Acinetobacter defluvii strain WCHA30 plasmid p2_010030, complete sequence.
Bacteria; Proteobacteria; Gammaproteobacteria; Moraxellales; Moraxellaceae; Acinetobacter.
The complete genome of Acinetobacter defluvii strain WCHAD010030
Submitted (16-AUG-2019) Center of Infectious Diseases, West China Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan 610041, China
Submitted (15-MAY-2018) Center of Infectious Diseases, West China Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan 610041, China
Submitted (06-JUL-2016) Center of Infectious Diseases, West China Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan 610041, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP029390.2.\n\nOn Aug 26, 2019 this sequence version replaced NZ_CP029390.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.5\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 200.0x\nSequencing Technology :: Illumina HiSeq; MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/30/2022 06:58:20\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,717\nCDSs (total) :: 3,614\nGenes (coding) :: 3,523\nCDSs (with protein) :: 3,523\nGenes (RNA) :: 103\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 78\nncRNAs :: 4\nPseudo Genes (total) :: 91\nCDSs (without protein) :: 91\nPseudo Genes (ambiguous residues) :: 0 of 91\nPseudo Genes (frameshifted) :: 36 of 91\nPseudo Genes (incomplete) :: 56 of 91\nPseudo Genes (internal stop) :: 29 of 91\nPseudo Genes (multiple problems) :: 24 of 91\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF013540.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_000857160.1
COORDINATES: similar to AA sequence:RefSeq:WP_001031297.1
COORDINATES: similar to AA sequence:RefSeq:WP_005199240.1
COORDINATES: similar to AA sequence:RefSeq:WP_000110201.1
COORDINATES: similar to AA sequence:RefSeq:WP_004674113.1
COORDINATES: similar to AA sequence:RefSeq:WP_016658858.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_009044823.1