558-9908:1
so has part: feature:9558-9908:1:exon
subclass of: SO_0000010

63024187
type: Gene
SIO_000068: ncbigene

position:9558:1
position: 9558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9908:1
position: 9908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9558-9908:1:exon

JXX56_mgp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: ND3
locus tag: JXX56_mgp06
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNTVMFTFIASLTLSILLTALNFWLSQTNPDADKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAVQLQYPAMTLVWSTALILVLTLGLVYEWIQGGLEWAE
SIO_010081: JXX56_mgp06
subclass of: SO_0000673
so part of: JXX56_mgp06
location: 9558..9908
location: region:9558-9908:1
so has part: feature:9558-9908:1:exon

YP_010000463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9558-9908:1:exon

JXX56_mgt16
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnR(ucg)
locus tag: JXX56_mgt16
so part of: sequence
location: 9910..9979
location: region:9910-9979:1
so has part: feature:9910-9979:1:exon
subclass of: SO_0000663

63024188
type: Gene
SIO_000068: ncbigene

position:9910:1
position: 9910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9979:1
position: 9979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9910-9979:1:exon

JXX56_mgt16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnR(ucg)
locus tag: JXX56_mgt16
product: tRNA-Arg
SIO_010081: JXX56_mgt16
subclass of: SO_0000673
so part of: JXX56_mgt16
location: 9910..9979
location: region:9910-9979:1
so has part: feature:9910-9979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9910-9979:1:exon

JXX56_mgp05
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: ND4L
locus tag: JXX56_mgp05
so part of: sequence
location: 9981..10277
location: region:9981-10277:1
so has part: feature:9981-10277:1:exon
subclass of: SO_0000010

63024189
type: Gene
SIO_000068: ncbigene

position:9981:1
position: 9981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10277:1
position: 10277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9981-10277:1:exon

JXX56_mgp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: ND4L
locus tag: JXX56_mgp05
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MSYLHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYVALAMWPIQMQSSSSTIIPIIMLTFSACEAGTGLALLVASTRTHGSDYLHNFNLLRC
SIO_010081: JXX56_mgp05
subclass of: SO_0000673
so part of: JXX56_mgp05
location: 9981..10277
location: region:9981-10277:1
so has part: feature:9981-10277:1:exon

YP_010000464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9981-10277:1:exon

JXX56_mgp04
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: ND4
locus tag: JXX56_mgp04
so part of: sequence
location: 10271..11648
location: region:10271-11648:1
so has part: feature:10271-11648:1:exon
subclass of: SO_0000010

63024190
type: Gene
SIO_000068: ncbigene

position:10271:1
position: 10271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11648:1
position: 11648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10271-11648:1:exon

JXX56_mgp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: ND4
locus tag: JXX56_mgp04
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11648,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKIIIPTFMLLPLTFLSTPKHLWTNITTHSLLIATVSLQWLTPTYYPSKGLTPWTSIDQISSPLLVLSCWLLPLMIMASQNHLEQEPAIRKRVFTTTILLAQLSLLTAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAILHLQNQTGTLYLPMLKLSHPTLNTSWSGLITTLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVNPSSSNLHYPFITLALWGAVMTSAICLRQIDLKALIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMTIWWLLANLTNMAVPPTTNLMAELTIVISLFNWSSFTIILTGAAILLTASYTLYMLITTQRGTLPSHITSIQNSSTREHLLMALHMIPMALLILKPELISGAPM
SIO_010081: JXX56_mgp04
subclass of: SO_0000673
so part of: JXX56_mgp04
location: 10271..11648
location: region:10271-11648:1
so has part: feature:10271-11648:1:exon

YP_010000465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10271-11648:1:exon

JXX56_mgt17
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnH(gug)
locus tag: JXX56_mgt17
so part of: sequence
location: 11649..11718
location: region:11649-11718:1
so has part: feature:11649-11718:1:exon
subclass of: SO_0000663

63024191
type: Gene
SIO_000068: ncbigene

position:11649:1
position: 11649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11718:1
position: 11718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11649-11718:1:exon

JXX56_mgt17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnH(gug)
locus tag: JXX56_mgt17
product: tRNA-His
SIO_010081: JXX56_mgt17
subclass of: SO_0000673
so part of: JXX56_mgt17
location: 11649..11718
location: region:11649-11718:1
so has part: feature:11649-11718:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11649-11718:1:exon

JXX56_mgt18
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnS(gcu)
locus tag: JXX56_mgt18
so part of: sequence
location: 11719..11784
location: region:11719-11784:1
so has part: feature:11719-11784:1:exon
subclass of: SO_0000663

63024192
type: Gene
SIO_000068: ncbigene

position:11719:1
position: 11719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11784:1
position: 11784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11719-11784:1:exon

JXX56_mgt18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnS(gcu)
locus tag: JXX56_mgt18
product: tRNA-Ser
SIO_010081: JXX56_mgt18
subclass of: SO_0000673
so part of: JXX56_mgt18
location: 11719..11784
location: region:11719-11784:1
so has part: feature:11719-11784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11719-11784:1:exon

JXX56_mgt19
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnL(uag)
locus tag: JXX56_mgt19
so part of: sequence
location: 11784..11854
location: region:11784-11854:1
so has part: feature:11784-11854:1:exon
subclass of: SO_0000663

63024193
type: Gene
SIO_000068: ncbigene

position:11854:1
position: 11854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11784-11854:1:exon

JXX56_mgt19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnL(uag)
locus tag: JXX56_mgt19
product: tRNA-Leu
SIO_010081: JXX56_mgt19
subclass of: SO_0000673
so part of: JXX56_mgt19
location: 11784..11854
location: region:11784-11854:1
so has part: feature:11784-11854:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11784-11854:1:exon

JXX56_mgp03
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: ND5
locus tag: JXX56_mgp03
so part of: sequence
location: 11855..13672
location: region:11855-13672:1
so has part: feature:11855-13672:1:exon
subclass of: SO_0000010

63024194
type: Gene
SIO_000068: ncbigene

position:11855:1
position: 11855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13672:1
position: 13672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11855-13672:1:exon

JXX56_mgp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: ND5
locus tag: JXX56_mgp03
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MDLPLVLNTFMLLTLVTLSTPILFPLLSDNLKNTPATITSTVKTSFLISLIPMTIYIHSGAESLTTLWEWKFIMTFKIPISLKMDFYSLTFFPIALFVSWSILQFATWYMASDPYITKFFTYLLFFLMAMLILIAANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRIGDIGLIMCMAWLASAMNTWEIHQLQSPYQVPTLPLLGLVLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTILTLCLCLGALSTMFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPELAFLHISTHAFFKAMLFLCSGSIIHSLNGEQDIRKMGGLQKMLPTTTSCLTIGNLALMGTPFLAGFYSKDQIIESLSTSYLNAWALILTLLATSFTAVYTIRMTVLVQTGFVRIPTLTPMNENNPAVISPITRLAIGSITAGLLITSFIPPAKTPPMTMPLSIKMTAILVTALGIALALEMSKMAQAYIKTKQTPFSNFSTSLGYFNPLVHRLGMTNSLNGGQNIASHLIDLSWFKTLGPEGLANLQVMAAKTATSSHSGQIKAYLGSFALSIIIILISTY
SIO_010081: JXX56_mgp03
subclass of: SO_0000673
so part of: JXX56_mgp03
location: 11855..13672
location: region:11855-13672:1
so has part: feature:11855-13672:1:exon

YP_010000466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11855-13672:1:exon

JXX56_mgp02
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: CYTB
locus tag: JXX56_mgp02
so part of: sequence
location: 13681..14823
location: region:13681-14823:1
so has part: feature:13681-14823:1:exon
subclass of: SO_0000010

63024195
type: Gene
SIO_000068: ncbigene

position:13681:1
position: 13681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14823:1
position: 14823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13681-14823:1:exon

JXX56_mgp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: CYTB
locus tag: JXX56_mgp02
codon start: 1
transl table: 2
product: cytochrome b
translation: MAPNLRKNHELLKIINDALIDLPTPSNISSWWNFGSILGVCLITQIVTGLLLAMHYTADTSLAFSSVAHMCRDVQFGWLIRNLHANGASFFFICIYLHIGRGIYYGSYLNTKTWNVGVILLLALMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLVHLTFLHETGSNNPMGIPSDCDKIPFHPYYTTKDALGFALMLALLASLALFSPNMLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLLPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASISYFVIILVLFPLAAALENKMLKL
SIO_010081: JXX56_mgp02
subclass of: SO_0000673
so part of: JXX56_mgp02
location: 13681..14823
location: region:13681-14823:1
so has part: feature:13681-14823:1:exon

YP_010000467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13681-14823:1:exon

JXX56_mgt20
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnT(ugu)
locus tag: JXX56_mgt20
so part of: sequence
location: 14827..14895
location: region:14827-14895:1
so has part: feature:14827-14895:1:exon
subclass of: SO_0000663

63024196
type: Gene
SIO_000068: ncbigene

position:14827:1
position: 14827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14895:1
position: 14895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14827-14895:1:exon

JXX56_mgt20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnT(ugu)
locus tag: JXX56_mgt20
product: tRNA-Thr
SIO_010081: JXX56_mgt20
subclass of: SO_0000673
so part of: JXX56_mgt20
location: 14827..14895
location: region:14827-14895:1
so has part: feature:14827-14895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14827-14895:1:exon

JXX56_mgt21
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnP(ugg)
locus tag: JXX56_mgt21
so part of: sequence
location: complement(14908..14977)
location: region:14908-14977:-1
so has part: feature:14908-14977:-1:exon
subclass of: SO_0000663

63024197
type: Gene
SIO_000068: ncbigene

position:14908:-1
position: 14908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14977:-1
position: 14977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14908-14977:-1:exon

JXX56_mgt21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnP(ugg)
locus tag: JXX56_mgt21
product: tRNA-Pro
SIO_010081: JXX56_mgt21
subclass of: SO_0000673
so part of: JXX56_mgt21
location: complement(14908..14977)
location: region:14908-14977:-1
so has part: feature:14908-14977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14908-14977:-1:exon

JXX56_mgp01
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: ND6
locus tag: JXX56_mgp01
so part of: sequence
location: complement(14989..15507)
location: region:14989-15507:-1
so has part: feature:14989-15507:-1:exon
subclass of: SO_0000010

63024198
type: Gene
SIO_000068: ncbigene

position:14989:-1
position: 14989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15507:-1
position: 15507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14989-15507:-1:exon

JXX56_mgp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 187451
gene: ND6
locus tag: JXX56_mgp01
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MMEFVLFLGLLFTLGGLAVASNPSPYYGVVGLVVAAVAGGGWLVSLGVSFVSLVLVMVYLGGMLVVFVYSVSLAADPYPETWTDWGVVGYGFGMGLVVMVGLVVSGVLGVLADVSTANGSGLLSVRVDFSGAAVLYSEGAGFLLIGGWGLLLTLFVVLELVRGLSRGAIRAV
SIO_010081: JXX56_mgp01
subclass of: SO_0000673
so part of: JXX56_mgp01
location: complement(14989..15507)
location: region:14989-15507:-1
so has part: feature:14989-15507:-1:exon

YP_010000468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14989-15507:-1:exon

JXX56_mgt22
type: Gene
subclass of: SO_0000704
RO_0002162: 187451
gene: trnE(uuc)
locus tag: JXX56_mgt22
so part of: sequence
location: complement(15509..15580)
location: region:15509-15580:-1
so has part: feature:15509-15580:-1:exon
subclass of: SO_0000663

63024199
type: Gene
SIO_000068: ncbigene

position:15509:-1
position: 15509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15580:-1
position: 15580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15509-15580:-1:exon

JXX56_mgt22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 187451
gene: trnE(uuc)
locus tag: JXX56_mgt22
product: tRNA-Glu
SIO_010081: JXX56_mgt22
subclass of: SO_0000673
so part of: JXX56_mgt22
location: complement(15509..15580)
location: region:15509-15580:-1
so has part: feature:15509-15580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15509-15580:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 187451
note: putative control region
so part of: sequence
location: 15581..16874
location: region:15581-16874:1
so has part: feature:15581-16874:1:region

position:15581:1
position: 15581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15581-16874:1:region