Sulfurospirillum diekertiae strain JPD-1 chromosome, complete genome.
type: Entry
definition: Sulfurospirillum diekertiae strain JPD-1 chromosome, complete genome.
sequence version: NZ_CP023275.1
sequence date: 2023-03-13
sequence: sequence
division: CON
label: NZ_CP023275.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN07609062
keyword: RefSeq
source: Sulfurospirillum diekertiae
organism: Sulfurospirillum diekertiae
taxonomy: Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Sulfurospirillaceae; Sulfurospirillum.
reference: 1
references: 33242236
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP023275.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Coverage :: 169x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/13/2023 05:22:42\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,898\nCDSs (total) :: 2,838\nGenes (coding) :: 2,819\nCDSs (with protein) :: 2,819\nGenes (RNA) :: 60\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 3\nPseudo Genes (total) :: 19\nCDSs (without protein) :: 19\nPseudo Genes (ambiguous residues) :: 0 of 19\nPseudo Genes (frameshifted) :: 10 of 19\nPseudo Genes (incomplete) :: 7 of 19\nPseudo Genes (internal stop) :: 2 of 19\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 2814086
topology: circular
so has quality: SO_0000988
location: 1..2814086
location: region:1-2814086:1
RO_0002162: 1854492

NZ_CP023275
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN07609062
type: BioSample
SIO_000068: biosample

1
title: Tetrachloroethene respiration in Sulfurospirillum species is regulated by a two-component system as unraveled by comparative genomics, transcriptomics, and regulator binding studies
author: Esken, J.
author: Goris, T.
author: Gadkari, J.
author: Bischler, T.
author: Forstner, K.U.
author: Sharma, C.M.
author: Diekert, G.
author: Schubert, T.
journal: Microbiologyopen 9 (12), e1138 (2020)
pubmed: 33242236

33242236
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Goris, T.
journal: Submitted (07-SEP-2017) Applied and Ecological Microbiology, Friedrich Schiller University, Philosophenweg 12, Jena 07743, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2814086:1
position: 2814086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2814086:1:source
so part of: sequence
organism: Sulfurospirillum diekertiae
mol type: genomic DNA
strain: JPD-1
isolation source: aquifer contaminated with chlorinated ethenes
culture collection: DSM:16452
country: USA: Tacoma, Washington
collection date: 2000

1854492
type: Taxonomy
SIO_000068: taxonomy

SJPD1_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: dnaA
locus tag: SJPD1_RS00005
old locus tag: SJPD1_0001
so part of: sequence
location: 160..1485
location: region:160-1485:1
so has part: feature:160-1485:1:exon
subclass of: SO_0000010

position:160:1
position: 160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1485:1
position: 1485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160-1485:1:exon

SJPD1_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: dnaA
locus tag: SJPD1_RS00005
old locus tag: SJPD1_0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009494753.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MLADTVIELLKGEIASLEYDRYIKQLKFHEKASNSDQMVFLAPNILIANWVRTKYADKIAHLFELKTGKKSEIKIVLKEHLKTTKVKTTPIEIIDAIKNTKNTILNPSYTFDSFVVGSSNQYAYTAAKSIAEKPGVMYNPVFIYGPTGLGKTHLIHAIGNYAQAKGKIVIYATIEQFMNDFTYNLRNQSMDRFREKYRNCDVLLIDDTQFLSNKIQTQEEFFHTFNELHSAGKQIVLTSDKPPKMINGLEDRLKSRFEWGLIADIGLPELETKIAIIKKKCELDGINLNSDIVNYIAANMGDNIREIESAIINLNAYASLMRQEITLDFAKNVMREQIKERRENISLEDIIQIIAKDLNIKPSEIKSTKRSKNIVEARRIGIYLARTLTPNSMPSLATYFGMKDHTAVSHNIKKINELIETNESFKLKVEDLKNKILTKQI
SIO_010081: SJPD1_RS00005
subclass of: SO_0000673
so part of: SJPD1_RS00005
location: 160..1485
location: region:160-1485:1
so has part: feature:160-1485:1:exon

WP_096045403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160-1485:1:exon

SJPD1_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: dnaN
locus tag: SJPD1_RS00010
old locus tag: SJPD1_0002
so part of: sequence
location: 1641..2708
location: region:1641-2708:1
so has part: feature:1641-2708:1:exon
subclass of: SO_0000010

position:1641:1
position: 1641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2708:1
position: 2708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1641-2708:1:exon

SJPD1_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: dnaN
locus tag: SJPD1_RS00010
old locus tag: SJPD1_0002
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768225.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKVSIKKSILENMLLNIQPYLEKKDLSQITSHVLLMAEETQFTLKATDYEIGLSYHTPEIKISVAGNATANGKKLLDIIKGLKDDEVILETINDYLYIKQNSSKFKLPMLSPSDFPPFPEIDSKPKFDINSNTLVRSIKKIAPAIDSNNPKFELNGSLIDIKDNSISLVATDTKRLAIMKIEQPTEHDFSLIIPKKAISEIQKLFFDNIEIFYDENTLIASSAHFTFFTKLINGKFPDYQRIIPKNKNYRILLNRESMVESIKQISIISPEIKITFKPDKIVFESLNDDNIEAKTEIDFKTGLESDIYLAVNSRYILDFLSNIENSNFTLGFNDSGLPFTLESDNFTTIVMPIMI
SIO_010081: SJPD1_RS00010
subclass of: SO_0000673
so part of: SJPD1_RS00010
location: 1641..2708
location: region:1641-2708:1
so has part: feature:1641-2708:1:exon

WP_096045404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1641-2708:1:exon

SJPD1_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: gyrB
locus tag: SJPD1_RS00015
old locus tag: SJPD1_0003
so part of: sequence
location: 2824..5136
location: region:2824-5136:1
so has part: feature:2824-5136:1:exon
subclass of: SO_0000010

position:2824:1
position: 2824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5136:1
position: 5136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2824-5136:1:exon

SJPD1_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: gyrB
locus tag: SJPD1_RS00015
old locus tag: SJPD1_0003
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855809.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MSTYGADNIKVLKGLEAVRKRPGMYIGDTNINGLHHLIYEVVDNSIDEAMAGYCDLIKVELTREGSCIVIDNGRGIPVGWHEGENMSAATVVLTVLHAGGKFDKDTYKVSGGLHGVGVSVVNALSSKLIATIKREGNEHRQEFACGIPQTPLGVVKTTNRTGTMIEFWPDGTIFETTEFQFEILATRFRELAYLNPKIRIELKDQRDGRAEVYHFEGGIKQFVMDLNKKEKVAEAVHYTASIDDVEVDVAMMYNSTYSEIFYSFVNNIKTIDGGTHESGFRAGLTRAITNYISLNAGAREKDAKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSSYVKPIVQKLVYEQLVKYFEENPIEAKAIMNKALAAARGREAAKNARDLTRRKDAMSIGTLPGKLADCQSKDPSICELYLVEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSRLDKILKSDEIKNMITALGCGIGDEFNEEKLRYHKLIIMTDADVDGSHIQTLLLTFLFRFLRPIVDNGYVYLAQPPLYRYKKGKKEIYLKDDHEMNAFLIESGMDSIAIEGVGTPDLVDYFKIISAYRGILKELEKRFAMIEVIRYLIENPDLIVLPTEGLFVEIQKFITNLGYNILNHYINDEGIHLFIQTKDGLEELLLDETFYTNPLYEEARYIYTKIQERDFDVFDGKDPVEVLDEIEKSAKKGAYIQRYKGLGEMNPEQLWETTMNPENRRLLQVKVEDAEAASDTFTLFMGDEVEPRRQYIQDHAKDVKHLDV
SIO_010081: SJPD1_RS00015
subclass of: SO_0000673
so part of: SJPD1_RS00015
location: 2824..5136
location: region:2824-5136:1
so has part: feature:2824-5136:1:exon

WP_096045405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2824-5136:1:exon

SJPD1_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00020
old locus tag: SJPD1_0004
so part of: sequence
location: 5136..6551
location: region:5136-6551:1
so has part: feature:5136-6551:1:exon
subclass of: SO_0000010

position:6551:1
position: 6551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5136-6551:1:exon

SJPD1_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00020
old locus tag: SJPD1_0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768227.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MLYSEIKERENRFITALKIAFPFLLLIGIFFHAFQLFPYTSVNFILLILLIPIYVYYTVYLIYHGFQTTLIDPTTKTFTRMEIMTKIENIKDRENTTIIFLHVNNFSDINERYGIHNGDILLFHFIQKLEFFLREHHFKNVSIGRYSNDSFLFYIKNPSKELRHLLTIFTKSVQNVGISNIEIKVDFSLLSAAYDSDTKNIIEHLLMLIEEQKKSEEIMPNIKLNQFQMIIDEAIKYHQLFFKYQPSLSLETEKIEIVEVLTRMESQTYGLLSKQQIQRIVNHTGYEKIFDEKVFELLVEEILPLLEKEVLLSIEISPVTLRNLSFKHYLITLFEKKNIAPNRFILEFTEKKSYENMHRFREIIESYQEVGFKIALGNFGGNNCSFEYLKHLPIDLVKFDIEFTKKIDDSKYQQLLLHYVELIQTLHIQSMVKFVDKEAYFQKMKEMKPDYIQGFCISKPKNLEQIVGDIL
SIO_010081: SJPD1_RS00020
subclass of: SO_0000673
so part of: SJPD1_RS00020
location: 5136..6551
location: region:5136-6551:1
so has part: feature:5136-6551:1:exon

WP_096045406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5136-6551:1:exon

SJPD1_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: queF
locus tag: SJPD1_RS00025
old locus tag: SJPD1_0005
so part of: sequence
location: 6548..6943
location: region:6548-6943:1
so has part: feature:6548-6943:1:exon
subclass of: SO_0000010

position:6548:1
position: 6548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6943:1
position: 6943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6548-6943:1:exon

SJPD1_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: queF
locus tag: SJPD1_RS00025
old locus tag: SJPD1_0005
EC number: 1.7.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768228.1
GO function: GO:0033739 - preQ1 synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preQ(1) synthase
translation: MKYGEQIIKEFDVEKDLEIWPNQHKKNYVIKLTLPEFCCLCPRSGYPDFATIYIDYTPDELVVELKAIKLYINSFMNRNISHENSANEIYDLLDRKLKPKWLKVVADFNPRGNVHTVIEIDSKQVRNESSC
SIO_010081: SJPD1_RS00025
subclass of: SO_0000673
so part of: SJPD1_RS00025
location: 6548..6943
location: region:6548-6943:1
so has part: feature:6548-6943:1:exon

WP_096045407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6548-6943:1:exon

SJPD1_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00030
old locus tag: SJPD1_0006
so part of: sequence
location: 6937..8148
location: region:6937-8148:1
so has part: feature:6937-8148:1:exon
subclass of: SO_0000010

position:6937:1
position: 6937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8148:1
position: 8148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6937-8148:1:exon

SJPD1_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00030
old locus tag: SJPD1_0006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855812.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MLSPKLIEQFFGAASIQRWNDYPRMVELVELDKQAHKFIIAYLIAKMEPKESINMRSLIEAGIFEFLRRVVVTDIRPDVFRKALQKKEKEINTWVLEQLYDSLSDIEEGAFYERFKTYLNDSSMYKKERFILKAASYMATRWEFSIVYQTSQFLNNIDRVKEAVEEEIEDYYELISVRKMAMNKKISKIVDLSGRLRFQKRWAQTPRIPETSVLGHMLIVAILGYFYSLSAKACDGRLVNNFFCALFHDFPEALTRDIISPVKYSVSGLDDIISEFEIKMIEEEILPYLPEGLTKEFKYLLGLYGDNQKDEFMNRINEHEIKMVEDVSAYNEEKYNAIDGKALKNCDNLAAFIEATLSISHGVRSKELIQGKEHIRGKLKEKGKIGNVDFYELALEIETYLGV
SIO_010081: SJPD1_RS00030
subclass of: SO_0000673
so part of: SJPD1_RS00030
location: 6937..8148
location: region:6937-8148:1
so has part: feature:6937-8148:1:exon

WP_096045408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6937-8148:1:exon

SJPD1_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: ffs
locus tag: SJPD1_RS00035
so part of: sequence
location: complement(8168..8265)
location: region:8168-8265:-1
so has part: feature:8168-8265:-1:exon
subclass of: SO_0000642

position:8168:-1
position: 8168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8265:-1
position: 8265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8168-8265:-1:exon

SJPD1_RS00035
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1854492
nc RNA class: SRP_RNA
gene: ffs
locus tag: SJPD1_RS00035
product: signal recognition particle sRNA small type
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00169
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SJPD1_RS00035
subclass of: SO_0000673
so part of: SJPD1_RS00035
location: complement(8168..8265)
location: region:8168-8265:-1
so has part: feature:8168-8265:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8168-8265:-1:exon

SJPD1_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00040
old locus tag: SJPD1_0007
so part of: sequence
location: 8317..8991
location: region:8317-8991:1
so has part: feature:8317-8991:1:exon
subclass of: SO_0000010

position:8317:1
position: 8317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8991:1
position: 8991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8317-8991:1:exon

SJPD1_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00040
old locus tag: SJPD1_0007
EC number: 3.2.2.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768230.1
GO function: GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MVDPKIEESWKNVLREEFQKPYFEALKSFLVEEKTHYTVYPSGANIFAAFDNTPFESVEVVILGQDPYHGASQAHGLSFSVQDGIQHPPSLQNIFKELKDDLGCTIPKNGNLTAWAKQGVFLLNTVLTVRASEANSHRGQGWENFTDAVIKTLSTEKEHLVFILWGSPAGAKASLIDGKKHLILRAPHPSPLSSYRGFFGSKPFSKSNEYLTCNGKKPINWCLA
SIO_010081: SJPD1_RS00040
subclass of: SO_0000673
so part of: SJPD1_RS00040
location: 8317..8991
location: region:8317-8991:1
so has part: feature:8317-8991:1:exon

WP_096047754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8317-8991:1:exon

SJPD1_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: mutY
locus tag: SJPD1_RS00045
old locus tag: SJPD1_0008
so part of: sequence
location: 8979..9956
location: region:8979-9956:1
so has part: feature:8979-9956:1:exon
subclass of: SO_0000010

position:8979:1
position: 8979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9956:1
position: 9956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8979-9956:1:exon

SJPD1_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: mutY
locus tag: SJPD1_RS00045
old locus tag: SJPD1_0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011979704.1
GO function: GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: A/G-specific adenine glycosylase
translation: MLSLNVKEAIYAWYQKNGRHDLPWRQTTDAYKIYLSEIMLQQTQVKTVLERFYFPFLERFPTLKSVAEAPLDDVLKMWEGLGYYTRARNLHHTAITCKGVLPKRPEELGGLKGIGKSTAHAICSFAYHQALPILDANVKRVLCRYFALSVKDEKVLWKKAWELLHVKQPYEHNQAMMDIGALVCTPKNPNCLECPLNFTCKGKDTPENYPQSLKKAKVPIKRRFALVALKEGKLGLIQRKERLLHGLWGFIQVDECPENAEILGKVTHTYSHFKLELEVVKCDLHVKVDDYFTPEQIATLALSTVDKKILYLPAMMGNVTPATPK
SIO_010081: SJPD1_RS00045
subclass of: SO_0000673
so part of: SJPD1_RS00045
location: 8979..9956
location: region:8979-9956:1
so has part: feature:8979-9956:1:exon

WP_226372212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8979-9956:1:exon

SJPD1_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00050
old locus tag: SJPD1_0009
so part of: sequence
location: complement(9912..11090)
location: region:9912-11090:-1
so has part: feature:9912-11090:-1:exon
subclass of: SO_0000010

position:9912:-1
position: 9912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11090:-1
position: 11090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9912-11090:-1:exon

SJPD1_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00050
old locus tag: SJPD1_0009
inference: COORDINATES: protein motif:HMM:TIGR00710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multidrug effflux MFS transporter
translation: MSKALTERQIVLVLASLSAITPLAIDMYLPSFPAIATDLHTSIPNVEFSLSLYFFGMAMGQLLGGPISDAYGRRPMVMIGLIVFGMSSLLLSITNQIEIFWILRALQSFGGGVATVNVSATVRDMFNGKESARIFSLIAMVMLMAPLLAPTLGALVLKFFEWEAIFLILGFYTLFALIFYLFRFPAIKQIRTKITPIQNYKTVLSHKLAMVFIVSQILCTSGMYTFITSSSFVYMEHFHVSASRFSLFFGVNVLMMMIFGRLNVWVVKRKDPLQLLRFGVIVQAIVGIMLFVLRDAGLFVIFPLVGLYVGILGFVFGNSVSLTLEFFPSISASANAIIGVLQYSVGALMGFIASSLHDDTLLPIMGVMMVVSLCGATLLLWGSRGYIPHHGG
SIO_010081: SJPD1_RS00050
subclass of: SO_0000673
so part of: SJPD1_RS00050
location: complement(9912..11090)
location: region:9912-11090:-1
so has part: feature:9912-11090:-1:exon

WP_096045410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9912-11090:-1:exon

SJPD1_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00055
old locus tag: SJPD1_0010
so part of: sequence
location: 11420..12829
location: region:11420-12829:1
so has part: feature:11420-12829:1:exon
subclass of: SO_0000010

position:11420:1
position: 11420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12829:1
position: 12829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11420-12829:1:exon

SJPD1_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00055
old locus tag: SJPD1_0010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012148043.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO process: GO:0006820 - monoatomic anion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DASS family sodium-coupled anion symporter
translation: MSKRIISILVPVLVLLIVWFSPIPSGLTIQAWHYMAIFLAVIVGLVIEPVPAALVGLIGVSLMALIGLAGKTPAANVKWALSGFSNSTIWLIFAAFMFAMGYQKTGLGKRISLIMIRYMGKSSLGLGYAVAFADLVLAPFMPSNTARGGGTIFPIAINIPIIFNSTPEHEPRKMGAYITWIAMSATCVTSSMFLTALAPNLLAIDLIAKGANIFITWGAWAKIMVPLMLPLFLVTPLLVYWIYPPTQKQSPEAPAWAKDELKKMGTIALKEILMGSFAFLALILWIFGKELNVDATIAAISITVLMVLTNVVSWDDVIGNKPAWNILVWFATLVALASGLKDVGILAWMGKGTEVYLSGLSPTMLMILMIVLFFLLHYFFASLTAHTTALLPIFIVIASKLIAPDQLMTFMILLTSTIGLMGIITPYGTGPSPIWYGAGYISQGKWWALGAIFATIFMAVLLVGALIFL
SIO_010081: SJPD1_RS00055
subclass of: SO_0000673
so part of: SJPD1_RS00055
location: 11420..12829
location: region:11420-12829:1
so has part: feature:11420-12829:1:exon

WP_096045411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11420-12829:1:exon

SJPD1_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: ttdA
locus tag: SJPD1_RS00060
old locus tag: SJPD1_0011
so part of: sequence
location: 12858..13757
location: region:12858-13757:1
so has part: feature:12858-13757:1:exon
subclass of: SO_0000010

position:12858:1
position: 12858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13757:1
position: 13757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12858-13757:1:exon

SJPD1_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: ttdA
locus tag: SJPD1_RS00060
old locus tag: SJPD1_0011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002952275.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L(+)-tartrate dehydratase subunit alpha
translation: MFVLDQKEMMTQTLGKFVDLVSKELPDDVMAKLKELRVQEEQPLAKAIYDVMFENMDKAKKLSRPTCQDTGVIQYFVRTGAKFPYLGQLREILKEATILATKSAPLRLNAVEVFDEVNTGTNVGTDVPYITWEIVDDSTNVEIEVYQAGGGCSLPGRSIVLPPLAGYEGAMQFVFDTVVNWGINACPPLIVGIGIGTCSNSSALLSKKAMLRPVGTHNPHPKAAEMERTVEKGLNDIGLGPQGISGKNSVMAVHIEGMAHHPSVLGVGVTIGCWANRHGVIRFDEHMNYEIVSHKGATL
SIO_010081: SJPD1_RS00060
subclass of: SO_0000673
so part of: SJPD1_RS00060
location: 12858..13757
location: region:12858-13757:1
so has part: feature:12858-13757:1:exon

WP_096045412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12858-13757:1:exon

SJPD1_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: ttdB
locus tag: SJPD1_RS00065
old locus tag: SJPD1_0012
so part of: sequence
location: 13754..14368
location: region:13754-14368:1
so has part: feature:13754-14368:1:exon
subclass of: SO_0000010

position:13754:1
position: 13754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14368:1
position: 14368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13754-14368:1:exon

SJPD1_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: ttdB
locus tag: SJPD1_RS00065
old locus tag: SJPD1_0012
EC number: 4.2.1.32
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768236.1
GO function: GO:0016836 - hydro-lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L(+)-tartrate dehydratase subunit beta
translation: MKKILTTPISDEAIKSLKVGDIVYLSGTLVTCRDEGHRRIIAEGIMPKLPMDRIAIFHAGPIVKDVEGGWEMVSIGPTTSMRMERYEKEFLAKTGVKLVIGKGGMGAKTAEGCKESTAVHAVFPGGCGVVAAEQVEKIEGKEWPEFGMPEAFWILKVKEFGPLIISIDAEGNNLFEANKVTFHERKDEALAKTSKHIVSMIAKS
SIO_010081: SJPD1_RS00065
subclass of: SO_0000673
so part of: SJPD1_RS00065
location: 13754..14368
location: region:13754-14368:1
so has part: feature:13754-14368:1:exon

WP_096045413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13754-14368:1:exon

SJPD1_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00070
old locus tag: SJPD1_0013
so part of: sequence
location: complement(14401..15051)
location: region:14401-15051:-1
so has part: feature:14401-15051:-1:exon
subclass of: SO_0000010

position:14401:-1
position: 14401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15051:-1
position: 15051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14401-15051:-1:exon

SJPD1_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00070
old locus tag: SJPD1_0013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855817.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MINLKKIQMLPAREQVASILRSSILSGGISKGQSITLDSVGEQVGMSRTPVREAFQILANEGLLELRQNRCAIVKGISEEAIKDHYEMRILLETEALRRACEHMNDETLKAIQNVNKQGQRAEQAGDTEAYNLANQAFHMTIWEAADSEKLKSFLSLLWNGLSMNRLVTAQEYAGISLADHNKIVEQLTAKDYAGACETMRQHIIYSMNSTLSNFK
SIO_010081: SJPD1_RS00070
subclass of: SO_0000673
so part of: SJPD1_RS00070
location: complement(14401..15051)
location: region:14401-15051:-1
so has part: feature:14401-15051:-1:exon

WP_096045414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14401-15051:-1:exon

SJPD1_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00075
old locus tag: SJPD1_0014
so part of: sequence
location: 15287..16537
location: region:15287-16537:1
so has part: feature:15287-16537:1:exon
subclass of: SO_0000010

position:15287:1
position: 15287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16537:1
position: 16537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15287-16537:1:exon

SJPD1_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00075
old locus tag: SJPD1_0014
inference: COORDINATES: protein motif:HMM:TIGR02086.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase large subunit
translation: MHAIEKLLAKKAGKASVKTGEIINCEVDMAGINDLYLQTLRSFFEMGGTKVYDPSRVIMFLDHYAPASTITQAANQKQFREFCWDQGIDLLMDIDQGVCHQVLADKGLAYPGEIVVITDSHTTTHGAFGAFGTGVGATDLAIILATGKLWFRVPEIIKINFEGKLPKGVYAKDAILHAIGALGADYAVYKAVEFGGSMLEHLSISERMALCNMSTEMGAKASYIQPDAITMAFLKERVTRPYEIYHTDADFKYADEVSFDVRELKPQLAAPSSVDNVYDLSQFIGRHIDQAYLGSCTGGRADDIGIAAHILKGKKVASRTRFVIVPASKGVLLEAMEKGYVKTLIEAGATFVTPGCAACLGTHEGMIASGETCITTTNRNFPGRMGDTKAEIFLGSPAAVAAAALMGEIVDPTLYM
SIO_010081: SJPD1_RS00075
subclass of: SO_0000673
so part of: SJPD1_RS00075
location: 15287..16537
location: region:15287-16537:1
so has part: feature:15287-16537:1:exon

WP_096045415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15287-16537:1:exon

SJPD1_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00080
old locus tag: SJPD1_0015
so part of: sequence
location: 16548..17057
location: region:16548-17057:1
so has part: feature:16548-17057:1:exon
subclass of: SO_0000010

position:16548:1
position: 16548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17057:1
position: 17057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16548-17057:1:exon

SJPD1_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00080
old locus tag: SJPD1_0015
inference: COORDINATES: protein motif:HMM:TIGR02087.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase
translation: MQKLLSGNAFVFGKNVDTDQIYPGRFVEFTDVEDVAKYAMFGADPDFTKKVKKGDFIVAGTNFGCGSSREHAAITLKAVGVGAIIAESFARIFYRNAINLGVPLLVCPNISKLIHMNDALSINLQSGTIRSEKGLIATAEPLSEYVLHILESGGIKPLIKNQLEAQKHA
SIO_010081: SJPD1_RS00080
subclass of: SO_0000673
so part of: SJPD1_RS00080
location: 16548..17057
location: region:16548-17057:1
so has part: feature:16548-17057:1:exon

WP_096045416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16548-17057:1:exon

SJPD1_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00085
old locus tag: SJPD1_0016
so part of: sequence
location: 17185..17859
location: region:17185-17859:1
so has part: feature:17185-17859:1:exon
subclass of: SO_0000010

position:17185:1
position: 17185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17859:1
position: 17859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17185-17859:1:exon

SJPD1_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00085
old locus tag: SJPD1_0016
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKDIMTCLIVLCFLSGCGDTKKNDNNQVIGENSVEKIYQDAIKETILKTTKDPKAYQALSWKLLKSSEAVTKRLGKRAVFIDHAYKEKNIYGGEIKRDNIYFIGDSKPSLIIDFDMKLVFEEFLASQSMRDIFSQTIWNLETLQSEYQKRSNDLVAKEHIKDFMYSIHHYSKADQESLIQAITNANNPMFIAKNMAIFLTMRSFPELMEELLFDEITYKGKYK
SIO_010081: SJPD1_RS00085
subclass of: SO_0000673
so part of: SJPD1_RS00085
location: 17185..17859
location: region:17185-17859:1
so has part: feature:17185-17859:1:exon

WP_096045417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17185-17859:1:exon

SJPD1_RS14790
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS14790
old locus tag: SJPD1_0017
so part of: sequence
location: 17869..18504
location: region:17869-18504:1
so has part: feature:17869-18504:1:exon
subclass of: SO_0000010

position:17869:1
position: 17869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18504:1
position: 18504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17869-18504:1:exon

SJPD1_RS14790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS14790
old locus tag: SJPD1_0017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855819.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MKKFLYLLSFLTLCTSLSYADDLMNGLNAYEKSDYDSAVTFFQSGCDADNAEACYNLGNMYDSGLGVYKDKDDAKAVSLFTKSCDGGFSDGCYNLGIMYDTGEGVAKDAIKAFTLFYKSCESGHTRGCYSVALMYYKGQGVQKDYSKALSLFQKTCDEGYEKSCYNLGVMYRNGEGVAKNLDKALELYKRACEQNLSIACDKYGKLRNEMQ
SIO_010081: SJPD1_RS14790
subclass of: SO_0000673
so part of: SJPD1_RS14790
location: 17869..18504
location: region:17869-18504:1
so has part: feature:17869-18504:1:exon

WP_096045418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17869-18504:1:exon

SJPD1_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00095
old locus tag: SJPD1_0018
so part of: sequence
location: complement(18516..18603)
location: region:18516-18603:-1
so has part: feature:18516-18603:-1:exon
subclass of: SO_0000663

position:18516:-1
position: 18516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18603:-1
position: 18603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18516-18603:-1:exon

SJPD1_RS00095
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS00095
old locus tag: SJPD1_0018
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(18567..18569),aa:Ser,seq:gga)
SIO_010081: SJPD1_RS00095
subclass of: SO_0000673
so part of: SJPD1_RS00095
location: complement(18516..18603)
location: region:18516-18603:-1
so has part: feature:18516-18603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18516-18603:-1:exon

SJPD1_RS14865
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS14865
old locus tag: SJPD1_0019
so part of: sequence
location: complement(18707..19786)
location: region:18707-19786:-1
so has part: feature:18707-19786:-1:exon
subclass of: SO_0000010

position:18707:-1
position: 18707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19786:-1
position: 19786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18707-19786:-1:exon

SJPD1_RS14865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS14865
old locus tag: SJPD1_0019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004317191.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MFGGRRIAELETENQTLKNELETLKSEVIRHEQSQQKSLEETQNATPINQTKDELLTILLGSYEDGMNFLQNTIEESLTMLNEINTLNNASLKGGESIGIQTKDIAQSLEKVQELTQKFTHDVENLSSSVSAISDIINLIKDISDQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKATLEVESNISILKQNTNSMADTSETFQTESRASMKILEAFSGEITTMLSNSQSITNKCDNVTNEISVSNGKIDHILLKLQGYNAALSQKKIDILGHTSCRFGKWFGNISAKLNNAIVQEVSNHHIGVHDGLKKAIDAFATHSDSREGIELFRSVEKSSKIGFEKLIEAFKSIRKE
SIO_010081: SJPD1_RS14865
subclass of: SO_0000673
so part of: SJPD1_RS14865
location: complement(18707..19786)
location: region:18707-19786:-1
so has part: feature:18707-19786:-1:exon

WP_096045419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18707-19786:-1:exon

SJPD1_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00105
old locus tag: SJPD1_0020
so part of: sequence
location: complement(19867..20343)
location: region:19867-20343:-1
so has part: feature:19867-20343:-1:exon
subclass of: SO_0000010

position:19867:-1
position: 19867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20343:-1
position: 20343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19867-20343:-1:exon

SJPD1_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00105
old locus tag: SJPD1_0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011989606.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine permease
translation: MQMDILTHNHWLNNYVLNKEFSLLAGISSNAYRYWKDVEAAKFDDARVVFLRKESIIPKYKEIVKQCTNLTGMVQSQAFCKYTGLAPSHLIEHNNSCIYKALEIIDVCDIKLVNLQKFYDDLKLDYNYHIYIEKCKYFGPSPFEKKITLSSGICVGYY
SIO_010081: SJPD1_RS00105
subclass of: SO_0000673
so part of: SJPD1_RS00105
location: complement(19867..20343)
location: region:19867-20343:-1
so has part: feature:19867-20343:-1:exon

WP_096045420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19867-20343:-1:exon

SJPD1_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00110
old locus tag: SJPD1_0021
so part of: sequence
location: complement(20345..21928)
location: region:20345-21928:-1
so has part: feature:20345-21928:-1:exon
subclass of: SO_0000010

position:20345:-1
position: 20345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21928:-1
position: 21928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20345-21928:-1:exon

SJPD1_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00110
old locus tag: SJPD1_0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768242.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YidE/YbjL duplication
translation: MINNEIFYLFSIISVGYILGNIKVRGFSLDVTAMLIVALIAGHFGMVISDAFQYFGLAIFIYAVGLQSGPGFFDTIKHEGLKLNLIATALLVLLFVIIFGFGYFFEMPKTIIDGIFTGALTSVPALAAALEIKHTPTTSVIFGLVYPFGIVATVLFIRLLPVLFRVDLQKEVEEYESSQKVRFPDILTRNFRITNENFRNIEIKKSKIESMTSTVIERMTSDGAIDHTTEDVSLSFGDVIRVAGTEEQLANLSIVLGQEIGEEHEFQDNMIVLRLLTTSKEIVGKKIGMIKELKSLRAVITKVRRAGIDIPAYPSLTLRLGDKLYVVAPNAYGEKVTKLIGNDLLKYPAADFLPISLGVVFGILLGSIPLYIPGVGDIKLSFVGGILITALILGRLGRVGPIVWNLSPHSTTLLKTLGQLIFIATLGTNAGKYLVESLENNGILPIILALGALILSLGLITFICRKIFKMNFLDILGLLSGAMTSTPSLTMANNMTKTDYPSIAYAAVYPLGLVLVIVLAQLGMKIM
SIO_010081: SJPD1_RS00110
subclass of: SO_0000673
so part of: SJPD1_RS00110
location: complement(20345..21928)
location: region:20345-21928:-1
so has part: feature:20345-21928:-1:exon

WP_096045421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20345-21928:-1:exon

SJPD1_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00115
old locus tag: SJPD1_0022
so part of: sequence
location: complement(21999..22535)
location: region:21999-22535:-1
so has part: feature:21999-22535:-1:exon
subclass of: SO_0000010

position:21999:-1
position: 21999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22535:-1
position: 22535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21999-22535:-1:exon

SJPD1_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00115
old locus tag: SJPD1_0022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLINTVKPENATGELAELYGKITAMRGRVSNSAQIFSASPELIKQQMSFIEYYMVKQKSLSMPLLASIRMLISDKNSCSYCVDMNASILINMLGWTPKEVEAMRADPKSAKLEEKEKAMLLFVLKAVRTPHDVEAKDVQILRDLGYTDGEILDATNHGARMTAVDIIFDAFKIEKDF
SIO_010081: SJPD1_RS00115
subclass of: SO_0000673
so part of: SJPD1_RS00115
location: complement(21999..22535)
location: region:21999-22535:-1
so has part: feature:21999-22535:-1:exon

WP_096045422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21999-22535:-1:exon

SJPD1_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00120
old locus tag: SJPD1_0023
so part of: sequence
location: complement(22526..23095)
location: region:22526-23095:-1
so has part: feature:22526-23095:-1:exon
subclass of: SO_0000010

position:22526:-1
position: 22526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23095:-1
position: 23095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22526-23095:-1:exon

SJPD1_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00120
old locus tag: SJPD1_0023
EC number: 3.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768245.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine hydrolase family protein
translation: MKRALIVVDVQNEYFDGGALPISYPPHSFERIKTAISEAQKAEILIVFVQHTSLQKDAGAFVRGSYLWEFHDELKKLKPGLYIEKNHASSFAGTDLNYRLRTLGVDTVAIIGYMTQNCCDATARDASQLGFNVEFLSDANGTLAFSNEAGEVSAQELHQAFLVAQAFGFSRVLTLNEWIPLLKKETSCH
SIO_010081: SJPD1_RS00120
subclass of: SO_0000673
so part of: SJPD1_RS00120
location: complement(22526..23095)
location: region:22526-23095:-1
so has part: feature:22526-23095:-1:exon

WP_096045423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22526-23095:-1:exon

SJPD1_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00125
old locus tag: SJPD1_0024
so part of: sequence
location: 23203..23769
location: region:23203-23769:1
so has part: feature:23203-23769:1:exon
subclass of: SO_0000010

position:23203:1
position: 23203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23769:1
position: 23769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23203-23769:1:exon

SJPD1_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00125
old locus tag: SJPD1_0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768246.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: METTRDKLINATFDEVFSHGYQGASLCDILAKAGVHKGSMYHFFANKKEMALAAIEEVILKKNLEKYSYVETYTSGFLEEFYTRLRDTSVRDFQRGCPIANVVQEMSNIDEDFNTLMKSIYGAFRTNVKAIFDKAVTVGEMKPCDTTKLALFTTSTIEGAILSAKATQNVQDYVDVIEELIEHIEGKR
SIO_010081: SJPD1_RS00125
subclass of: SO_0000673
so part of: SJPD1_RS00125
location: 23203..23769
location: region:23203-23769:1
so has part: feature:23203-23769:1:exon

WP_096045424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23203-23769:1:exon

SJPD1_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00130
old locus tag: SJPD1_0025
so part of: sequence
location: 23766..24200
location: region:23766-24200:1
so has part: feature:23766-24200:1:exon
subclass of: SO_0000010

position:23766:1
position: 23766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24200:1
position: 24200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23766-24200:1:exon

SJPD1_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00130
old locus tag: SJPD1_0025
inference: COORDINATES: protein motif:HMM:NF024812.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MKIVRITKNDLPKLSTLFTEFIGTKSNLGKMSSSLDSIMANPNYSVLGAKIEDDLIGSAMGIICFDLVGECQSFMVIENVVVATHARSKGVGRALMSALEAEALKANCRYIMLVSSISRVDAHEFYKSLGYETDGFKGFKKYMV
SIO_010081: SJPD1_RS00130
subclass of: SO_0000673
so part of: SJPD1_RS00130
location: 23766..24200
location: region:23766-24200:1
so has part: feature:23766-24200:1:exon

WP_096045425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23766-24200:1:exon

SJPD1_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00135
old locus tag: SJPD1_0026
so part of: sequence
location: 24268..24690
location: region:24268-24690:1
so has part: feature:24268-24690:1:exon
subclass of: SO_0000010

position:24268:1
position: 24268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24690:1
position: 24690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24268-24690:1:exon

SJPD1_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00135
old locus tag: SJPD1_0026
inference: COORDINATES: protein motif:HMM:NF024559.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3995 domain-containing protein
translation: MNIITIVAIVSLIGIGVLHFYWALGGKVWLNKSIPTINGKPLLHPGKIATIVVGIVLIGFAWIASALSFGDLYSTLYGKYIVYFGWIVSGIFIVRAIGDFNTVGFFKKIKTSDFALYDTKFYSPYALFIGIVFALLSYQV
SIO_010081: SJPD1_RS00135
subclass of: SO_0000673
so part of: SJPD1_RS00135
location: 24268..24690
location: region:24268-24690:1
so has part: feature:24268-24690:1:exon

WP_096045426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24268-24690:1:exon

SJPD1_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00140
old locus tag: SJPD1_0027
so part of: sequence
location: 24792..25637
location: region:24792-25637:1
so has part: feature:24792-25637:1:exon
subclass of: SO_0000010

position:24792:1
position: 24792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25637:1
position: 25637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24792-25637:1:exon

SJPD1_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00140
old locus tag: SJPD1_0027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013136510.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MKASTREDYVRLVYKVVFYIEQNADKELSLEELAKVAGFSKYHFHRIFKAVTGENIGDFIARVRLVYSAWKLKTEPKITDVALSCGFETNASFSKAFKNRFGVSPRTYATQLKAKKGVVMLKPTMVEFKPLSVFYVRKTGAYETSSCEAWNVLMAFAYEQRMKFHKNIMGKATMHFGIGHDNPSLVEQNLLRYDACITCEDESIEVKGEVFKKVLDGGKCAVFLHKGPYENLTATYAQIMDWVVSEGVGLRDAPVFEKYLNRDPRRTKPENLRTEIYVPIV
SIO_010081: SJPD1_RS00140
subclass of: SO_0000673
so part of: SJPD1_RS00140
location: 24792..25637
location: region:24792-25637:1
so has part: feature:24792-25637:1:exon

WP_096045427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24792-25637:1:exon

SJPD1_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00145
old locus tag: SJPD1_0028
so part of: sequence
location: complement(25676..26290)
location: region:25676-26290:-1
so has part: feature:25676-26290:-1:exon
subclass of: SO_0000010

position:25676:-1
position: 25676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26290:-1
position: 26290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25676-26290:-1:exon

SJPD1_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00145
old locus tag: SJPD1_0028
EC number: 2.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768264.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MQPSKDYFHEKSKTYEKEVTRTNNVKNIGEAILERLTYDKATTHMMDFGSGTGLLTEQIAPFVRKMTTIDISPSMNEALRAKKEQLPCELEMLEIDLVSTEVDATFDGIISSMTIHHVEDVQALFHTFYRLLNHGGTIALADLDKEDGTFHTEDMGVFHFGFDQEEFATWAQKAGFDDVNIEIVSVAKKPYGDYPIFLLTGRKH
SIO_010081: SJPD1_RS00145
subclass of: SO_0000673
so part of: SJPD1_RS00145
location: complement(25676..26290)
location: region:25676-26290:-1
so has part: feature:25676-26290:-1:exon

WP_096045428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25676-26290:-1:exon

SJPD1_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: amrB
locus tag: SJPD1_RS00150
old locus tag: SJPD1_0029
so part of: sequence
location: complement(26372..27166)
location: region:26372-27166:-1
so has part: feature:26372-27166:-1:exon
subclass of: SO_0000010

position:26372:-1
position: 26372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27166:-1
position: 27166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26372-27166:-1:exon

SJPD1_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: amrB
locus tag: SJPD1_RS00150
old locus tag: SJPD1_0029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768265.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AmmeMemoRadiSam system protein B
translation: MNKHRKAAVAGMFYPDVCSEIKHMFDHFDKAMPNIALDVIPRALIVPHAGYIYSGYTANLAYHYTASKCSDVERVVVIGPSHRIYVAGASIALLEAYHTPCGEIEIDLAFSYALKRKFAFLDFHPMAHEEHSTEVQMPFIRQYFKHAKVVEIVYGDISHSELSTLIDEVLSDEKTLVVISTDLSHFYTEEEANKLDHTCIEAISHLDLHALSHGCEACGITGVKAMVQSALSHNFQAHFLDYRTSYAHSKDASRVVGYTSFVIG
SIO_010081: SJPD1_RS00150
subclass of: SO_0000673
so part of: SJPD1_RS00150
location: complement(26372..27166)
location: region:26372-27166:-1
so has part: feature:26372-27166:-1:exon

WP_096045429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26372-27166:-1:exon

SJPD1_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: amrS
locus tag: SJPD1_RS00155
old locus tag: SJPD1_0030
so part of: sequence
location: complement(27159..28148)
location: region:27159-28148:-1
so has part: feature:27159-28148:-1:exon
subclass of: SO_0000010

position:27159:-1
position: 27159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28148:-1
position: 28148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27159-28148:-1:exon

SJPD1_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: amrS
locus tag: SJPD1_RS00155
old locus tag: SJPD1_0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768266.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AmmeMemoRadiSam system radical SAM enzyme
translation: MHYFKTEGSRLVCLLCAHYCHLKEGQIGICGVNQHVDGTIKNLVYGHPVAMHIDPVEKKPLYHFLPDTRAFSIGTIGCNFKCPFCQNWSISQEKSLHVKEYFAPQQIIEMALKYECASIAYTYNEPTIFYPYAKDIAILAHEKGMKNIFVTNGFESSEVIDDMVGIIDAANIDLKSFNHDYYKKELGGGLETILENLKHFKRNGIWIEVTTLIVPTKNDSDEELNSIASFIAKELGVETPWHISAFHPDYHEQGLPSTSVETLKRAEAIGRKAGLKHIYIGNVGLENPTRCVTCNAVLITRKRFEVMENYLVDGCCPKCNTKLTGVFDE
SIO_010081: SJPD1_RS00155
subclass of: SO_0000673
so part of: SJPD1_RS00155
location: complement(27159..28148)
location: region:27159-28148:-1
so has part: feature:27159-28148:-1:exon

WP_096045430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27159-28148:-1:exon

SJPD1_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: amrA
locus tag: SJPD1_RS00160
old locus tag: SJPD1_0031
so part of: sequence
location: complement(28148..28690)
location: region:28148-28690:-1
so has part: feature:28148-28690:-1:exon
subclass of: SO_0000010

position:28690:-1
position: 28690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28148-28690:-1:exon

SJPD1_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: amrA
locus tag: SJPD1_RS00160
old locus tag: SJPD1_0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768267.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AmmeMemoRadiSam system protein A
translation: MQNVLLEIAKQAISDSFNHTSTLNPKALVQAHPEFSTPKATFVTLTLDGQLRGCIGSLIAHRPLLDDLIHNAKAAAFDDPRFYPLSPEEFLHVKIEISLLSEPQPILYENTNDLKSKVTVGMDGIILQKGSRKATFLPQVWEQLPTFELFFSHLCQKAGLAPDCLESHPEIWYYRVEKVK
SIO_010081: SJPD1_RS00160
subclass of: SO_0000673
so part of: SJPD1_RS00160
location: complement(28148..28690)
location: region:28148-28690:-1
so has part: feature:28148-28690:-1:exon

WP_096045431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28148-28690:-1:exon

SJPD1_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00165
old locus tag: SJPD1_0032
so part of: sequence
location: 28758..29258
location: region:28758-29258:1
so has part: feature:28758-29258:1:exon
subclass of: SO_0000010

position:28758:1
position: 28758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29258:1
position: 29258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28758-29258:1:exon

SJPD1_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00165
old locus tag: SJPD1_0032
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLAILAHTPVWVFLLFGVLLILGWMQSRDRKVSYVRAFILPCMMIIFSIYGVASAFGMSLGIVAWSVGMMVMMALGIRIRAFYNVVFMAEYNAFAIKGSWLWLTLMMVIFWLKFAVGVALARELAIVTEPWFILSVSLCFGLLSGIFLVRMVILWKIKSLHVKTI
SIO_010081: SJPD1_RS00165
subclass of: SO_0000673
so part of: SJPD1_RS00165
location: 28758..29258
location: region:28758-29258:1
so has part: feature:28758-29258:1:exon

WP_096045432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28758-29258:1:exon

SJPD1_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00170
old locus tag: SJPD1_0033
so part of: sequence
location: 29303..29704
location: region:29303-29704:1
so has part: feature:29303-29704:1:exon
subclass of: SO_0000010

position:29303:1
position: 29303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29704:1
position: 29704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29303-29704:1:exon

SJPD1_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00170
old locus tag: SJPD1_0033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQWVAMLICLGFFSGCSTIGLNFNFWSQKAPETPAPVTSEVKITLPTQVLLYDLDITDRPYAGLGEVSVTLSKLNPWGEEPTQEQVEAKLKEEAAKKGADALIYVRYTKLGASWNRVSGIEGKAQAVKFTRY
SIO_010081: SJPD1_RS00170
subclass of: SO_0000673
so part of: SJPD1_RS00170
location: 29303..29704
location: region:29303-29704:1
so has part: feature:29303-29704:1:exon

WP_096045433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29303-29704:1:exon

SJPD1_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00175
old locus tag: SJPD1_0034
so part of: sequence
location: 29740..30126
location: region:29740-30126:1
so has part: feature:29740-30126:1:exon
subclass of: SO_0000010

position:29740:1
position: 29740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30126:1
position: 30126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29740-30126:1:exon

SJPD1_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00175
old locus tag: SJPD1_0034
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFRFVVGSMVVSFLLSGCATWSQTQVTNPNTAIKEIKQVSPDQVQLTEGDMTNRPYVSLGDLAVTVNKTTIFHPEPTKEMIDAKLKEEAAKLGADAVIYVRYGTVGISALSWGSLDGKGRAIQFTSN
SIO_010081: SJPD1_RS00175
subclass of: SO_0000673
so part of: SJPD1_RS00175
location: 29740..30126
location: region:29740-30126:1
so has part: feature:29740-30126:1:exon

WP_096045434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29740-30126:1:exon

SJPD1_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00180
old locus tag: SJPD1_0035
so part of: sequence
location: 30089..30505
location: region:30089-30505:1
so has part: feature:30089-30505:1:exon
subclass of: SO_0000010

position:30089:1
position: 30089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30505:1
position: 30505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30089-30505:1:exon

SJPD1_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00180
old locus tag: SJPD1_0035
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKVEQFNLQVISLVCIGLLCVGCAHSARDLPPDMSHLPPSMRLLPSDMESAEYQLDCKDLTLALTHTREHLKELEKDVMSMQADNQSKGLTGITVFSPAMFLISDNPASSKDYQESDQARERLLRIAQARQCELPSY
SIO_010081: SJPD1_RS00180
subclass of: SO_0000673
so part of: SJPD1_RS00180
location: 30089..30505
location: region:30089-30505:1
so has part: feature:30089-30505:1:exon

WP_138070091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30089-30505:1:exon

SJPD1_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00185
old locus tag: SJPD1_0036
so part of: sequence
location: 30545..31363
location: region:30545-31363:1
so has part: feature:30545-31363:1:exon
subclass of: SO_0000010

position:30545:1
position: 30545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31363:1
position: 31363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30545-31363:1:exon

SJPD1_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00185
old locus tag: SJPD1_0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768269.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MRYTFAMKPSLLNDTAFENIAHSTNTFSSHFHDTYAIGITHEGMFKSHHERQIISAYERTTRIINPGEIHGGDSYAWKYTNFYPSVELLSTLYEQMYGEKKIPIFEQHIIEDAELYTKLAAFFHTIYANEEPMHSESKLIDALSYLIAHYAQKATSYLFTCKDPKAMSVVIDYIHDNLGSDITLDALASTAHVSKYHFLRLFKNHTGLTPHQYIIAGRVCKAKTLVIKGESLSQVALQAGFSDQSHFIRSFRKIYGYSPKTLLQKSNFILYK
SIO_010081: SJPD1_RS00185
subclass of: SO_0000673
so part of: SJPD1_RS00185
location: 30545..31363
location: region:30545-31363:1
so has part: feature:30545-31363:1:exon

WP_226372213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30545-31363:1:exon

SJPD1_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00190
old locus tag: SJPD1_0037
so part of: sequence
location: 31400..32296
location: region:31400-32296:1
so has part: feature:31400-32296:1:exon
subclass of: SO_0000010

position:31400:1
position: 31400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32296:1
position: 32296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31400-32296:1:exon

SJPD1_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00190
old locus tag: SJPD1_0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768270.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MGNKNIFFFLLFLAMVAWGGSWVNVKVLGHYVSAFEMIFLRFGITAITMVPIIVWLKHSFKIDLKSFGLVVLAALALIFYNKYYYLGTKFGTASLGGAMVTTMIPILTFIFLALLGTKKVSSKDLFALGLGAVGVLTMLHIWTFDLAHILVIHNLYFLLAAILWAVLTIVSSKSTKISPIVFTFYMYIVTVVLDWVLFVDVSTIPFGSFDGIFWLNTLLISLAASTFANTIFFLGIEKLGAAEVSSFVFLVPFSAIILSAVFLGEKVDLFIIIGTVLTLYAVKLLNNITILKRRRKSV
SIO_010081: SJPD1_RS00190
subclass of: SO_0000673
so part of: SJPD1_RS00190
location: 31400..32296
location: region:31400-32296:1
so has part: feature:31400-32296:1:exon

WP_096045436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31400-32296:1:exon

SJPD1_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00195
old locus tag: SJPD1_0038
so part of: sequence
location: complement(32262..32828)
location: region:32262-32828:-1
so has part: feature:32262-32828:-1:exon
subclass of: SO_0000010

position:32262:-1
position: 32262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32828:-1
position: 32828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32262-32828:-1:exon

SJPD1_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00195
old locus tag: SJPD1_0038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855841.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqiA/YcfP family alpha/beta fold hydrolase
translation: MIIYIHGFGSSGEASKAKLLRAYCQKEGIRFIAPSLPTIPDLAIKTLSELIESYQEPVYLMGSSLGGYYALYLSDKYNLKAVLINPAVNAPETLERAIGQGVNYYDNSTYEWNESHLEMLESYEIEEPNLENLLVLLQKSDEVLDYEEACDFLEGAKMVVEEGGNHSFEGLDRHLESIKRFFGVALKL
SIO_010081: SJPD1_RS00195
subclass of: SO_0000673
so part of: SJPD1_RS00195
location: complement(32262..32828)
location: region:32262-32828:-1
so has part: feature:32262-32828:-1:exon

WP_096045437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32262-32828:-1:exon

SJPD1_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00200
old locus tag: SJPD1_0039
so part of: sequence
location: 33024..33308
location: region:33024-33308:1
so has part: feature:33024-33308:1:exon
subclass of: SO_0000010

position:33024:1
position: 33024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33308:1
position: 33308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33024-33308:1:exon

SJPD1_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00200
old locus tag: SJPD1_0039
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLQELEARKIIVMVMGETRTLTKSDEELALLLKKRLTKKECEVLNAEVLGKDKETLMSEQKIDTVRYDALKASAIKKIKNESVHGDFFYTKGE
SIO_010081: SJPD1_RS00200
subclass of: SO_0000673
so part of: SJPD1_RS00200
location: 33024..33308
location: region:33024-33308:1
so has part: feature:33024-33308:1:exon

WP_096045438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33024-33308:1:exon

SJPD1_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00205
old locus tag: SJPD1_0040
so part of: sequence
location: 33312..35375
location: region:33312-35375:1
so has part: feature:33312-35375:1:exon
subclass of: SO_0000010

position:33312:1
position: 33312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35375:1
position: 35375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33312-35375:1:exon

SJPD1_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00205
old locus tag: SJPD1_0040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011373516.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MEQMEVIDSVCTYCGVGCDIAANVKDNTIQSIFAHPDGVVSEGKLCIKGKYGFEFVNAPDRLRIPRIRKSFLAKNPAIYEAIALHVKELDEEWVETTLDAATTAAAMKLHEIQKKYGQKSVCSIGGARTSCESSYLLQKFTRHTLNSPHVDNCARICHSPSLKGMRTTIGEGAATNPYNDIYQTEFMIVIGSNTTEAHPIISNRIVDMATKHDNLAVFDVREITLHRFAKYKGIIPHEANLLVLNMMAYVIISEELYDEDFLKDRTLGFDAFKEKILSDPFANPKYFENIEGYEHLSKLIPKVAREYALKKSMIFWGLGITEHIDGSYAVTAITHLALMTGNIGKVGAGLMPLRGQNNVQGACDMGMLPYYDPDYQEPKEIGLMTPQLVEAMFEGRIKAVINMGEDLTHVHPNSNKINAALDTLDFIFVQELFMTEIAKRADIVVGVKSAYEKTGVYVNAMRRLHLSQPLVKSDLPDDWEVIQMIDNKLGGSYRYEDSKQIWDEVREVAYRRFSGASYNRLERHRVRGLQWPVHTEDTPVLHQLDFRTEDGYGRFHYHQYELRGMVQELSEKRLLGYHLTTGRTLAQYNNASQTSRCEKLNKRYDETILWVNENDAADFSSEKVILKTPYGQSAPLTVKLTDKVQPKTLFCTFHHASSRINNLFGDRCDELILTAAFKSIKVEVVNV
SIO_010081: SJPD1_RS00205
subclass of: SO_0000673
so part of: SJPD1_RS00205
location: 33312..35375
location: region:33312-35375:1
so has part: feature:33312-35375:1:exon

WP_096045439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33312-35375:1:exon

SJPD1_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00210
old locus tag: SJPD1_0041
so part of: sequence
location: 35442..35882
location: region:35442-35882:1
so has part: feature:35442-35882:1:exon
subclass of: SO_0000010

position:35442:1
position: 35442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35882:1
position: 35882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35442-35882:1:exon

SJPD1_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00210
old locus tag: SJPD1_0041
inference: COORDINATES: protein motif:HMM:NF025734.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme-binding domain-containing protein
translation: MKKILFGVVGILMVIQFMRPNFNNPKVDEKIALQADEKVMVVLKNACFDCHSNEVQYPWYHNVAPVSWVMAAHIDNGRRALNFSTWADTNADTRITRIKRAKQLISNGLMPKGSYELMHPKAHLDAKDKKILEEFFDQQLEQLKKS
SIO_010081: SJPD1_RS00210
subclass of: SO_0000673
so part of: SJPD1_RS00210
location: 35442..35882
location: region:35442-35882:1
so has part: feature:35442-35882:1:exon

WP_096045440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35442-35882:1:exon

SJPD1_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00215
old locus tag: SJPD1_0042
so part of: sequence
location: 36199..37296
location: region:36199-37296:1
so has part: feature:36199-37296:1:exon
subclass of: SO_0000010

position:36199:1
position: 36199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37296:1
position: 37296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36199-37296:1:exon

SJPD1_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00215
old locus tag: SJPD1_0042
inference: COORDINATES: protein motif:HMM:NF012798.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MSRIKTKYQGVFYREAVTNGKPDKTYYIVFKDTHNKTVETKIGKESEGVRANYCNQKRNEIITKQRLGEDLPAIAIKKKKHIITLDIAAEKFFKEREMQNKDNAHTQSKYNNWIAPVLGKMEIDLIGLEEVRGLQESLVKKEYAAATINFTINLLHAIVNYAIENKLSTAVHNPTKKLKQLKVDNARDRYLTKEECQRLLEAVEDEPLLRLFVRLSLSTGGRLETILSICKKDIDFTNKIIALKDHKNASSYRGFINDDLTSYVNEYCKDLKPNDKLITMPVRTLRRQLSNIFADLFNADLDKNDRKNRVVIHTLRHTFASLLAIQGTPIFTIQKLMNHQDIKTTLRYAKLSPESGKEFVLKLLA
SIO_010081: SJPD1_RS00215
subclass of: SO_0000673
so part of: SJPD1_RS00215
location: 36199..37296
location: region:36199-37296:1
so has part: feature:36199-37296:1:exon

WP_096045441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36199-37296:1:exon

SJPD1_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00220
old locus tag: SJPD1_0043
so part of: sequence
location: 37523..38980
location: region:37523-38980:1
so has part: feature:37523-38980:1:exon
subclass of: SO_0000010

position:37523:1
position: 37523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38980:1
position: 38980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37523-38980:1:exon

SJPD1_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00220
old locus tag: SJPD1_0043
inference: COORDINATES: protein motif:HMM:NF024977.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MAEQGYSLESALADLIDNSISADAQRIEILIKTDREPFTLFLADDGNGMDEETLKACMHFPSNSPDEIRQKSDLGRFGLGMKTASFSQTRKFTVISRLKGTEKFSGRTWDLNELKNNKWRIVVNSEKEIENILYDYKIQSNEHYNAFEDYIPNVIVVWYGLYKFEEYLEEENRRKALNREITEVATDHLSLVFHRFMERKSKKLQIRVNNALLKPFNPFPIDENDFRAVEFKQKKFGSDAIKLEGFVLPSRSIEETKESNQSLWTTKHRSLQDMEGIYIYRANRIILFGGWNGLIKKASRLQLARLRVEIGNSVDHLLHLNVAKSQVIVPHELKDAFENYINDLTQEAIKEFYNRTTKTYPKQTEKSASPFIRRPSNKGILLEINDEFPICQMLNDELTISGKAHLKAFVKIINTQINQIRQTHEDKVFLSLENENNFSEEDLFETIKNLKAHGIKSSIIKKDILPTLGYQINSYPDHILKALDD
SIO_010081: SJPD1_RS00220
subclass of: SO_0000673
so part of: SJPD1_RS00220
location: 37523..38980
location: region:37523-38980:1
so has part: feature:37523-38980:1:exon

WP_226372271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37523-38980:1:exon

SJPD1_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00225
old locus tag: SJPD1_0044
so part of: sequence
location: 38973..42041
location: region:38973-42041:1
so has part: feature:38973-42041:1:exon
subclass of: SO_0000010

position:38973:1
position: 38973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42041:1
position: 42041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38973-42041:1:exon

SJPD1_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00225
old locus tag: SJPD1_0044
inference: COORDINATES: protein motif:HMM:NF022063.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Z1 domain-containing protein
translation: MTNRTYIDLLNTFIDIEVDKKLKENKVLTFQFFSSEELKAQVRQSTPFFNDEKFDDLYAIAIKEAKHRNKQGMTPSISISTQETRNKKWLTDERIKSLGWNNDEIITYRARYLKYLKNLERSELYIQETARSSQEIIKKLGDPHSENPYFTRGLVVGSVQSGKTANFNAVINSALDVGYDLIIVLSGIMEDLREQTQKRIEKEVVGTNIGGEWNGVGKVSSFGTRGSHPEVNQVCIPTSAKTDFKKNMKEADFDLNHKNILVCKKNTGVLKNLLLWLDKYLNENKDKIDIPFLIIDDEADNASLNNLGHKGIEYASIINGQIRALLALFNKKTYLGYTATPFANVLQDRNEKPKEKLEIKENGEIKSFEQEGSLFPKDFIELLFPPDNYIGAKHFFETRLNKIKKIDPLIPSAINDYLDYFPDRITINDMQPTKKIGKGTRATKRDDGFPKRDQLPDSLKDAIKCFVISTAIRTSREKEMFQSKLFQPHNTMLIHISRFTPWQTRTKENVDKYVNELTSALENDSPSDKKGIYVDFEKIWNKYYAYIMENIRTYLPDDYEDDFLTPRTFHDIKPLLYKAISDIEVKAINSETKDKLDYPEDKPKKYIAIGGNRLSRGFTLEGLTINYFIRNTNFADTLLQMGRWFGYRPGYIDCCKVFVTQDGIEKFDQTTATIEDLEDKFIEMNRDPNNTPANFALRVLSHPGVIQITRGDILKNAKEIKWSYSDHLKQFTKFHIDNKKINEAWEAFVSHISSPDIHFEIKYNEENKPEFLEYQPETIDKLFDFLNLPNSFYERNNDLSGIKEYIKLCSKENKLNKWSIVIKVTGHGGVLKSNVSGLPIEIRKAERKSSTSKKWHDMLKNEHIFAAGGGSSNILGGGQDMQIRLNDAQIKQANKEFKDQLRKELKEKYPNISDITLEEKVKQTSVPEKAFRRMMSDEEGILLIYLMDLESIFSDEHGPIVELDELKKSIDTNIPLIGYAIGIPKIDSNIGGTYLESLFHKDINEEYNEDEEYNEIKEELEG
SIO_010081: SJPD1_RS00225
subclass of: SO_0000673
so part of: SJPD1_RS00225
location: 38973..42041
location: region:38973-42041:1
so has part: feature:38973-42041:1:exon

WP_096045443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38973-42041:1:exon

SJPD1_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00230
old locus tag: SJPD1_0045
so part of: sequence
location: 42038..43018
location: region:42038-43018:1
so has part: feature:42038-43018:1:exon
subclass of: SO_0000010

position:42038:1
position: 42038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43018:1
position: 43018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42038-43018:1:exon

SJPD1_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00230
old locus tag: SJPD1_0045
inference: COORDINATES: protein motif:HMM:NF025748.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK motif protein
translation: MIQSSELQNRWKKIQYSGKSEFEFIRIDSGISIPEMSIGLNSSLNKCLLLELPKNYNVDFQKSIKQNLTLYFFKDTNFIVLELTDKAFEDLFDDLIISIYQHIYQLSDVDKYSKIFIAMFYKWSEFFDDKKVEKHSLDIIKGLYGELFILSLLIKECDSSHLNDILMSWKGPYDCGHDFVLENKNIEVKTKETIKNSIKISSEYQLEDELQKGLELHVISVETNSENAISLRRLLELVKDMVINKMGDFSIILTVLLQKNITSQNIHIYDNFQFEVMELAIYDCLDESFPKLTKSNTPKAIGSIQYTLYLDYLNDFLVSKRTFLNE
SIO_010081: SJPD1_RS00230
subclass of: SO_0000673
so part of: SJPD1_RS00230
location: 42038..43018
location: region:42038-43018:1
so has part: feature:42038-43018:1:exon

WP_096045444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42038-43018:1:exon

SJPD1_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00235
old locus tag: SJPD1_0046
so part of: sequence
location: 43011..44906
location: region:43011-44906:1
so has part: feature:43011-44906:1:exon
subclass of: SO_0000010

position:43011:1
position: 43011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44906:1
position: 44906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43011-44906:1:exon

SJPD1_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00235
old locus tag: SJPD1_0046
inference: COORDINATES: protein motif:HMM:NF022062.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AIPR family protein
translation: MSDIEERLNFRLDLLEDSKDQDGFIVQSNLLSQVLPSMLDAKLIDSEDFNDSYFHDQSNGQKLNAYTISNSGERLQLFIIDESTIDETSNPDKLLILQKADYDHQFKRVEKLIKKAFNSQLFNSIQDSDRAKVLASKLESIEGFDDFDVIEIFLISLTVAVSNQGKTIQPRSIYFQEEKCIRTFKSKEETKKKEVLILKKLIDLNFLFNVMVSKGYREVLTIDFEKTFNYGLEAIKAAENESFVSYLCVLKADIIADLYRQYSSRLLEKNVRSFLDFRGVNKGIKETIRREPEKFIAYNNGLTITATAVKTYEKKHKLYIESLTDFQIVNGGQTTATIYFSKKENLDVSKVYVMAKINVAKQTNDKDLEKLIDNISKYSNAQSKVSNVDLRSRNSQLIKIKMFSESVLTPAGRKWFFERSKGEFNTLLRKERSNKNKILKDFPSERRFTKEQLGKYYCAWGEEPYLVKKGGERIFRNFIEHLSPDEDNGRMPPTIDRDYYEALIAKVILFKEMELIYGTRNNAIGQIRSAVIPYSLSILYLYTDIQKNYFNFQKIWKDEGVDENLSVFLWNLMKLMNDLIKKYSLSDDLGEYSKRIELWDSIKRCQEIDFFMSEDKNKILMSKYIIQAKVK
SIO_010081: SJPD1_RS00235
subclass of: SO_0000673
so part of: SJPD1_RS00235
location: 43011..44906
location: region:43011-44906:1
so has part: feature:43011-44906:1:exon

WP_096045445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43011-44906:1:exon

SJPD1_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00240
old locus tag: SJPD1_0047
so part of: sequence
location: 44918..45409
location: region:44918-45409:1
so has part: feature:44918-45409:1:exon
subclass of: SO_0000010

position:44918:1
position: 44918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45409:1
position: 45409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44918-45409:1:exon

SJPD1_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00240
old locus tag: SJPD1_0047
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLETLTHSEIIELYSKCIQELKKRNIIRTKNITGEIGEYIALDFYNNNPKLPNLQFAPPSTENIDAISRKGERYSIKTVTNHGSTGVFYGLPSQGSLEIPMQKFEHVIIVKLNDNFELECILELTWNDFLENKKWHSRMQAWNLTYSKKLKEKAKCIYEKVL
SIO_010081: SJPD1_RS00240
subclass of: SO_0000673
so part of: SJPD1_RS00240
location: 44918..45409
location: region:44918-45409:1
so has part: feature:44918-45409:1:exon

WP_096047756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44918-45409:1:exon

SJPD1_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00245
old locus tag: SJPD1_0048
so part of: sequence
location: complement(45431..46696)
location: region:45431-46696:-1
so has part: feature:45431-46696:-1:exon
subclass of: SO_0000010

position:45431:-1
position: 45431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46696:-1
position: 46696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45431-46696:-1:exon

SJPD1_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00245
old locus tag: SJPD1_0048
EC number: 2.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002825532.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA cytosine methyltransferase
translation: MVVLDLFSGAGGLSEGFSRANATFVGHVELDPYACKTLKTRTAYWNLKQQGKLNIYYDYLLKKISTETLWEKANVLHSDDVINKEISESTFPEITSRIKANLKNKNLQHVDVIIGGPPCQAYSIIGRARMKESVNADPRNFLYKYYVKFLTTFKPKMFIFENVPGLKSAGNGQYFKDLKAAIDKAGYHIEEPKELIASDFGVLQNRRRIIIVGWKKKKNMQYQYPDFEKIDTNKYLVNDLLKDLPLLEPGTKIEGKNKYIQNTNPYLIQANIREKNFNILTQHETRPHNERDREIYKEAILDWNLYKKRLCYKELASKRPELITHKNTESFRNRFNVIKADERASHTILAHMAMDGHYYIHPDIQQLRSLSIREAARLQSFPDDFYFEGPRTAAFRQIGNAVPPKMGEQIAKTIKKLIDNL
SIO_010081: SJPD1_RS00245
subclass of: SO_0000673
so part of: SJPD1_RS00245
location: complement(45431..46696)
location: region:45431-46696:-1
so has part: feature:45431-46696:-1:exon

WP_096045446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45431-46696:-1:exon

SJPD1_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00250
old locus tag: SJPD1_0049
so part of: sequence
location: 46793..47032
location: region:46793-47032:1
so has part: feature:46793-47032:1:exon
subclass of: SO_0000010

position:46793:1
position: 46793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47032:1
position: 47032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46793-47032:1:exon

SJPD1_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00250
old locus tag: SJPD1_0049
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDCPICAWPLKAGKKMVYCYDDSCGFHINYAQKDLLRDITKKEVEDLLMGKMIEGLIHLDIDAPNFIASKVTSLESYM
SIO_010081: SJPD1_RS00250
subclass of: SO_0000673
so part of: SJPD1_RS00250
location: 46793..47032
location: region:46793-47032:1
so has part: feature:46793-47032:1:exon

WP_096045447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46793-47032:1:exon

SJPD1_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00255
old locus tag: SJPD1_0050
so part of: sequence
location: 47016..47861
location: region:47016-47861:1
so has part: feature:47016-47861:1:exon
subclass of: SO_0000010

position:47016:1
position: 47016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47861:1
position: 47861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47016-47861:1:exon

SJPD1_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00255
old locus tag: SJPD1_0050
inference: COORDINATES: protein motif:HMM:NF014691.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MNPTCKDDCIKLLNKYQDKLTPDQYRNIEATIGNHALEGMFADKYDIDRLVRMAKNDLSYEEARIEAITEIKSIRARIQDKNIDLPLFDQELLGSNKVEAINLEDLFLKEQKLTLIAELSIRHMPVTGIFDFNHLQAIHKRLFDDVYTFAGKDRFEMGYPGVFVKGETRFTPGIKLPEVSKALFDALQDDKFFVNLDHKEFAQEMAIFFNGLNLLHPFREGNGRTQRLFMEGVAQNAGYVLSLHQVSQEAMIRACQNAAKGFINSLEILIRHHLEPIENKR
SIO_010081: SJPD1_RS00255
subclass of: SO_0000673
so part of: SJPD1_RS00255
location: 47016..47861
location: region:47016-47861:1
so has part: feature:47016-47861:1:exon

WP_168171300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47016-47861:1:exon

SJPD1_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00260
old locus tag: SJPD1_0051
so part of: sequence
location: 48112..48390
location: region:48112-48390:1
so has part: feature:48112-48390:1:exon
subclass of: SO_0000010

position:48112:1
position: 48112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48390:1
position: 48390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48112-48390:1:exon

SJPD1_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00260
old locus tag: SJPD1_0051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004085174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MIKSFKHKGLQLFFESGNLKGIQADHAKKLRMRLAALDTAMIIEDLKLLGFDLHELEGNRKGIWSIKVNGNYRLTFTFENGDVYILNYEDYH
SIO_010081: SJPD1_RS00260
subclass of: SO_0000673
so part of: SJPD1_RS00260
location: 48112..48390
location: region:48112-48390:1
so has part: feature:48112-48390:1:exon

WP_096045449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48112-48390:1:exon

SJPD1_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00265
old locus tag: SJPD1_0052
so part of: sequence
location: 48390..48680
location: region:48390-48680:1
so has part: feature:48390-48680:1:exon
subclass of: SO_0000010

position:48680:1
position: 48680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48390-48680:1:exon

SJPD1_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00265
old locus tag: SJPD1_0052
inference: COORDINATES: protein motif:HMM:TIGR02607.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HigA family addiction module antitoxin
translation: MSMYNPPHPGQFIKEVYLDELGISEREVAHKLKVAPSTFHRLVSTQTSLTPEMALRLSKTLGRTPESWLAMQDKYSLWMLGQSLNLDAVEKLVISA
SIO_010081: SJPD1_RS00265
subclass of: SO_0000673
so part of: SJPD1_RS00265
location: 48390..48680
location: region:48390-48680:1
so has part: feature:48390-48680:1:exon

WP_096045450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48390-48680:1:exon

SJPD1_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00270
old locus tag: SJPD1_0053
so part of: sequence
location: 48693..48935
location: region:48693-48935:1
so has part: feature:48693-48935:1:exon
subclass of: SO_0000010

position:48693:1
position: 48693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48935:1
position: 48935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48693-48935:1:exon

SJPD1_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00270
old locus tag: SJPD1_0053
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEENIIKGEVTDITYFGLKVYDEKFVRDEDIKQLPFYDFWAESAQNSTCFMHDDQRLIYLHDWERFCKLFIKTGKHRFQF
SIO_010081: SJPD1_RS00270
subclass of: SO_0000673
so part of: SJPD1_RS00270
location: 48693..48935
location: region:48693-48935:1
so has part: feature:48693-48935:1:exon

WP_096045451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48693-48935:1:exon

SJPD1_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00280
old locus tag: SJPD1_0055
so part of: sequence
location: complement(49202..49486)
location: region:49202-49486:-1
so has part: feature:49202-49486:-1:exon
subclass of: SO_0000010

position:49202:-1
position: 49202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49486:-1
position: 49486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49202-49486:-1:exon

SJPD1_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00280
old locus tag: SJPD1_0055
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDTFSSVVDITPPIKSKISGGEFVIAYGNYTLKEKTYPCFGLRWTIDPTQDKEEQEKGYPENGEYLTLPLGEDDIDEIIRFLQQYKTKLKRLR
SIO_010081: SJPD1_RS00280
subclass of: SO_0000673
so part of: SJPD1_RS00280
location: complement(49202..49486)
location: region:49202-49486:-1
so has part: feature:49202-49486:-1:exon

WP_138070092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49202-49486:-1:exon

SJPD1_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00285
old locus tag: SJPD1_0056
so part of: sequence
location: complement(50062..50832)
location: region:50062-50832:-1
so has part: feature:50062-50832:-1:exon
subclass of: SO_0000010

position:50062:-1
position: 50062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50832:-1
position: 50832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50062-50832:-1:exon

SJPD1_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00285
old locus tag: SJPD1_0056
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVNTICRLLHIGKSTYYKYKKENYPIINFLHSFEKDDLLELEQTGRIEKLEFANFQNFVHKQSQFTLLLAELNSFLENDNDPETIHHYIDYLAFAFNTLNAKAMHYKRKFSYEKDVFPLALIDAYDDYIEHHSPELANFFSNDLKLLMQISEHYFPKEEGYSSIVAYFIEADFFPLVKACMYDYPQNMHLTIELCIRFNLYKYKSSYSYKEISEKLKTKIPWNEKGKVLEDMQQDFVKFKNELSQIMKDHESSSKS
SIO_010081: SJPD1_RS00285
subclass of: SO_0000673
so part of: SJPD1_RS00285
location: complement(50062..50832)
location: region:50062-50832:-1
so has part: feature:50062-50832:-1:exon

WP_138070093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50062-50832:-1:exon

SJPD1_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00290
old locus tag: SJPD1_0057
so part of: sequence
location: 51217..52002
location: region:51217-52002:1
so has part: feature:51217-52002:1:exon
subclass of: SO_0000010

position:51217:1
position: 51217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52002:1
position: 52002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51217-52002:1:exon

SJPD1_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00290
old locus tag: SJPD1_0057
inference: COORDINATES: protein motif:HMM:NF025655.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4373 domain-containing protein
translation: MSKKIEEQYWFSHDVNAKDDPKCLMLIDELGLEGYGIYWVLIETLRAQPDYRYPLKLISSLARKYATTSPKMQTVITQYGLFEVENEEFFLSKSLLRRMQKYELKVEQLRQNALKGVQKRKDEFEKQMQTLSLPYSTEQMLNNCSAIAELEYSSIEHSSLLKDNSLLGIERVDFKTFKKRLIESCPSFKFALCGNLGYSIEHKGFQLKNDLIFSLQNQSFLEKEEAFKIWGYLYSIPDKVFELANTQIQNQHKEENYANNN
SIO_010081: SJPD1_RS00290
subclass of: SO_0000673
so part of: SJPD1_RS00290
location: 51217..52002
location: region:51217-52002:1
so has part: feature:51217-52002:1:exon

WP_096045455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51217-52002:1:exon

SJPD1_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00295
old locus tag: SJPD1_0058
so part of: sequence
location: 51986..52246
location: region:51986-52246:1
so has part: feature:51986-52246:1:exon
subclass of: SO_0000010

position:51986:1
position: 51986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52246:1
position: 52246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51986-52246:1:exon

SJPD1_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00295
old locus tag: SJPD1_0058
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013133988.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MQTTISENAAKILEEINNNPMFKKLICLNQKQAAEAIGVSSTTLILWRKDGFGPQYIKVERGKRGRVLYPKTEIAEWLSRSTIKTM
SIO_010081: SJPD1_RS00295
subclass of: SO_0000673
so part of: SJPD1_RS00295
location: 51986..52246
location: region:51986-52246:1
so has part: feature:51986-52246:1:exon

WP_226372214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51986-52246:1:exon

SJPD1_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00300
old locus tag: SJPD1_0059
so part of: sequence
location: 52257..52682
location: region:52257-52682:1
so has part: feature:52257-52682:1:exon
subclass of: SO_0000010

position:52257:1
position: 52257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52682:1
position: 52682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52257-52682:1:exon

SJPD1_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00300
old locus tag: SJPD1_0059
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHENTDILKRLKTLESKLERLTREEMSSDLFIEFRFLFQGNQILTGIVDLTPNNGIIKRKFKLLKAQYAICKERAEFAVCLVSKNDRISTISEFYVTGESFMKITSFMPNVEEFFEFDKSFKAHCASLDQSEKRSSQCAS
SIO_010081: SJPD1_RS00300
subclass of: SO_0000673
so part of: SJPD1_RS00300
location: 52257..52682
location: region:52257-52682:1
so has part: feature:52257-52682:1:exon

WP_096045456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52257-52682:1:exon

SJPD1_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00305
old locus tag: SJPD1_0060
so part of: sequence
location: 52670..54883
location: region:52670-54883:1
so has part: feature:52670-54883:1:exon
subclass of: SO_0000010

position:52670:1
position: 52670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54883:1
position: 54883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52670-54883:1:exon

SJPD1_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00305
old locus tag: SJPD1_0060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFLVLFLFPLFLFADVASEKDTLADSLFTHDDAIVAPGACSFSCRAVADGYITQIIDIDAKSGTTHCEVYSRNNTSKALGVNANQQNLTCKAQANKSPGDYAGQLKSNSDTNYQLSGAKYETDTMTFSRFLTGMATLDPSIVDVSATNSTGMLQVKNSNMLYGTNISTTRQETFLSFFGVEDATTSSEIVSSVDSLNKANLGYFYNLFSNMSSIYSYLQNLLFAFVSAFFIVILGSKKLQAYLAKENDTTNYLSKLYIPLIAVTLFYIPVPSENNIKSSLMQSMIRTFMITSTKIADKAAVIAANTYLQKLYASVGANTMQGEATIYSLRDSAKAQKELYANVMQECKVRFPDAMTFQVDDADLAQKSIYNLNQTKEGVTAKACRSIERKWLIASKTFAQQSKYADQIAQSFGNNALQSKLNSINTFLNNRQNELGWINSAFIPSAAILVEMMPLVEVAKNGITQDQESNQEKIRNAYASGDEEKSLLEKIKTEGGSLFGAVMAKMTYMILPGVNTVFQVFNSVISGGVEMLTFIATFFSPLGGKAFSFISKGGGGATIQLASLVLAAMFVGLILKYIPLITSMIAGILAVVGWLFELTQYFFITPFVVAYAVTMRKTDKISEYLVTGIVIFFKPVLLVIFIYLGLFLYYLCMDVFLQFAEEQFYLLDAINQSFFVAMVLQLSLGLIKITSSFMAVYLMWKVILSAPGHVIKMIGLHNVGDFLEPISNKLERQSLV
SIO_010081: SJPD1_RS00305
subclass of: SO_0000673
so part of: SJPD1_RS00305
location: 52670..54883
location: region:52670-54883:1
so has part: feature:52670-54883:1:exon

WP_096045457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52670-54883:1:exon

SJPD1_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00310
old locus tag: SJPD1_0061
so part of: sequence
location: 54901..55245
location: region:54901-55245:1
so has part: feature:54901-55245:1:exon
subclass of: SO_0000010

position:54901:1
position: 54901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55245:1
position: 55245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54901-55245:1:exon

SJPD1_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00310
old locus tag: SJPD1_0061
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLQGNKVIETFLKSATWVIPVFAFLAWYPKKLIDVPHLIVSNDVGALILMYGYWIILAFTVMILAHIFDAGVKDFDEIKGYMVTKHWFWLLSGIGHILGFFAWKIFWPGGLY
SIO_010081: SJPD1_RS00310
subclass of: SO_0000673
so part of: SJPD1_RS00310
location: 54901..55245
location: region:54901-55245:1
so has part: feature:54901-55245:1:exon

WP_096045458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54901-55245:1:exon

SJPD1_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00315
old locus tag: SJPD1_0062
so part of: sequence
location: 55255..55656
location: region:55255-55656:1
so has part: feature:55255-55656:1:exon
subclass of: SO_0000010

position:55255:1
position: 55255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55656:1
position: 55656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55255-55656:1:exon

SJPD1_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00315
old locus tag: SJPD1_0062
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPETAEQTYQFFEEAQIVLKTLEEHISSFNQASKVFEKTNNDFEKIEKSIDGIGVKIAEKIQVNTIQAYLVDAVKELENVTKDLKKRKHEERSTLKIVFASTCLSALLTSIVFIAFEAANKPLLNLIYQFVH
SIO_010081: SJPD1_RS00315
subclass of: SO_0000673
so part of: SJPD1_RS00315
location: 55255..55656
location: region:55255-55656:1
so has part: feature:55255-55656:1:exon

WP_096045459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55255-55656:1:exon

SJPD1_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00320
old locus tag: SJPD1_0063
so part of: sequence
location: 55667..56446
location: region:55667-56446:1
so has part: feature:55667-56446:1:exon
subclass of: SO_0000010

position:55667:1
position: 55667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56446:1
position: 56446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55667-56446:1:exon

SJPD1_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00320
old locus tag: SJPD1_0063
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKNIAIINTKGGVGKSTLAFHVLPAILADRNFEIIEIDNNNKTTTTFLNTQILKGKITSLNIAEGTQKLEELVVTNMLDEDKISVIDAGGGDDSLKVIHSFIDQDLIADTLFIIPFMPDFVQLKNLVDTYNVLPDTAKILVVLNNADLSDPDHLMFIKGHEDYEIPDMESTFTHFAVCPKSPLFSYAASRNKETIKDLALLASQYNKNEILEYAKVKTKANRDSMTKIYRNWKISRNAKDYIESEAITQLKSIILGEQA
SIO_010081: SJPD1_RS00320
subclass of: SO_0000673
so part of: SJPD1_RS00320
location: 55667..56446
location: region:55667-56446:1
so has part: feature:55667-56446:1:exon

WP_096045460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55667-56446:1:exon

SJPD1_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00325
old locus tag: SJPD1_0064
so part of: sequence
location: 56443..56715
location: region:56443-56715:1
so has part: feature:56443-56715:1:exon
subclass of: SO_0000010

position:56443:1
position: 56443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56715:1
position: 56715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56443-56715:1:exon

SJPD1_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00325
old locus tag: SJPD1_0064
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFQNWVEQNTPLKRVSSLEPYRDEIQKLVSLNYTHNQIADYLREVRGLEISRQQVQKFLSKKTTKEKAVQAEKGETPKVSLEDKFKGFL
SIO_010081: SJPD1_RS00325
subclass of: SO_0000673
so part of: SJPD1_RS00325
location: 56443..56715
location: region:56443-56715:1
so has part: feature:56443-56715:1:exon

WP_096045461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56443-56715:1:exon

SJPD1_RS14465
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS14465
so part of: sequence
location: 56731..56886
location: region:56731-56886:1
so has part: feature:56731-56886:1:exon
subclass of: SO_0000010

position:56731:1
position: 56731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56886:1
position: 56886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56731-56886:1:exon

SJPD1_RS14465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS14465
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPRATVMLPKAIVCNHLLLNAIEKLPCATKEPLKGNRENIHTQRHVNGTR
SIO_010081: SJPD1_RS14465
subclass of: SO_0000673
so part of: SJPD1_RS14465
location: 56731..56886
location: region:56731-56886:1
so has part: feature:56731-56886:1:exon

WP_168171301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56731-56886:1:exon

SJPD1_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: mobF
locus tag: SJPD1_RS00330
old locus tag: SJPD1_0065
so part of: sequence
location: 56911..59766
location: region:56911-59766:1
so has part: feature:56911-59766:1:exon
subclass of: SO_0000010

position:56911:1
position: 56911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59766:1
position: 59766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56911-59766:1:exon

SJPD1_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: mobF
locus tag: SJPD1_RS00330
old locus tag: SJPD1_0065
inference: COORDINATES: protein motif:HMM:NF041492.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MLSIANMNSAQAAHYHAKDQNYYQQDKETSVWAGKGAEHLGLSGAIDIKQFERLCYGIHPSEERTLVDISERAGTDLTFSAPKSASILCELGDEHTNQLIRAAHDQAVQTTLAFVEDHYAQTREQKDGHREAISTGNLIIAKFQHDTSRENDPSLHTHCFIVNATQKENGEWRALLNDQLFTHKMFLGQTYRNELAKNLREQGFAIEITNAKEGFFEIEGVSKELIREFSQRREQVLEKYEELRQQYPGLEEEKLKEMATTGSRSVKDKNADRSVIKSNNIERAKTILAGKDLTYLNQLNSTQLHPEQQKLTAKDAVDLSIRIQSEKTSVFNREDVMKNAMKLSLGEHSLSAMQSAFDDHVNERSIVQLDKNAYSTPELLQKEFEIVEMAKNRTAPLISVQHVEQYLSHTPYNLTKGQQEAYTHILTSDEAISVIQGDAGTGKTFMLKAVRETLESQKQSSNLRGLAFTGKASEELERESGIPSTTLHAFFVNPPAEKNMVYIVDEASMVSSLQMHHLCEIARENHSKIVFIGDQKQFQSLGAGNMFSQLQKQSNIRIVEMTENKRAQTELMRSLYSSIKSKDLEEAFSILEKHQRLHETTDLERIKNEYLKDRHDTLLLVDTNANRRALNELIRADIVTQNEVTQSQLLSIKEAINLNEIEKHYSSNYQVGQIVVAQNAFQGFSAGQEAMITEIDHPSNTITVTKDDQRIKIDLSKAHAQAIQTFAIKEKAFGIGDKIVFTKNNRNLKFRNGETAVIQAIHGNIIKVQKGNKELAFDASKYPYIDHGYVITAHKSQGQTTSKVIAFTNAQMANLNRFYVQITRAKRDALIYTNSIATLKENTQKTQIKTSTLDYFRSAMQHEAHTNHNYERTFNEQKERRISRGSTLSILGDYCTKLKIALADLSRHFGLFKRDRREIESTRGKDQMKNILLKNEREKAAQSITQSRERK
SIO_010081: SJPD1_RS00330
subclass of: SO_0000673
so part of: SJPD1_RS00330
location: 56911..59766
location: region:56911-59766:1
so has part: feature:56911-59766:1:exon

WP_096045462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56911-59766:1:exon

SJPD1_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00335
old locus tag: SJPD1_0066
so part of: sequence
location: 59769..61337
location: region:59769-61337:1
so has part: feature:59769-61337:1:exon
subclass of: SO_0000010

position:59769:1
position: 59769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61337:1
position: 61337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59769-61337:1:exon

SJPD1_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00335
old locus tag: SJPD1_0066
inference: COORDINATES: protein motif:HMM:NF021897.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MSTILLCLLFNAGALWVFQKNLPIPCGAVFVLLCIVEYLVWAFIFKRQESINGRIFDDKAWVMGSYPNYYEQTEGNRWTASKRVKEIMSKGELFLDQFRFDRIVLYRLSPVYGLASKFNDFDCYADPVDFTQSGIIFGGMGSGKTEFYHSIIAQDKFDRVVAYDTKGDLVQKHYSVLKDIILNPYDQRSHIWNPFEEAKTSPFVTEIFLTNLFNALSGTQKDFFSASSKQRYMKLFNDILYNNSELSSNEQFDLFIQQLKEYFEENKNHERRSEADVASTMHLTFEFFDYMNFCIQNGSPTFTIKEYLSRKSCKLFLLSRDDQRSKLTPFFTGFLAALTAVMLSQEDQKTSLTLFALDEYLSFAQNLDSETIEGLHTRIRSKGGCLLPGVQYFPEQSNKADSAQGITQKMLNSAAYWFLFQGVDEYTLKKINSTIGKVRYRKEQIREQLVADPLNRKNYQIEESDLLNTSLFQSLGQNYEHITFVPSKRILYKGYTPRAELPSKKANYIQSENIERYYQRKY
SIO_010081: SJPD1_RS00335
subclass of: SO_0000673
so part of: SJPD1_RS00335
location: 59769..61337
location: region:59769-61337:1
so has part: feature:59769-61337:1:exon

WP_096045463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59769-61337:1:exon

SJPD1_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00340
old locus tag: SJPD1_0067
so part of: sequence
location: 61447..61746
location: region:61447-61746:1
so has part: feature:61447-61746:1:exon
subclass of: SO_0000010

position:61447:1
position: 61447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61746:1
position: 61746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61447-61746:1:exon

SJPD1_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00340
old locus tag: SJPD1_0067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856573.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HigB family toxin
translation: MRVISKKTLKDFYDQELYKDSKSSLESWHKEAIKADWETPVQIKEQYRNASILKNNRVVFNIHGNKYRLVVKINYPAKVVYVRFVGTHEQYDAINVEEI
SIO_010081: SJPD1_RS00340
subclass of: SO_0000673
so part of: SJPD1_RS00340
location: 61447..61746
location: region:61447-61746:1
so has part: feature:61447-61746:1:exon

WP_096045464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61447-61746:1:exon

SJPD1_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00345
old locus tag: SJPD1_0068
so part of: sequence
location: 61748..62110
location: region:61748-62110:1
so has part: feature:61748-62110:1:exon
subclass of: SO_0000010

position:61748:1
position: 61748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62110:1
position: 62110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61748-62110:1:exon

SJPD1_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00345
old locus tag: SJPD1_0068
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MEITPIRTEKDYTVALKRIDALMDAEPNTKEFDELDILVTLVEVYEEKHYKIDAPDPIAAIKFRMEQEGLKQKDLVSALGDETRVSKVLKGERSLTVDMIRKLHDQFKIPFESLFGRVAS
SIO_010081: SJPD1_RS00345
subclass of: SO_0000673
so part of: SJPD1_RS00345
location: 61748..62110
location: region:61748-62110:1
so has part: feature:61748-62110:1:exon

WP_096045465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61748-62110:1:exon

SJPD1_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00350
old locus tag: SJPD1_0069
so part of: sequence
location: complement(62139..62414)
location: region:62139-62414:-1
so has part: feature:62139-62414:-1:exon
subclass of: SO_0000010

position:62139:-1
position: 62139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62414:-1
position: 62414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62139-62414:-1:exon

SJPD1_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00350
old locus tag: SJPD1_0069
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014473653.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative addiction module antidote protein
translation: MQKLTDFNMSEYLDSQEAIMEYLSQVLESGDQDEFLRALGYLLKVKGMTQISKETGLDIESLDKTFQKGSDPEFSTIVRVMNAMGFTLQIK
SIO_010081: SJPD1_RS00350
subclass of: SO_0000673
so part of: SJPD1_RS00350
location: complement(62139..62414)
location: region:62139-62414:-1
so has part: feature:62139-62414:-1:exon

WP_096045466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62139-62414:-1:exon

SJPD1_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00355
old locus tag: SJPD1_0070
so part of: sequence
location: complement(62635..62722)
location: region:62635-62722:-1
so has part: feature:62635-62722:-1:exon
subclass of: SO_0000663

position:62635:-1
position: 62635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62722:-1
position: 62722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62635-62722:-1:exon

SJPD1_RS00355
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS00355
old locus tag: SJPD1_0070
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(62686..62688),aa:Ser,seq:tga)
SIO_010081: SJPD1_RS00355
subclass of: SO_0000673
so part of: SJPD1_RS00355
location: complement(62635..62722)
location: region:62635-62722:-1
so has part: feature:62635-62722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62635-62722:-1:exon

SJPD1_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00360
old locus tag: SJPD1_0071
so part of: sequence
location: complement(62757..62830)
location: region:62757-62830:-1
so has part: feature:62757-62830:-1:exon
subclass of: SO_0000663

position:62757:-1
position: 62757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62830:-1
position: 62830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62757-62830:-1:exon

SJPD1_RS00360
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS00360
old locus tag: SJPD1_0071
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(62796..62798),aa:Cys,seq:gca)
SIO_010081: SJPD1_RS00360
subclass of: SO_0000673
so part of: SJPD1_RS00360
location: complement(62757..62830)
location: region:62757-62830:-1
so has part: feature:62757-62830:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62757-62830:-1:exon

SJPD1_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00365
old locus tag: SJPD1_0072
so part of: sequence
location: complement(62853..62939)
location: region:62853-62939:-1
so has part: feature:62853-62939:-1:exon
subclass of: SO_0000663

position:62853:-1
position: 62853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62939:-1
position: 62939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62853-62939:-1:exon

SJPD1_RS00365
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS00365
old locus tag: SJPD1_0072
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(62903..62905),aa:Leu,seq:taa)
SIO_010081: SJPD1_RS00365
subclass of: SO_0000673
so part of: SJPD1_RS00365
location: complement(62853..62939)
location: region:62853-62939:-1
so has part: feature:62853-62939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62853-62939:-1:exon

SJPD1_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00370
old locus tag: SJPD1_0073
so part of: sequence
location: complement(62969..63043)
location: region:62969-63043:-1
so has part: feature:62969-63043:-1:exon
subclass of: SO_0000663

position:62969:-1
position: 62969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63043:-1
position: 63043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62969-63043:-1:exon

SJPD1_RS00370
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS00370
old locus tag: SJPD1_0073
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(63009..63011),aa:Gly,seq:gcc)
SIO_010081: SJPD1_RS00370
subclass of: SO_0000673
so part of: SJPD1_RS00370
location: complement(62969..63043)
location: region:62969-63043:-1
so has part: feature:62969-63043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62969-63043:-1:exon

SJPD1_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: ilvD
locus tag: SJPD1_RS00375
old locus tag: SJPD1_0074
so part of: sequence
location: 63172..64851
location: region:63172-64851:1
so has part: feature:63172-64851:1:exon
subclass of: SO_0000010

position:63172:1
position: 63172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64851:1
position: 64851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63172-64851:1:exon

SJPD1_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: ilvD
locus tag: SJPD1_RS00375
old locus tag: SJPD1_0074
EC number: 4.2.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012025204.1
GO function: GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO process: GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroxy-acid dehydratase
translation: MRSDQVKKGYNRAPHRSLFRATGLKDEDFNKPFIGVANSYIDIIPGHFFLHEYGVIIKDEIRKNGCVPFEFNTIGVDDGIAMGHDGMLYSLPSRELIANSIETMMNAHMLDAMICIPNCDKIVPGMIMGALRVNVPTVFVSGGPMKKGYTKEGAPLDLNSAFEAVGKFEKGDITESELTDIECNACPSGGSCSGMFTANSMNTLMEAMGIALPGNGTIPALTPEREVLLRAAAKRICEIAVDDRFKLRNILNEKAVRNAFAIDMAMGGSSNTVLHMLAIAKEAGVNFAIKDINEISKNVSHIAKISPSLSTVHMEDINRAGGMNAVMKEVSRRDNGILYLDNLTVTGETVGERIANAEIKDTAIIHTLENPYSKVGGLAILFGNLALEGCVIKTAGIVGARQFIGKAVCFDSQQEALAGIVGGKVTKGDVVVIRYEGPRGGPGMQEMLSPTSLIMGMGLGADVALITDGRFSGATRGLSIGHVSPEAAEGGLIGLLQDGDTIQIDVDAYTIEALIDEAELARRKASFKPKVKAIQGSWLKQYRQLVTNASSGAILKTDA
SIO_010081: SJPD1_RS00375
subclass of: SO_0000673
so part of: SJPD1_RS00375
location: 63172..64851
location: region:63172-64851:1
so has part: feature:63172-64851:1:exon

WP_096045467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63172-64851:1:exon

SJPD1_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00380
old locus tag: SJPD1_0075
so part of: sequence
location: 64851..65489
location: region:64851-65489:1
so has part: feature:64851-65489:1:exon
subclass of: SO_0000010

position:65489:1
position: 65489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64851-65489:1:exon

SJPD1_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00380
old locus tag: SJPD1_0075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855846.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarC family protein
translation: MSEFLNLLLQHTITMMAIVDPLGVSAIMLSLLPQSTTKEHINKIAWKATMTIIVAFFVVLLTGNFLLNLFGIEIDSLKVMGGIILLLTAIKMVQGSIESKNQTEEEREEAIKNDEFSVIPLGIPITFGPGIFATIIILRGHSEGIISLAALIIAYLIVALSVYLAFKNSIYIRHYLGITGQKIVSRLMGLIVGAIAVQFIVGGVSVLAKHYM
SIO_010081: SJPD1_RS00380
subclass of: SO_0000673
so part of: SJPD1_RS00380
location: 64851..65489
location: region:64851-65489:1
so has part: feature:64851-65489:1:exon

WP_096045468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64851-65489:1:exon

SJPD1_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00385
old locus tag: SJPD1_0076
so part of: sequence
location: 65499..65699
location: region:65499-65699:1
so has part: feature:65499-65699:1:exon
subclass of: SO_0000010

position:65499:1
position: 65499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65699:1
position: 65699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65499-65699:1:exon

SJPD1_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00385
old locus tag: SJPD1_0076
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768276.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQGGWTCPHDVEGICDIIKKECDPGDRGCVLYGKAKFSSESSPSSEAFEKRMERKMREIMGEDTL
SIO_010081: SJPD1_RS00385
subclass of: SO_0000673
so part of: SJPD1_RS00385
location: 65499..65699
location: region:65499-65699:1
so has part: feature:65499-65699:1:exon

WP_096045469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65499-65699:1:exon

SJPD1_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: galU
locus tag: SJPD1_RS00390
old locus tag: SJPD1_0077
so part of: sequence
location: 66270..67139
location: region:66270-67139:1
so has part: feature:66270-67139:1:exon
subclass of: SO_0000010

position:66270:1
position: 66270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67139:1
position: 67139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66270-67139:1:exon

SJPD1_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: galU
locus tag: SJPD1_RS00390
old locus tag: SJPD1_0077
EC number: 2.7.7.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855848.1
GO function: GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO process: GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UTP--glucose-1-phosphate uridylyltransferase GalU
translation: MSSISKYSKINSLKSVKKCLFPAAGYGTRFLPATKAMPKEMLPVLTKPLIQYGVEEAVSAGIDTMAIVTGRGKRAIEDHFDVSYELEHQIKGTSKESYLTEIRNLIDNCTFSYTRQVEMKGLGHAILTGKTLIGDEPFAVILADDLCDNNDDDPVLKQMVEVYEKYRCCVVAIEEVPKEDTNKYGVIDGKIVDGNESVLRVSNMVEKPDPKDAPTNLAIIGRYILTPEIFEVIENTKPGKGGEIQITDALLELARQGKVIAYKFTGRRFDCGSIEGFVEATNYFHDKAK
SIO_010081: SJPD1_RS00390
subclass of: SO_0000673
so part of: SJPD1_RS00390
location: 66270..67139
location: region:66270-67139:1
so has part: feature:66270-67139:1:exon

WP_191342061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66270-67139:1:exon

SJPD1_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00395
old locus tag: SJPD1_0078
so part of: sequence
location: 67291..68931
location: region:67291-68931:1
so has part: feature:67291-68931:1:exon
subclass of: SO_0000010

position:67291:1
position: 67291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68931:1
position: 68931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67291-68931:1:exon

SJPD1_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00395
old locus tag: SJPD1_0078
EC number: 6.3.4.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855849.1
GO function: GO:0003883 - CTP synthase activity [Evidence IEA]
GO process: GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CTP synthase
translation: MSNHETKYIFITGGVLSSLGKGIAAASISTLLKNVGFKVSILKADPYINVDPGTMSPLEHGEVFVTDDGAETDLDLGHYERFLDENLTQANNFTTGRVYSAVIEKERRGDYLGKTIQVIPHIVDEIANRIKEAGRGQDILIVEIGGTVGDIEGLPFLEAIRSLKSELGKRRAMNIHLTLVPFIKAAGELKTKPTQHSVQELRRIGITPDMLICRSEYPLPKELKNKLAFSCGVERNSVIECLDATTIYQVPLSFLKENILVPISETLDLGDLTPHMDEWDILVKRVIAPRDELMIAFVGKYLDLKESYKSLTESLIHAGANLNAKVKIRWVDSEMIEEKGCEEILSDVDGILVAGGFGERGVVGKMAAIRFAREHKIPYLGICLGMQLAMIEFARNVLHLEDANSAEFNPTCKNPIIYLIDSFMDASGQKQLRTFQSPLGGTMRLGGYECETKEGSLLRSVYDGAKVIRERHRHRYEANPAYREAFEKEGLIVSGESNGLIEAVELQGHPWFLGVQFHPEFTSRLTNPNKTILGFAKAALLQRQNG
SIO_010081: SJPD1_RS00395
subclass of: SO_0000673
so part of: SJPD1_RS00395
location: 67291..68931
location: region:67291-68931:1
so has part: feature:67291-68931:1:exon

WP_096045470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67291-68931:1:exon

SJPD1_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: recJ
locus tag: SJPD1_RS00400
old locus tag: SJPD1_0079
so part of: sequence
location: 68924..70507
location: region:68924-70507:1
so has part: feature:68924-70507:1:exon
subclass of: SO_0000010

position:68924:1
position: 68924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70507:1
position: 70507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68924-70507:1:exon

SJPD1_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: recJ
locus tag: SJPD1_RS00400
old locus tag: SJPD1_0079
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855850.1
GO function: GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded-DNA-specific exonuclease RecJ
translation: MARLLSKEEIKRILQSRFENDECTRLNEIPKPSSLKDIAKASKRIADAMRNHERIAIVGDYDVDGVISSVILSQFFDDLGVDYSLIIPNRFTDGYGLNPDIVAKLDVHVIITVDNGISAIEAAQICKHQGIDLIITDHHSIPSILPDAYAIVNPKQEDCTFPHCEICGAQVAWYLVAALKEELGVDYNLSSFLDLLCIAIMADMMELVGMNRVMVKKGIVELNHSKRAAFEAIKQYFGKKTLEGDDISFLIGPLINSSGRMEDAIFSYEFLKSKNVDDALQKLDYIVSLNEARKEEERLLFESTLPYVKENENIIVAWGEEWHEGIVGIVASRLSKRFKKPAIVFSIKDEKAKGSARGIGNVDILELIRSQEPLLLGFGGHKGAAGVSIEIKHLEQFRINLVEASSQFTQEAMEADNDLLGEISADQIDFELLEILENQEPYGQKNPKPSFLLRNIAVKVDRLIGKDGQHLKLILQEGSNALEALFFNYDIKAKQGDRIDILFTVSRNDYRGLVTPQLLIKQIVKKY
SIO_010081: SJPD1_RS00400
subclass of: SO_0000673
so part of: SJPD1_RS00400
location: 68924..70507
location: region:68924-70507:1
so has part: feature:68924-70507:1:exon

WP_210394389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68924-70507:1:exon

SJPD1_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00405
old locus tag: SJPD1_0080
so part of: sequence
location: complement(70504..71163)
location: region:70504-71163:-1
so has part: feature:70504-71163:-1:exon
subclass of: SO_0000010

position:70504:-1
position: 70504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71163:-1
position: 71163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70504-71163:-1:exon

SJPD1_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00405
old locus tag: SJPD1_0080
EC number: 2.1.1.77
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855851.1
GO function: GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein-L-isoaspartate(D-aspartate) O-methyltransferase
translation: MPQTAQFNTKISFQKHKKMADEIAKICPISQNVYDAFCQSERELFVPQGMSMHAYKLDALPLVANQWISSPLTVAKMTEALTCKGADSVLEIGCGSGYQALILSKVIRRVFTIERIERLLKEARERFKTLGITNIHTRFDDGQNGWREFAPYDRILFSASTPEVPQKLFEQLKVGGILVAPIEKGEKQIITRFIKTEEGIRKEALDNCLFVPVKDGREF
SIO_010081: SJPD1_RS00405
subclass of: SO_0000673
so part of: SJPD1_RS00405
location: complement(70504..71163)
location: region:70504-71163:-1
so has part: feature:70504-71163:-1:exon

WP_096045472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70504-71163:-1:exon

SJPD1_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00410
old locus tag: SJPD1_0081
so part of: sequence
location: complement(71141..71896)
location: region:71141-71896:-1
so has part: feature:71141-71896:-1:exon
subclass of: SO_0000010

position:71141:-1
position: 71141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71896:-1
position: 71896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71141-71896:-1:exon

SJPD1_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00410
old locus tag: SJPD1_0081
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768282.1
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrilase-related carbon-nitrogen hydrolase
translation: MISNPMLCALQFAYEGQSFEENFETLQALLEQTPQNSISLAPELCLSAYSYDKMEEAAEFSATILSKLAKLSVGKTYGLTLIEKIDTKYVNNFKLFHHGKLIYTQSKAKLFTLGEEEHYFSAGNIEEINFVEINGIKIAVLICFELRFPSLWEKIKGADLILIPAYWGKLRKKHFEVLTTALAIANQAYVLCANSADESMAKSSAIISPLGDVTSDDHHNLIMHTFDFHEIKKIRRYLDIGLTHNAANGSI
SIO_010081: SJPD1_RS00410
subclass of: SO_0000673
so part of: SJPD1_RS00410
location: complement(71141..71896)
location: region:71141-71896:-1
so has part: feature:71141-71896:-1:exon

WP_226372215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71141-71896:-1:exon

SJPD1_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00415
old locus tag: SJPD1_0082
so part of: sequence
location: complement(71886..72908)
location: region:71886-72908:-1
so has part: feature:71886-72908:-1:exon
subclass of: SO_0000010

position:71886:-1
position: 71886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72908:-1
position: 72908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71886-72908:-1:exon

SJPD1_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00415
old locus tag: SJPD1_0082
EC number: 1.17.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:YP_002343674.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleotide-diphosphate reductase subunit beta
translation: MERKKIYNPNSDESLQDRKIFGGNPHGILNFTKAKYSWALKLWDMMEANTWFPREVDTTKDVIDYNRNLTDAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINACLSRQSYEEANHSKSYAVMAEAICDNTDLIYEMEKHDEVLRRKNDYISSVYEELAGDVTDEKLILAMFANQILEGIYFYSGFTAIYALARAGRMLGSAQMIRFIQRDEITHLLIFQNMINSAQKEYPELFTTELKAKVYEMFQKAGDLEIEWGKYITKNQIMGFTDDIIETYIHYLIDDRLTAVGFEKLYNAKHPIKWVDDFSKFNDQKTNFFEGNVSNYSKGSLSFDDF
SIO_010081: SJPD1_RS00415
subclass of: SO_0000673
so part of: SJPD1_RS00415
location: complement(71886..72908)
location: region:71886-72908:-1
so has part: feature:71886-72908:-1:exon

WP_087437388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71886-72908:-1:exon

SJPD1_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00420
old locus tag: SJPD1_0083
so part of: sequence
location: complement(72946..73680)
location: region:72946-73680:-1
so has part: feature:72946-73680:-1:exon
subclass of: SO_0000010

position:72946:-1
position: 72946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73680:-1
position: 73680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72946-73680:-1:exon

SJPD1_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00420
old locus tag: SJPD1_0083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855854.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO process: GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic ribonucleoside-triphosphate reductase activating protein
translation: MLEKLASTESAFNLLKNVLADKAIHSITKFTTLDYPHHLASIFWFAKCNMACPYCYNPQIVRDSGTISLQTALEFLQSRQGRLDSVVLSGGECTLYPNLEPFCEAIKALNYKIKIDTNGSHPELLAHLIMKKLVDYIALDYKAPLDQYETLTHYHHSERFEESLKILIQSDIPFEVRTTLHSDLLTPIDINTIIKDLHVKGYHGTYYLQNYLHVEPTLGETKMQQNQFNLSQLSPLIPIELRNF
SIO_010081: SJPD1_RS00420
subclass of: SO_0000673
so part of: SJPD1_RS00420
location: complement(72946..73680)
location: region:72946-73680:-1
so has part: feature:72946-73680:-1:exon

WP_226372216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72946-73680:-1:exon

SJPD1_RS14795
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nrdD
locus tag: SJPD1_RS14795
old locus tag: SJPD1_0084
so part of: sequence
location: complement(73616..73780)
location: region:73616-73780:-1
so has part: feature:73616-73780:-1:exon
subclass of: SO_0000010

position:73616:-1
position: 73616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73780:-1
position: 73780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73616-73780:-1:exon

SJPD1_RS14795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nrdD
locus tag: SJPD1_RS14795
old locus tag: SJPD1_0084
EC number: 1.1.98.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855855.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic ribonucleoside-triphosphate reductase
translation: MSQTEILEKLKEKRTKCIVYTRVMGYHRPVESFNVGKTGEHRERVQFVEKCPCR
SIO_010081: SJPD1_RS14795
subclass of: SO_0000673
so part of: SJPD1_RS14795
location: complement(73616..73780)
location: region:73616-73780:-1
so has part: feature:73616-73780:-1:exon

WP_121494809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73616-73780:-1:exon

SJPD1_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00425
old locus tag: SJPD1_0085
so part of: sequence
location: complement(73777..75882)
location: region:73777-75882:-1
so has part: feature:73777-75882:-1:exon
subclass of: SO_0000010

position:73777:-1
position: 73777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75882:-1
position: 75882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73777-75882:-1:exon

SJPD1_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00425
old locus tag: SJPD1_0085
EC number: 1.17.4.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855856.1
GO function: GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleoside triphosphate reductase
translation: MLTKVLKRDGTTEEFQPYKIEDAIKKAFKSEGVTYDASIFQEILKRIEKKRVAAVEDFQDMIEQELYKTRYFDVMRSFILYRHTHKMQREHIYGLNEDTTYVNSTQTIEEYIGKSDWRIKANSNTGYSNAGLVNNTAGKVIANYWLDKIYSKEEGLAHRNGDYHIHDLDCLTAYCAGWSLRVLLDEGFNGVRGRVESRPPMHFREALGQMANFLGILQSEWAGAQAFSSFDTYLAPYAFKDKISYKEIKKAIRSFIYNLNVPARWGQSPFTNITIDWTVPKDLADQIPTSNQRHLFKEINDAELMEEAQKRGVNSLEAMTYKHFQKEMNLINKAYYEVMTEGDKTGQPFTFPIPTVNITEDFDWDGENTELLFENTAKIGSSYFQNFIGSQYVRDADGKLVENPKAYKPGHVRSMCCRLQLDLRELLKRGGGLFGSAEMTGSIGVVTLNMARLGYLYKGNKKELMERFEYLMDLAKSTLEKKRVFVQEMYNRGLYPYTARYLPGFNSHFSTIGVNGINEMIRNFTDDKHNIADAYGMEFAHEILEFVRNKMVTYQEETGNLYNLEATPAEGTTYRFAKEDKKRYPEIIQAGSGKNVYYTNSSQLPANFTDDPFEALDLQDDLQCSYTGGTVLHLYMKERISSSEACKKLVRNVITNYRMPYLTITPVFSVCEKHGYISGEHEFCPKCDEELVEHYRKGEAS
SIO_010081: SJPD1_RS00425
subclass of: SO_0000673
so part of: SJPD1_RS00425
location: complement(73777..75882)
location: region:73777-75882:-1
so has part: feature:73777-75882:-1:exon

WP_096045474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73777-75882:-1:exon

SJPD1_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00430
old locus tag: SJPD1_0086
so part of: sequence
location: complement(76092..76790)
location: region:76092-76790:-1
so has part: feature:76092-76790:-1:exon
subclass of: SO_0000010

position:76092:-1
position: 76092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76790:-1
position: 76790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76092-76790:-1:exon

SJPD1_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00430
old locus tag: SJPD1_0086
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002781345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate/glutamate racemase family protein
translation: MKTIGLIGGMSWESTQSYYTLLNEGVKAKLGGLHSAKIFLYSVDFAPIERFQSEGKWEEAALVIQEAALSLERAGVDFILLCTNTMHKILPLITPHVKTPFLHIAEATAKALNAQDAHKAILLGTQFTMQETFYTEVLKSHHIDVVIPDAKAIEIINQIIFQELCVGQIKTTSKEIFLKIINDLKCHDEQIDSVILGCTEIGLLLDQQSAYLPLFDTTILHVNEALTHALNE
SIO_010081: SJPD1_RS00430
subclass of: SO_0000673
so part of: SJPD1_RS00430
location: complement(76092..76790)
location: region:76092-76790:-1
so has part: feature:76092-76790:-1:exon

WP_096045475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76092-76790:-1:exon

SJPD1_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00435
old locus tag: SJPD1_0087
so part of: sequence
location: complement(76833..79199)
location: region:76833-79199:-1
so has part: feature:76833-79199:-1:exon
subclass of: SO_0000010

position:76833:-1
position: 76833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79199:-1
position: 79199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76833-79199:-1:exon

SJPD1_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00435
old locus tag: SJPD1_0087
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855858.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleoside-diphosphate reductase subunit alpha
translation: MLTVQKRNGRIEPLDISKIQKYTSSAIKGLDNVSQSELEVDAKIQFRDQITTEEIQKTLIKTAVDKIDIDRPNWTFVAARLFLYDLYHKVNGFTGYGSFAEYLDRGEKEGRIALGMKAKYNLKDLDAYLKPERDLQFTYLGIKTLHDRYLIKNRQGKPIELPQHMFMAIAMFLAQNELNSQDWAKKFYDVISKFEVMLATPTLSNARTTRHQLSSCYIGSTPDNIEGIFDSYKEMSLLSKFGGGIGWDWNLVRSMGGMIDGHKNAAGGVIPFLKITNDIAIAVDQLGTRKGAIAVYLEPWHMDISDFLDLKKNSGEERRRAHDLFPALWINDLFMKRVEENAMWTLFDPAEAGDLAEVYGEEFERRYLAYEQNDAISKEYVPAKELWKKILTSYFESGSPFLCFKDNANRANPNDHTGIIRSSNLCTEIFQNTAPNHYKVKIVYNDQTIDTYEESDLVKVDSGVTKEAKKVTALDSINGKDIFIVEKEMVEGKTAVCNLASVNLSKIHTKEEIERTIPIAIRMLDNVIDLNFYPHAKVKHTNLKSRAIGLGVMGEAQMLAEQHIAWGSYEHFSKIDEVMEAVSYNAILASSNLAIEKGIYPEFQGSKWSRGIFPIDTANDEAKKLVDRGGLFGYMYDWESLREKVKKNGMRNGYLMAVAPTSSISILVGTTQTIEPVYKRKWFEENLSGMIPVVVPNLSPDTWNFYTPAYELDQRVLIKAGAIRQKWIDQGQSLNIFITLDKASGKYLNDIYMLGWKLGIKSTYYLRSQSPENKLEVADRSIECEGCQ
SIO_010081: SJPD1_RS00435
subclass of: SO_0000673
so part of: SJPD1_RS00435
location: complement(76833..79199)
location: region:76833-79199:-1
so has part: feature:76833-79199:-1:exon

WP_096045476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76833-79199:-1:exon

SJPD1_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: purB
locus tag: SJPD1_RS00440
old locus tag: SJPD1_0088
so part of: sequence
location: complement(79199..80527)
location: region:79199-80527:-1
so has part: feature:79199-80527:-1:exon
subclass of: SO_0000010

position:80527:-1
position: 80527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79199-80527:-1:exon

SJPD1_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: purB
locus tag: SJPD1_RS00440
old locus tag: SJPD1_0088
EC number: 4.3.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002847892.1
GO function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylosuccinate lyase
translation: MVERYAREEMKKHWTIEAKYDAWLRVEKAATKAWNKLGLIPNSDCEKIVKNAKFNIDRIDEIEKVTRHDVIAFLTSVADSLGEESRWVHYGMTSSDCIDTAVALQMRDSLHVIIEDVKTLMESLKTRAMEHKMTLMVGRSHGIHGEPITFGLVLAIWYEEIKRSLKNLENVMDIISVGQISGAMGNMAHSPIELEEYVCEELGLTPAPVSNQVIQRDRYAALMNALALLASSCEKIAVAIRHYQRTEVYECEEFFEKGQKGSSAMPHKRNPVLSENITGLCRMIRSYAIPAMENVALWHERDISHSSVERFILPDGFITTDFMLNRLNSVISKLVVYPENMMRNLNLTGGLVFSQRILLELPLKNVSREDAYKIVQRNAMKVWEDLQHGKPALNSEGESLYLQNLLSDEDLRAELSETEIRACFDYAYYTKNVDKIFQRVFK
SIO_010081: SJPD1_RS00440
subclass of: SO_0000673
so part of: SJPD1_RS00440
location: complement(79199..80527)
location: region:79199-80527:-1
so has part: feature:79199-80527:-1:exon

WP_096045477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79199-80527:-1:exon

SJPD1_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00445
old locus tag: SJPD1_0089
so part of: sequence
location: 80645..81553
location: region:80645-81553:1
so has part: feature:80645-81553:1:exon
subclass of: SO_0000010

position:80645:1
position: 80645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81553:1
position: 81553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80645-81553:1:exon

SJPD1_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00445
old locus tag: SJPD1_0089
EC number: 5.4.99.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768290.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: MAYTLKKFVLEKPTLAFRFLMDTFEISMGEAQKIVDKRRVFVEGEQLLKKSSLIVGTISVVVFEGESKGLQPVFETEDFAVFEKPSGVMIHPRKRSDGYTLNDEIKSLYGKDANAAHRIDKSTSGLVLVGKHKQAEIELKRIFATRHVQKSYLALVHGKIDDVLMIDEKLKRDVETSQIRLKVHVDERGKASQTKITPLCYFADKDATLVEAIPYTGRQHQIRVHLFHVKHHIVGDPIYGIDEEDAERYLEGSMSAEEQLEITQSSRLLLHAQTLAFEYKGIPYKIESQVDAKTLFYNLMKG
SIO_010081: SJPD1_RS00445
subclass of: SO_0000673
so part of: SJPD1_RS00445
location: 80645..81553
location: region:80645-81553:1
so has part: feature:80645-81553:1:exon

WP_096045478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80645-81553:1:exon

SJPD1_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00450
old locus tag: SJPD1_0090
so part of: sequence
location: 81556..82170
location: region:81556-82170:1
so has part: feature:81556-82170:1:exon
subclass of: SO_0000010

position:81556:1
position: 81556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82170:1
position: 82170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81556-82170:1:exon

SJPD1_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00450
old locus tag: SJPD1_0090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768291.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
translation: MKTIILDGLRVAPSKVVCVGRNYVAHIKELNNEVPTSMVLFMKPNAALSSELITGKQTPLHYEGEISFLIKKGAIAAVGFGLDLTNRELQSELKGKGLPWERAKAFDGAAIMSPFVSIDALDVNLLSMQLWINDVLVQEGNIDLMIYKPLTVIEEINSFSTLIDNDIVMSGTPKGVGSYVKGDKFVGKIFIADREIISQEWIAK
SIO_010081: SJPD1_RS00450
subclass of: SO_0000673
so part of: SJPD1_RS00450
location: 81556..82170
location: region:81556-82170:1
so has part: feature:81556-82170:1:exon

WP_096045479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81556-82170:1:exon

SJPD1_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rlmN
locus tag: SJPD1_RS00455
old locus tag: SJPD1_0092
so part of: sequence
location: complement(82283..83359)
location: region:82283-83359:-1
so has part: feature:82283-83359:-1:exon
subclass of: SO_0000010

position:82283:-1
position: 82283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83359:-1
position: 83359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82283-83359:-1:exon

SJPD1_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rlmN
locus tag: SJPD1_RS00455
old locus tag: SJPD1_0092
EC number: 2.1.1.192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768293.1
GO function: GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
translation: MERQNIFDLSKEELSEIIKPSFRAKQIYQWLYQKYVNSFDEMKNLPKELKDQLESQYYLDPLVIAKVEESRDGSKKYLFALKDGNTVESVLLPMKQEQNDEEGKLIHHTRYTICISSQVGCKIGCAFCLTGKSGFKRNLTAGEITSQILMIKRDNAIAENRRVNIVYMGMGEPLDNLANVSKAVRIFTDIDGLSISPRRQTISTSGLSSQIEKLGLMELGVLLAISLHAVDDELRQTLMPINKAYNIESIINAVKAFPIDARKRVMFEYLVMKGVNDDQKSARKLVKLLHGIKSKVNLIYFNPHVGSEFARPLEKDMIAFQQYLVDHGVLCTIRQSKGLDISAACGQLKDKEKNNDNA
SIO_010081: SJPD1_RS00455
subclass of: SO_0000673
so part of: SJPD1_RS00455
location: complement(82283..83359)
location: region:82283-83359:-1
so has part: feature:82283-83359:-1:exon

WP_096045480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82283-83359:-1:exon

SJPD1_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00460
old locus tag: SJPD1_0093
so part of: sequence
location: complement(83366..83914)
location: region:83366-83914:-1
so has part: feature:83366-83914:-1:exon
subclass of: SO_0000010

position:83366:-1
position: 83366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83914:-1
position: 83914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83366-83914:-1:exon

SJPD1_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00460
old locus tag: SJPD1_0093
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855864.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: purine-nucleoside phosphorylase
translation: MILCAGRNETFDFAKPIGVGLIESAITLTKLILEEKPAFLFFVGTAGSYGKYQPFDLVHSHSAANIELCFLQNKCYTPLQNSIEVEKVHVSRGTIYPSPIVNSSNYITTDITLAHKMIEKNIDLENMEFFSVVSVANHFHIPCSGLFVVTNYCDENAHRDFIHNHAQAKELITLHVEKNMKI
SIO_010081: SJPD1_RS00460
subclass of: SO_0000673
so part of: SJPD1_RS00460
location: complement(83366..83914)
location: region:83366-83914:-1
so has part: feature:83366-83914:-1:exon

WP_096045481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83366-83914:-1:exon

SJPD1_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: hisF
locus tag: SJPD1_RS00465
old locus tag: SJPD1_0094
so part of: sequence
location: complement(83911..84669)
location: region:83911-84669:-1
so has part: feature:83911-84669:-1:exon
subclass of: SO_0000010

position:83911:-1
position: 83911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84669:-1
position: 84669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83911-84669:-1:exon

SJPD1_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: hisF
locus tag: SJPD1_RS00465
old locus tag: SJPD1_0094
EC number: 4.3.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009649493.1
GO function: GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: imidazole glycerol phosphate synthase subunit HisF
translation: MEHFAKRIIPCLDVKNGRVVKGVNFVGLKDAGDPVEIAKRYNEEGADELTFLDITASHEGRGTIVDIVEKVAREVFIPLTVGGGIRTLDDIYALLHVGCDKVSINSPAIANPLFIDESSKRFGSQCIVVAIDAKRTGDSWHVFINGGRIDTGIDALTWAKEVQERGAGEILLTSMDCDGAKNGYDIPLTSQMSTMLNIPVIASGGAGTMEHIKDAFLNGADAALAASIFHFKEIDIMDLKHYLAHEGIAVRL
SIO_010081: SJPD1_RS00465
subclass of: SO_0000673
so part of: SJPD1_RS00465
location: complement(83911..84669)
location: region:83911-84669:-1
so has part: feature:83911-84669:-1:exon

WP_096045482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83911-84669:-1:exon

SJPD1_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rsmA
locus tag: SJPD1_RS00470
old locus tag: SJPD1_0095
so part of: sequence
location: 84790..85665
location: region:84790-85665:1
so has part: feature:84790-85665:1:exon
subclass of: SO_0000010

position:84790:1
position: 84790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85665:1
position: 85665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84790-85665:1:exon

SJPD1_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rsmA
locus tag: SJPD1_RS00470
old locus tag: SJPD1_0095
EC number: 2.1.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768296.1
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MKVKKIGYKLIEAKKKFGQNFLKDTTVVSKIIQSMPRNERKLVEIGPGLGDLTQELLKVKALVAYEVDEDLCVYLRKKYSTKIDEGELTLVQTDVLKQFEKGSLCEEPYDLVANLPYYIATTIILEALEDPNCKSMTVMIQKEVAEKFAALPKTKEFTSLAILAQSIGTATILFDVSPESFEPQPKVVSSILKIDKQKEFVEGKFSGLFESNEQLQKFKKYLRCSFQSPRKTWLKNISSEFDKSYIERVMYDQSLPITIRPHEISVLSHHLLFKTLRLNDARKRSNATTEQ
SIO_010081: SJPD1_RS00470
subclass of: SO_0000673
so part of: SJPD1_RS00470
location: 84790..85665
location: region:84790-85665:1
so has part: feature:84790-85665:1:exon

WP_096045483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84790-85665:1:exon

SJPD1_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00475
old locus tag: SJPD1_0096
so part of: sequence
location: 85628..87619
location: region:85628-87619:1
so has part: feature:85628-87619:1:exon
subclass of: SO_0000010

position:85628:1
position: 85628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87619:1
position: 87619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85628-87619:1:exon

SJPD1_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00475
old locus tag: SJPD1_0096
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768297.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease J
translation: MQENEVTQQQNSNETSKEKIPNSTGNPKQPSHTNTKKQVSQTPQNGEVKEPMSEGGEKKPRNNRRRKGNKSPAASIEGNELWQRDMKKAIEANQKMHKDRLNRSNLIDQSSKGKIKITPLGGLGEIGGNICVFETDTSAIVLDVGMSFPSEDMHGVDILVPDFSYLRQIKKKIAGIIISHAHEDHIGAVSYLFKEMQFPLYATPLPLGMLANKFDEHGLKAYKKYFRPVEKRKIYKIGEFEIEWIHITHSIIDASSLAITTEAGTIIHTGDFKIDHTPIDGFVTDLNRFAAYGEKGVLCLMSDSTNSYKEGITRSESTVGKTFDSIFAKAKGRVIMSTFSSNIHRVYQAIDYGLKYGRKVSVIGRSMERNLFTAIELGYIQLDKSIFIDPHEVNKYPDKDVLIVTTGSQGETMSALYRMATDEHRHVKIKSTDQIIISAKAIPGNEGSVSKVLNFLLKSGANVAYQDFSEIHVSGHAAQEEQKLILRLVKPRFFLPVHGEYNHITKHKETAMQCGIPERNIVLMSDGDQIEVCAKYMKKIKTVKTGKVFIDNQINEQIADDVVIDRQKLADSGLVMLVIQLDKGEHKLICKPKIISYGLVPDKDDKAFSIEMEGVIDQFVLNAKAELLENTRALENEIRQVVRKHIYRQMKKYPTIVPTIFMM
SIO_010081: SJPD1_RS00475
subclass of: SO_0000673
so part of: SJPD1_RS00475
location: 85628..87619
location: region:85628-87619:1
so has part: feature:85628-87619:1:exon

WP_096045484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85628-87619:1:exon

SJPD1_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00480
old locus tag: SJPD1_0097
so part of: sequence
location: 87628..88593
location: region:87628-88593:1
so has part: feature:87628-88593:1:exon
subclass of: SO_0000010

position:87628:1
position: 87628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88593:1
position: 88593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87628-88593:1:exon

SJPD1_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00480
old locus tag: SJPD1_0097
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768298.1
GO function: GO:0016853 - isomerase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KpsF/GutQ family sugar-phosphate isomerase
translation: MQDFKAIAKEVLELEAKELLNAALIVGEEMCEATNLIAGIKGKLIVTGVGKSGLIGAKIAATLASTGTSSFFLHPTEAMHGDLGMVGKEDAVLAISYSGESEELIKILPHIKRFDIPLIGMARSRESSLGHYSDVFLPLHIEKEACPLDAAPTCSTTLTLALGDALAVCLMKKKNFQKEDFASFHPGGSLGKRLFVKVKDLMLTKELPIIHETTKLKEAIIKMSEGRLGNVLITDQNNHLIAILSDGDLRRALMRDDFSMDATAYEYATKNPKKLDDETLLASDALTFIEKYKIQLVAITDKVGVLKGVLHIHDLVEAGIK
SIO_010081: SJPD1_RS00480
subclass of: SO_0000673
so part of: SJPD1_RS00480
location: 87628..88593
location: region:87628-88593:1
so has part: feature:87628-88593:1:exon

WP_096045485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87628-88593:1:exon

SJPD1_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00485
old locus tag: SJPD1_0098
so part of: sequence
location: 88603..89412
location: region:88603-89412:1
so has part: feature:88603-89412:1:exon
subclass of: SO_0000010

position:88603:1
position: 88603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89412:1
position: 89412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88603-89412:1:exon

SJPD1_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00485
old locus tag: SJPD1_0098
EC number: 5.4.99.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013326004.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pseudouridine synthase
translation: MRLNKMISHNTHYSRREADELIKAGHVKVDGVVVQDLSTQVSFKNKIELNGKALFEKHGYSVIVYHKQKGELVSKKDDRGRRTIYDTLPAQFGHYLSVGRLDFASEGLLLLCDSPSVVSALMHGDLERVYYVKINGMITPAMEKAMQEGLFLENARKGGHSHSEIRSMDFAPFVAYRIIKNNPTFSTIKVTINEGKNRELRRFFGYFDVDVVDLKRVSYGKVDLGMLRPGKHRYFDGGEYNALRDYLEYIKKDNGKISVANEDEEDDDQ
SIO_010081: SJPD1_RS00485
subclass of: SO_0000673
so part of: SJPD1_RS00485
location: 88603..89412
location: region:88603-89412:1
so has part: feature:88603-89412:1:exon

WP_226372272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88603-89412:1:exon

SJPD1_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00490
old locus tag: SJPD1_0099
so part of: sequence
location: 89402..90604
location: region:89402-90604:1
so has part: feature:89402-90604:1:exon
subclass of: SO_0000010

position:89402:1
position: 89402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90604:1
position: 90604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89402-90604:1:exon

SJPD1_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00490
old locus tag: SJPD1_0099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication-associated recombination protein A
translation: MINNFALFFRPKVIEELAGQKHLSGESSPFRKLLKSGSMSHSLFFGPAGVGKTTLARIVANELELPFYELDATSVKVDEIRKILSQHRGSLQKPLIFIDEIHRLSKTQQEVLLLPMENHEAIIIGASTENPYFVLSSGIRSRMMLFEFYPLEEDDLRAIIQRVREKIVFEIEDEAIAYLMSSSAGDSRALLNLLEFALKVDLHVTLETLKNLRPSALKDGVSSDNTHYNLISAMIKSVRGSDVDAALYYLARLIDGGESPDFIARRLVILASEDIGNANPNALNLASSTLLSVSKIGYPEARIILSQCLIYLACSPKSNSAYLAINNALEYVKNEKGLKVPAHLKSPSPKGYLYPHDFGGWVEQKYLEKPLHFYDNLSIGYEKTLSEWLVKIKTKDNKQS
SIO_010081: SJPD1_RS00490
subclass of: SO_0000673
so part of: SJPD1_RS00490
location: 89402..90604
location: region:89402-90604:1
so has part: feature:89402-90604:1:exon

WP_096045487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89402-90604:1:exon

SJPD1_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00495
old locus tag: SJPD1_0100
so part of: sequence
location: 90635..92518
location: region:90635-92518:1
so has part: feature:90635-92518:1:exon
subclass of: SO_0000010

position:90635:1
position: 90635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92518:1
position: 92518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90635-92518:1:exon

SJPD1_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00495
old locus tag: SJPD1_0100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768301.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-length control protein FliK
translation: MDISTTSLLANQLQTLDPKAIAKENATKIIQESADIPLSITAQKTTTTPNNAQEVIGQLLGSAVSEAKSKSAIFEILQNNQLFKNMGNFAEDIKNLSSLVKMDSTIAKPLALLQLFSKNIEQIDVKMLQEQIQNSGIFFESKLSNSVTQKGVLDTIQTLTSDLQAHFSQTNTKAVIPLLKEINVIMDHLNSTQDISSKEGQTNLKALLDLFRQSVKQELSSEGTSVFKEVYQNVQKLDYAIKQMDLIASKVENYPLDMKVEENFSTQVKVILEMLKENLSALQLDDLQPQIDQLLTKESFLKETNSVALPSSELLVTPLNVSKDEGALKIPPQPSVIKAEDMGQPIEKRLMGNTVDGIDDPTSSKEVLLKTESTLLSSAVATAVMNSSVTKAPETTEEALKMVVNRIKQQIEILDPKSIQQSDFVDKSTVLEQKIHGLIKPELFVGKAIAQKLSLDPTDVELLSDMKGVLTKLSDNLQTSPQNKEALEITNRLLTQIEYHQLVSYVSSSTHLYVPFSWNGLQGGSMMMKQSSDNNFHCQIDLDLEAYGKLNMMLVLSGEKYIDISIAVQKKELSEKITQQLNNLKQAFNEVGLITGNVKMLEYKDVSTVKNDYFSGEKLQFGINITI
SIO_010081: SJPD1_RS00495
subclass of: SO_0000673
so part of: SJPD1_RS00495
location: 90635..92518
location: region:90635-92518:1
so has part: feature:90635-92518:1:exon

WP_096045488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90635-92518:1:exon

SJPD1_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00500
old locus tag: SJPD1_0101
so part of: sequence
location: 92515..92793
location: region:92515-92793:1
so has part: feature:92515-92793:1:exon
subclass of: SO_0000010

position:92515:1
position: 92515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92793:1
position: 92793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92515-92793:1:exon

SJPD1_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00500
old locus tag: SJPD1_0101
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855872.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscU/YscU/HrcU family type III secretion system export apparatus switch protein
translation: MNTPTPKTQKAVALKYDREKSAAPKVVASGKGEVANNIIKLAQEHDIFIKKDADLVELLSKIEINKEIPPMLYKAVAEVFSFIYKITNDKRK
SIO_010081: SJPD1_RS00500
subclass of: SO_0000673
so part of: SJPD1_RS00500
location: 92515..92793
location: region:92515-92793:1
so has part: feature:92515-92793:1:exon

WP_087437405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92515-92793:1:exon

SJPD1_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00505
old locus tag: SJPD1_0102
so part of: sequence
location: 92823..93110
location: region:92823-93110:1
so has part: feature:92823-93110:1:exon
subclass of: SO_0000010

position:92823:1
position: 92823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93110:1
position: 93110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92823-93110:1:exon

SJPD1_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00505
old locus tag: SJPD1_0102
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: antibiotic biosynthesis monooxygenase
translation: MFAVIFRATVKETDNEYNTMANKLRKLAFETYGCLDFIAVCEGNQEVAISYWESEMAIKMWKENAEHLIAQELGQKRWYSSYSVQIVEVKHEYRF
SIO_010081: SJPD1_RS00505
subclass of: SO_0000673
so part of: SJPD1_RS00505
location: 92823..93110
location: region:92823-93110:1
so has part: feature:92823-93110:1:exon

WP_096045489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92823-93110:1:exon

SJPD1_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00510
old locus tag: SJPD1_0103
so part of: sequence
location: complement(93107..93895)
location: region:93107-93895:-1
so has part: feature:93107-93895:-1:exon
subclass of: SO_0000010

position:93107:-1
position: 93107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93895:-1
position: 93895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93107-93895:-1:exon

SJPD1_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00510
old locus tag: SJPD1_0103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855873.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdcF family protein
translation: MSSVYFLSKLFTYLVLPPGIFIVFFLLASFYAKRFRLFFLVNAIIFYLLSTTYVADWLLTPLEAPFNKPLEKQSSVDAVIVLGGGNTKGVANLPLSTDAYKRMMWGLMIAKSNNLPLLFSGGGTSKEYLESDAFLDSLKELKLYLEIPTPTSKSLNTKEFSLHVEDKSIDTYQNAELSKAAFEKTGLKEPTIYLVTSAYHMRRSIRLYEHFGFKVIPAATNFKINAKIKDEWDYLPNAHAFYKSYVALHEYVGLFSLRFRGI
SIO_010081: SJPD1_RS00510
subclass of: SO_0000673
so part of: SJPD1_RS00510
location: complement(93107..93895)
location: region:93107-93895:-1
so has part: feature:93107-93895:-1:exon

WP_096045490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93107-93895:-1:exon

SJPD1_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: purM
locus tag: SJPD1_RS00515
old locus tag: SJPD1_0104
so part of: sequence
location: complement(93895..94890)
location: region:93895-94890:-1
so has part: feature:93895-94890:-1:exon
subclass of: SO_0000010

position:94890:-1
position: 94890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93895-94890:-1:exon

SJPD1_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: purM
locus tag: SJPD1_RS00515
old locus tag: SJPD1_0104
EC number: 6.3.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855874.1
GO function: GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylformylglycinamidine cyclo-ligase
translation: MSTVSYKDAGVDIDAGNQFVENIKPLVKSTFDKNVIGGIGSFAGAYELPSGYQKPVILGATDGVGTKLKLAIDSSIYDTVGIDLVAMCANDLICNFGTPLFFLDYYAMSKLEIDAAVSIVKGIAEGCIQAECSLIGGETAEMPGMYHSKDFDLAGFAVGIAEKDEMNRLPHVKAGDILIALPSSGVHSNGFSLVRKLFFDKLCYTFDTEFDGKPLIETLLTPTRIYVKLFKALKSKINALAHITGGGIVENLPRVLPEGLQAHVYKSKIKTLPVFDFMSQYVEESEMHRTFNMGVGMILVVSPENVNDVLANSDGYVIGELKVGPKSAVML
SIO_010081: SJPD1_RS00515
subclass of: SO_0000673
so part of: SJPD1_RS00515
location: complement(93895..94890)
location: region:93895-94890:-1
so has part: feature:93895-94890:-1:exon

WP_096045491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93895-94890:-1:exon

SJPD1_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: coaE
locus tag: SJPD1_RS00520
old locus tag: SJPD1_0105
so part of: sequence
location: 94981..95586
location: region:94981-95586:1
so has part: feature:94981-95586:1:exon
subclass of: SO_0000010

position:94981:1
position: 94981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95586:1
position: 95586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94981-95586:1:exon

SJPD1_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: coaE
locus tag: SJPD1_RS00520
old locus tag: SJPD1_0105
EC number: 2.7.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855875.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
note: Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dephospho-CoA kinase
translation: MAYEHAIVLTGGIATGKSTVSSMLKSHGFEVIDADVIAKEVLPLHVKEVETLFGDRVIRDGSIDRKALGALIFNDKKEREKLNAFLHPLIRQEIFKQCDQLEEKKTPYIIDIPLYFESDGYACKLVTVVYAPVEVQRKRLMIREDFSKEEAQKRIDAQISIEEKKILADFLINNSFDMKFLESEIEKFIKFVRGTYANCKI
SIO_010081: SJPD1_RS00520
subclass of: SO_0000673
so part of: SJPD1_RS00520
location: 94981..95586
location: region:94981-95586:1
so has part: feature:94981-95586:1:exon

WP_096045492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94981-95586:1:exon

SJPD1_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: dapF
locus tag: SJPD1_RS00525
old locus tag: SJPD1_0106
so part of: sequence
location: 95567..96310
location: region:95567-96310:1
so has part: feature:95567-96310:1:exon
subclass of: SO_0000010

position:95567:1
position: 95567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96310:1
position: 96310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95567-96310:1:exon

SJPD1_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: dapF
locus tag: SJPD1_RS00525
old locus tag: SJPD1_0106
EC number: 5.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011991658.1
GO function: GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminopimelate epimerase
translation: MQIAKYNANGNDFIIFHTFVEVDRSGLAQQLCDRQKGVGADGLIVLLPHPEYDFKWQFYNNDGSVASMCGNGTRACAHYAFTNQLAGASMRFLTGAGVITSLVENDVVETELTTPQVLSESFDENGLTWHFCDTGVPHLVTFVDDTACFDKVIARQMRYKYNANVNYAMLKENTLHVRTYERGVEDETLACGTGMAACFYSAYRQKLIEASAKVYPISGEELNLRIENQRLFFKGRVQKVFETVLEL
SIO_010081: SJPD1_RS00525
subclass of: SO_0000673
so part of: SJPD1_RS00525
location: 95567..96310
location: region:95567-96310:1
so has part: feature:95567-96310:1:exon

WP_096045493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95567-96310:1:exon

SJPD1_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00530
old locus tag: SJPD1_0107
so part of: sequence
location: 96315..97034
location: region:96315-97034:1
so has part: feature:96315-97034:1:exon
subclass of: SO_0000010

position:96315:1
position: 96315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97034:1
position: 97034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96315-97034:1:exon

SJPD1_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00530
old locus tag: SJPD1_0107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855877.1
GO function: GO:0004040 - amidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucosaminidase domain-containing protein
translation: MKFFSTLFIASCLLFNGALYAGGLSSEYYQIEDGPKQKEEFIRQMKVLVDKGNDEIIKDREFITNFFAKAVPGAFRGLNQQNVGYLISLRNKYGIESLFDRDEYFKRIDVIPTSLALSQAALESGWGKSRFAKEANNLFGHWSYSGVGLMPQNRAIGKTHMIRIFGSLQKSVNSYMLNLNTNDAYITFREKRLQSRNNGKNFGGMEASKTMSNYSELKEEYIKMIKEMIDQNNLLIYDK
SIO_010081: SJPD1_RS00530
subclass of: SO_0000673
so part of: SJPD1_RS00530
location: 96315..97034
location: region:96315-97034:1
so has part: feature:96315-97034:1:exon

WP_096045494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96315-97034:1:exon

SJPD1_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: prfA
locus tag: SJPD1_RS00535
old locus tag: SJPD1_0108
so part of: sequence
location: complement(97042..98109)
location: region:97042-98109:-1
so has part: feature:97042-98109:-1:exon
subclass of: SO_0000010

position:97042:-1
position: 97042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98109:-1
position: 98109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97042-98109:-1:exon

SJPD1_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: prfA
locus tag: SJPD1_RS00535
old locus tag: SJPD1_0108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002888519.1
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 1
translation: MLKDKLLPFLERYNELSTLLSDPNIATDIKKMTALSKEQSGLEKIKDKTLEYLSTLDQIEENKLLFDDEELGELAKDELRILEPRKEEIEEEIKLLLLPTDPNDERNIFLEIRAGTGGDEAAIFVSDLFKSYLRYAENRGWKVEIVSLSEGVLNGYKEVIALIKGQGAFSRLKYEGGVHRVQRVPLTESQGRVHTSAVTVAVMPEVDDVEIEILEKDLKVDVMRSSGNGGQSVNTTDSAVRITHLPTGLVVVNQDGKSQHKNKDAAMKVLKAKLYDMQMQERNAKESEARKTQVGSGDRSARIRTYNYPQNRITDHRVGLTLYRLDAIMEGGFYDEIIDPIITHYQTELMKEANL
SIO_010081: SJPD1_RS00535
subclass of: SO_0000673
so part of: SJPD1_RS00535
location: complement(97042..98109)
location: region:97042-98109:-1
so has part: feature:97042-98109:-1:exon

WP_096045495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97042-98109:-1:exon

SJPD1_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rpsT
locus tag: SJPD1_RS00540
old locus tag: SJPD1_0109
so part of: sequence
location: complement(98146..98421)
location: region:98146-98421:-1
so has part: feature:98146-98421:-1:exon
subclass of: SO_0000010

position:98146:-1
position: 98146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98421:-1
position: 98421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98146-98421:-1:exon

SJPD1_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rpsT
locus tag: SJPD1_RS00540
old locus tag: SJPD1_0109
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855879.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
translation: MANHKSAEKRIRQTKKRTERNRFYKTRIKNLTRAVREAVEAGDQAAAEVALKNVNKNFHSYAGKGILTKNTAARRVSRLSQLVNTLGSVAA
SIO_010081: SJPD1_RS00540
subclass of: SO_0000673
so part of: SJPD1_RS00540
location: complement(98146..98421)
location: region:98146-98421:-1
so has part: feature:98146-98421:-1:exon

WP_025343336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98146-98421:-1:exon

SJPD1_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: glmM
locus tag: SJPD1_RS00545
old locus tag: SJPD1_0110
so part of: sequence
location: 98765..100105
location: region:98765-100105:1
so has part: feature:98765-100105:1:exon
subclass of: SO_0000010

position:98765:1
position: 98765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100105:1
position: 100105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98765-100105:1:exon

SJPD1_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: glmM
locus tag: SJPD1_RS00545
old locus tag: SJPD1_0110
EC number: 5.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002850809.1
GO function: GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglucosamine mutase
translation: MKLFGTDGVRGKAGKKLSAFMAMRLAMAAGIYFRKNSITNKILVGKDTRRSGYMIENAIVSGLTAVGYDVRQIGPMPTPAIAFLTEDMRCDAGIMISASHNPYFDNGIKFFDSFGNKLGETEEAAIEKIYYDDALIEANQKMEFDIGRSKRVDDVIGRYIVQIKNSFPKTLTLKGLRIVLDTANGAAYKVAPTIFNELGADVIMINDEPNGSNINLNCGALHPEELGEEVRRLRADLGFAFDGDADRLVVVDENGNPIHGDKLIGKIATFLQSQNRLTNKGVCVTVMSNQALEDYLNKSGIKTYRCDVGDKNVLETLYREKINFGGEQSGHIILSDFAKTGDALVAALAVMHCMLTEKQKVSKLFSPFELYPQLQQNIKVDNKIPLSELKGYDKLVAELESKKIRVLIRYSGTENLLRILLEGQDEKLLEDRMEKTVKFFKSALNE
SIO_010081: SJPD1_RS00545
subclass of: SO_0000673
so part of: SJPD1_RS00545
location: 98765..100105
location: region:98765-100105:1
so has part: feature:98765-100105:1:exon

WP_096045496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98765-100105:1:exon

SJPD1_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: lspA
locus tag: SJPD1_RS00550
old locus tag: SJPD1_0111
so part of: sequence
location: 100098..100544
location: region:100098-100544:1
so has part: feature:100098-100544:1:exon
subclass of: SO_0000010

position:100098:1
position: 100098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100544:1
position: 100544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100098-100544:1:exon

SJPD1_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: lspA
locus tag: SJPD1_RS00550
old locus tag: SJPD1_0111
EC number: 3.4.23.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855883.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MNKRWIVFVTSLCCIFFVDQLIKTFFLEGFRWEGSFFSLILTYNKGVAFSMFAFLEEYLKYIQLLLVGGLGIYLLFYKDILRNYSFSIGIISGAALSNIYDRFIHGGVVDYFFWHYGFEFAVFNFADVMIDFGVILILYYSWKSKKEG
SIO_010081: SJPD1_RS00550
subclass of: SO_0000673
so part of: SJPD1_RS00550
location: 100098..100544
location: region:100098-100544:1
so has part: feature:100098-100544:1:exon

WP_096045497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100098-100544:1:exon

SJPD1_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00555
old locus tag: SJPD1_0112
so part of: sequence
location: 100626..100701
location: region:100626-100701:1
so has part: feature:100626-100701:1:exon
subclass of: SO_0000663

position:100626:1
position: 100626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100701:1
position: 100701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100626-100701:1:exon

SJPD1_RS00555
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS00555
old locus tag: SJPD1_0112
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:100659..100661,aa:Val,seq:gac)
SIO_010081: SJPD1_RS00555
subclass of: SO_0000673
so part of: SJPD1_RS00555
location: 100626..100701
location: region:100626-100701:1
so has part: feature:100626-100701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100626-100701:1:exon

SJPD1_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: thrS
locus tag: SJPD1_RS00560
old locus tag: SJPD1_0113
so part of: sequence
location: 100755..102572
location: region:100755-102572:1
so has part: feature:100755-102572:1:exon
subclass of: SO_0000010

position:100755:1
position: 100755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102572:1
position: 102572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100755-102572:1:exon

SJPD1_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: thrS
locus tag: SJPD1_RS00560
old locus tag: SJPD1_0113
EC number: 6.1.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002781865.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine--tRNA ligase
translation: MMNDVIAYKEGALVIDTQTAAASSKTYEDKILFDNSKDALEIIRHSCAHLMAQAIKALYKDAQFFVGPVIEDGFYYDFRVNEKIGDADLKEIEKKMAELATAKLPIEKIYTTKAAVIKRFEHDNLKQEVLLRIPDGEVSIYKQGDFEDLCRGPHVPNTKYLRFFKLIKVAGAYLGGDEKREMLTRIYGIAFADKESLKDYITMIEEAKKRDHRKIGNELKLFTFDDEVGAGLPIWLPNGGKLRSKLEQLLFKAHRKRGYLPVRGPELLKSDAWKISGHYQNYGENMYFTVIDESEYGIKPMNCLGHIKVFQSEVRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCTPDQIKENVIEILSFVDSIMKTFGFKYEMEISTRPEKSIGDEKYWEAATEGLKNALDENGIHYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDISYIDANNEHARPVMLHRAILGSFERFIGILIEHTSGEFPFFLAPTQAVIIPISDAHLAYAKTLANELMAEEIDVEVSSKNESLNKRIRNAETMRVPMILVIGDAEVEGQSVAVRDRRERTQYNLTKEALISKMKEKLSEVHF
SIO_010081: SJPD1_RS00560
subclass of: SO_0000673
so part of: SJPD1_RS00560
location: 100755..102572
location: region:100755-102572:1
so has part: feature:100755-102572:1:exon

WP_096045498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100755-102572:1:exon

SJPD1_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: infC
locus tag: SJPD1_RS00565
old locus tag: SJPD1_0114
so part of: sequence
location: 102569..103084
location: region:102569-103084:1
so has part: feature:102569-103084:1:exon
subclass of: SO_0000010

position:102569:1
position: 102569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103084:1
position: 103084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102569-103084:1:exon

SJPD1_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: infC
locus tag: SJPD1_RS00565
old locus tag: SJPD1_0114
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768315.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-3
translation: MSKDKDVILNDEIRAAEVRCVGDDGTQYGIITRKEALAKADELGLDLVLIAPDAKPPVCKIMNYGKFKYQQEKKLKEARKNQKIIEIKEIKLSVKIAANDVNYKIKHAREFLEEGKHVRFRVFLKGREMSNPEIGEQVLESLWPMLEDIAEREKTPKLEGRYINMLVTPKK
SIO_010081: SJPD1_RS00565
subclass of: SO_0000673
so part of: SJPD1_RS00565
location: 102569..103084
location: region:102569-103084:1
so has part: feature:102569-103084:1:exon

WP_088437167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102569-103084:1:exon

SJPD1_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rpmI
locus tag: SJPD1_RS00570
old locus tag: SJPD1_0115
so part of: sequence
location: 103213..103407
location: region:103213-103407:1
so has part: feature:103213-103407:1:exon
subclass of: SO_0000010

position:103213:1
position: 103213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103407:1
position: 103407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103213-103407:1:exon

SJPD1_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rpmI
locus tag: SJPD1_RS00570
old locus tag: SJPD1_0115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855887.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L35
translation: MPKMKTVRGAAKRFRVGKSKIKRGAAFRSHILTKKPTKRMRGLKESKVVDARDEKSIKLMLCKA
SIO_010081: SJPD1_RS00570
subclass of: SO_0000673
so part of: SJPD1_RS00570
location: 103213..103407
location: region:103213-103407:1
so has part: feature:103213-103407:1:exon

WP_087437414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103213-103407:1:exon

SJPD1_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rplT
locus tag: SJPD1_RS00575
old locus tag: SJPD1_0116
so part of: sequence
location: 103523..103876
location: region:103523-103876:1
so has part: feature:103523-103876:1:exon
subclass of: SO_0000010

position:103523:1
position: 103523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103876:1
position: 103876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103523-103876:1:exon

SJPD1_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rplT
locus tag: SJPD1_RS00575
old locus tag: SJPD1_0116
inference: COORDINATES: similar to AA sequence:RefSeq:YP_002343687.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L20
translation: MARVKTGIVRRRRHKKILKMARGFFSGRRKHFRKAKEQIERSLVYAFRDRRQKKRDFRRLWITRINAACRLNDISYSRFINALNKANIDLDRKILADMAMNDPEAFATVVKQAKSAL
SIO_010081: SJPD1_RS00575
subclass of: SO_0000673
so part of: SJPD1_RS00575
location: 103523..103876
location: region:103523-103876:1
so has part: feature:103523-103876:1:exon

WP_087437415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103523-103876:1:exon

SJPD1_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: ccoG
locus tag: SJPD1_RS00580
old locus tag: SJPD1_0117
so part of: sequence
location: complement(104044..105411)
location: region:104044-105411:-1
so has part: feature:104044-105411:-1:exon
subclass of: SO_0000010

position:104044:-1
position: 104044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105411:-1
position: 105411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104044-105411:-1:exon

SJPD1_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: ccoG
locus tag: SJPD1_RS00580
old locus tag: SJPD1_0117
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768340.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase accessory protein CcoG
translation: MNCSNDCSTQPTYYRLKRYMSFGIITFISLVLPFITIEGKHFFLLSFDKKQLNLFFTAFDMQELYLMPFVIMLFFLGIFFITTLGGRVWCGWSCPQTIFRVIFRDLIQTKLLGIRKNIHNKQKEPENQIVKRFIAIIIWACLALLAASNFLWYFIPPEDFFVYLQHPLDNTIMYGFLIGITTFLIYDVVALKENFCVYICPYARIQSALFDENTIQTIYDVKRGGQIYDAKGMKLSSKPPLATDDCTGCEACVRVCPTHIDIRKGMQLECINCLECADACTPVMEKLGKPSLITWTSYNATEKGVKTQYFRFRTIAYMVALSIALIGLFAMGTQKEYMLLNINRTSQLYKMADDGKTVENVYTFLFQNTDTKDHTYYFEISNKDIKIDKPSEPFLLKAGEKMKKVVILNAAPKELREEGEDLPITIKAYAVDAKEKIIVNRHTIFIYPKRSDVQP
SIO_010081: SJPD1_RS00580
subclass of: SO_0000673
so part of: SJPD1_RS00580
location: complement(104044..105411)
location: region:104044-105411:-1
so has part: feature:104044-105411:-1:exon

WP_096045499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104044-105411:-1:exon

SJPD1_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00585
old locus tag: SJPD1_0118
so part of: sequence
location: complement(105401..106096)
location: region:105401-106096:-1
so has part: feature:105401-106096:-1:exon
subclass of: SO_0000010

position:105401:-1
position: 105401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106096:-1
position: 106096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105401-106096:-1:exon

SJPD1_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00585
old locus tag: SJPD1_0118
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768339.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MNIVLLKARSNDSSMVVQQKQILKYAHHHDLEINTTEIENSDPALELEERKEFKGFLRSLSKNDHILIFDLLTFSNNVEELVKIFECLLTRSISIHIADVNTCIHVDSKPLILLDLLVKQRELNKQLDKEKTQGRPKGRMSKSKFDVHRPYVIELLEKNTSISEISKILNVSRTSLKDYVNSRGLKELVKAKFSLLKSSKQQPLTLKSSVAKECSLIKPPVDYTEGTVHEL
SIO_010081: SJPD1_RS00585
subclass of: SO_0000673
so part of: SJPD1_RS00585
location: complement(105401..106096)
location: region:105401-106096:-1
so has part: feature:105401-106096:-1:exon

WP_096045500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105401-106096:-1:exon

SJPD1_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rpsU
locus tag: SJPD1_RS00590
old locus tag: SJPD1_0119
so part of: sequence
location: 106298..106510
location: region:106298-106510:1
so has part: feature:106298-106510:1:exon
subclass of: SO_0000010

position:106298:1
position: 106298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106510:1
position: 106510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106298-106510:1:exon

SJPD1_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rpsU
locus tag: SJPD1_RS00590
old locus tag: SJPD1_0119
inference: COORDINATES: similar to AA sequence:RefSeq:YP_002343807.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MPGIKVHPNDSFDEAYRKFKKQVDRNLVVTEVRARRFYETATEKRKKDKISARKKQLKRLYMLRRYESRL
SIO_010081: SJPD1_RS00590
subclass of: SO_0000673
so part of: SJPD1_RS00590
location: 106298..106510
location: region:106298-106510:1
so has part: feature:106298-106510:1:exon

WP_025343347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106298-106510:1:exon

SJPD1_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00595
old locus tag: SJPD1_0120
so part of: sequence
location: 106644..107357
location: region:106644-107357:1
so has part: feature:106644-107357:1:exon
subclass of: SO_0000010

position:106644:1
position: 106644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107357:1
position: 107357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106644-107357:1:exon

SJPD1_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00595
old locus tag: SJPD1_0120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768338.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MDKKLTVIEAAKLLGVSKEAIYNRLRRGSLQSIIENGVKYILLTKSSLKEGPSIRKIDNVAENAYVELLKVQLEEMKLKNEKLEADKERLIADKERLLIESKEKIEMIYKERDEQLKAILTLANRQITHTGNEASTNTPTTIVPSSATTASQTPFSFEEADVLDEDEENRVVEDMFESYSDWRDLRSYLKEKGFSKKEKQHISDKIGKKIGQLNDVMDKNGKLFIKKGKKLKEILGE
SIO_010081: SJPD1_RS00595
subclass of: SO_0000673
so part of: SJPD1_RS00595
location: 106644..107357
location: region:106644-107357:1
so has part: feature:106644-107357:1:exon

WP_096045501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106644-107357:1:exon

SJPD1_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00600
old locus tag: SJPD1_0121
so part of: sequence
location: 107363..107992
location: region:107363-107992:1
so has part: feature:107363-107992:1:exon
subclass of: SO_0000010

position:107363:1
position: 107363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107992:1
position: 107992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107363-107992:1:exon

SJPD1_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00600
old locus tag: SJPD1_0121
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UPF0323 family lipoprotein
translation: MQYIRKISDYMIAGGIGVMVLVSMQGCDQKDENKNALADAAKTQGALVIVDESATGEYKIAEEYPSSTTRVIVRKPDGSERILSQAEIDALVKEEAKKIDNNTSPLTNSSMNSGQMGLGGILLSSIAGGMIGSWIGGKLFNNPTYQNQRATNYSSPQAYSRSTTSFNKPMSTSSTSSTTKSSGFFGSSSGSGSSSSSTSSSSVPSSSGS
SIO_010081: SJPD1_RS00600
subclass of: SO_0000673
so part of: SJPD1_RS00600
location: 107363..107992
location: region:107363-107992:1
so has part: feature:107363-107992:1:exon

WP_096045502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107363-107992:1:exon

SJPD1_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00605
old locus tag: SJPD1_0122
so part of: sequence
location: 107995..109176
location: region:107995-109176:1
so has part: feature:107995-109176:1:exon
subclass of: SO_0000010

position:107995:1
position: 107995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109176:1
position: 109176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107995-109176:1:exon

SJPD1_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00605
old locus tag: SJPD1_0122
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009294992.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathionylspermidine synthase family protein
translation: MLHVEKIKPLSKEFLESIGFYWHTDADQTSYVVDELVLVSTAEVEAYYEAANTLYDMFVEAGQYVIDNNLFHELNIPFNLVELIKNSWANDVHWHLYGRFDFAGGIDGKPIKLIEFNADTPTSLYETAIIQWAMLKANGMDEAKQFNTVFEALKENFKRLVVLGGNTEDFAEYYDGWKILFSSIRGNIEDENTTRLLQTAANEAGFHTDFAYIDEVGFNGSEGIFKGDENFEFWFKLVPWENIAIEEGDLALLLDEIVREQKAIILNPAYTLLFQSKAFMKILWDLFPNHPLLLETSYEPLKGKKQVEKRAFGREGANTIIYDTDMSVMAKVEGDYGNFKPIYQAYVELPKDVEGESYQAGVFFAYEACGLGFRRGGLIMENFSKFVGHRIKD
SIO_010081: SJPD1_RS00605
subclass of: SO_0000673
so part of: SJPD1_RS00605
location: 107995..109176
location: region:107995-109176:1
so has part: feature:107995-109176:1:exon

WP_096047759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107995-109176:1:exon

SJPD1_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00610
old locus tag: SJPD1_0123
so part of: sequence
location: 109180..110112
location: region:109180-110112:1
so has part: feature:109180-110112:1:exon
subclass of: SO_0000010

position:109180:1
position: 109180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110112:1
position: 110112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109180-110112:1:exon

SJPD1_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00610
old locus tag: SJPD1_0123
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768244.1
GO function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-2-hydroxyacid dehydrogenase
translation: MKIVFLDASTMGNDIDLSLFEQFGVFETFAMTEMFERVEHIGDAEIILTNKVIIDSVVMDACPGLKLICITATGTNNVDLDYAKQKGIVVKNVAGYSTASVAQTTIMLVLNLLSQCEYYDQYVKSGEWTKISIFTHIDRPFWEIKGKRWGIIGLGTIGKEVAKIATAFGAQVVYFSASGGHYETPYTQISLEEMMQTCDVISIHAPLNDKTKNLIAKEQFHQMKKGAILVNVGRGGIVNEDDLREVIDTKEIYVGLDVLAIEPMIEDHPLLHVKHPERLIITPHIAWGSIEARRELMRLVGENIKEYLRH
SIO_010081: SJPD1_RS00610
subclass of: SO_0000673
so part of: SJPD1_RS00610
location: 109180..110112
location: region:109180-110112:1
so has part: feature:109180-110112:1:exon

WP_096045503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109180-110112:1:exon

SJPD1_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00615
old locus tag: SJPD1_0124
so part of: sequence
location: 110122..110622
location: region:110122-110622:1
so has part: feature:110122-110622:1:exon
subclass of: SO_0000010

position:110122:1
position: 110122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110622:1
position: 110622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110122-110622:1:exon

SJPD1_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00615
old locus tag: SJPD1_0124
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014468490.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YajQ family cyclic di-GMP-binding protein
translation: MAAKEHSFDITAEIDKQKFKDAYEQAKKVITNRWDFKGITCEFEHNEKAKTVTLVTTTDSKADAMVEALISEAIKREISSKALKETKREVAGGNKTKVTVSIVDAISSDDAKKIVKEIKDLKLKVQASIRGDVVRVEGKAIDDLQEAIKAIRGCDFDFPVNFTNLK
SIO_010081: SJPD1_RS00615
subclass of: SO_0000673
so part of: SJPD1_RS00615
location: 110122..110622
location: region:110122-110622:1
so has part: feature:110122-110622:1:exon

WP_096045504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110122-110622:1:exon

SJPD1_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00625
old locus tag: SJPD1_0126
so part of: sequence
location: 110973..112562
location: region:110973-112562:1
so has part: feature:110973-112562:1:exon
subclass of: SO_0000010

position:110973:1
position: 110973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112562:1
position: 112562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110973-112562:1:exon

SJPD1_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00625
old locus tag: SJPD1_0126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013327076.1
GO function: GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoethanolamine--lipid A transferase
translation: MKFKITRNQLIVVVALFLVLFDNISFFKHVTQVYDVSIANSGFLLSLGVVLVAIITVLLSLFASRYTLKPVAIAFLLIASLTNYFMNTYNVILDDTMIQNAMETNANESLDLINWNLLGYFFFLGIIPSFLIYRVPILHGSFKQEAWNKAKSIGIALVLIAVMLFAFNRFYTSFFRENKPLRYYTNPTYCLYSVGSYMYNSFYKKEATLKQIGLDATKEEGATRKLTIVVVGEAARANRFSLNGYERQTNPLLQKEDIINFSNVYSCGTSTAISVPCMFSNLGRQNYSDKEAKSTENVIDVLKHSGVNVLWRDNNSDSKGVALRVEYQDYKISQNNTLCEDECRDEGMLVGLQKYVDAQKGDIVIVLHQMGNHGPAYYKRYPKAFEKFTPVCQTNQVEKCSAEEIGNAYDNAILYTDYFLSKTIAFLKQNDQNFQTSMIYMADHGESLGEKGLYLHGIPYFMAPEEQTHIGALMWFGSQSKERIDIASLEQRSSQEYSHDNLFHTILGVMGVKTALYDRTKDILTYKHQ
SIO_010081: SJPD1_RS00625
subclass of: SO_0000673
so part of: SJPD1_RS00625
location: 110973..112562
location: region:110973-112562:1
so has part: feature:110973-112562:1:exon

WP_096045506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110973-112562:1:exon

SJPD1_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00630
old locus tag: SJPD1_0127
so part of: sequence
location: 112572..112934
location: region:112572-112934:1
so has part: feature:112572-112934:1:exon
subclass of: SO_0000010

position:112572:1
position: 112572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112934:1
position: 112934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112572-112934:1:exon

SJPD1_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00630
old locus tag: SJPD1_0127
EC number: 2.7.1.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855898.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diacylglycerol kinase
translation: MRNQPKYHFFKNTTYALKGLKDMIANETSFKIELGLVVILLPVLYLLPLDLLSKLVMFIALMGIPMAEAINSAIERVTDLVTLEYHEMAGRAKDAGSSVVFLSIVIFVVVWGFSLINFYM
SIO_010081: SJPD1_RS00630
subclass of: SO_0000673
so part of: SJPD1_RS00630
location: 112572..112934
location: region:112572-112934:1
so has part: feature:112572-112934:1:exon

WP_096045507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112572-112934:1:exon

SJPD1_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00635
old locus tag: SJPD1_0128
so part of: sequence
location: complement(112982..114172)
location: region:112982-114172:-1
so has part: feature:112982-114172:-1:exon
subclass of: SO_0000010

position:112982:-1
position: 112982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114172:-1
position: 114172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112982-114172:-1:exon

SJPD1_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00635
old locus tag: SJPD1_0128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDIGLVLNTLRDPAGVPFYPIVFQALYILTWALHIAFVLLALGSIPLALIGSAKKAVDENWKILSSHMTQVAKISVSLLIVLGVAPLLFTQVIYDANWYVTNTISGLWVVAFIYILILAYSLWYWFYYANRDNSPMAGIIGIVSFVAFIGAGVLMHAFANESIQPEQWMNWYAPNGVVDTSGTVLHIDILRLAFMVSLSAPVTGIFLLNYVDYTSKCDGYTAEYLAFVKNLGKKIAIVGLLVSAVLFAAWILTLHMLLNPLVLAIVLFVLILLFMVIKESNSYITTLVLVVTALLISTLREVIRMNIMSKYGYSIYDYPMNIDWPTVIMFLSTFVCVGFTGVGFMLTLAWRAGRTKGLYTADGTVTKLANATVGITIIWALVFLAWGLVVVFKNTL
SIO_010081: SJPD1_RS00635
subclass of: SO_0000673
so part of: SJPD1_RS00635
location: complement(112982..114172)
location: region:112982-114172:-1
so has part: feature:112982-114172:-1:exon

WP_096045508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112982-114172:-1:exon

SJPD1_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00640
old locus tag: SJPD1_0129
so part of: sequence
location: complement(114186..115520)
location: region:114186-115520:-1
so has part: feature:114186-115520:-1:exon
subclass of: SO_0000010

position:114186:-1
position: 114186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115520:-1
position: 115520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114186-115520:-1:exon

SJPD1_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00640
old locus tag: SJPD1_0129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011138662.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome C
translation: MEYIGLYPLFYFPQIGSAWLMGITGSIHIMASHTSVGAALLFAFLAHKAYKEDRPELYDYMKKYGMFLVIFSYVIGSITGPGIWYTATAASPRGISALIHNFVWVWATEWVFFIVEVIGVFTLIYTIGKIDRKTHLKLTYMFALASVSTLFLIIGIISFMMWPGTEAWYQTGSASDAFFGINTFPHMFLRIGFMIVMSAIIGFIISSNLKEKELRIELTRKLAVIGMIGGFTVMMSFLWYIQTLPQSAWDLFHDVLWARDGMTRIIVVSIIALYLILAFALPRSINTVLAVVMMLVIGVIGVWPGEKMRESMRKPYVAGRYIYSNQLIARDVPGKHVKSEMALVAEKGLLKLDPFVPDHLRTITPENQLEAGKLIAKIACSNCHSLEKGAKFRPLPDRFPQMDAATIETILTDVVAAGVRSYIPPIKLPTDETKALAAWLATQN
SIO_010081: SJPD1_RS00640
subclass of: SO_0000673
so part of: SJPD1_RS00640
location: complement(114186..115520)
location: region:114186-115520:-1
so has part: feature:114186-115520:-1:exon

WP_096045509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114186-115520:-1:exon

SJPD1_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00645
old locus tag: SJPD1_0130
so part of: sequence
location: complement(115961..116257)
location: region:115961-116257:-1
so has part: feature:115961-116257:-1:exon
subclass of: SO_0000010

position:115961:-1
position: 115961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116257:-1
position: 116257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115961-116257:-1:exon

SJPD1_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00645
old locus tag: SJPD1_0130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012857582.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome
translation: MKKILFLAGLVCATSIFAADGETLFKTCATCHGSKAEKSALNKSQIIAGWDAAKITAALDGYKAGTYGGVLKGTMTAQVKNLSADDVKALATYISSIK
SIO_010081: SJPD1_RS00645
subclass of: SO_0000673
so part of: SJPD1_RS00645
location: complement(115961..116257)
location: region:115961-116257:-1
so has part: feature:115961-116257:-1:exon

WP_096045510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115961-116257:-1:exon

SJPD1_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00650
old locus tag: SJPD1_0131
so part of: sequence
location: complement(116330..116665)
location: region:116330-116665:-1
so has part: feature:116330-116665:-1:exon
subclass of: SO_0000010

position:116330:-1
position: 116330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116665:-1
position: 116665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116330-116665:-1:exon

SJPD1_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00650
old locus tag: SJPD1_0131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768331.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKKIVILMIIASFIWAKTGVYEKNCIPCHEDMAIKIDKFFYRYLLKYSSEMEVKHAMSKYLKNPKAENSILVDGLINRFGVKKKTTLSDEQLQEALDTYWNQYKIFDKLK
SIO_010081: SJPD1_RS00650
subclass of: SO_0000673
so part of: SJPD1_RS00650
location: complement(116330..116665)
location: region:116330-116665:-1
so has part: feature:116330-116665:-1:exon

WP_096045511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116330-116665:-1:exon

SJPD1_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00655
old locus tag: SJPD1_0132
so part of: sequence
location: complement(116659..117846)
location: region:116659-117846:-1
so has part: feature:116659-117846:-1:exon
subclass of: SO_0000010

position:116659:-1
position: 116659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117846:-1
position: 117846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116659-117846:-1:exon

SJPD1_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00655
old locus tag: SJPD1_0132
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855900.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MLALKNWDINLRSREKKTLRSFLFLYAFLALLILGFVAFLYYGLERDLMLQNQREALSNLTNEHIARLKSLHVNLGKEQTYPRDERFNSAIYDSSLKQIFSTLSTNKVNLYEDIYLKKNHIYFVKELESYYLGARYIVIEIDAPLSWEKKVFRKLLTYGAIIFGILIVIGYFLLALLLRPMRDTITLLDRFIKDTTHELNTPVNTILSNIEMIELTALDESLAKKIKRITIASKTISNLYDDLTYLVLSHHIISHDEEVDLKVIIEERLEYFSLLIESKKLTLTSTLEENIFLMIDRKKIAKLIDNILSNAIKYNKIGGTIHVLLTPKQIEISDSGRGIETKKINQAFERYVRFDHTVGGFGIGLSIVAAIAKEYTLHVSIDSKLHEGTAVRIAW
SIO_010081: SJPD1_RS00655
subclass of: SO_0000673
so part of: SJPD1_RS00655
location: complement(116659..117846)
location: region:116659-117846:-1
so has part: feature:116659-117846:-1:exon

WP_096045512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116659-117846:-1:exon

SJPD1_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00660
old locus tag: SJPD1_0133
so part of: sequence
location: complement(117803..118477)
location: region:117803-118477:-1
so has part: feature:117803-118477:-1:exon
subclass of: SO_0000010

position:117803:-1
position: 117803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118477:-1
position: 118477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117803-118477:-1:exon

SJPD1_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00660
old locus tag: SJPD1_0133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768329.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MPKTRLLLLEDDTNLSETVCEFLESKGYHVTPVYDGEAAEELIYEHQYDLFLLDVNVPSLNGFQLLKRVRRENNTTPAIFLTSLNAIEDLEHGYESGCDDYLRKPFVLKELLFRIETILKREFFHTQSPKICIDEGIEYDPLNNQLLVNHKVVQLQNKEAKLLKLFLQKKNEIISHEMIMAHLWEYDEQGSDDTLRTYIKNLRKIMGKDRIVSIKKLGYKFTLA
SIO_010081: SJPD1_RS00660
subclass of: SO_0000673
so part of: SJPD1_RS00660
location: complement(117803..118477)
location: region:117803-118477:-1
so has part: feature:117803-118477:-1:exon

WP_096045513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117803-118477:-1:exon

SJPD1_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00665
old locus tag: SJPD1_0134
so part of: sequence
location: complement(118464..118691)
location: region:118464-118691:-1
so has part: feature:118464-118691:-1:exon
subclass of: SO_0000010

position:118464:-1
position: 118464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118691:-1
position: 118691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118464-118691:-1:exon

SJPD1_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00665
old locus tag: SJPD1_0134
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768328.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1104 domain-containing protein
translation: MKKVLFGCLILMSFLFAKTDFSEMSTEELIALIGYVDQKAEEHFYQELDKRVTTMSEEEKALYDEDKKRRDNAQN
SIO_010081: SJPD1_RS00665
subclass of: SO_0000673
so part of: SJPD1_RS00665
location: complement(118464..118691)
location: region:118464-118691:-1
so has part: feature:118464-118691:-1:exon

WP_096045514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118464-118691:-1:exon

SJPD1_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00670
old locus tag: SJPD1_0135
so part of: sequence
location: complement(118695..119291)
location: region:118695-119291:-1
so has part: feature:118695-119291:-1:exon
subclass of: SO_0000010

position:118695:-1
position: 118695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119291:-1
position: 119291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118695-119291:-1:exon

SJPD1_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00670
old locus tag: SJPD1_0135
inference: COORDINATES: protein motif:HMM:NF015823.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC-type transport auxiliary lipoprotein family protein
translation: MKNVLLTLTTLVLLSGCSIKETSQRPYNYSLEPMMKLERFSVANQDVLKVAYIDAPSGLNSRAIVYKKEGAMLPYKYGVWSETPPLKLQYLITEALQDQHHFGSVISGTSMASNNLVLEPVIQNFEEVFREDGTSYVHVSIRFRLVEIKTGEVLGSTKLSSKRDVTNTHGAEGAVEAFNTATEDVIKSLSIWINELRK
SIO_010081: SJPD1_RS00670
subclass of: SO_0000673
so part of: SJPD1_RS00670
location: complement(118695..119291)
location: region:118695-119291:-1
so has part: feature:118695-119291:-1:exon

WP_096045515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118695-119291:-1:exon

SJPD1_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00675
old locus tag: SJPD1_0136
so part of: sequence
location: complement(119302..120255)
location: region:119302-120255:-1
so has part: feature:119302-120255:-1:exon
subclass of: SO_0000010

position:119302:-1
position: 119302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120255:-1
position: 120255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119302-120255:-1:exon

SJPD1_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00675
old locus tag: SJPD1_0136
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855904.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MlaD family protein
translation: MENKLSYILVGAFIFVLLIGGVFSILWLGNYSDKGNFKFYKIATKESVSGLNEKAPVKLQGVQIGEVRGITINPYNAEEVLVTVRVQDNAPIKEDTYAVIEAQGITGLSYIQLQGGTNDAKSLKTSNKDEEYGIIYSRPSTFSRLDKTITSLSTKAEMIFERAESIMSEKNVKNLEIIIANSAKIAESTSKTMANIEAQNKEINLLLKEATNAATGIKNMSYSLTSAVDNTGIDMMNNVRDAAQSVKVVMGGLNQKVEKGSFDVDILLKENLMPLQKTLQDLQVLVNETKDLVSNLKDSPSDILFKEETIQPAPNER
SIO_010081: SJPD1_RS00675
subclass of: SO_0000673
so part of: SJPD1_RS00675
location: complement(119302..120255)
location: region:119302-120255:-1
so has part: feature:119302-120255:-1:exon

WP_096045516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119302-120255:-1:exon

SJPD1_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00680
old locus tag: SJPD1_0137
so part of: sequence
location: complement(120263..120985)
location: region:120263-120985:-1
so has part: feature:120263-120985:-1:exon
subclass of: SO_0000010

position:120263:-1
position: 120263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120985:-1
position: 120985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120263-120985:-1:exon

SJPD1_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00680
old locus tag: SJPD1_0137
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855905.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MIIEAKEIVTSFGDNVIHDGVNFKIQKGEIFGLLGGSGSGKTTLLREMIMLQKAHSGEMIVLGTNVLTASQKTAQKLRQRWGVLFQFGALFTSLTILENVAIAMKEYTQVPDWLIEEASLMKLSVVGLPPKVANMYPSELSGGMKKRAGLARSLALDPKLLFLDEPTSGLDPQSARAFDELIVTLRDTLGVTVVMVTHDKDTMANVLDRFIILGNKKVQFEGTMELLKQTTDEELKKFLS
SIO_010081: SJPD1_RS00680
subclass of: SO_0000673
so part of: SJPD1_RS00680
location: complement(120263..120985)
location: region:120263-120985:-1
so has part: feature:120263-120985:-1:exon

WP_226372273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120263-120985:-1:exon

SJPD1_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00685
old locus tag: SJPD1_0138
so part of: sequence
location: complement(120994..122124)
location: region:120994-122124:-1
so has part: feature:120994-122124:-1:exon
subclass of: SO_0000010

position:120994:-1
position: 120994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122124:-1
position: 122124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120994-122124:-1:exon

SJPD1_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00685
old locus tag: SJPD1_0138
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855906.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MKREPSLQITQNDDHFSVALQGVWVKESIQKLELALNTLTCKPKATYTFDLAGIKDFDTYGIMLILHHVKQLEAQDCTVEKIGASTSLEKLLSVCEMHYPKEKIQEPKEIFILSYLENVGRLAFEGYKTLATFFSFTGELAHFVLAAFLKPQTIRLKAMLYHVEQSGAGALPIILLTSFLIGIVIAYQGATQLEKFGANIFIVEMVTISAVRELAPLLTAIVIAGRSASAYAAQIGVMKITDEVDAMSSMGFSPWNFLVLPRLFALIISLPLLVFFADIVSVFGGMVIATTKLDVSFVEFIDRIKATVALKHLIIGLIKAPIFGCIIATIGCFRGFQIDSSTESVGKYTTISVVNAIFWVIAMDAIISVLLTELGL
SIO_010081: SJPD1_RS00685
subclass of: SO_0000673
so part of: SJPD1_RS00685
location: complement(120994..122124)
location: region:120994-122124:-1
so has part: feature:120994-122124:-1:exon

WP_096045518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120994-122124:-1:exon

SJPD1_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: msrA
locus tag: SJPD1_RS00690
old locus tag: SJPD1_0139
so part of: sequence
location: 122305..122832
location: region:122305-122832:1
so has part: feature:122305-122832:1:exon
subclass of: SO_0000010

position:122305:1
position: 122305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122832:1
position: 122832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122305-122832:1:exon

SJPD1_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: msrA
locus tag: SJPD1_RS00690
old locus tag: SJPD1_0139
EC number: 1.8.4.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014769269.1
GO function: GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO process: GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide-methionine (S)-S-oxide reductase MsrA
translation: MKTEVATLGGGCFWCLEAVFEETRGVVDVVNGYAGGDVKAPSYEQVSRGTTGHAEVVQITFDPAIISYEALLKIFWLIHDPTSLNRQGNDAGTQYRSVIFYHDVNQKEKAEASIKEFSSKFTKPIVTEIKPLETFYKAEAYHQDYFKNNPNQGYCMFVVSPKVAHFKHEYQDLVK
SIO_010081: SJPD1_RS00690
subclass of: SO_0000673
so part of: SJPD1_RS00690
location: 122305..122832
location: region:122305-122832:1
so has part: feature:122305-122832:1:exon

WP_096047760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122305-122832:1:exon

SJPD1_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00695
old locus tag: SJPD1_0140
so part of: sequence
location: 122919..123317
location: region:122919-123317:1
so has part: feature:122919-123317:1:exon
subclass of: SO_0000010

position:122919:1
position: 122919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123317:1
position: 123317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122919-123317:1:exon

SJPD1_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00695
old locus tag: SJPD1_0140
EC number: 3.1.2.-
inference: COORDINATES: protein motif:HMM:TIGR00369.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PaaI family thioesterase
translation: MQALQQFFEANDRFAKLLGFQIEEFNVGVAKVSAIIKAEHLNAANVVHGGFLFSLADYAFALASNSHNKLSLAISANIMFQHAKPNGKLYAYAKELSIGNKVATYEVRISDENDSVIATYTGTVYRKDSNVI
SIO_010081: SJPD1_RS00695
subclass of: SO_0000673
so part of: SJPD1_RS00695
location: 122919..123317
location: region:122919-123317:1
so has part: feature:122919-123317:1:exon

WP_096045519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122919-123317:1:exon

SJPD1_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00700
old locus tag: SJPD1_0141
so part of: sequence
location: complement(123333..123938)
location: region:123333-123938:-1
so has part: feature:123333-123938:-1:exon
subclass of: SO_0000010

position:123333:-1
position: 123333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123938:-1
position: 123938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123333-123938:-1:exon

SJPD1_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00700
old locus tag: SJPD1_0141
inference: COORDINATES: protein motif:HMM:NF008010.0
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhgN family NAAT transporter
translation: MNAEFSIVSTAILLMFVIDPFGAVPIILSILKDVDIKRRRRIIIREMIFGLAILTLFLFGGELFLNIFHLETESVRIAGAVIFFVIGIKMIFPGEEGSSGLYGSSKEPFMVPIAMPLIAGPSTLATLLVLGKSHADATGKLFGALLLAWLVSALIMYLSPLLYKLLREKGLSALERLMGMLLLMMSVQMFIDGIRGLIHTF
SIO_010081: SJPD1_RS00700
subclass of: SO_0000673
so part of: SJPD1_RS00700
location: complement(123333..123938)
location: region:123333-123938:-1
so has part: feature:123333-123938:-1:exon

WP_096045520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123333-123938:-1:exon

SJPD1_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00705
old locus tag: SJPD1_0142
so part of: sequence
location: complement(123952..125643)
location: region:123952-125643:-1
so has part: feature:123952-125643:-1:exon
subclass of: SO_0000010

position:123952:-1
position: 123952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125643:-1
position: 125643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123952-125643:-1:exon

SJPD1_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00705
old locus tag: SJPD1_0142
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768341.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MKISTRILISLILSLLILGACLIGISYTNTKNNAGMFINDYEKSAYSFYENELKTILEMMQQSANAIYKAEKAQGTSDEKIKETIVEQLDGLRFFDDKSGYLFIYEPDGTNVMLPTNKSLQGKNLSTLKDPNGVFFVKELIETAQKGGGLVKYFFPKVKDGKALAKFAYSVPFEPYKWTIGTGIYVDNVEAEVGKLKTQIGDNVASQIRSFLLISLVLVILSIVATAMIIKKTISNPLNDLISKADNLSSGDGDLTQKLEITGNDEIAQASHSINRFIEKVRLLISEAKNLSNENSSISHELSSTSLEVGKAVETSMNIVGNTTTKANTLKDEMHIGMGEAKAGKEELLKANSYLTEANRAILELTKDIQTSATIEIELAHRVQQLSSDASQVKEILVVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERTQKSLQEINATINVIVQAIADSSDQMTSNSKKVESLATTASEVETKINNMFHVMGNATKVSDKTAENYLKTGSDIESMINNVSQINDISSQNARSVEEIASAAEHLSRMTETLNLKLSEFRT
SIO_010081: SJPD1_RS00705
subclass of: SO_0000673
so part of: SJPD1_RS00705
location: complement(123952..125643)
location: region:123952-125643:-1
so has part: feature:123952-125643:-1:exon

WP_096045521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123952-125643:-1:exon

SJPD1_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00710
old locus tag: SJPD1_0143
so part of: sequence
location: 125754..126938
location: region:125754-126938:1
so has part: feature:125754-126938:1:exon
subclass of: SO_0000010

position:125754:1
position: 125754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126938:1
position: 126938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125754-126938:1:exon

SJPD1_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00710
old locus tag: SJPD1_0143
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MNHYGELLRNNATLRRLSVIQLICYFGAWFSHMAIYTLLISLDAPVWALSTAAAFTFLPSMLLAPFSGAIIDKVNTKKFMLFLTAIEIFTVFWLMFIHSLDALWLLLVLILIRMGTGSIYFQTEMSLLPKLLSDDDLKTANEIHSVIWSTSYALGMAVAGFYIYYFGTTSAFIADMLLYCIGFYMLLGLDIPSLASKHALHVKTMIWSGFTYLRTHPKIIHIIFLHASIGFSAYDALIALLADHAYKHILSISLVMGAINAARALSQILGQLALSRYINPQTLFYLFIAQGVSIIVWGMLQYDFYLSFIGIFLCGLFTTTLWSYTYTLLQYETDEAFYGRVIAYNDMVFMGACTFVSFSIGALFDFGISLWQITCGLGAVFFLFGFYWKWIQKL
SIO_010081: SJPD1_RS00710
subclass of: SO_0000673
so part of: SJPD1_RS00710
location: 125754..126938
location: region:125754-126938:1
so has part: feature:125754-126938:1:exon

WP_096045522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125754-126938:1:exon

SJPD1_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00715
old locus tag: SJPD1_0144
so part of: sequence
location: 126971..128560
location: region:126971-128560:1
so has part: feature:126971-128560:1:exon
subclass of: SO_0000010

position:126971:1
position: 126971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128560:1
position: 128560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126971-128560:1:exon

SJPD1_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00715
old locus tag: SJPD1_0144
inference: COORDINATES: protein motif:HMM:NF014069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MNIRTRVKISFVLIIVMLLFLGMISVIITYQIKENSNFRESISSILLMQEGMNDIILESTKTTEVQKLEQLHAEFATYEKRFEYLRTKLSQHTHNYLSNALLPNIQKDKTIKHYLNTLYTNEHRLELMYDDIFKLECEKLEYVAIFKALYPEENSARVEIQEHILQNNRIEQIKILSDLRYYSKEMLYQHGNNATMLKWLAPIDKLIDTTKKGTGDLHENLIHYKEIVRTIAEKTIKIEETKLIEHTTIDQASEVLDDNKKVSISLEEMISELSSRFLDQMRLIQLLVGIVTILFIILLAIKVSRNVSLTMDEVEAKIEEGLEEVNALNREIEDTQKEVLFTMGSIGETRSKETGNHVKRVAEYTKILALYYGLDEEEAEMLKLASPMHDIGKIGIPDSVLNKPGRFNEVEREIMNTHAMLGYEMLKHSQRELLKMAAIVAKEHHERYDGKGYPDQKSGEDIHIYGRITALADVFDALGSARIYKPAWEDEKIFALFKEERGKQFDPKLVDIFFEHLDVFLETRENLKD
SIO_010081: SJPD1_RS00715
subclass of: SO_0000673
so part of: SJPD1_RS00715
location: 126971..128560
location: region:126971-128560:1
so has part: feature:126971-128560:1:exon

WP_096045523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126971-128560:1:exon

SJPD1_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00720
old locus tag: SJPD1_0145
so part of: sequence
location: 128622..128924
location: region:128622-128924:1
so has part: feature:128622-128924:1:exon
subclass of: SO_0000010

position:128622:1
position: 128622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128924:1
position: 128924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128622-128924:1:exon

SJPD1_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00720
old locus tag: SJPD1_0145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855914.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKILNTLLISAVLVLSGITSAQAMGDREQGALIGAGAVVLLGSLINASQQPTRYVESPVYYETRPTVVYREPIYVPERVIYVDPPRHHHYYEGGYYRSYR
SIO_010081: SJPD1_RS00720
subclass of: SO_0000673
so part of: SJPD1_RS00720
location: 128622..128924
location: region:128622-128924:1
so has part: feature:128622-128924:1:exon

WP_096045524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128622-128924:1:exon

SJPD1_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00725
old locus tag: SJPD1_0146
so part of: sequence
location: complement(128963..129601)
location: region:128963-129601:-1
so has part: feature:128963-129601:-1:exon
subclass of: SO_0000010

position:128963:-1
position: 128963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129601:-1
position: 129601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128963-129601:-1:exon

SJPD1_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00725
old locus tag: SJPD1_0146
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855913.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MKCKICNYPIKLWEDTQLQKRYFYCSNCHGICLDSAYYLTLEKEHSLYNNHRNSLENEGYVKMFEDFLDFFWNDLTCKEKALDFGSGPTPVLSQLMTNRGIHVDYYDKFYQPIKCFEDQTYDLITSTEVFEHLANPHEILKLLAQHLKPDGMIALMTLFHSDDKAHFLTWWYRRDPTHIIFYTPKTLEILARQCGLEVVKTDGKRIAILQKR
SIO_010081: SJPD1_RS00725
subclass of: SO_0000673
so part of: SJPD1_RS00725
location: complement(128963..129601)
location: region:128963-129601:-1
so has part: feature:128963-129601:-1:exon

WP_096045525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128963-129601:-1:exon

SJPD1_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00730
old locus tag: SJPD1_0147
so part of: sequence
location: 129728..130891
location: region:129728-130891:1
so has part: feature:129728-130891:1:exon
subclass of: SO_0000010

position:129728:1
position: 129728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130891:1
position: 130891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129728-130891:1:exon

SJPD1_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00730
old locus tag: SJPD1_0147
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MRKLIGILLFVSLFMLPYFFANTKFEGNVIRLGMSGPFSGGLTSVGNQFLLGAEIYLQNLNDHGGVYGRKIEIIAKDDRYEPKIAIENVDELIKKDKIFALFGIIGTPVAEAIFPIAIEKRIPFVGAYSGAEFLRNPPNPIVLNARASDLDEIEKLVQYYADDLKYKRFALFYQNDSYGRTGLSGVKNALAKRNLVLVGEGSYKRNTLSVGNALYEIELCNPEVILMIGSTTPTAEFIKRARKSQKIRQNIQFGLFSFIEPKPLIDFLHGNGKGITFAQVVPSPWTSEVEEVENYRMLMHKYYPKEELGHVSLEGYFAARMIAEVFKSLGKKFTKEEFIKALGTFSKTLDETAISKNRDERCKCLHRVHLSEYVDDDFYSVGQNDEH
SIO_010081: SJPD1_RS00730
subclass of: SO_0000673
so part of: SJPD1_RS00730
location: 129728..130891
location: region:129728-130891:1
so has part: feature:129728-130891:1:exon

WP_096045526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129728-130891:1:exon

SJPD1_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00735
old locus tag: SJPD1_0148
so part of: sequence
location: 130881..132497
location: region:130881-132497:1
so has part: feature:130881-132497:1:exon
subclass of: SO_0000010

position:130881:1
position: 130881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132497:1
position: 132497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130881-132497:1:exon

SJPD1_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00735
old locus tag: SJPD1_0148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855911.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MNTNPLSDFMGSIDEMTIAKKTTLLFLIMVVGMFFIGSFAHMSINRIKNNFDILYTKRMLPTIRLENLKDIYTVNVLDTIRDIEKGMISAQEGKTVIALAQELIKIELQEYKNSLSIDESDWLIKLARSWGFMDDPRHKPFFKTKEDDILISKIEQKIHTIDGILLKMFNYFETKQSPKAIDILQNELYPSVYSINIDLTGLINLNLDSAKEGYARTEKVYDNTFEWIVVATIGTIAFAALLAIVLLQNIRLLHARLAKMVDAKTYELQQLNRNLELKVQHEVDQSRQKDQIMFRQSRLASMGEMIGNIAHQWRQPLNAIVLIIQSFQMKRLAGIELSDEFIDRQVKEGIALASLMSHTIDDFRNFFKPNKNEEHFSVKDTVEYSLKLVKAYYAKSGIDIFLNCTQDVQISGYPNEFSQVLMNLFSNAKDVLEERNIEEKYIEIIITKQANNAVISVIDNGGGISEEVQDRMFEPYFTTKHKSSGTGIGLYMSKQIIEKQMRGSIIGTNISYVFSNGKRYEKCAIITILVPLDKKEDK
SIO_010081: SJPD1_RS00735
subclass of: SO_0000673
so part of: SJPD1_RS00735
location: 130881..132497
location: region:130881-132497:1
so has part: feature:130881-132497:1:exon

WP_096045527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130881-132497:1:exon

SJPD1_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00740
old locus tag: SJPD1_0149
so part of: sequence
location: 132499..133158
location: region:132499-133158:1
so has part: feature:132499-133158:1:exon
subclass of: SO_0000010

position:132499:1
position: 132499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133158:1
position: 133158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132499-133158:1:exon

SJPD1_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00740
old locus tag: SJPD1_0149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855910.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MDFNGLKDCVVLYVEDEKSVQIQTQMILKDFVKEVYIASNGEEGLKIALEKDIDIIVTDILMPVMNGIEMLKKLKNEYHRDIPAIITTAFTETEYLIEAITLKVDGFIMKPINVKDLISTIYSAMLPKLHSKEIQGCSFIIEGLAALIGGKKIEILKYIISHLDDDKIFNGSYQDIIDNIGVSKPTVVHMFQQLIKVGILEKVKNKMYRFRNTKLVGDQ
SIO_010081: SJPD1_RS00740
subclass of: SO_0000673
so part of: SJPD1_RS00740
location: 132499..133158
location: region:132499-133158:1
so has part: feature:132499-133158:1:exon

WP_087437444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132499-133158:1:exon

SJPD1_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00745
old locus tag: SJPD1_0150
so part of: sequence
location: 133159..133677
location: region:133159-133677:1
so has part: feature:133159-133677:1:exon
subclass of: SO_0000010

position:133159:1
position: 133159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133677:1
position: 133677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133159-133677:1:exon

SJPD1_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00745
old locus tag: SJPD1_0150
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768349.1
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO process: GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase
translation: MRKIVLVLLLGIWSALMASEVVFETTQGTIVFALKPEVAPKACENFEGLVKKGYYNGITFHRIIKGFMIQGGDPTGTGRGGESIYGKPFEDEFKPNIVFNKPGILAMANAGRNTNGSQFFITTVPTPHLNGRHTIFGEVVEGMDVVRKLENITTDGRDMPMQPQKILKAYLK
SIO_010081: SJPD1_RS00745
subclass of: SO_0000673
so part of: SJPD1_RS00745
location: 133159..133677
location: region:133159-133677:1
so has part: feature:133159-133677:1:exon

WP_096045528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133159-133677:1:exon

SJPD1_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00750
old locus tag: SJPD1_0151
so part of: sequence
location: 133725..134063
location: region:133725-134063:1
so has part: feature:133725-134063:1:exon
subclass of: SO_0000010

position:133725:1
position: 133725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134063:1
position: 134063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133725-134063:1:exon

SJPD1_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00750
old locus tag: SJPD1_0151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768350.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-II family nitrogen regulator
translation: MKKIEAIIKPFKLEEVKDALASIEVTGMTVNEVKGYGRQQGHSELYRGAEYVVDFLPKIKLDIVVADENVDKVISTILEAAKTGKIGDGKIFVSDIQRIIRIRTAEENEDAI
SIO_010081: SJPD1_RS00750
subclass of: SO_0000673
so part of: SJPD1_RS00750
location: 133725..134063
location: region:133725-134063:1
so has part: feature:133725-134063:1:exon

WP_087437446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133725-134063:1:exon

SJPD1_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00755
old locus tag: SJPD1_0152
so part of: sequence
location: 134159..135340
location: region:134159-135340:1
so has part: feature:134159-135340:1:exon
subclass of: SO_0000010

position:134159:1
position: 134159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135340:1
position: 135340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134159-135340:1:exon

SJPD1_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00755
old locus tag: SJPD1_0152
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008351251.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ammonium transporter
translation: MDQSHMHYIIDTFFLLFSSVLIIFMVPGFAMLEAGLVRSKNVSAVLTGNVMLYAITSFIFLLWGYNNMFGGNGFFLEGVTTDGYSPYAYFLFQMAFVSKTVSIMSGGVSERIRIIPFMIFAVLMSGFIYPIVGNAIWGGGFLKEVHDLAGCTVIHSVGGWALLAGILVLGARRGRYSKEGQIRAIPASNIPLVTLGGMLLWIGWFGFNGGSAFHISSVEHADLVGLIIVNTNTAGLAGAIIAAMIVYVQYRKLDITMILNGALGGLVAITASADVVGLWEPIIIGAVGGTLVVFAIPLFDKFKIDDPVGALSVHLVNGIWGTIAVALFADFSLVTQLKGIAITGLFTFPVSYVAFVIIKKVIGLRSDEEHEYVGLDLEECGLEAYPEFIKSKV
SIO_010081: SJPD1_RS00755
subclass of: SO_0000673
so part of: SJPD1_RS00755
location: 134159..135340
location: region:134159-135340:1
so has part: feature:134159-135340:1:exon

WP_096045529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134159-135340:1:exon

SJPD1_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00760
old locus tag: SJPD1_0153
so part of: sequence
location: complement(135391..136410)
location: region:135391-136410:-1
so has part: feature:135391-136410:-1:exon
subclass of: SO_0000010

position:135391:-1
position: 135391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136410:-1
position: 136410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135391-136410:-1:exon

SJPD1_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00760
old locus tag: SJPD1_0153
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014468272.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldo/keto reductase
translation: MEYRYIGKSGLRVTPICMGTMSFGSWSNKTESFKILDTAYDRGINFFDTAELYPVPPKESYAGVTEEIISEWLATKPRESIILATKIAGAANGWFVPPIRHGYTAIDRFHIQKAVEGSLKRLKTDYIDLYQVHWPDEIVPKEESMRAFDELIQSGKVRYIGTSNDTAYGLTKSNTISQYEKLARFESIQNNFSLLNPRFLDELANVCRKESISLLPYSPMAGGVLSGKYNQTFIDPKSRFGEYLQAGEPRQKAMYKRFVNDKSLSATAKYIEIAKKYGMSPVTLAIAWSMHFDFVASTIIGARYATQLEESFKALEIKLSPEVLNECEKVQKEILYPMG
SIO_010081: SJPD1_RS00760
subclass of: SO_0000673
so part of: SJPD1_RS00760
location: complement(135391..136410)
location: region:135391-136410:-1
so has part: feature:135391-136410:-1:exon

WP_096045530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135391-136410:-1:exon

SJPD1_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: pyrC
locus tag: SJPD1_RS00765
old locus tag: SJPD1_0154
so part of: sequence
location: 136503..137510
location: region:136503-137510:1
so has part: feature:136503-137510:1:exon
subclass of: SO_0000010

position:136503:1
position: 136503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137510:1
position: 137510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136503-137510:1:exon

SJPD1_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: pyrC
locus tag: SJPD1_RS00765
old locus tag: SJPD1_0154
EC number: 3.5.2.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008335141.1
GO function: GO:0004151 - dihydroorotase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroorotase
translation: MTHTLFSPLDMHLHLRDEAMLKVVAPLSAHSFAGGIIMPNVVPPITTIEAVLSYKERIISAIGNNVFDPLMTLFFRSDYTREFLEKAALHVKALKLYPSGITTNSEGGVASMDIETLRPVLEAMSDLGLVLCVHGETNGFVMDREKEFGSIYESLASAFPRLKIVMEHITTKESVALLDKYENLYATITLHHLLITLDDVAGGMLQPHLFCKPIAKRYEDRDALLHVSLKAHPKVMFGSDSAPHPIHKKECCGCAAGVFTAPIALQALVELFDKHNALASLQAFVSNNAQTIYGYKPLYKEVILEKVPFYVTHSYADVVPMFANETLAWSITHVV
SIO_010081: SJPD1_RS00765
subclass of: SO_0000673
so part of: SJPD1_RS00765
location: 136503..137510
location: region:136503-137510:1
so has part: feature:136503-137510:1:exon

WP_096045531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136503-137510:1:exon

SJPD1_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00770
old locus tag: SJPD1_0155
so part of: sequence
location: 137500..138165
location: region:137500-138165:1
so has part: feature:137500-138165:1:exon
subclass of: SO_0000010

position:137500:1
position: 137500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138165:1
position: 138165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137500-138165:1:exon

SJPD1_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00770
old locus tag: SJPD1_0155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014474145.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MSYKILILEDNTLLLQTLEDFLGGHDYICTLVSSGKEALKQCYENKYDLYLLDVKVPDLSGFDFLKELRASGDRTPAIFVTSLSDQESLTKGFMLGGDDYIKKPFDLGELLLRIKALLARAKGIVDDWLEIDDEYKLNLARKRLFHNQEELDINLKDFELLYLLVKERGKVVTKEMIHERLWSSSEEINEGSIRVYINNLKKIFGKDSILNIRGIGYRFEK
SIO_010081: SJPD1_RS00770
subclass of: SO_0000673
so part of: SJPD1_RS00770
location: 137500..138165
location: region:137500-138165:1
so has part: feature:137500-138165:1:exon

WP_096045532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137500-138165:1:exon

SJPD1_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00775
old locus tag: SJPD1_0156
so part of: sequence
location: 138155..139003
location: region:138155-139003:1
so has part: feature:138155-139003:1:exon
subclass of: SO_0000010

position:138155:1
position: 138155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139003:1
position: 139003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138155-139003:1:exon

SJPD1_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00775
old locus tag: SJPD1_0156
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855925.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MRSSDRIFFIRSVLAFSVAICFVALFGIALWEYLGESKVWVIVPLLVTSLIIGYLIVSYTLSSLFKTNRFLDILLKDTLHELNIPLSVINANLQMLQADEQDVKKLKRLERIELASKDLYTLYQEVDYYIKKEIQSDVREKFYLDELVMKVVEKQKEMANGVDIFYNVLHVELFADKHGLAKVISNLVHNALKYNQNHNPLSIFQEEDTLIIKDQGIGMSEAELFLAFNRYYQVDTTKEGYGIGLSLVKAYCDEFKIAMRINSQKNVGTEVILDIAYLLNKK
SIO_010081: SJPD1_RS00775
subclass of: SO_0000673
so part of: SJPD1_RS00775
location: 138155..139003
location: region:138155-139003:1
so has part: feature:138155-139003:1:exon

WP_096045533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138155-139003:1:exon

SJPD1_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00780
old locus tag: SJPD1_0157
so part of: sequence
location: 139036..140187
location: region:139036-140187:1
so has part: feature:139036-140187:1:exon
subclass of: SO_0000010

position:139036:1
position: 139036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140187:1
position: 140187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139036-140187:1:exon

SJPD1_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00780
old locus tag: SJPD1_0157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855926.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PilZ domain-containing protein
translation: MENEVVSQSDKEKFLATSELFLKEFEEKFIDYFTCLCISYDKVITKEEAKEVALAIYQGLFKCDYDIGELREDVFVHMRQDGVMIGFLINRSMFYLIENYITFTKMHDMTPQIELLIGCVSRFINLIESEVTPKVCNFTGAFDMSFSNDVMFSPTNNIIETFNQMKQEKQSVVFLNLYKGVPVSSEATVVDIEGENVTFKIDQLQEIAMKLDGQAFIVKNDYFNKHLKADIVYSNFQTNTVVLTNFIYLLNMPALQREFIRVHPDIIAKVFLHQFGNLQTSGRLYDLSMSGLGVVSNENNGMFIGAKVLIAFELNSAFVSTDGDRKIEVQGEVINIIEYKDSYRYCMRIFPDRIMSEKILRYITLREREILEDLNSELKDYLV
SIO_010081: SJPD1_RS00780
subclass of: SO_0000673
so part of: SJPD1_RS00780
location: 139036..140187
location: region:139036-140187:1
so has part: feature:139036-140187:1:exon

WP_096045534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139036-140187:1:exon

SJPD1_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00785
old locus tag: SJPD1_0158
so part of: sequence
location: complement(140217..141182)
location: region:140217-141182:-1
so has part: feature:140217-141182:-1:exon
subclass of: SO_0000010

position:140217:-1
position: 140217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141182:-1
position: 141182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140217-141182:-1:exon

SJPD1_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00785
old locus tag: SJPD1_0158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MAKGKQNLLHNKAFGHVVAVAFYVAIGYLLFVAASNMNYIWKWTSVPKYFAYEKTDTIAAPLDGTIKINGTSLIIQGRDDSKEIAIENGYSINVKDGDSVYERDTLAKKTSMHIGPLLEGLIVTLEVSGLAAILAFSIGALLAFMRISNYQFFKDIATVYIAIIRGTPLLVQIFIFYFIIATIFELERFLAGAISLGLFFGAYIAEVLRGAIQSIDKGQYEAAKSLGMNYTQTMLYIIMPQALKRALPTLVGEMIALVKDSSLVSVISITDLTKVGREIVANTFSPFETWLIIAAVYFAITFSLSVLGHKIEMKMKKQGGM
SIO_010081: SJPD1_RS00785
subclass of: SO_0000673
so part of: SJPD1_RS00785
location: complement(140217..141182)
location: region:140217-141182:-1
so has part: feature:140217-141182:-1:exon

WP_096045535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140217-141182:-1:exon

SJPD1_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00790
old locus tag: SJPD1_0159
so part of: sequence
location: complement(141186..141989)
location: region:141186-141989:-1
so has part: feature:141186-141989:-1:exon
subclass of: SO_0000010

position:141186:-1
position: 141186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141989:-1
position: 141989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141186-141989:-1:exon

SJPD1_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00790
old locus tag: SJPD1_0159
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter substrate-binding domain-containing protein
translation: MKKFLVALLVMLGINAMADDINLWQKSTLNSIIQKGVLTVGLEPGYMPFEMKDKQGNIIGFDVDMANEMAKAMGVKLQLVPTAWDGIIAGLLTGKYDIIMSGMTITQERNLKINFANPYISVGQTILASKKHAGKKWSDLDKPEYTIVTKIGVTGEIATRKMFKKAKIRTFETEADAAQEVLNGNADGMVYDKPYNAIFFAEKGATGKLVHLDEELTYEPLGFAIRKGDPDFLNWLNNFLNQTQHDGTYKKIYDRWFTDTAWQKKVM
SIO_010081: SJPD1_RS00790
subclass of: SO_0000673
so part of: SJPD1_RS00790
location: complement(141186..141989)
location: region:141186-141989:-1
so has part: feature:141186-141989:-1:exon

WP_096045536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141186-141989:-1:exon

SJPD1_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00795
old locus tag: SJPD1_0160
so part of: sequence
location: complement(142016..142756)
location: region:142016-142756:-1
so has part: feature:142016-142756:-1:exon
subclass of: SO_0000010

position:142016:-1
position: 142016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142756:-1
position: 142756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142016-142756:-1:exon

SJPD1_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00795
old locus tag: SJPD1_0160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855929.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter ATP-binding protein
translation: MSQAIVRMENVNKYYGTFHVLKNINFSVTEGEIVVICGPSGSGKSTLIRCINKLEEIDNGEIVIDGFDLYAKKVNINQVRAETGMVFQHFNLFPHLTILENITIAQRKVKGISKHDANEAALKLLERVGLVHKAEGYPNELSGGQKQRVAIARTLAMKPKIILFDEPTSALDPEMIGGVLDVMRELAHENFTIVCVTHEMGFAKEVCDRIVFMDEGVIIEEATPEAFFANPKTERAQKFLQEILTH
SIO_010081: SJPD1_RS00795
subclass of: SO_0000673
so part of: SJPD1_RS00795
location: complement(142016..142756)
location: region:142016-142756:-1
so has part: feature:142016-142756:-1:exon

WP_096045537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142016-142756:-1:exon

SJPD1_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00800
old locus tag: SJPD1_0161
so part of: sequence
location: complement(142855..143169)
location: region:142855-143169:-1
so has part: feature:142855-143169:-1:exon
subclass of: SO_0000010

position:142855:-1
position: 142855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143169:-1
position: 143169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142855-143169:-1:exon

SJPD1_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00800
old locus tag: SJPD1_0161
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: cytochrome C
translation: MKKIICALFFGTCLLSTSLYASTVKGKVFYAQYLKPVCGFNGDVMGKKHTANEWKIFYDNNQLSLAIKALCPNAPLITTEKDLTNLYHFLSSFASDSGNVPSCN
SIO_010081: SJPD1_RS00800
subclass of: SO_0000673
so part of: SJPD1_RS00800
location: complement(142855..143169)
location: region:142855-143169:-1
so has part: feature:142855-143169:-1:exon

WP_096045538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142855-143169:-1:exon

SJPD1_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00805
old locus tag: SJPD1_0162
so part of: sequence
location: complement(143186..143500)
location: region:143186-143500:-1
so has part: feature:143186-143500:-1:exon
subclass of: SO_0000010

position:143186:-1
position: 143186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143500:-1
position: 143500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143186-143500:-1:exon

SJPD1_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00805
old locus tag: SJPD1_0162
inference: COORDINATES: protein motif:HMM:NF012264.2
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome
translation: MARNIKNSLLTLLFLSSFLSAQNNGETLFKQCAGCHGADGRNKAFGKSGIIAGQSVAELMESLKFYKESEFKTHSTTLVMSKQVKNMNMEDLNEIANYVSKLQK
SIO_010081: SJPD1_RS00805
subclass of: SO_0000673
so part of: SJPD1_RS00805
location: complement(143186..143500)
location: region:143186-143500:-1
so has part: feature:143186-143500:-1:exon

WP_096045539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143186-143500:-1:exon

SJPD1_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00810
old locus tag: SJPD1_0163
so part of: sequence
location: 143678..144583
location: region:143678-144583:1
so has part: feature:143678-144583:1:exon
subclass of: SO_0000010

position:143678:1
position: 143678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144583:1
position: 144583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143678-144583:1:exon

SJPD1_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00810
old locus tag: SJPD1_0163
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855932.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MISNKFKELGADFLLLMVAVAWGSTFFVVQAAVNETPVYTFLFWRFSLAGLLMALISFKQIRYLNFKVLKAGALLGLFMFLGYAFQTFALTYTYSSTVGFITGLSVIVVPFVTYLIFKQKASMFSTLGAIIASVGLYFLTLNNELGLSLGEFYAFVCAMMFALHIVFTGHLSRQHNIYLLVMIQFLTVGICSFIGGFMMEDSIMPPNTNRLFVDAIAITVIFATIFAFWVQTAMQRFTTAAKTAIIFTMEPVSAGIFGYFFANELLTFPQICGAVMILGGMLTAELGSYYMEQYRRRNNAI
SIO_010081: SJPD1_RS00810
subclass of: SO_0000673
so part of: SJPD1_RS00810
location: 143678..144583
location: region:143678-144583:1
so has part: feature:143678-144583:1:exon

WP_096045540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143678-144583:1:exon

SJPD1_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00815
old locus tag: SJPD1_0164
so part of: sequence
location: 144722..145093
location: region:144722-145093:1
so has part: feature:144722-145093:1:exon
subclass of: SO_0000010

position:144722:1
position: 144722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145093:1
position: 145093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144722-145093:1:exon

SJPD1_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00815
old locus tag: SJPD1_0164
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768363.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor
translation: MSEQIKTLFQEHDIKFTAARSSILEVLKETHHPMNYEQIKEKMNITMDKATFYRNIAKFEELGMVHKFEADDRKWYFELSSTTHAHFICEQCHQITCMNVDLGNVEGDVKSIVLKGTCKECRT
SIO_010081: SJPD1_RS00815
subclass of: SO_0000673
so part of: SJPD1_RS00815
location: 144722..145093
location: region:144722-145093:1
so has part: feature:144722-145093:1:exon

WP_096045541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144722-145093:1:exon

SJPD1_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00820
old locus tag: SJPD1_0165
so part of: sequence
location: 145090..145572
location: region:145090-145572:1
so has part: feature:145090-145572:1:exon
subclass of: SO_0000010

position:145090:1
position: 145090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145572:1
position: 145572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145090-145572:1:exon

SJPD1_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00820
old locus tag: SJPD1_0165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLLHVSFLVLFFLSGCAVKKNITTSETYVITIKNKQIALSDTGFINQGQDYTNVQIFSAGSVLFNLEMMGNSICLDGRCMDKLSFNQQFFQEEHYVGLMEEIIAKQPIFEGKNLHQTSHGFEQELDFPHSHIIYKIEDSNLSFRDTKQGILIRLKPLQ
SIO_010081: SJPD1_RS00820
subclass of: SO_0000673
so part of: SJPD1_RS00820
location: 145090..145572
location: region:145090-145572:1
so has part: feature:145090-145572:1:exon

WP_096045542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145090-145572:1:exon

SJPD1_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nfo
locus tag: SJPD1_RS00825
old locus tag: SJPD1_0166
so part of: sequence
location: 145582..146424
location: region:145582-146424:1
so has part: feature:145582-146424:1:exon
subclass of: SO_0000010

position:145582:1
position: 145582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146424:1
position: 146424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145582-146424:1:exon

SJPD1_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nfo
locus tag: SJPD1_RS00825
old locus tag: SJPD1_0166
EC number: 3.1.21.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855938.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: deoxyribonuclease IV
translation: MKFVGAHVSASGGVFNAPINATKIGAKAFALFTKNQRQWEGKPLTQDEIDRFKVELEKAQILPKHVLPHDSYLINIGHPEHEAREKSLSAFLDEVKRCEALGLDKLNFHPGSHLKQIDEEACLELISASMNEVLRQTSGVSLIVENTAGQGSNMGYKMEHLGYLMDNSIDKERVGVCIDTCHLFTSGYDIRSEEVYRQTMEKFATIVGFKYLKGMHLNDSKPDLGARVDRHDSIGKGKLGVEPFRFIMNDERLNDIPLVLETIDDSIWAEEIALLYSLVN
SIO_010081: SJPD1_RS00825
subclass of: SO_0000673
so part of: SJPD1_RS00825
location: 145582..146424
location: region:145582-146424:1
so has part: feature:145582-146424:1:exon

WP_096045543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145582-146424:1:exon

SJPD1_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00830
old locus tag: SJPD1_0167
so part of: sequence
location: 146444..147661
location: region:146444-147661:1
so has part: feature:146444-147661:1:exon
subclass of: SO_0000010

position:146444:1
position: 146444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147661:1
position: 147661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146444-147661:1:exon

SJPD1_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00830
old locus tag: SJPD1_0167
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768366.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpP1/FadL family transporter
translation: MKQTVKVVTLLSLSAATLLASGYRIPEQSLNSVALSAAYVAGANGADASYYNPANMSFMENGAFTEVAMTYINLPKVKYTDAQSSTLNGDSKEEQFLMPNLHYVSPMVGNWRYGLSITAPAGLSKRWDEAFPKASSEEFTLKVIEVNPTASYLVNDQFSLGFGVRGVYTDGVVKSNASGLGSPANRDLTGDSIDFGYNLALSYKPIKDLTLAATYRSKVDLTVEGDATLVSGMYKGGASVTIPLPASLALATAYTYDKTTVEFVYERTYWSAYKNLDFNYDVDLTATAMAAFDKPILKNWKDSNAYRIGLSHQCTDNLKMMLGFAIDKSPTPDNTLGFELPDSDAKLYSIGFEYKVTQNLKVGLAYLYDDKEDRTITSRANSTAPYGTFSDSAAHLVTASFKYKF
SIO_010081: SJPD1_RS00830
subclass of: SO_0000673
so part of: SJPD1_RS00830
location: 146444..147661
location: region:146444-147661:1
so has part: feature:146444-147661:1:exon

WP_096045544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146444-147661:1:exon

SJPD1_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00835
old locus tag: SJPD1_0168
so part of: sequence
location: 147664..149229
location: region:147664-149229:1
so has part: feature:147664-149229:1:exon
subclass of: SO_0000010

position:147664:1
position: 147664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149229:1
position: 149229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147664-149229:1:exon

SJPD1_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00835
old locus tag: SJPD1_0168
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768367.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fatty acid--CoA ligase
translation: MLTYPYQNFYEIIEANAKNAPKKTAIFIDDRKVTYSKLKQNIDTFARFLEFSGIKSGERVAMIVGNSEEFVVSLFAITKIGAIAVPLNTFLKKEEFEYILNDCGARMLISSASFANETKNLLNTTKIEKIVWTDKYPYLDEQNYSFTEIDANLGNHERSLKRPRLDDLACIVYTSGTTGKPKGAMLSYRNFFSNAIAGSISFQITEKDRFIVFLPMFHSFTLSIMVLLPMFTCSSIVIVRSVFPFANVLKQTLLKQVTIFLGVPTLYNALLKAKIPWYFMWFNKVRIFISGSAPLSEQSLHDFNAKFKKAKLLEGYGLSECSPAVCVNRLDHQKPLSVGLPLPSYEVKIVNEEMMEVRTGEVGEIMVKGDCVMHGYLNHVNSTDETIMNGWLLTGDLGKKDEDGFIYIVDRKKDLIISKGINIYPREIEEIIYKYEGVDSVAVIGVKDETKDEDVLAFIQPKEGIELQEMELRQYLKKHLANFKLPKHIYFVEELPKNATGKVLKRILKEKVQSGGILRKK
SIO_010081: SJPD1_RS00835
subclass of: SO_0000673
so part of: SJPD1_RS00835
location: 147664..149229
location: region:147664-149229:1
so has part: feature:147664-149229:1:exon

WP_096045545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147664-149229:1:exon

SJPD1_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00840
old locus tag: SJPD1_0169
so part of: sequence
location: 149321..151054
location: region:149321-151054:1
so has part: feature:149321-151054:1:exon
subclass of: SO_0000010

position:149321:1
position: 149321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151054:1
position: 151054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149321-151054:1:exon

SJPD1_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00840
old locus tag: SJPD1_0169
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008337015.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MQYLVDFLESKTVQTSKIYEHLKCSIDEAKFLQMMTKEYVLGSVEMGVADGLIKLFGDKNYAHLQQLSLVKDIIEQGWIIQNSFLTSKIMDVSNLELLNSTVTLSSAFLKLLEEGTLEVVLPDVTPYEDHLEYLKDQFFRIELYQKLSQTKHNATENSPSIGRLKNKLELLESRIVERIKVTQNEIIVETIFKENELNAKEQLIFLALLKEEYAGEFESLRDMNTLISLISIDDYEKIKNRSLLEEGSKLIENLIIDYDEMLSTFGGVTRSFFISEEFLQKIMHPNKEKKSKKIKLDMLIGEQELFELIDPKTNLDDVILHPKTKEVLDNLLKQIDKNVVKLLREWGIKERRSGIDAKIILYGPPGTGKTMTALSLAKSMKKRVLSFDCSKILSKYVGESEKNVRSIFDTYKELCKKTKSEPLLLLNEADQFLSARSTDSGASADKMHNQMQNIFLEQIERFDGLLIATTNLLETIDPAFSRRFDYKIAFEKPDLKQRIELWKKLLPENATYEEGLDIEKLASYPLTGGQIKVVLKNTALKVATKVKPLFTFEDFKLAIDRETKGAFGDAKSVGFMN
SIO_010081: SJPD1_RS00840
subclass of: SO_0000673
so part of: SJPD1_RS00840
location: 149321..151054
location: region:149321-151054:1
so has part: feature:149321-151054:1:exon

WP_096045546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149321-151054:1:exon

SJPD1_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00845
old locus tag: SJPD1_0170
so part of: sequence
location: 151249..151638
location: region:151249-151638:1
so has part: feature:151249-151638:1:exon
subclass of: SO_0000010

position:151249:1
position: 151249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151638:1
position: 151638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151249-151638:1:exon

SJPD1_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00845
old locus tag: SJPD1_0170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011373443.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-quinone oxidoreductase subunit 3
translation: MSHMDFAHPYFGAFFLLIFGAVVFYGITVLARSISRKMARLDTEKLKLGIYECGPEVTKQPNKISAHFYLFAVLFILFDVEIIFMFPWAVDFKVLGMFGFTEMILFVIVLTIGFVYAWKKGALEWHSIR
SIO_010081: SJPD1_RS00845
subclass of: SO_0000673
so part of: SJPD1_RS00845
location: 151249..151638
location: region:151249-151638:1
so has part: feature:151249-151638:1:exon

WP_096047761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151249-151638:1:exon

SJPD1_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00850
old locus tag: SJPD1_0171
so part of: sequence
location: 151620..152129
location: region:151620-152129:1
so has part: feature:151620-152129:1:exon
subclass of: SO_0000010

position:151620:1
position: 151620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152129:1
position: 152129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151620-152129:1:exon

SJPD1_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00850
old locus tag: SJPD1_0171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011373442.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit B
translation: MAQHKINYLQEAGLPVALTTVDKLVQWGRSNSLWPLTYGLACCAIEMMATGASRYDFDRFGTIFRASPRQADVLVIAGTLTKKHAPFMRRLYDQMPDPKWVISMGSCANTGGMFNTYATVQGADRIVPVDIYLPGCAPRPETLQYALMLLQKKIRTEKASRRLEPKRLV
SIO_010081: SJPD1_RS00850
subclass of: SO_0000673
so part of: SJPD1_RS00850
location: 151620..152129
location: region:151620-152129:1
so has part: feature:151620-152129:1:exon

WP_087437461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151620-152129:1:exon

SJPD1_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00855
old locus tag: SJPD1_0172
so part of: sequence
location: 152126..152926
location: region:152126-152926:1
so has part: feature:152126-152926:1:exon
subclass of: SO_0000010

position:152126:1
position: 152126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152926:1
position: 152926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152126-152926:1:exon

SJPD1_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00855
old locus tag: SJPD1_0172
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit C
translation: MMRSYSDKQNVQKKPYFSDRYFVAPQIPKDIVESDEIFTNDLSVLKAKFEIKEAYIQRGQLVVYIDPKDNVAVLKTLRDELSYNFLTEHSAIDWLAKSGEFEIFYQLLSTFKRKRLRVKCFIKEKEVLKSVSSLYASANWAEREMYDMFGVIISGHPYMKRLLMPDDWFDHPLRKTYPLHGDEVAQWYEIDKIFGKEYRDIIGPEERDSARIDVNDTYRFAHLNHEVPFGAEPSQEKTFTDYQEEGGVFIVKKLKKEDAKIVKERY
SIO_010081: SJPD1_RS00855
subclass of: SO_0000673
so part of: SJPD1_RS00855
location: 152126..152926
location: region:152126-152926:1
so has part: feature:152126-152926:1:exon

WP_096045547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152126-152926:1:exon

SJPD1_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nuoD
locus tag: SJPD1_RS00860
old locus tag: SJPD1_0173
so part of: sequence
location: 152929..154155
location: region:152929-154155:1
so has part: feature:152929-154155:1:exon
subclass of: SO_0000010

position:152929:1
position: 152929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154155:1
position: 154155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152929-154155:1:exon

SJPD1_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nuoD
locus tag: SJPD1_RS00860
old locus tag: SJPD1_0173
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768371.1
GO function: GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH dehydrogenase (quinone) subunit D
translation: MQKVNRLKPFFENVVFEREDNHMIVNFGPQHPSSHGQLRLILELDGEKVSKATPDIGYLHRGMEKMAENMIYNEFLPTTDRMDYIAASANNYGFALAVETLIGLEVPRRAKVIRMMILELNRISSHLFWLATHALDVGAMTIFLYAFREREYTLDLIEDYCGARLTHSSVRIGGVPLDLPQGWIAGLNKFINHLPLDIGDYEGLLDQNRIWKMRLEDVGVVTPEQAQSWGCSGPMLRGSGIAWDIRKEEPYELYNEVEFDVPVSTTCDSYGRYKLHMEEMRQSIRILKQLIPMYEQTSPEIIAHAPSYVSAPKEQIMTQNYSLMQHFVLVTQGMRPPVGEVYVATESPKGELGFYINSQGDPYPYRLKLRTPSFFHTAFLQELLVGEYLADVVAIIGNANIVFGEIDR
SIO_010081: SJPD1_RS00860
subclass of: SO_0000673
so part of: SJPD1_RS00860
location: 152929..154155
location: region:152929-154155:1
so has part: feature:152929-154155:1:exon

WP_096045548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152929-154155:1:exon

SJPD1_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00865
old locus tag: SJPD1_0174
so part of: sequence
location: 154164..154403
location: region:154164-154403:1
so has part: feature:154164-154403:1:exon
subclass of: SO_0000010

position:154164:1
position: 154164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154403:1
position: 154403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154164-154403:1:exon

SJPD1_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00865
old locus tag: SJPD1_0174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768372.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-ubiquinone oxidoreductase subunit E family protein
translation: MQRYDLRHLGDDFYGRMLEIIDETSLGEVSIFMFEIGDFSPIQKSADVIKEAGWTLMNSLKFNEADWTIVVKKVKSEVA
SIO_010081: SJPD1_RS00865
subclass of: SO_0000673
so part of: SJPD1_RS00865
location: 154164..154403
location: region:154164-154403:1
so has part: feature:154164-154403:1:exon

WP_096045549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154164-154403:1:exon

SJPD1_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00870
old locus tag: SJPD1_0175
so part of: sequence
location: 154403..155248
location: region:154403-155248:1
so has part: feature:154403-155248:1:exon
subclass of: SO_0000010

position:155248:1
position: 155248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154403-155248:1:exon

SJPD1_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00870
old locus tag: SJPD1_0175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATKQFIKGLNQSNNEQFAFTCKGFDLIICVGTLPSRYDATLFENLRASDAHMVYLFTMEDPTLVAKSAFFSRYEVGSEEGVFALLAKSFLLHVKIPEHIKNYFEELDEGYISAESNLGEEEIEEIEALYQEASHVLLVLGEDLVCHPRASAIAHLAGLIAKYGKAKLLVVGSTPEMIVTSKSETALDEVAELKSFDGVVVYQCPITKADEEQLLIGSAQFQMAAKVQNSDKISVTINQEVYPRTFVRDDSLKGVIALMPCAKADSSYPYHVVKIVKAEVQ
SIO_010081: SJPD1_RS00870
subclass of: SO_0000673
so part of: SJPD1_RS00870
location: 154403..155248
location: region:154403-155248:1
so has part: feature:154403-155248:1:exon

WP_096045550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154403-155248:1:exon

SJPD1_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00875
old locus tag: SJPD1_0176
so part of: sequence
location: 155245..157722
location: region:155245-157722:1
so has part: feature:155245-157722:1:exon
subclass of: SO_0000010

position:155245:1
position: 155245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157722:1
position: 157722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155245-157722:1:exon

SJPD1_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00875
old locus tag: SJPD1_0176
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855948.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit G
translation: MSDVLITIDGKQCTAQEGEYVLGVARRNDIFIPALCYVTNCSPTLACRLCLVDIDGKRAYSCNARAKEGMNVITKTEEIEKERRAIMEIYDINHPLECGVCDQSGECELQNYTLHMGVDSQHHCIADTHRPTKQWGKIHYDASLCIVCERCVTVCKDMIGESALKTVPRGGAELDKAWKDKTEKDAYAMWNKLQKSIIGIASGAETLDCTQCGECTAVCPVGALVGSDFQYTSNAWELKKIPASNPHSSDCSLLYYDVKHTSISNPSPKIYRVNSDHNYAPLHAAARYGFDFQNEVTCKDENTFTKAVELLQTKVDTIVFDSYMTNEEALILQKLKEKFGFKLINEDAKAYQNFLKHFASTAGTSLYGGDLKSIAESNFVVSFGTAIKTDSPNAGYAMNNAIGMNKGAGIYFHPVADPIVAGYSKNLLSITHKIGAEEAIAYLLLDLFGDKEAMPKSVVEYLATFHTIETKTIQESVKEEIKEMVKDEESGEEKEVVKTITKMVDKEIEVDTNALVEMIGAEADLVEKITKLLDKKDSFSLIAGEDLYNHPRAENIAKLLGLIERFTAFKLVIIPSRTNTLGVSLICDLDEQKGNFTLGYNVKGDFTLSALGKGDLDMPALNQQEGTFTSMNKRVVPTNAALPFKGYCLNDIANALGLETEWTIDYTPYLPLDKGFKAEKFDALPNRFENDGTENRGYVLTAQTFTCKDDVAPIESFTCKEGDVVYRANPVHQFSAFTNKAHQLNEAGALYVSTAFLEAKNLHDGAIVTLENDEGIKLPIAIKEEKMIDGLIAYLPTFDTKIDTAPFFKEGYRFAHVAIKGVEHA
SIO_010081: SJPD1_RS00875
subclass of: SO_0000673
so part of: SJPD1_RS00875
location: 155245..157722
location: region:155245-157722:1
so has part: feature:155245-157722:1:exon

WP_096045551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155245-157722:1:exon

SJPD1_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nuoH
locus tag: SJPD1_RS00880
old locus tag: SJPD1_0177
so part of: sequence
location: 157715..158707
location: region:157715-158707:1
so has part: feature:157715-158707:1:exon
subclass of: SO_0000010

position:157715:1
position: 157715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158707:1
position: 158707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157715-158707:1:exon

SJPD1_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nuoH
locus tag: SJPD1_RS00880
old locus tag: SJPD1_0177
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855949.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoH
translation: MLETAVVVETIVKAVIVVSIVAAMAGFATFIERKVLAFMQRRLGPMNVGPYGLLQLAADGIKLFTKEDIIPQNAVKPIFMIAPVIAAVTAFVAMAAVPYFPEFTLFGYVIHPIISDINVALLYVMGVASVGIYGPLLAGMSSANKWSLLGAARAVVQMLSFEVVSGLSVLAPIMLIGSLSLIDINDYQVGGMSHWLIWKQPLAFILFAMSGFMETNRAPFDTIEFEAEVVAGYATEYSGMRWGLFFIGEYANMITISVLVSIVFMGGYNPIWFIPGSLAMLVKVSLWIFIFLWVRAAWPHIRPDQLMWVCWKVLMPLAVVNILITGFVLI
SIO_010081: SJPD1_RS00880
subclass of: SO_0000673
so part of: SJPD1_RS00880
location: 157715..158707
location: region:157715-158707:1
so has part: feature:157715-158707:1:exon

WP_096045552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157715-158707:1:exon

SJPD1_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nuoI
locus tag: SJPD1_RS00885
old locus tag: SJPD1_0178
so part of: sequence
location: 158717..159331
location: region:158717-159331:1
so has part: feature:158717-159331:1:exon
subclass of: SO_0000010

position:158717:1
position: 158717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159331:1
position: 159331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158717-159331:1:exon

SJPD1_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nuoI
locus tag: SJPD1_RS00885
old locus tag: SJPD1_0178
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768376.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoI
translation: MELKDFTQRNCAPGYIFFEGENVPENGWQAFKKVVKRSLKGELFVGLWIVFREMIRFDIHTIQYPAQKYEMSPRYRAIHRLLRLFESGSERCIGCGLCEKICISNCIRMDTHIDEKSRKVVSEYSINFGRCIFCGYCAEVCPELAIVHGVEYENASEQRAHFGLKEDMLTPLDTFKAKQQKEFPGFGALSDNADDNVKQTPLAY
SIO_010081: SJPD1_RS00885
subclass of: SO_0000673
so part of: SJPD1_RS00885
location: 158717..159331
location: region:158717-159331:1
so has part: feature:158717-159331:1:exon

WP_096045553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158717-159331:1:exon

SJPD1_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00890
old locus tag: SJPD1_0179
so part of: sequence
location: 159339..159893
location: region:159339-159893:1
so has part: feature:159339-159893:1:exon
subclass of: SO_0000010

position:159339:1
position: 159339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159893:1
position: 159893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159339-159893:1:exon

SJPD1_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00890
old locus tag: SJPD1_0179
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768377.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit J
translation: MYEIIAFYVFATLTIGMFGIVVMSSNALYAMSALAGGMIFISGFFFILDAEFLGVVQIVVYSGAIMALYAFGMMFFDTTRDVSEKMRSKKIAYTLSVISAILVVTILCAPLASEEIEAMYPSIDTVGNVQMIGVVLFTKYLVPFELAAIMLLVAMIAGIVLASKRMDEYLAMEENEIEYPKETK
SIO_010081: SJPD1_RS00890
subclass of: SO_0000673
so part of: SJPD1_RS00890
location: 159339..159893
location: region:159339-159893:1
so has part: feature:159339-159893:1:exon

WP_087437469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159339-159893:1:exon

SJPD1_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nuoK
locus tag: SJPD1_RS00895
old locus tag: SJPD1_0180
so part of: sequence
location: 159890..160192
location: region:159890-160192:1
so has part: feature:159890-160192:1:exon
subclass of: SO_0000010

position:159890:1
position: 159890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160192:1
position: 160192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159890-160192:1:exon

SJPD1_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nuoK
locus tag: SJPD1_RS00895
old locus tag: SJPD1_0180
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855952.1
GO function: GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO process: GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoK
translation: MITLTHYLVLAGILFSIGLVGVMRRTNLLMLFFSTEILLNAINVGFVAVSKYYGDLTGQMFAFFIIAVAASEVAVGLGLLILWYKRNGSVDLNNLQTMKG
SIO_010081: SJPD1_RS00895
subclass of: SO_0000673
so part of: SJPD1_RS00895
location: 159890..160192
location: region:159890-160192:1
so has part: feature:159890-160192:1:exon

WP_087437470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159890-160192:1:exon

SJPD1_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nuoL
locus tag: SJPD1_RS00900
old locus tag: SJPD1_0181
so part of: sequence
location: 160195..162051
location: region:160195-162051:1
so has part: feature:160195-162051:1:exon
subclass of: SO_0000010

position:160195:1
position: 160195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162051:1
position: 162051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160195-162051:1:exon

SJPD1_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nuoL
locus tag: SJPD1_RS00900
old locus tag: SJPD1_0181
EC number: 7.1.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768379.1
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO process: GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit L
translation: MENYLYTALFAPLVSSLFVALFAARPKMLITGIIASLLIATSMVASFVLLINVNTYGPLHVTMMDWIAAGNLEVPFGFVVDEVSVIMMVTVTLVSTIVHVYSIGYMDHDKSFNRFFSYLSAFVFSMMILVMSDNFVGLFIGWEGVGLCSWLLIGFWYERHSASWAANEAFIMNRIADLGMLMGLFLIYWTVGSFQYDDVFASVKTMDPVLLATIGLFLFIGAMGKSAQFPLHTWLADAMEGPTPVSALIHAATMVTAGVYLVIRCGEMYTLIPDVGFAIASLGAFVAVFAASMALVNNDLKRIIAYSTLSQLGYMFVAAGLGAYWIALFHLMTHAFFKSLLFLGAGNVMHAMHDELNIKKMGGLYGSMKATAILMSVASVALAGIYPFAGFFSKDKILEVAFNEGAYFLWFALFIGAGLTAFYSFRLVMLVFFGEKEYVKYGLHPHDAQPFVIYAMLPLGLLAVVAGFLEHTFEGFVTRLLAQYEIHIAHGTEALLIAGTLGIALSGIAFAVFMYKRGGFPKSWEGSIGYKLLSNQYYIPKLYELYIMRPFTSIARFAWLKIDTKIVDFTVDLIAKIVYSTGQNARKMQSGNLSDMLRWMVVGMVVLLALALFYRPMV
SIO_010081: SJPD1_RS00900
subclass of: SO_0000673
so part of: SJPD1_RS00900
location: 160195..162051
location: region:160195-162051:1
so has part: feature:160195-162051:1:exon

WP_096045554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160195-162051:1:exon

SJPD1_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00905
old locus tag: SJPD1_0182
so part of: sequence
location: 162062..163588
location: region:162062-163588:1
so has part: feature:162062-163588:1:exon
subclass of: SO_0000010

position:162062:1
position: 162062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163588:1
position: 163588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162062-163588:1:exon

SJPD1_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00905
old locus tag: SJPD1_0182
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855954.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit M
translation: MEHILSLLVFFPAMAGLLGFLVTKESIRAYGISVSAIEFFLSIVLWIGFDSSNAGYQFVEYYPFVPSFGMSYYLGVDGISLFLIILSTFITMIAFIALSIKNEIKNLIISVLFLEMTMVGVFVILDVIWFYAFWELSLVPMLYIIGAWGSVNRVYAAIKFFLYTFAGSVLMLVGILYMGFLYHEATGIWSFALPDWYLLQVPFETQLWLFGAFFLAFAIKVPMFPFHTWLPYAHGQAPTIGSIILAAVLLKMGSYGFVRFSLPLFPDASAYFLIPVATICIIMVIYAAMIAYAQEDMKQVIAYSSISHMGIVILGTFAMNAEGITGSIFLMLSHGIVSGALFMLVGVIYDRRHTKMMRDFGGLASVMPNFATIYGIMLMASVGLPLTIGFVGEFLSLAGFYRINWMMTLFAGTGIILGAIYMLVLYRKSFFGPVVHEENKTLNDLNGKELTALIPLVALVAILGVYPKPVLNVIDMSVQKMLVLMEQKAVEQTTKDLIIKANTIGGTH
SIO_010081: SJPD1_RS00905
subclass of: SO_0000673
so part of: SJPD1_RS00905
location: 162062..163588
location: region:162062-163588:1
so has part: feature:162062-163588:1:exon

WP_096045555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162062-163588:1:exon

SJPD1_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nuoN
locus tag: SJPD1_RS00910
old locus tag: SJPD1_0183
so part of: sequence
location: 163588..165081
location: region:163588-165081:1
so has part: feature:163588-165081:1:exon
subclass of: SO_0000010

position:165081:1
position: 165081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163588-165081:1:exon

SJPD1_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nuoN
locus tag: SJPD1_RS00910
old locus tag: SJPD1_0183
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768381.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoN
translation: MLEPISIDMASLNLPALLPMAILTIGALAVICIDLAVKGLNRSFLTMFTILFIILDCGAVLGYNGPARGFFDVMLVDGISIIAQVIILVASAFFLPLSLSHRHFKEFRMAEFYALFMFMIVGFQFMVVSDNLILIFIGLETSSLALYTLIAMHNRAKAFEAAIKYFTMGALAASFYGVSALIFYALTGSIEINQIEKILMQREFEPLIGVLAATVFMLGALGFKLSLVPSHTWTPDVYEGSSAPLAGYMSVVPKIAGFVVAIRLFEMLVSSGVVWLENILYITVVLTMTLANLTALVQDDVKRMLAFSSISHAGFMMAAILIGTTQANTALFLYWILFMFTNLGAFTMLWIVRHPKNLWDERYQHPYAKFSGLVKIMPTTATIMGIFMFALAGMPPFSVFWGKLYLVSAAINSEYISLAIIIVLNSAIAIYYYMKLVIYMFLKDPDPVRADAALYATNASTPLKVIVGVAAIITMFAIVFVEPLLIIITKYVTASGF
SIO_010081: SJPD1_RS00910
subclass of: SO_0000673
so part of: SJPD1_RS00910
location: 163588..165081
location: region:163588-165081:1
so has part: feature:163588-165081:1:exon

WP_096045556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163588-165081:1:exon

SJPD1_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00915
old locus tag: SJPD1_0184
so part of: sequence
location: 165122..167518
location: region:165122-167518:1
so has part: feature:165122-167518:1:exon
subclass of: SO_0000010

position:165122:1
position: 165122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167518:1
position: 167518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165122-167518:1:exon

SJPD1_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00915
old locus tag: SJPD1_0184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768382.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYILIFLLASVQLLALDIVLNSGKENKSNYAILHVIDAKPFLCQTIPDALDKKHYICKISRPINKPIESKKMKLAELDFYEKDGDFYITIDPKVDSKLVPVEESLYDTSEILSKPTETLYSHWTILLQEKPLYQEKEVLDGLDFPVEFPKYQKPYIGALDLNGAPISYAQSKDIQLYLDIKQSYESGDYDSVVKDVKRVLTLFPNSIFRSELELYQMRSMDKVLSAKGEDKTDTLSFNENDIINVAKRWSKEFASDENIPEVLMLMTKAYLKTNSKSDANYALDILVGEHSDSPFTKRAILLYADNLFLKKEKDKAMKLYLDVLFSAQDLDIASEAAIRLSDHQMDAGKMKEAKEYLLKVLNVNAQYLLKDKEASYKLARRLFEHHLYDLAAKITDLLLENTPKKADNRELLLKESGDWHAKANEVEVAHARYQEYLADYKNSGEYVQEVTESLDELFFKLNENNETKLANYYDKLIETYNNEIGQKALLEKAKLLLKQKRYEEVLTLQKDLEKLPDRYEIKPEELIYEAAKSLALQELLKDECQNTVGLIEEYKLQLNEPQYEEKLFQCFMRVSRYDRAKEISDTHLKDAQLISRYAWSQKQVQVLFKMGKYQDALAFKEDLKTLSFTLREKIGLETIRDLFFSLTKLKNLEGAASLAESIKILYPDESSNLDIYYEIVKMANDAKNDLLLVTYAQTSIEMQKKFKSNALSPELEFMYIDALKRLGRDQEALTLAEGLLPQSLVPKDKIRLFYQAGELSLKLQDSNKAKSYFTQCVSINDNSSWKNICQQNLDLIP
SIO_010081: SJPD1_RS00915
subclass of: SO_0000673
so part of: SJPD1_RS00915
location: 165122..167518
location: region:165122-167518:1
so has part: feature:165122-167518:1:exon

WP_096045557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165122-167518:1:exon

SJPD1_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00920
old locus tag: SJPD1_0185
so part of: sequence
location: complement(167528..168946)
location: region:167528-168946:-1
so has part: feature:167528-168946:-1:exon
subclass of: SO_0000010

position:167528:-1
position: 167528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168946:-1
position: 168946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167528-168946:-1:exon

SJPD1_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00920
old locus tag: SJPD1_0185
inference: COORDINATES: protein motif:HMM:NF012398.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
translation: MKIINHNYINGEFINIDSNEKLTLKNPTTEQEIAQIFLSTPSEMNQAIECASKTFESFSQTSIDERMEILQRIHDELIKHEETLIDLAVLEFGATITTTRRRTKNAINLFLVIKEELKNYDFIKKDAYSLTRKEGVGVIGVIIPWNANLAHLCSNIAPAIALGCTLVIKPSEFNALETQAFLECLHKAKIPKGVVNVIQGTGEIVGEVLTKHPLVNAISFIGSTKTGKKIFENCSKTIKRMTLELGGKSPTILLEDANLQEVIPQVLSSAYSNSGQACHAGSRLLVPKSKLQEVENLLLQNIQKLKIGDPKREETQIGPMINQTQFNTVQSYIKSGIEDGAKLLCGGLGRAEGFQKGYFVKPTVFICTDETLKIVQEEIFGPVLCVLPYENEQEALQIANNTIFGLSAYVFSNDETKALAFANHIRTGRVLINTATSKAKTPPFGGMKQSGLGRMGGKYSMDAFCEIKSILF
SIO_010081: SJPD1_RS00920
subclass of: SO_0000673
so part of: SJPD1_RS00920
location: complement(167528..168946)
location: region:167528-168946:-1
so has part: feature:167528-168946:-1:exon

WP_096045558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167528-168946:-1:exon

SJPD1_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: miaA
locus tag: SJPD1_RS00925
old locus tag: SJPD1_0186
so part of: sequence
location: complement(168964..169860)
location: region:168964-169860:-1
so has part: feature:168964-169860:-1:exon
subclass of: SO_0000010

position:168964:-1
position: 168964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169860:-1
position: 169860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168964-169860:-1:exon

SJPD1_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: miaA
locus tag: SJPD1_RS00925
old locus tag: SJPD1_0186
EC number: 2.5.1.75
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014472885.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
translation: MKTIAILGPTASGKTALSIEFALKYNAHILSLDSLSIYQEIDIASAKPSLDERQGVHHYGMDVLSPSEHFDVTMFFDLYKEAHEASLREGKNLIIVGGTGFYLKAMMDGFSLKPEISLHVKEKIDQHLLNLEASYALILEYDRAYANKISSSDRYRIEKWLEIFLTTKQIPSLYLLNAKQEPLIKDIALYEIETPKESLAQKIALRTALMIKAGLIDEVFGLEKHYTRAPQCMKAIGIKEVLDYFDGRFKISGLEERITFNTLHLAKRQRTFNASQFPPHTQGDIKHLSNAIEAYFKS
SIO_010081: SJPD1_RS00925
subclass of: SO_0000673
so part of: SJPD1_RS00925
location: complement(168964..169860)
location: region:168964-169860:-1
so has part: feature:168964-169860:-1:exon

WP_096045559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168964-169860:-1:exon

SJPD1_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00930
old locus tag: SJPD1_0187
so part of: sequence
location: 169992..170861
location: region:169992-170861:1
so has part: feature:169992-170861:1:exon
subclass of: SO_0000010

position:169992:1
position: 169992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170861:1
position: 170861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169992-170861:1:exon

SJPD1_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00930
old locus tag: SJPD1_0187
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768384.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: menaquinone biosynthesis prenyltransferase MqnP
translation: MQQLWLKLKDISDLIVFKHSVFALPFIFVAMIVSSKAQSGTLWFGFKLLILGLLAAVSARNFAMAFNRYADRDIDKYNPRTADRPSVDGRIGSFNMQLFIALNAAIFIAVAYLINNLAFYLSVPILIILGGYSLFKRFSPYAHLVLGLSLGLAPIAGVVAIQESIPLWSILLSIGVMYWVAGFDLLYSLQDMEYDTANGLFSIPSRFGKEATFFISRLFHGQTILFWFLFALSANLGFFAYLGVLIAAIVLFFEHRIVQKDFSKIDRAFFTLNGYLGIIFFVFVFLDRI
SIO_010081: SJPD1_RS00930
subclass of: SO_0000673
so part of: SJPD1_RS00930
location: 169992..170861
location: region:169992-170861:1
so has part: feature:169992-170861:1:exon

WP_096045560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169992-170861:1:exon

SJPD1_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00935
old locus tag: SJPD1_0188
so part of: sequence
location: 170863..171393
location: region:170863-171393:1
so has part: feature:170863-171393:1:exon
subclass of: SO_0000010

position:170863:1
position: 170863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171393:1
position: 171393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170863-171393:1:exon

SJPD1_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00935
old locus tag: SJPD1_0188
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768385.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDIRFVPAFLKIVYEPGNVENTAFMQEYYTLLQLNDDPLGLWLKSSKVRKESEQSDQVLLTLLVELHRKIDKLTHLITSDTPLHLPLALEGNLKAIGHGYIEFDSNVLKPDENYYARIDMPTFPKRQMPLFFEALNESIGKIVMMHEDDEKDWSTYMVACERVMIRQMKGNQNEY
SIO_010081: SJPD1_RS00935
subclass of: SO_0000673
so part of: SJPD1_RS00935
location: 170863..171393
location: region:170863-171393:1
so has part: feature:170863-171393:1:exon

WP_096045561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170863-171393:1:exon

SJPD1_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00940
old locus tag: SJPD1_0189
so part of: sequence
location: 171383..171898
location: region:171383-171898:1
so has part: feature:171383-171898:1:exon
subclass of: SO_0000010

position:171383:1
position: 171383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171898:1
position: 171898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171383-171898:1:exon

SJPD1_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00940
old locus tag: SJPD1_0189
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855960.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIETLAFIALAALVVIIFLMVYIRDVEVNKKLLIYEKSIEELNYQNHVLNKTLGELTSTAKEPAVDMKALESKILGRVKEEIQQSVFPLVGSLKDVEKIMQNFRDEQSSRIDRLESRTKEMSFASSSPSSSNEKVIVSQYAKGRSEAEIAKDLRIGIGEVDLVLKLANLK
SIO_010081: SJPD1_RS00940
subclass of: SO_0000673
so part of: SJPD1_RS00940
location: 171383..171898
location: region:171383-171898:1
so has part: feature:171383-171898:1:exon

WP_096045562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171383-171898:1:exon

SJPD1_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00945
old locus tag: SJPD1_0190
so part of: sequence
location: complement(171948..173396)
location: region:171948-173396:-1
so has part: feature:171948-173396:-1:exon
subclass of: SO_0000010

position:171948:-1
position: 171948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173396:-1
position: 173396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171948-173396:-1:exon

SJPD1_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00945
old locus tag: SJPD1_0190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768387.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MKNFLTRYNDSKLALFALFLGVTIGICYANATEGIVTSSLLFGVAAGSFFSNRKTMECDTELYEKTLNVIREAAHGNLEPRVVNIDPNKPMGKIALEINDLLDQMEALMRETKTSIESASQGKTYRNIFNEGFRGLFAINAHYISEGVKGIIEGQKGKARGVLSSAFSDLGNGNNGVLSIQQDLSNSIKEMTQITKVSNMTAEKSNDSLDTVSALSSGIQELLELLTSTNEAITSLSERTSEISSVVNLIKDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKATQEIAMTIQTLQQETNGIHSNSDRISVIANASGDNVVHFEEALKAFNKDANDTADISYKLENKIFTILAKIDHIVYKTNAYSAVLNEKTDANFANHENCRLGKWYQDAITQEHFHNTKAYTLLAEPHKTVHQSVADNMQHLQNGYNADTLAFFINNFKKMENASTTLFSLLDQMIQESASECRSTRK
SIO_010081: SJPD1_RS00945
subclass of: SO_0000673
so part of: SJPD1_RS00945
location: complement(171948..173396)
location: region:171948-173396:-1
so has part: feature:171948-173396:-1:exon

WP_096045563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171948-173396:-1:exon

SJPD1_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00950
old locus tag: SJPD1_0191
so part of: sequence
location: complement(173362..173874)
location: region:173362-173874:-1
so has part: feature:173362-173874:-1:exon
subclass of: SO_0000010

position:173362:-1
position: 173362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173874:-1
position: 173874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173362-173874:-1:exon

SJPD1_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00950
old locus tag: SJPD1_0191
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855962.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MQKPIPNNKEHSVSADAFLVSKTDTHGKITYCNEPFIKIVGASEQEILGKPHNIIRHPDMPQIIFKLLWDKVKNKEEIFAYVKNLSFDGGHYWVYANITASTNQSGAIIGYYSVRRKANPKALAIIEPLYAKLLELEKTGGMEASFAYLTDLLNQKGASYEEFSNTLQRL
SIO_010081: SJPD1_RS00950
subclass of: SO_0000673
so part of: SJPD1_RS00950
location: complement(173362..173874)
location: region:173362-173874:-1
so has part: feature:173362-173874:-1:exon

WP_210394390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173362-173874:-1:exon

SJPD1_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: moaA
locus tag: SJPD1_RS00955
old locus tag: SJPD1_0192
so part of: sequence
location: 174004..174972
location: region:174004-174972:1
so has part: feature:174004-174972:1:exon
subclass of: SO_0000010

position:174004:1
position: 174004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174972:1
position: 174972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174004-174972:1:exon

SJPD1_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: moaA
locus tag: SJPD1_RS00955
old locus tag: SJPD1_0192
EC number: 4.1.99.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768389.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP 3',8-cyclase MoaA
translation: MLVDGFGRNVTYLRVSVTERCNFRCQYCMPEKPFSWVPKENLLNFEELFLFVKVAIDEGITKIRITGGEPLLRTDLDKFIAMINNHKSGLDLALTTNGFLLKEAASKLKKAGLQRVNISLDSLKADVAAKMAQKDVLAKVQAGIEEALKVGLKVKINMVPIKGINADEVLDVLEYAKARGMSIRFIEYMENTHAKEKLQGLSGQEVQDIIATKYHFNAIGRVGPSPAHLFELDDGYIFGIIDPHKHDFCEDCNRIRLTAEGMLIPCLYFDEAMSIKDAVHKGDVAGAAEILKEVLRNKPEKNKWSDDDQNETSTRAFYETGG
SIO_010081: SJPD1_RS00955
subclass of: SO_0000673
so part of: SJPD1_RS00955
location: 174004..174972
location: region:174004-174972:1
so has part: feature:174004-174972:1:exon

WP_096045564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174004-174972:1:exon

SJPD1_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00960
old locus tag: SJPD1_0193
so part of: sequence
location: complement(174954..176108)
location: region:174954-176108:-1
so has part: feature:174954-176108:-1:exon
subclass of: SO_0000010

position:174954:-1
position: 174954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176108:-1
position: 176108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174954-176108:-1:exon

SJPD1_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00960
old locus tag: SJPD1_0193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855964.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin molybdotransferase MoeA
translation: MPISYQEALKIIQTHIKPLHVNKTLPLLKAINHIASADVFAKFALPKYSMSLKEGYGIAFSMDKTVYTLLSPPYPNPIPLGYGVSLSTGERIPEGADTIIAEEDVVLEQENCIKIPLHVTQTQHIKKEGEDIAKGELLLKKCERISAQKITALSSQGITQIKTFQKTTVSILSIGNQLASGEIHNSNAMSLAARIIELGGKVDEIEICEEDETKILEKLKIFVQKSDCVITTGAMSRHDAMRYLLETKTVTPLFHHVRIAPAKPSALSLLENKPILHLPGLPLGCMLGFEMLGVPLLRQLQHQLCIIPDFITCINQKRVTCKDNCMSAIPGYSDGRNFICAPYYEAGRLNILSQCNGYTLMEDQESIEEGREIPFFYFTHPPVS
SIO_010081: SJPD1_RS00960
subclass of: SO_0000673
so part of: SJPD1_RS00960
location: complement(174954..176108)
location: region:174954-176108:-1
so has part: feature:174954-176108:-1:exon

WP_096045565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174954-176108:-1:exon

SJPD1_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00965
old locus tag: SJPD1_0194
so part of: sequence
location: 176189..176599
location: region:176189-176599:1
so has part: feature:176189-176599:1:exon
subclass of: SO_0000010

position:176189:1
position: 176189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176599:1
position: 176599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176189-176599:1:exon

SJPD1_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00965
old locus tag: SJPD1_0194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855965.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDELIRLSIQLHLLFIILLVVLIGLNIYLLKSDKTFLKLSKRLELIAPQYYIVLSAIFFTGIIVMAVQQFNFSFSVWIMILVWLLIVAFGIRGHKLYKRIERTEESQSAYKRYAIKKYSIDLLAVIVISILFYVVH
SIO_010081: SJPD1_RS00965
subclass of: SO_0000673
so part of: SJPD1_RS00965
location: 176189..176599
location: region:176189-176599:1
so has part: feature:176189-176599:1:exon

WP_096045566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176189-176599:1:exon

SJPD1_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00970
old locus tag: SJPD1_0195
so part of: sequence
location: 176601..177269
location: region:176601-177269:1
so has part: feature:176601-177269:1:exon
subclass of: SO_0000010

position:176601:1
position: 176601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177269:1
position: 177269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176601-177269:1:exon

SJPD1_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00970
old locus tag: SJPD1_0195
EC number: 2.1.1.193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768392.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
GO process: GO:0006364 - rRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (uracil(1498)-N(3))-methyltransferase
translation: MQFVYHPNAGVQTLSVDIREYEHIFKVRRMSVGEKLQWRNLKDVFLYEYEISTIGKKEAELDLIDKKEGPLLPSKILHVGWSIIDPKIIEKTLPMLNELGVSKISFVYAEFSQKSHKLDLERMKRILINSSQQCGRSLLMQIEVFPTLQDYIVAYPKSYILDFSETKLNETEKISSILIGPEGGLSQKERMLLQNQSIVGLTCNTILRSETAVVAAASKILA
SIO_010081: SJPD1_RS00970
subclass of: SO_0000673
so part of: SJPD1_RS00970
location: 176601..177269
location: region:176601-177269:1
so has part: feature:176601-177269:1:exon

WP_096045567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176601-177269:1:exon

SJPD1_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rpmE
locus tag: SJPD1_RS00975
old locus tag: SJPD1_0196
so part of: sequence
location: 177367..177567
location: region:177367-177567:1
so has part: feature:177367-177567:1:exon
subclass of: SO_0000010

position:177367:1
position: 177367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177567:1
position: 177567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177367-177567:1:exon

SJPD1_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rpmE
locus tag: SJPD1_RS00975
old locus tag: SJPD1_0196
inference: COORDINATES: similar to AA sequence:RefSeq:YP_002343615.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MKKDIHPEYVPCVVTCACGNSFETMSNKAELRIDICSSCHPFFTGSEKIVDAAGRVEKFKKKYSLK
SIO_010081: SJPD1_RS00975
subclass of: SO_0000673
so part of: SJPD1_RS00975
location: 177367..177567
location: region:177367-177567:1
so has part: feature:177367-177567:1:exon

WP_025343427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177367-177567:1:exon

SJPD1_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rsmI
locus tag: SJPD1_RS00980
old locus tag: SJPD1_0197
so part of: sequence
location: 177580..178392
location: region:177580-178392:1
so has part: feature:177580-178392:1:exon
subclass of: SO_0000010

position:177580:1
position: 177580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178392:1
position: 178392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177580-178392:1:exon

SJPD1_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rsmI
locus tag: SJPD1_RS00980
old locus tag: SJPD1_0197
EC number: 2.1.1.198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855968.1
GO function: GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
translation: MIYFIPTPIGNLDDISVRSLKLLAECKTLFCEDTRITKRLLSLLSQKHNLEFQIKNFISMHSHNEDTVLSTIDKKIFEETVGYLSDAGMPGISDPGAALVRFCQNNELSYEILPGSNAALLAYVTSGIETHQFLFYGFLSHKGMDRQNELFEALNSPYAVIVYESPHRIEKLFEELAQFAPNRQIFAIKEATKLYEKRFLGTALEVQEASKKANLKGEWVIVIAPEIHLGGEAITKEDLIDLDVPPKQKAKLLSKLTGESIKEWYTKLQN
SIO_010081: SJPD1_RS00980
subclass of: SO_0000673
so part of: SJPD1_RS00980
location: 177580..178392
location: region:177580-178392:1
so has part: feature:177580-178392:1:exon

WP_096045568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177580-178392:1:exon

SJPD1_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rlmB
locus tag: SJPD1_RS00985
old locus tag: SJPD1_0198
so part of: sequence
location: 178484..179167
location: region:178484-179167:1
so has part: feature:178484-179167:1:exon
subclass of: SO_0000010

position:178484:1
position: 178484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179167:1
position: 179167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178484-179167:1:exon

SJPD1_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rlmB
locus tag: SJPD1_RS00985
old locus tag: SJPD1_0198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855969.1
GO function: GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO process: GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
translation: MIIYGKQLFLHLLNHYPSRIETVFLPKKCDPKLFSQIARVTQNICTIDERKAQALCHGGNHQGFIAEIKDLELVSFNEIKHGSFLVILDEVTDVGNIGAIVRSAYAFGADGLILSGMKTCNLEAILRTSSAAAFELPIALCPSTRDMLNELKQIGFTLYGADMGGIDVKEVTFAPKRVLIMGSEGKGLSPKVKERLDTIVSIKMARAFDSLNVSAAAAVLCDRIANG
SIO_010081: SJPD1_RS00985
subclass of: SO_0000673
so part of: SJPD1_RS00985
location: 178484..179167
location: region:178484-179167:1
so has part: feature:178484-179167:1:exon

WP_096045569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178484-179167:1:exon

SJPD1_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00990
old locus tag: SJPD1_0199
so part of: sequence
location: 179160..180086
location: region:179160-180086:1
so has part: feature:179160-180086:1:exon
subclass of: SO_0000010

position:179160:1
position: 179160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180086:1
position: 180086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179160-180086:1:exon

SJPD1_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00990
old locus tag: SJPD1_0199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855970.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNDIRVLEKIGLQEVCKRTHIEVKQLEYMINNQYDKLNKINTLGFVKILSREYKLDLTDWLEGFYDYWAAHKAEDDSHKEKIFIHVKSDRPYKKGAWIFLVLVLISGVFGLFSIFKIDINFDIMNLLDKTKIETNQTSAFQSTPVVQATATSLGVKVEERVVDTNSSNSTTEAVVVSIDENLTRKTESNDTNSAVSSPIPTLIESNTTLVKDVPKNSAIIIPTKRIWVGFVNLETFTRKESTSDQNITIDLTKRQIIKTGNGFFKLSYDGSVEDFTEQGSTRFLVEEGTMKKISEEKFIELNRGKNW
SIO_010081: SJPD1_RS00990
subclass of: SO_0000673
so part of: SJPD1_RS00990
location: 179160..180086
location: region:179160-180086:1
so has part: feature:179160-180086:1:exon

WP_096045570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179160-180086:1:exon

SJPD1_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS00995
old locus tag: SJPD1_0200
so part of: sequence
location: 180083..180733
location: region:180083-180733:1
so has part: feature:180083-180733:1:exon
subclass of: SO_0000010

position:180083:1
position: 180083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180733:1
position: 180733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180083-180733:1:exon

SJPD1_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS00995
old locus tag: SJPD1_0200
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLLIILILSLSLFGAQTLQDKIKSFVGPTKYETQKNLIQVLFAQSSNFTKPNGEVDSVKVISVLKKNGLLQLLYDKPIQLRLAFRTQSDPLIFLKIINESLEAMGYNYFLTSNALRDSAGFVWEIYLQTEHIVDPESFAGALVARGCNITNIVKNDDNYWFYDIDSSNAYLGAKKLESGVTTPLGKPLKPYWIDVKNLKEITVTVHSGIDGFQM
SIO_010081: SJPD1_RS00995
subclass of: SO_0000673
so part of: SJPD1_RS00995
location: 180083..180733
location: region:180083-180733:1
so has part: feature:180083-180733:1:exon

WP_226372217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180083-180733:1:exon

SJPD1_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01000
old locus tag: SJPD1_0201
so part of: sequence
location: 180911..182122
location: region:180911-182122:1
so has part: feature:180911-182122:1:exon
subclass of: SO_0000010

position:180911:1
position: 180911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182122:1
position: 182122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180911-182122:1:exon

SJPD1_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01000
old locus tag: SJPD1_0201
EC number: 2.6.1.83
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768397.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LL-diaminopimelate aminotransferase
translation: MFDEIRFNTIDRLPGYVFAEINELKLAARHAGDDIIDFSMGNPDGRTPQHIIDKLVESAQKDGTHGYSVSKGIYKLRLAICNWYLRKYGVTLDPNTEAVATLGSKEGFVHLAQAIMNPGDVAVVPDPAYPIHAYAFMIAGGNVHKFGIDYNEKYELDKVQFFAKLKKVFKESAPKPKFVVVNFPHNPTCVTTDVAFYEELVAYAKEERFYIISDIAYADLSFDGYETPSIFQVEGAKDVAVECYTLSKSYNMAGWRVGFVVGNKKLVGALQKIKSWFDYGMFTPIQVASTVALDGPQECVDEIRETYHKRRDILVESFNNAGWPMEKPKSTMFVWAKIPKVAAHLGSMEFAKQLLQEAKIAVSPGIGFGESGEGYVRIALIENENRIRQAARNIKKYLKSLEG
SIO_010081: SJPD1_RS01000
subclass of: SO_0000673
so part of: SJPD1_RS01000
location: 180911..182122
location: region:180911-182122:1
so has part: feature:180911-182122:1:exon

WP_096045571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180911-182122:1:exon

SJPD1_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01005
old locus tag: SJPD1_0202
so part of: sequence
location: 182126..183397
location: region:182126-183397:1
so has part: feature:182126-183397:1:exon
subclass of: SO_0000010

position:182126:1
position: 182126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183397:1
position: 183397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182126-183397:1:exon

SJPD1_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01005
old locus tag: SJPD1_0202
EC number: 1.1.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855973.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homoserine dehydrogenase
translation: MIKVGIIGVGTVGSHVIKILQENEDIITARSGKKIVPIMGVVKDITKKRDVNIPLSSDVNDILENPDVDIVVELMGGVDEAYKIVTHALKNKKAVVTANKALLAYHRYELRDLAGTIPIGYEASVAGGIPIIKALREGLSANHIEAIKGIMNGTCNFILTKMMNEKAEFADVLREAQALGYAEADPTFDVGGFDAAHKLLILASIAYGIDVKPEEILIEGIEHINSEDIYFAKEFGYNIKLLAIAKKSSDKVELRVHPALVPIKQMIAKVDGVMNGISVIGDRVGETMYYGPGAGGSATASAVVSDLIDIARHTQNSPMLGFIKPLEKSGLTLMNKDEIYTQYYIRVTVVDRIGVLSKISEILGKHSISISSFLQKQVAYKNESAVLLFSTHICKEKDIQKAIQELSELPFVELKPAMIRIES
SIO_010081: SJPD1_RS01005
subclass of: SO_0000673
so part of: SJPD1_RS01005
location: 182126..183397
location: region:182126-183397:1
so has part: feature:182126-183397:1:exon

WP_096045572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182126-183397:1:exon

SJPD1_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01010
old locus tag: SJPD1_0203
so part of: sequence
location: 183397..183723
location: region:183397-183723:1
so has part: feature:183397-183723:1:exon
subclass of: SO_0000010

position:183723:1
position: 183723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183397-183723:1:exon

SJPD1_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01010
old locus tag: SJPD1_0203
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002848396.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YraN family protein
translation: MGLQEGLEAENKASFFLEKEGYTLLARNFHSKFGEIDIIALKDNILHFCEVKFSEKYDPILRITATKMTKIIKTIKYYLLRHPNSYDYQIDAILVTPEKIEIIKNISY
SIO_010081: SJPD1_RS01010
subclass of: SO_0000673
so part of: SJPD1_RS01010
location: 183397..183723
location: region:183397-183723:1
so has part: feature:183397-183723:1:exon

WP_096045573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183397-183723:1:exon

SJPD1_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: trxA
locus tag: SJPD1_RS01015
old locus tag: SJPD1_0204
so part of: sequence
location: 183809..184129
location: region:183809-184129:1
so has part: feature:183809-184129:1:exon
subclass of: SO_0000010

position:183809:1
position: 183809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184129:1
position: 184129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183809-184129:1:exon

SJPD1_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: trxA
locus tag: SJPD1_RS01015
old locus tag: SJPD1_0204
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004318041.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin
translation: MGKYIELNASNFDSTVADGVALVDFWAPWCGPCRMIAPVIEELASDFDGKAKICKVNTDEEQDVAIKYGIRSIPTILFFKNGELVDQMIGASSKQVLADKVNSLLK
SIO_010081: SJPD1_RS01015
subclass of: SO_0000673
so part of: SJPD1_RS01015
location: 183809..184129
location: region:183809-184129:1
so has part: feature:183809-184129:1:exon

WP_087437491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183809-184129:1:exon

SJPD1_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: trxB
locus tag: SJPD1_RS01020
old locus tag: SJPD1_0205
so part of: sequence
location: 184253..185185
location: region:184253-185185:1
so has part: feature:184253-185185:1:exon
subclass of: SO_0000010

position:184253:1
position: 184253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185185:1
position: 185185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184253-185185:1:exon

SJPD1_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: trxB
locus tag: SJPD1_RS01020
old locus tag: SJPD1_0205
EC number: 1.8.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768401.1
GO function: GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin-disulfide reductase
translation: MLDLAIIGGGPAGLSAGLYATRGGLKNVVMFEKGLPGGQITSSSEIENYPGSAEILSGLDFMAPWSEQCMRFGLKHAMEEVTRVSKNEDGTFQIDLAGGKSEQAKSVIVCTGSTPKKANFEGEAELFGKGVSTCATCDGFFYKNREVVALGGGDTALEEALYLSHICSKVYLVHRRDTFRASPSTIEKVKNNPKIELVLNVTVKKAYGDKMGLNGIIVVDNSGNERDIVVPGVFVFVGMNVNNTILKQEDGNFLCEMDENGNVVVDLSMKTSVKGLFAAGDLRTKASKQVVCAAGDGATAGIQALEYVNH
SIO_010081: SJPD1_RS01020
subclass of: SO_0000673
so part of: SJPD1_RS01020
location: 184253..185185
location: region:184253-185185:1
so has part: feature:184253-185185:1:exon

WP_096045574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184253-185185:1:exon

SJPD1_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: dapB
locus tag: SJPD1_RS01025
old locus tag: SJPD1_0206
so part of: sequence
location: 185204..185971
location: region:185204-185971:1
so has part: feature:185204-185971:1:exon
subclass of: SO_0000010

position:185204:1
position: 185204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185971:1
position: 185971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185204-185971:1:exon

SJPD1_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: dapB
locus tag: SJPD1_RS01025
old locus tag: SJPD1_0206
EC number: 1.17.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004510977.1
GO function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-tetrahydrodipicolinate reductase
translation: MIHVGIHGSTGRVGRLLIDNLIKDKEAKPYVLHAIEEFSFTPPKDAVVTDDVLTLLQKSDVVIDFTISIGTETLLENALKHPTPLVIGTTGLNEHQHNLLKEAANNMPILYSTNMSLGVAVLNRLVELASKSLSDFDIEIVEQHHRFKKDAPSGTALTLGEHAARGRGLNLDDVRISGRNGLIGERSKDEIAIMALRGGDIVGRHTVGFYNDGEFIEMNHTATSRDTFAKGAIKAAKWIINQPNGLYTISDCLGL
SIO_010081: SJPD1_RS01025
subclass of: SO_0000673
so part of: SJPD1_RS01025
location: 185204..185971
location: region:185204-185971:1
so has part: feature:185204-185971:1:exon

WP_096045575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185204-185971:1:exon

SJPD1_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: purF
locus tag: SJPD1_RS01030
old locus tag: SJPD1_0207
so part of: sequence
location: 185991..187328
location: region:185991-187328:1
so has part: feature:185991-187328:1:exon
subclass of: SO_0000010

position:185991:1
position: 185991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187328:1
position: 187328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185991-187328:1:exon

SJPD1_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: purF
locus tag: SJPD1_RS01030
old locus tag: SJPD1_0207
EC number: 2.4.2.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002777919.1
GO function: GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidophosphoribosyltransferase
translation: MCAIVGVFDVKHASKIAYYALFAMQHRGQEATGISASDGKKIRTIKDNGLVTEVFNEGKLAFLHGDMAIGHNRYSTAGSDSVKDAQPVAASYKLGDISIVHNGNLINKHEVRSKLVEQGAIFQSSMDTENIIHLIARSQQGKLKDRIVEALNVIKGAYCLLIQSRSKMFAIRDRYGVRPLSIGKMKEGGYIVASETCALDLVDAEFVRDVRPGEMVIFQQGKEEFESIQLFEPDPHICAFEFIYFARPDSVIEGKNVYAARKKMGMKLAELAPVEADLVIPVPDSGVSAALGYAQASGIPFEMAIVRNHYVGRTFIEPTQAVRDLKVKLKLSPIHKILEGKKIVVIDDSIVRGTTSRQIVKLLKRAGAAEVHMRIASPTIEHPCLYGIDTPSYKELISANKSVEEVREYIEADSLAFLSIDALKESIGNDMNYSLVSFDGNYFIK
SIO_010081: SJPD1_RS01030
subclass of: SO_0000673
so part of: SJPD1_RS01030
location: 185991..187328
location: region:185991-187328:1
so has part: feature:185991-187328:1:exon

WP_096045576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185991-187328:1:exon

SJPD1_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01035
old locus tag: SJPD1_0208
so part of: sequence
location: 187328..188281
location: region:187328-188281:1
so has part: feature:187328-188281:1:exon
subclass of: SO_0000010

position:188281:1
position: 188281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187328-188281:1:exon

SJPD1_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01035
old locus tag: SJPD1_0208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855979.1
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR01212 family radical SAM protein
translation: MREILTAGRYFRGKFGETIYKIPVSISGFTCPNIDGTVARGGCIFCENESFSPNLEHKQPKRFYLHPTSENPYLEFQLIQLEAQYKKTKKVLSKKFGAQKFIIYFQSFTNTYAPLATLKTLYTKALSFEGVVGLSIGTRTDSVTEEVIAYLAELSKEREIWLEYGVQSSSDETLKRINRGHDSANIEKYITLSRQYGLKICAHVIFGLPGETPEMALESVKFALRLGVKSFKFHPLYVVKRTALANDLNRGDFIPISEESYIQTIIKAIKLLPEGVILQRVSAGIEDATLLSPSWCYTKHQQMFNIREALKKEGLLY
SIO_010081: SJPD1_RS01035
subclass of: SO_0000673
so part of: SJPD1_RS01035
location: 187328..188281
location: region:187328-188281:1
so has part: feature:187328-188281:1:exon

WP_096045577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187328-188281:1:exon

SJPD1_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01040
old locus tag: SJPD1_0209
so part of: sequence
location: complement(188297..188836)
location: region:188297-188836:-1
so has part: feature:188297-188836:-1:exon
subclass of: SO_0000010

position:188297:-1
position: 188297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188836:-1
position: 188836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188297-188836:-1:exon

SJPD1_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01040
old locus tag: SJPD1_0209
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768404.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2393 family protein
translation: MTYFTLLHWFILILILLIFSLILMLTIRNHDGKSSLFAPIIANIFIMAIFAFFAIYGLDKYTKVARLENITQKKVLINESFSISGQIRNIGNFQIGKCILEVKISNELGDSAGSGSIVFEPKSAFDNLFSKDSSSSVDTTKEFVIAENLHKNEMRNFTVFMRYPPSFSKPYIRYELFCH
SIO_010081: SJPD1_RS01040
subclass of: SO_0000673
so part of: SJPD1_RS01040
location: complement(188297..188836)
location: region:188297-188836:-1
so has part: feature:188297-188836:-1:exon

WP_096045578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188297-188836:-1:exon

SJPD1_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01045
old locus tag: SJPD1_0210
so part of: sequence
location: complement(188847..189383)
location: region:188847-189383:-1
so has part: feature:188847-189383:-1:exon
subclass of: SO_0000010

position:188847:-1
position: 188847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189383:-1
position: 189383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188847-189383:-1:exon

SJPD1_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01045
old locus tag: SJPD1_0210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855981.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2393 family protein
translation: MNTDALKLSLLTYIKHFGLYDYLAFSWLFFTFIILIILASLVARRSSTASLLLVIFALLLLVISPFFIKEKLEETFRTTTTEITMVKKLTFSASLIVEGNIYNKSTKNFSLCLIRTSIFKQTGAQGFKAYLNSLKPISNQSILITKDLLKEDSMEYQAVFDGFEYNGDVFATLKAECY
SIO_010081: SJPD1_RS01045
subclass of: SO_0000673
so part of: SJPD1_RS01045
location: complement(188847..189383)
location: region:188847-189383:-1
so has part: feature:188847-189383:-1:exon

WP_096045579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188847-189383:-1:exon

SJPD1_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: hisIE
locus tag: SJPD1_RS01050
old locus tag: SJPD1_0211
so part of: sequence
location: complement(189373..190056)
location: region:189373-190056:-1
so has part: feature:189373-190056:-1:exon
subclass of: SO_0000010

position:189373:-1
position: 189373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190056:-1
position: 190056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189373-190056:-1:exon

SJPD1_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: hisIE
locus tag: SJPD1_RS01050
old locus tag: SJPD1_0211
EC number: 3.5.4.19
EC number: 3.6.1.31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855982.1
GO function: GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
translation: MSSTLIHSIDWNASPLLPVVAQDVKSGEVLMLAYMNQEALSLTLQTGLAHYYSRSRQSLWKKGETSGHVQHVKEAYLDCDSDTLLLKVEQEGVACHTGRMSCFFNRIDVEETPKKPAQEIAAYSISDKIYHIIQERKKADPKTSYVASLLHKGDNSILKKVVEEAGEFCFAFKDNDNKEIIYEAADLMFHALVALGAKNIHPSLISKELERRFGLSGIEEKNSRNEH
SIO_010081: SJPD1_RS01050
subclass of: SO_0000673
so part of: SJPD1_RS01050
location: complement(189373..190056)
location: region:189373-190056:-1
so has part: feature:189373-190056:-1:exon

WP_096045580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189373-190056:-1:exon

SJPD1_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01055
old locus tag: SJPD1_0212
so part of: sequence
location: complement(190053..191141)
location: region:190053-191141:-1
so has part: feature:190053-191141:-1:exon
subclass of: SO_0000010

position:190053:-1
position: 190053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191141:-1
position: 191141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190053-191141:-1:exon

SJPD1_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01055
old locus tag: SJPD1_0212
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPFH domain-containing protein
translation: MPADLNDYFKKKNGGGSSSNGDNDNRTPFNIEPPDFMKNLGKKAGILYVLIAIIVIAVIAKPFVIINSGEMGIKATTGKFEPIPMEPGFHLFIPFIQQVFIVDTKVRIMNYSSSEDLGEVLQRGSGIKKNAAISVLDARGLPVSIELTVQYKLEPTTAPQTIATWGMAWEDKIINPVVRDVTRAVVGKFNAEELPQRRNEIAVNIEEGIRKAIDAQPGKPVELLTMQLREILLPAKIKEQIEKVQVAKQEVERTRYEVEIANQQALKRAAEAEGQAKARQINAQGEANAVKIEADADAYANKKISESISDPLLKLRQIEVQGKFNEALKENKDAKIFLTPGGSTPNIWVDTKDSQKAVSISK
SIO_010081: SJPD1_RS01055
subclass of: SO_0000673
so part of: SJPD1_RS01055
location: complement(190053..191141)
location: region:190053-191141:-1
so has part: feature:190053-191141:-1:exon

WP_096045581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190053-191141:-1:exon

SJPD1_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01060
old locus tag: SJPD1_0213
so part of: sequence
location: complement(191232..192146)
location: region:191232-192146:-1
so has part: feature:191232-192146:-1:exon
subclass of: SO_0000010

position:191232:-1
position: 191232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192146:-1
position: 192146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191232-192146:-1:exon

SJPD1_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01060
old locus tag: SJPD1_0213
EC number: 2.6.1.42
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768408.1
GO function: GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO process: GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid transaminase
translation: MDKAKYIWMDGKLVAWDDAKIHILTHTLHYGNGVFEGTRAYMTDNGLAIFKLKEHTKRLLNSAKITRIKATYSQEELEAAHIELLKSNNFTSNVYIRPLIYLGYGVMGLNLAQAPVNTAIAAWQWGSYLGDDGIENGIRVKISSFARNPVSANMGKAKAAANYLNSQMAKYEALEAGYEEALLLDEDGFIAEGSGECFFIVRDGKLISPPNDTSLESITQATVLELAREAGIPIERRRITRDEAYISDEAFFTGTAAEVTPIKDIDNYIIGDGKRGPITKQLQEAYFDVVYGRNPKYKHFLTFI
SIO_010081: SJPD1_RS01060
subclass of: SO_0000673
so part of: SJPD1_RS01060
location: complement(191232..192146)
location: region:191232-192146:-1
so has part: feature:191232-192146:-1:exon

WP_096045582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191232-192146:-1:exon

SJPD1_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01065
old locus tag: SJPD1_0214
so part of: sequence
location: 192357..193775
location: region:192357-193775:1
so has part: feature:192357-193775:1:exon
subclass of: SO_0000010

position:192357:1
position: 192357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193775:1
position: 193775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192357-193775:1:exon

SJPD1_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01065
old locus tag: SJPD1_0214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008335656.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
translation: MKAKLYFGSTCKDKKECKEVCSPYDGRVVSSFCLCDATDAKEVLEIARTAALHVKQIPLHQRTNWLLDVAQKLEIERERIALCITDEVGKPIAFSRVEVDRCIETIKLSANAMLHVNGESFDTTAMPSGKKSLSFYKREPVGVVLAITPFNFPLNLVAHKIAPALVAGNAVILKPTSQAPRTAYELVKLFIESPYAPKDALSLLYSGEGVNETLITSEIPRVISFTGSVSVGREITQKAGIKKVSLELGGNAATYIDASADLVLAAKRCAVGAFINSGQVCISLQRIYVHESIYEPFAQALVEETKSLHVGSPYDEKTFIGPMVNEAAVLKAKRWIQSAIDEGAKPLCGFTCKALLFEPTIMADVSEAMAIVCEEVFAPIVSLIKVKDYEEAKTKMNASDYGLQYSIFCNDLSIVQRAIDELEAGGIVINDIPTLRFDLQPYGGIKQSGVGKEGPYFALLDDYTQIKSVVIC
SIO_010081: SJPD1_RS01065
subclass of: SO_0000673
so part of: SJPD1_RS01065
location: 192357..193775
location: region:192357-193775:1
so has part: feature:192357-193775:1:exon

WP_096045583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192357-193775:1:exon

SJPD1_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: bcp
locus tag: SJPD1_RS01070
old locus tag: SJPD1_0215
so part of: sequence
location: 193799..194263
location: region:193799-194263:1
so has part: feature:193799-194263:1:exon
subclass of: SO_0000010

position:193799:1
position: 193799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194263:1
position: 194263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193799-194263:1:exon

SJPD1_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: bcp
locus tag: SJPD1_RS01070
old locus tag: SJPD1_0215
EC number: 1.11.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855985.1
GO function: GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin-dependent thiol peroxidase
translation: MIKIGDKAPALSLPNQDNVEISLRDLEGKWIVLYFYPKDSTPGCTTEACDFTAALPSLEGLNAVVLGISPDSTASHQKFIAKQKLEITLLSDVSTEVAQRYGVWQLKKFCGKEYMGIVRSTFLIDPSGKIAKLWSNVKVKDHASEVKKVLETLI
SIO_010081: SJPD1_RS01070
subclass of: SO_0000673
so part of: SJPD1_RS01070
location: 193799..194263
location: region:193799-194263:1
so has part: feature:193799-194263:1:exon

WP_096045584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193799-194263:1:exon

SJPD1_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01075
old locus tag: SJPD1_0216
so part of: sequence
location: complement(194329..195666)
location: region:194329-195666:-1
so has part: feature:194329-195666:-1:exon
subclass of: SO_0000010

position:194329:-1
position: 194329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195666:-1
position: 195666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194329-195666:-1:exon

SJPD1_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01075
old locus tag: SJPD1_0216
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: cytochrome C
translation: MNKLLHKTVCTVIFLLTFGMTSAYAIPSFARQTGLDCAQCHTVFPELTPTGRYFKLHGYTMTNDQKTSPLDNLSGMVQLSYTQNANTTTNPDQIDPAKDKKLSLDQASLFYGGKIIDDLGAFIQVTYDGTNLIGSQSTNDVAHHIVADNVDIRYVKDFTLGENDLLVGLTLNNNPSMQDIYNTTPTWTFPYSSSANVNSPVSTLIDGGLGQKVAGLGVYAMLNDFLYAEVAGYQSNRSGGPLHILRYNPLYSDTNEVHGTALYTRVALQKTIGEHFFMVGGYTLNSKMDPDVTAPTGLYDRYDDKAIDAQYSYTNGSNMVTVMATRIREKTTLNNSFGSLSDNLNNTLTTTRGKISYYYDQKYGATVGAFTTDGTADATLYGSSNGLPDSSGKIFELDYLPIQKVKISLQYTMYDKFNGAKDNYDGAGRNAKDNNNVFLTAWIMF
SIO_010081: SJPD1_RS01075
subclass of: SO_0000673
so part of: SJPD1_RS01075
location: complement(194329..195666)
location: region:194329-195666:-1
so has part: feature:194329-195666:-1:exon

WP_096045585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194329-195666:-1:exon

SJPD1_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01080
old locus tag: SJPD1_0217
so part of: sequence
location: complement(195729..196958)
location: region:195729-196958:-1
so has part: feature:195729-196958:-1:exon
subclass of: SO_0000010

position:195729:-1
position: 195729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196958:-1
position: 196958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195729-196958:-1:exon

SJPD1_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01080
old locus tag: SJPD1_0217
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MLDEHLTEDSEQIKFLLDNNIYSSTSLKRILFEEYWLKITKNDTLLYVSDIANSIAIPPEKIADRTTLTVKTNQINFTADYDVIFRLHVKHYDDGTTIILGISMDNSIKQNQKKLATIFIITLIIISALFYYLVNFLLKPLVSISLTLRRLSQEKFSLGLVQESNDEIGFLIESINLTFEKLRNHFTYQKDFLSIMSHELKTPLSVIKNHIENAIEREDIPLVMKEKFSNDLEQISKLNQFIHRLMLLTRLEDKTIIPKSIRFNLSELAHELCQFFTDLAESQNKVFTSEISNQIFIVGDKGLIYRAIFNIVDNAIKYTPEEKEIHLILKCIDPKTAILQIRDQGEGISEEVIMTAESSMFSKSIYDQDGIKNGIGMRLIIAILNLHTLKYKIQSTQNGSIFTIFFKIA
SIO_010081: SJPD1_RS01080
subclass of: SO_0000673
so part of: SJPD1_RS01080
location: complement(195729..196958)
location: region:195729-196958:-1
so has part: feature:195729-196958:-1:exon

WP_096045586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195729-196958:-1:exon

SJPD1_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01085
old locus tag: SJPD1_0218
so part of: sequence
location: complement(197063..197725)
location: region:197063-197725:-1
so has part: feature:197063-197725:-1:exon
subclass of: SO_0000010

position:197063:-1
position: 197063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197725:-1
position: 197725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197063-197725:-1:exon

SJPD1_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01085
old locus tag: SJPD1_0218
inference: COORDINATES: protein motif:HMM:NF012301.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MKILIIEDDIELLKNLADSLKQDCFTVVTAQTGKMALQKYTEDVFDLVLLDLNLPDMDGIDILEKIRKGKVPSVHVLILTAKYELEDKVIGLDAGADDYLAKPFSMVELKARIRAILRRSSTNKQIKLHINNIEINIAERKVLKDDTEINLTPKEFSILELFFYNKNSILTPTQIAEHIYTDYFDKSSHIINMHIKNIRTKLQNQTIIETIRGVGFRLNS
SIO_010081: SJPD1_RS01085
subclass of: SO_0000673
so part of: SJPD1_RS01085
location: complement(197063..197725)
location: region:197063-197725:-1
so has part: feature:197063-197725:-1:exon

WP_096045587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197063-197725:-1:exon

SJPD1_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01090
old locus tag: SJPD1_0219
so part of: sequence
location: complement(197728..200607)
location: region:197728-200607:-1
so has part: feature:197728-200607:-1:exon
subclass of: SO_0000010

position:197728:-1
position: 197728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200607:-1
position: 200607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197728-200607:-1:exon

SJPD1_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01090
old locus tag: SJPD1_0219
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855986.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF748 domain-containing protein
translation: MLKKCLKSVLFWLIFLPAFYTLSGFIILPWWAQTKLPTLLQEKLGLSISIEKVLFNPFTFELHVNNLALHDTNGSSVVSLEHLYVNYEPTSLFKKEFFIQSLLLDKPFVDLKIDPNGNLALLSIFPKSSTDDNLTTHDNSLVMPFIIEHVEIQNAQSTFTDERPNIPFKFDIGPINYTVNNLSFYKDDLSIHALKVMFQNEEKISIASSASFEPLKFYGELNIVRLPLSNFWKYALPTIPVTLTQGELSLRVPFSIDLSKEKPLVSLEKASASLDSVRLVDNENKPVIEVPSFNLETIDFDLQTSNISIEKATITKPFVDIQLEKDYTLNLVRLFTPKSPSTQVKVQSSAKQETNNTWKFALKTLEVKEATVDVRDQNVKSAPAHFAPLKLTAQNITQDMNNPITYDFNSTLDTTATLNFKGTFIPATASLDIAINANKLSLEKAQPYIALYTTTLIQDGALSLNSKIKASFDKQTTFKIEGDATVSKFSLADKFRNSLVAWETLNFSNFSYTLSPSTLSIQNIALDKPYINLDIKKDGTTNFSNLLKTSSTPSKAPSKMKKTSPAKNEAMAIFIGNIVLKRGTTHFKDASLLLPFATFADRLNGSMSTLDTKNTKPSVLKLEGKVDKYGYAKIDGSVLPFDLKNRANLKILFKNIDMPSLSPYSGKFVGYAIKEGKLSMDLNYKIKKGLMEGANKINLDSLTLGDKIESADATNLPLGLAIAILKDSKGQIDIDLPVSGDLNDPEFRYGSIVWKAIGNLIGSIATSPFKLLGSILGIETENLKSIDFAAGEYALIDSEEEKMAQYQQILEKRSELNLIVTPSFNETLDTKALQEQNVTAQIEAMTPKKSKEDDSYSKAIKKLFIQKYSSDDYNKLLKSYKDENLDIGAINDNLISKIAENIIIAPEALQNLALKRSDTIIQTMITKHKIAPARLIKNEPKASDAIRDEWVGCEITVRN
SIO_010081: SJPD1_RS01090
subclass of: SO_0000673
so part of: SJPD1_RS01090
location: complement(197728..200607)
location: region:197728-200607:-1
so has part: feature:197728-200607:-1:exon

WP_096045588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197728-200607:-1:exon

SJPD1_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01095
old locus tag: SJPD1_0220
so part of: sequence
location: 200753..201841
location: region:200753-201841:1
so has part: feature:200753-201841:1:exon
subclass of: SO_0000010

position:200753:1
position: 200753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201841:1
position: 201841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200753-201841:1:exon

SJPD1_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01095
old locus tag: SJPD1_0220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855987.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: epoxyqueuosine reductase QueH
translation: MLVHICCSVDSHFFLQRLQKSYPDETLIGFFYDPNIHPFSEYKLRLLDVKRSCDKLGIALHVGDYNYEGWLEAVRGLENEPEKGKRCSVCFDNRLEETAQKALEIGEKTITTTLLTSPKKSLEQLEKALRVIAQKYELEIVAPDFRKGGGTQEQFTQAKEAMLYHQNYCGCLFALGVQREQQQKWADELSSPLRPQILPASIEERIVLYEKVIELEANETPFKLVREKFLNYRLLRAWVKNSDKKIIPSYVLFYSTCKKEFTKTNVEFVAQGVGFLAKEEARFISLKTFNTLANTDYKTLKEMLQNPPTVEIEIAFRNTYLKSIVASLTPLVVLDEVKMDSYELFIQSKTYQDIRENLVLIG
SIO_010081: SJPD1_RS01095
subclass of: SO_0000673
so part of: SJPD1_RS01095
location: 200753..201841
location: region:200753-201841:1
so has part: feature:200753-201841:1:exon

WP_096045589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200753-201841:1:exon

SJPD1_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: fabZ
locus tag: SJPD1_RS01100
old locus tag: SJPD1_0221
so part of: sequence
location: 201873..202322
location: region:201873-202322:1
so has part: feature:201873-202322:1:exon
subclass of: SO_0000010

position:201873:1
position: 201873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202322:1
position: 202322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201873-202322:1:exon

SJPD1_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: fabZ
locus tag: SJPD1_RS01100
old locus tag: SJPD1_0221
EC number: 4.2.1.59
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855988.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-hydroxyacyl-ACP dehydratase FabZ
translation: MLIDVVEIQKILPHRFPFLLVDRITALTPGESIEGFKNITIGEQIFQGHFPDHPIYPGVMIIEGMAQAGGVLAFKSMDEEKQEDTKEKVVYFMSIDNAKFRSPVKPGDQLVYKLNVLKHRGNIWVLDAKAYVDDKLVAEAELKAMIVDK
SIO_010081: SJPD1_RS01100
subclass of: SO_0000673
so part of: SJPD1_RS01100
location: 201873..202322
location: region:201873-202322:1
so has part: feature:201873-202322:1:exon

WP_096045590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201873-202322:1:exon

SJPD1_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: lpxA
locus tag: SJPD1_RS01105
old locus tag: SJPD1_0222
so part of: sequence
location: 202324..203118
location: region:202324-203118:1
so has part: feature:202324-203118:1:exon
subclass of: SO_0000010

position:202324:1
position: 202324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203118:1
position: 203118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202324-203118:1:exon

SJPD1_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: lpxA
locus tag: SJPD1_RS01105
old locus tag: SJPD1_0222
EC number: 2.3.1.129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855989.1
GO function: GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
GO process: GO:0008610 - lipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
translation: MPNIHPTAIVEEGASLADDVKIGAYAFVSKDTILKSGVEVMQGAQIYGVTKVGEDTKICPYAVIGMPPQDIGYKPEDDVRVEIGRNVMIREFVTINAGTKKGGGVTRIGNNCFIMIYCHIAHDCQVGNNVIMANNATLAGHVHIGSFTVIGGMTPIHQFVHIGEGVMIGGASAISQDIPPFCLAEGNRAVVRGLNSVGLKRRFEREDITAIQSAYKQLFRSENAIKETAAKLLVSETNEKVLQMCNFIMESTRGIPFERKNNGQ
SIO_010081: SJPD1_RS01105
subclass of: SO_0000673
so part of: SJPD1_RS01105
location: 202324..203118
location: region:202324-203118:1
so has part: feature:202324-203118:1:exon

WP_096045591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202324-203118:1:exon

SJPD1_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: clpX
locus tag: SJPD1_RS01110
old locus tag: SJPD1_0223
so part of: sequence
location: 203108..204340
location: region:203108-204340:1
so has part: feature:203108-204340:1:exon
subclass of: SO_0000010

position:203108:1
position: 203108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204340:1
position: 204340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203108-204340:1:exon

SJPD1_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: clpX
locus tag: SJPD1_RS01110
old locus tag: SJPD1_0223
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768414.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit ClpX
translation: MVNRECSFCGTKESNDTRLIAGDDVFICEHCVISAHKIFFGEIPEPSVSSSEEAFDQELLAPKELKKVLDDFVIGQDQAKKIFSVGVYNHYKRIFKQSTIQDDTEISKSNILLIGPTGSGKTLMAQTLARFLDVPIAISDATSLTEAGYVGEDVENILTKLLQCANGDIKKAEQGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSIVNIPPKGGRKHPNQDFIQIDTTNILFVCAGAFDGLEEIIKRRIGKNVLGFEQEKRTKSQDAGLFDLAEPDDLVHYGLIPELIGRLHVTAKLSPITKEDMVRILTEPKNAIYKQYRKLFAIDNVELSFEKEALDSVAELAIKRKTGARGLRSIIEDIMVDVMYELPELSGYEVVITKDVVTKGEKPLYIKKDKKSA
SIO_010081: SJPD1_RS01110
subclass of: SO_0000673
so part of: SJPD1_RS01110
location: 203108..204340
location: region:203108-204340:1
so has part: feature:203108-204340:1:exon

WP_096045592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203108-204340:1:exon

SJPD1_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01115
old locus tag: SJPD1_0224
so part of: sequence
location: 204356..205390
location: region:204356-205390:1
so has part: feature:204356-205390:1:exon
subclass of: SO_0000010

position:204356:1
position: 204356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205390:1
position: 205390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204356-205390:1:exon

SJPD1_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01115
old locus tag: SJPD1_0224
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768415.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein
translation: MILDKIIGFFSSDMSIDLGTANTLVLVKGKGIIINEPSVVAVQRNRYGKQNILAVGKEAKNMVGKTPGDIEAIRPMRDGVIADFDMTEKMIRYFIEKAHRRKSFLRPRIIICVPYGLTQVERKAVRESAMSAGAREVFLIEEPMAAAIGAGLPVREPQGSLVVDIGGGTTEIGVVSLGGLVISKSIRVAGDKIDMAIVDYVKKKYNLLIGERTGEEIKIAIGTAVPMDEPISMVVKGRDQVSGLLSRIELTSEDVRDAIKEPLKEIADALKDVLEVMPPDLAGDIVENGVVLTGGGALIRGFDKYLSDIVKLPVFVADEPLLAVAKGTGKALEEIELLQQLSNE
SIO_010081: SJPD1_RS01115
subclass of: SO_0000673
so part of: SJPD1_RS01115
location: 204356..205390
location: region:204356-205390:1
so has part: feature:204356-205390:1:exon

WP_087437507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204356-205390:1:exon

SJPD1_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: mreC
locus tag: SJPD1_RS01120
old locus tag: SJPD1_0225
so part of: sequence
location: 205383..206129
location: region:205383-206129:1
so has part: feature:205383-206129:1:exon
subclass of: SO_0000010

position:205383:1
position: 205383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206129:1
position: 206129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205383-206129:1:exon

SJPD1_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: mreC
locus tag: SJPD1_RS01120
old locus tag: SJPD1_0225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855992.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreC
translation: MSKFKIIILLCIFVFVSFRYSTDARHIIGGINTKILASYGDMKMQIEAKINEHFAQQEEIQRLRTENQSLQKSAVLSIAFASKLSDMLKEHNVTAYNPRVSMIQSIGYTNLNDYGKVWLKFDDFNQSKIYGLLQQGYAAGIVVSNDGHPQGLLLSDPKSIFAVYIGNQKMQGVAQGNRKEVLVKYISQWLQPQVGDEVVTSGLDGIFFEGIKVGVVTEVIDEESSKTVVVKPYAAPHVPAYMHVIMQN
SIO_010081: SJPD1_RS01120
subclass of: SO_0000673
so part of: SJPD1_RS01120
location: 205383..206129
location: region:205383-206129:1
so has part: feature:205383-206129:1:exon

WP_096045593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205383-206129:1:exon

SJPD1_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: carB
locus tag: SJPD1_RS01125
old locus tag: SJPD1_0226
so part of: sequence
location: 206191..209448
location: region:206191-209448:1
so has part: feature:206191-209448:1:exon
subclass of: SO_0000010

position:206191:1
position: 206191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209448:1
position: 209448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206191-209448:1:exon

SJPD1_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: carB
locus tag: SJPD1_RS01125
old locus tag: SJPD1_0226
EC number: 6.3.5.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855993.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamoyl-phosphate synthase large subunit
translation: MPKRQDIKTILLIGSGPIVIGQACEFDYSGTQAAKTLKELGYRVVLVNSNPATIMTDPEFADRTYIEPITPEVIARIIEKERVDAILPTMGGQTALNVAMTMHDQGMLKDIIFLGANPAAIKKGEDRQAFKEAMLKIGMDLPISAYAYNLEDAYAAADKIGFPLIIRASYTLAGGGSGVAYNIDEFKELAMAGLDASPINEILIEESLLGWKEYEMEVIRDHADNCIIVCSIENFDPMGVHTGDSITIAPALTLTDKEYQRMRNASFAILREIGVDTGGSNVQFSICPQTGRMTVIEMNPRVSRSSALASKATGYPIAKVATLLAVGFTLDEIKNDITGTAASFEPVIDYIVTKIPRFTFEKFPLADSTLTTSMKSVGEVMAIGRTFKESFQKALCSLETNLSGFESLKVDEDKLKNEIRRPNCDRVLYVGEAFRRGYSVEDVFNLSKIDPWFLGQIKEIIDFETKIDMFILNDEELLRKAKTMGFSDKMIAKLINKEDNLELTTNDIYFARNKLGIDFEYNEVDTCAAEFKALTPYLYSTTNVTKLPLHVKEKETQKKVMIIGGGPNRIGQGIEFDYCCVHAAYALNDMGVKTIMYNCNPETVSTDYDTSDILYFEPIDFEHVRSVVEKENPDGVIVHFGGQTPLKLAKKLTVMGAKIIGTTARVIDMAEDREKFSKFITENNIKQPHNATATSEEEAIEKAKEIGYPVLVRPSYVLGGRAMRIVYNESELRTYMNEAVSVSHNSPVLIDQFLDRAIEMDVDAICDGKEVYIGGIMQHIEEAGIHSGDSACSLPSISLSDALLSKIESQTKQIALNLGVVGLMNIQYAIYQDDVYMIEVNPRASRTVPFVSKATGIPMAKVATRVMFQGNLREALSFYDKFDVVREGNGILKPKKFDHVAVKEAVFPFNKLQGADLILGPEMKSTGEVMGISRNFPASFAKSQIASANVLPKSGSVFISLVDIDKSFAKEIGTKFEALGFKVIATGGTHKALQEAGVNAEFVYKISEGRPNIEDKLKNGDIALVINTSDNKSSKDDAKKIRQAVLRFKIPYFTTVSAASAATTAIEYIQDKSALEPRALQDYLN
SIO_010081: SJPD1_RS01125
subclass of: SO_0000673
so part of: SJPD1_RS01125
location: 206191..209448
location: region:206191-209448:1
so has part: feature:206191-209448:1:exon

WP_096045594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206191-209448:1:exon

SJPD1_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01130
old locus tag: SJPD1_0227
so part of: sequence
location: 209455..209895
location: region:209455-209895:1
so has part: feature:209455-209895:1:exon
subclass of: SO_0000010

position:209455:1
position: 209455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209895:1
position: 209895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209455-209895:1:exon

SJPD1_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01130
old locus tag: SJPD1_0227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012855994.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sua5 YciO YrdC YwlC family protein
translation: MNPNLVYLAQTETTVGFLSQNAEALARTKNRPQGKPFLISVDSLNTLRSFTRVPKHHKNRVRRVQKTTFVYPCGLAIRVVKYEEHLQFLKKFKWSYSTSSNPSGKGFDEAFAIEKADVIVFTCKGFFEDKPSTIYKLGKRKLRKLR
SIO_010081: SJPD1_RS01130
subclass of: SO_0000673
so part of: SJPD1_RS01130
location: 209455..209895
location: region:209455-209895:1
so has part: feature:209455-209895:1:exon

WP_096045595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209455-209895:1:exon

SJPD1_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01135
old locus tag: SJPD1_0228
so part of: sequence
location: 209895..210518
location: region:209895-210518:1
so has part: feature:209895-210518:1:exon
subclass of: SO_0000010

position:210518:1
position: 210518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209895-210518:1:exon

SJPD1_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01135
old locus tag: SJPD1_0228
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004509222.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLQKLKEAEAYFLELYPQGFEDVGLLPIIKRHNTAKIGEHVRELFAKENFTQPELICENFTKIVSKSTLISLFEKPKVRDMIKSMRMERRDMLSIGLYELLYGDPKEGFETLVEVLSFYSLAKWSIVTLIPYYFYRDKEFFIKPTTTKNIINFFEIEGLVYKPKPSYEFYVKYKKVLEGMKVNVGEKISHDDNAAFTGFLMMAMEE
SIO_010081: SJPD1_RS01135
subclass of: SO_0000673
so part of: SJPD1_RS01135
location: 209895..210518
location: region:209895-210518:1
so has part: feature:209895-210518:1:exon

WP_096045596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209895-210518:1:exon

SJPD1_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01140
old locus tag: SJPD1_0229
so part of: sequence
location: complement(210544..211209)
location: region:210544-211209:-1
so has part: feature:210544-211209:-1:exon
subclass of: SO_0000010

position:210544:-1
position: 210544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211209:-1
position: 211209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210544-211209:-1:exon

SJPD1_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01140
old locus tag: SJPD1_0229
inference: COORDINATES: protein motif:HMM:NF037417.2
GO function: GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease
translation: MSSKQKFEFSPAKNELITDDMILDDLKNVVQKLNVISLTQKIYTQYGQYDCTTVSRRFGTWNKALKLAGLQLSNEVNISDERLFKNLLNLWEHLGKQPTRRDLDNKISEFSQSPYNRRFKSWTDALKLFVIWANDEELSAPKENQNLSVKPKNGRDVSLRLRFQVLRRDNFACVQCGASPAKNPSVELHIDHIMPWSKGGDTVYENLQTLCSKCNLGKSNL
SIO_010081: SJPD1_RS01140
subclass of: SO_0000673
so part of: SJPD1_RS01140
location: complement(210544..211209)
location: region:210544-211209:-1
so has part: feature:210544-211209:-1:exon

WP_096045597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210544-211209:-1:exon

SJPD1_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01145
old locus tag: SJPD1_0230
so part of: sequence
location: complement(211234..211878)
location: region:211234-211878:-1
so has part: feature:211234-211878:-1:exon
subclass of: SO_0000010

position:211234:-1
position: 211234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211878:-1
position: 211878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211234-211878:-1:exon

SJPD1_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01145
old locus tag: SJPD1_0230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856002.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA threonylcarbamoyladenosine dehydratase
translation: MEDRYSRVRRVFGEDFEKLQKAKVLLLGIGGVGSPCLDALYRTGISDITIVDFDRYDVTNQNRQLGSEAVGEVKVLHMASLYKGVTPIEAKVTPEWVESFNFEPYDIVIDAIDDMEAKIAVAHKAHTKLLSSAGGAKKIDPTKIHYAPIWDTYGDMLAKGFRDGLKKTGFQGTFLTVFSDEKPICKEMGSLMCVTASFGLTLASLAIRKITGKL
SIO_010081: SJPD1_RS01145
subclass of: SO_0000673
so part of: SJPD1_RS01145
location: complement(211234..211878)
location: region:211234-211878:-1
so has part: feature:211234-211878:-1:exon

WP_096045598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211234-211878:-1:exon

SJPD1_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: surE
locus tag: SJPD1_RS01150
old locus tag: SJPD1_0231
so part of: sequence
location: complement(211878..212663)
location: region:211878-212663:-1
so has part: feature:211878-212663:-1:exon
subclass of: SO_0000010

position:212663:-1
position: 212663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211878-212663:-1:exon

SJPD1_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: surE
locus tag: SJPD1_RS01150
old locus tag: SJPD1_0231
EC number: 3.1.3.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768428.1
GO function: GO:0008252 - nucleotidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'/3'-nucleotidase SurE
translation: MKRILITNDDGFESTGLHALARALRPLGQVTIVAPTSEKSACGHSLTLTRPLRFVAIGDDFYKLDDGTPTDCIYLSLNALFEGDSKPDLVVSGINKGSNLGEDITYSGTASAAMEAALHGVPAIAISQVYTGGPQNIELTHGYDLAEQTVYDLSKRILEGSFPLAERRFLNVNIPALKPEECKGYKITRAGYRMYGNDAHLHRNPRGEEYYWLGVHTLEWKKGEADDCDLSAIDEGYVSITPIKLDMTAHDELENLKQWIQ
SIO_010081: SJPD1_RS01150
subclass of: SO_0000673
so part of: SJPD1_RS01150
location: complement(211878..212663)
location: region:211878-212663:-1
so has part: feature:211878-212663:-1:exon

WP_096045599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211878-212663:-1:exon

SJPD1_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: lpxB
locus tag: SJPD1_RS01155
old locus tag: SJPD1_0232
so part of: sequence
location: 212818..213849
location: region:212818-213849:1
so has part: feature:212818-213849:1:exon
subclass of: SO_0000010

position:212818:1
position: 212818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213849:1
position: 213849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212818-213849:1:exon

SJPD1_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: lpxB
locus tag: SJPD1_RS01155
old locus tag: SJPD1_0232
EC number: 2.4.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856004.1
GO function: GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid-A-disaccharide synthase
translation: MKLLVSALEPSANLHLEPLLSALEQCELYGIFDERFGKPLLPSKAFSIMGFLDALPKIRKAKRAIKVMARMSFFVDKVLLIDSPAFNIPLAKAIKTINPNVEIIYYILPQVWAWKPKRVAKVEKYCDVLASILPFEQQFYTKATYVGNPLLDEIPLFKLSAEETGVIAFLPGSRKSEIRSLFPIYKEVASRIEGKEKLLVIPPHFDYREIVDIYGDIHDFKICRNTYEAFEKSEFAFVCSGTATLEAALVGVPFVLAYKAKAFDYWVAQQFVKLKHVGLANIIFDFEKMEPLHVELLQEDVFADNLLKAYENMDKEAFFNHAKKLRTMLSHGSQEAMISIMKV
SIO_010081: SJPD1_RS01155
subclass of: SO_0000673
so part of: SJPD1_RS01155
location: 212818..213849
location: region:212818-213849:1
so has part: feature:212818-213849:1:exon

WP_096045600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212818-213849:1:exon

SJPD1_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: greA
locus tag: SJPD1_RS01160
old locus tag: SJPD1_0233
so part of: sequence
location: 213873..214367
location: region:213873-214367:1
so has part: feature:213873-214367:1:exon
subclass of: SO_0000010

position:213873:1
position: 213873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214367:1
position: 214367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213873-214367:1:exon

SJPD1_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: greA
locus tag: SJPD1_RS01160
old locus tag: SJPD1_0233
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856005.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreA
translation: MSTKEPMTEYGYQKLTNELSDLKKRQRPETVIELDIARSHGDLKENSEYHAAKDHLAFLDGRIGELSDLVSRAQVINPNSYEHDKIRFGSTIKLENTETGDELTYTIVGSTESNPDRGLISYHTPLSQQLLGHGEGEEVTIKLPSGQQIFEILEVIYIEIQFEE
SIO_010081: SJPD1_RS01160
subclass of: SO_0000673
so part of: SJPD1_RS01160
location: 213873..214367
location: region:213873-214367:1
so has part: feature:213873-214367:1:exon

WP_088437179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213873-214367:1:exon

SJPD1_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: argC
locus tag: SJPD1_RS01165
old locus tag: SJPD1_0234
so part of: sequence
location: 214371..215384
location: region:214371-215384:1
so has part: feature:214371-215384:1:exon
subclass of: SO_0000010

position:214371:1
position: 214371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215384:1
position: 215384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214371-215384:1:exon

SJPD1_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: argC
locus tag: SJPD1_RS01165
old locus tag: SJPD1_0234
EC number: 1.2.1.38
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011373162.1
GO function: GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO process: GO:0006592 - ornithine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetyl-gamma-glutamyl-phosphate reductase
translation: MAKIDVAIIGVSGYTGLELMKILINHPHFNITYIATTEGGMKATELHPSLLGVFEQEVLKADARDVAKHAKLAFLALPHKAAMGFAKELLALHVKVVDLSADYRLELEAYEEHYCEHEDKENLKEAVYGLPEINRAKIKQAKLVANPGCYPTASILGILPFLNYLKKDAPIFIDAKSGVSGAGKKPTSTAHFVSINENIFAYNPLKHRHEPEIAEKLRLVSGHPFEVNFVPHLLPVSRGMLVSSYLQTNDIIDAKAVLQDFYKNEHFVRIREVPVDIKSTAGTNFCDIFVSQKGKSLFVSSSIDNLLRGASAQAVVNANLMCGFEESAGIPIIAYVP
SIO_010081: SJPD1_RS01165
subclass of: SO_0000673
so part of: SJPD1_RS01165
location: 214371..215384
location: region:214371-215384:1
so has part: feature:214371-215384:1:exon

WP_210394392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214371-215384:1:exon

SJPD1_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01170
old locus tag: SJPD1_0235
so part of: sequence
location: 215374..216108
location: region:215374-216108:1
so has part: feature:215374-216108:1:exon
subclass of: SO_0000010

position:215374:1
position: 215374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216108:1
position: 216108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215374-216108:1:exon

SJPD1_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01170
old locus tag: SJPD1_0235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856007.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-2,3-diacylglucosamine hydrolase
translation: MSPNLIIQEGALFIADAHDSAERSFFFDFLLHVKQNPPPQLFLMGDMFDLLVGSVDYGVKQYQRYIDLIDEIGKCCEVYYFEGNHDFDLSKLFHYVKVIPIAEQPFTCKLPSGKSCLLLHGDKYGGFIHRCYTKMIRNQGVLSVLNVLDGLLQGFISQKIQNNQRKKMLCKPIEHFATLIQRKLHFYPKVDVIAEGHYHQNTDFMVVGTHYINFSSFACNQSYFSVQSSPETEFAQKQLRGCNG
SIO_010081: SJPD1_RS01170
subclass of: SO_0000673
so part of: SJPD1_RS01170
location: 215374..216108
location: region:215374-216108:1
so has part: feature:215374-216108:1:exon

WP_096045601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215374-216108:1:exon

SJPD1_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01175
old locus tag: SJPD1_0236
so part of: sequence
location: 216101..217051
location: region:216101-217051:1
so has part: feature:216101-217051:1:exon
subclass of: SO_0000010

position:216101:1
position: 216101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217051:1
position: 217051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216101-217051:1:exon

SJPD1_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01175
old locus tag: SJPD1_0236
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012001425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein
translation: MAKESILKVGSNEMELVDFRIFKKEANGVYEGIYGVNVAKVREIIKIPNLTELPGVPEYIEGIFDLRGIVIPVINLAKWMNIKEPDDGSIKPRIIITEFSDILIGFVVHEAKRIRRISWKDIEPASFVAGMGSLDKSQITGVTRIENDEVLLILDLESVVQALGIYQPKIDVEDNAIIKVDGTALILDDSMTARKLVSDALKKMGMRVIEAKDGSEGLERLNDLYTTYGEHLTDEVKIIISDVEMPQMDGFHFAASVKEDARFKNIPIVFNSSISDHFSELRGKEAGGEAYLTKFDAGIFYKEVSKVIKSHVKTAQ
SIO_010081: SJPD1_RS01175
subclass of: SO_0000673
so part of: SJPD1_RS01175
location: 216101..217051
location: region:216101-217051:1
so has part: feature:216101-217051:1:exon

WP_096045602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216101-217051:1:exon

SJPD1_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01180
old locus tag: SJPD1_0237
pseudo: true
so part of: sequence
location: 217062..219392
location: region:217062-219392:1
so has part: feature:217062-219392:1:exon
subclass of: SO_0000010

position:217062:1
position: 217062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219392:1
position: 219392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217062-219392:1:exon

SJPD1_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01180
old locus tag: SJPD1_0237
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856009.1
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: chemotaxis protein CheW
SIO_010081: SJPD1_RS01180
subclass of: SO_0000673
so part of: SJPD1_RS01180
location: 217062..219392
location: region:217062-219392:1
so has part: feature:217062-219392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217062-219392:1:exon

SJPD1_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01185
old locus tag: SJPD1_0239
so part of: sequence
location: 219406..219900
location: region:219406-219900:1
so has part: feature:219406-219900:1:exon
subclass of: SO_0000010

position:219406:1
position: 219406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219900:1
position: 219900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219406-219900:1:exon

SJPD1_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01185
old locus tag: SJPD1_0239
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002950733.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheW
translation: MNDKLNQILQKQQQQVDEPHKKEDDIIQLVGFIIGQEEYAVPILSIQEIIKPIEYTRVPSVPTYILGVFNLRGSVIPLIDLRSKFKMDPSKVTEDTRYIVMKGSDNTAGFVIDRLTEAIRIKSSRIGPPPETIHAEKGMVYGIGMRDENILTILKVEQLLKRDF
SIO_010081: SJPD1_RS01185
subclass of: SO_0000673
so part of: SJPD1_RS01185
location: 219406..219900
location: region:219406-219900:1
so has part: feature:219406-219900:1:exon

WP_096045603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219406-219900:1:exon

SJPD1_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01190
old locus tag: SJPD1_0240
so part of: sequence
location: complement(219950..220864)
location: region:219950-220864:-1
so has part: feature:219950-220864:-1:exon
subclass of: SO_0000010

position:219950:-1
position: 219950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220864:-1
position: 220864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219950-220864:-1:exon

SJPD1_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01190
old locus tag: SJPD1_0240
EC number: 1.5.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768436.1
GO function: GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO process: GO:0006555 - methionine metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylenetetrahydrofolate reductase
translation: MIDSFIEKLKYDTFLTLETTPMHEPTFEPIIEKIAQFGLDKKVDGFSTTDNPLARLKFNAFFGALKLQTRFTKPVITTMSMRDRNKVALQSDLLGANAYDLRTILCLTGDPASASDQPAVKGVFEGNSTLLLEIIQCFNAGIDYSGKPFKTQPKPIYPFAVCNAHANTPKNLMKKMATKIEHGAVGIITQPVYSVENATMLLELLKDAKSAANKEQSHTQLILGFFPIVKLRTAQFLAAHVPGIYVPPLWMEKLAKAKKISEEEEKKVGFELSRNAFLALKKVHPKIHMMSANNFELVADLLQS
SIO_010081: SJPD1_RS01190
subclass of: SO_0000673
so part of: SJPD1_RS01190
location: complement(219950..220864)
location: region:219950-220864:-1
so has part: feature:219950-220864:-1:exon

WP_096045604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219950-220864:-1:exon

SJPD1_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01195
old locus tag: SJPD1_0241
so part of: sequence
location: 221031..221333
location: region:221031-221333:1
so has part: feature:221031-221333:1:exon
subclass of: SO_0000010

position:221031:1
position: 221031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221333:1
position: 221333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221031-221333:1:exon

SJPD1_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01195
old locus tag: SJPD1_0241
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIVLMLGGLSILGATMFADTATDLKADKQKLAADNQQIKVDEKQLKTDKVNKNKEAIETDKQKLATDKQQKQTDKAKLEADKAQKKAEKASSKPPVSN
SIO_010081: SJPD1_RS01195
subclass of: SO_0000673
so part of: SJPD1_RS01195
location: 221031..221333
location: region:221031-221333:1
so has part: feature:221031-221333:1:exon

WP_096045605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221031-221333:1:exon

SJPD1_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: serB
locus tag: SJPD1_RS01200
old locus tag: SJPD1_0242
so part of: sequence
location: 221454..222074
location: region:221454-222074:1
so has part: feature:221454-222074:1:exon
subclass of: SO_0000010

position:221454:1
position: 221454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222074:1
position: 222074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221454-222074:1:exon

SJPD1_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: serB
locus tag: SJPD1_RS01200
old locus tag: SJPD1_0242
EC number: 3.1.3.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768437.1
GO function: GO:0036424 - L-phosphoserine phosphatase activity [Evidence IEA]
GO process: GO:0006564 - L-serine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoserine phosphatase SerB
translation: MKLCVFDFDSTLMNGETIDFLAKEHGVEKEVSMITEAAMRGELDFFESLTTRVGLLKGMNARKAEEICASLPLMNGAKEAIVGLKAKGYTVVVFSGGFRIATTPAKAILGFDADFANVLHARDGHLSGLVGGDMMFGFSKGDMLKRVQNLLHVNYENTIAVGDGANDISMFECAAKKVAFCAKPILKNAANVVIDEKDMRHLLQFI
SIO_010081: SJPD1_RS01200
subclass of: SO_0000673
so part of: SJPD1_RS01200
location: 221454..222074
location: region:221454-222074:1
so has part: feature:221454-222074:1:exon

WP_096045606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221454-222074:1:exon

SJPD1_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01205
old locus tag: SJPD1_0243
pseudo: true
so part of: sequence
location: 222087..>222599
location: region:222087-222599:1
so has part: feature:222087-222599:1:exon
subclass of: SO_0000010

position:222087:1
position: 222087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222599:1
position: 222599
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222087-222599:1:exon

SJPD1_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01205
old locus tag: SJPD1_0243
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013327456.1
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transaldolase family protein
SIO_010081: SJPD1_RS01205
subclass of: SO_0000673
so part of: SJPD1_RS01205
location: 222087..>222599
location: region:222087-222599:1
so has part: feature:222087-222599:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222087-222599:1:exon

SJPD1_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01210
old locus tag: SJPD1_0244
so part of: sequence
location: complement(222633..223097)
location: region:222633-223097:-1
so has part: feature:222633-223097:-1:exon
subclass of: SO_0000010

position:222633:-1
position: 222633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223097:-1
position: 223097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222633-223097:-1:exon

SJPD1_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01210
old locus tag: SJPD1_0244
inference: COORDINATES: protein motif:HMM:NF024752.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase family protein
translation: MSKTQKKQREYYSGKQKRHTLKGQIVIDKEERIMCVHTAKGTTHDFRLFQESNLPLMPKTCVYVDLGYLGIAKEHSHCQIPHKASKLHPLSEEQKEENRQKASARICVEHVNAKIKTFQILTQKYRNRRKRFNLRFNLICGLINFDRGFAVEYK
SIO_010081: SJPD1_RS01210
subclass of: SO_0000673
so part of: SJPD1_RS01210
location: complement(222633..223097)
location: region:222633-223097:-1
so has part: feature:222633-223097:-1:exon

WP_084613060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222633-223097:-1:exon

SJPD1_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01215
old locus tag: SJPD1_0245
so part of: sequence
location: complement(223019..223480)
location: region:223019-223480:-1
so has part: feature:223019-223480:-1:exon
subclass of: SO_0000010

position:223019:-1
position: 223019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223480:-1
position: 223480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223019-223480:-1:exon

SJPD1_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01215
old locus tag: SJPD1_0245
inference: COORDINATES: protein motif:HMM:NF025000.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase family protein
translation: MKKYEQMQKHKPKDFKRHIGVNEETFNAMIEVFRQYDENRKKGLGVGGRRSLSPENKVLLMLGYYREYRTLEHIGFDYGVSESTASRIVCEVEEVLIKSGRFSLPSKRELYKSDVALSFVVIDATETPCQRPKKSKESTTQVSKSVIPLKDRL
SIO_010081: SJPD1_RS01215
subclass of: SO_0000673
so part of: SJPD1_RS01215
location: complement(223019..223480)
location: region:223019-223480:-1
so has part: feature:223019-223480:-1:exon

WP_025343414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223019-223480:-1:exon

SJPD1_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01220
old locus tag: SJPD1_0246
so part of: sequence
location: 223567..224004
location: region:223567-224004:1
so has part: feature:223567-224004:1:exon
subclass of: SO_0000010

position:223567:1
position: 223567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224004:1
position: 224004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223567-224004:1:exon

SJPD1_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01220
old locus tag: SJPD1_0246
inference: COORDINATES: protein motif:HMM:NF013116.2
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transaldolase family protein
translation: MISIFVSRFDRKLDEHFKKIDFVLSRVGIMNAMRAYELIQNAQLPNVRALFASTGVKGDELSPDYYIRELLLPNSINTAPLGTIKAFIGSSKECESIELRSDWIENFFHSLAANGVDMNAVCDELMDEGLSAFKDAFVEILDELK
SIO_010081: SJPD1_RS01220
subclass of: SO_0000673
so part of: SJPD1_RS01220
location: 223567..224004
location: region:223567-224004:1
so has part: feature:223567-224004:1:exon

WP_226372274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223567-224004:1:exon

SJPD1_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01225
old locus tag: SJPD1_0247
so part of: sequence
location: 224017..225216
location: region:224017-225216:1
so has part: feature:224017-225216:1:exon
subclass of: SO_0000010

position:224017:1
position: 224017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225216:1
position: 225216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224017-225216:1:exon

SJPD1_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01225
old locus tag: SJPD1_0247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856014.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PilT/PilU family type 4a pilus ATPase
translation: MQNGVNVSELTFEMTKKLKFYLSKLVEHRGSDLHVKTGTTIRGRINGEIVSFSREVLAYQDGLTLAKELLRSRFPELVEKKNIDFTFKLNDEYRFRVNMFFQVDGVSAVFRTIPMVLPTIESLHLPTIINTLCDLPRGLILVTGPTGSGKTTTLASMINRINKTQKKHIITIEDPVEFIYKDELCVVNQRAIGQDAISFSDALRAALREDPDVILVGEMRDLETIETAMHAAETGHLVLSTLHTVDAKETIGRIIGMFPGSEQNRIKMSLASVLQGVIAQRLVKTVDHGRTAAVEILVKNARIEALILEDREGEIPDAIKEGKDVYKTQTFDQALLGLYAEGKIAREEAIQSSTSRNDITMALDFYDADKSQKETRKETVRVSLKELKENDKDIIGLKQ
SIO_010081: SJPD1_RS01225
subclass of: SO_0000673
so part of: SJPD1_RS01225
location: 224017..225216
location: region:224017-225216:1
so has part: feature:224017-225216:1:exon

WP_096045609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224017-225216:1:exon

SJPD1_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01230
old locus tag: SJPD1_0248
so part of: sequence
location: 225283..225819
location: region:225283-225819:1
so has part: feature:225283-225819:1:exon
subclass of: SO_0000010

position:225283:1
position: 225283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225819:1
position: 225819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225283-225819:1:exon

SJPD1_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01230
old locus tag: SJPD1_0248
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002861092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L25/general stress protein Ctc
translation: MLEGIIRDSIEKKATKALRRDGYLIANIYGKGEQNINAAFKANEFIKAAKNKETLIFPVKVAGKEYNVVIQDYQRDPVNSNLLHVDLRIALPGVLSKYLVPVLLEGIPVGTKNKGVLIQSKKRLAVKCTAENLPNSFIIDVSNLDVGATVLVRDIPVPANVTIMDETRVSVAGVIKAK
SIO_010081: SJPD1_RS01230
subclass of: SO_0000673
so part of: SJPD1_RS01230
location: 225283..225819
location: region:225283-225819:1
so has part: feature:225283-225819:1:exon

WP_096045610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225283-225819:1:exon

SJPD1_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: pth
locus tag: SJPD1_RS01235
old locus tag: SJPD1_0249
so part of: sequence
location: 225829..226404
location: region:225829-226404:1
so has part: feature:225829-226404:1:exon
subclass of: SO_0000010

position:225829:1
position: 225829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226404:1
position: 226404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225829-226404:1:exon

SJPD1_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: pth
locus tag: SJPD1_RS01235
old locus tag: SJPD1_0249
EC number: 3.1.1.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768441.1
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoacyl-tRNA hydrolase
translation: MTLIVGLGNPDLQYKNNRHNVGFMVIDALLDDQSSCEKITKANFKGELFKAPSMLLLKPATYMNLSGESVRAVDDYFKPDQIIVIHDDLDLPFGTLRFKIGGGHGGHNGLRSIDAHIGPEYIRVRIGIGKPSLKSDVAKYVLSDFSACQREFLPGILLHVKKSVKALLTGDLKEVSLQYSLKQTLCDEDKA
SIO_010081: SJPD1_RS01235
subclass of: SO_0000673
so part of: SJPD1_RS01235
location: 225829..226404
location: region:225829-226404:1
so has part: feature:225829-226404:1:exon

WP_096045611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225829-226404:1:exon

SJPD1_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01240
old locus tag: SJPD1_0250
so part of: sequence
location: 226401..227459
location: region:226401-227459:1
so has part: feature:226401-227459:1:exon
subclass of: SO_0000010

position:226401:1
position: 226401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227459:1
position: 227459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226401-227459:1:exon

SJPD1_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01240
old locus tag: SJPD1_0250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856017.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LptF/LptG family permease
translation: MKLFEKYIIQNYLKNFFVIFIALDLFYVGVDLLTNYNNIPDSANLQILYALFQGMNAVNYVLPLSIVFGMIVTYFGMIKSNELICMYASSISKRSLVKPFFITSLVLTLSYIGLNCTEFAYAYEYSSNLKKYNSISNSAEDLFLKNNNQYIYFKKLDPLKQVAYDVTIFEVDNVDLTKVIRASVATFVDNHWILEHVSITHKPKVSSLDDEGFRIENVEKLKMMENFKPKIMDNVYQSEYALSISDGIDALRFFDNQNVNTSKIKATLFYQLFFPFFAPFLIVVLYYKAPMMGRYFNMALVASSFAFVTLVVWSGLFLLSRLAANGVILSEIAILFPIILLVGIAAYFYSKR
SIO_010081: SJPD1_RS01240
subclass of: SO_0000673
so part of: SJPD1_RS01240
location: 226401..227459
location: region:226401-227459:1
so has part: feature:226401-227459:1:exon

WP_096045612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226401-227459:1:exon

SJPD1_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: lysA
locus tag: SJPD1_RS01245
old locus tag: SJPD1_0251
so part of: sequence
location: 227518..228762
location: region:227518-228762:1
so has part: feature:227518-228762:1:exon
subclass of: SO_0000010

position:227518:1
position: 227518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228762:1
position: 228762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227518-228762:1:exon

SJPD1_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: lysA
locus tag: SJPD1_RS01245
old locus tag: SJPD1_0251
EC number: 4.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004511017.1
GO function: GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminopimelate decarboxylase
translation: MGLLLQYPHLRFKMTKFSALAQKYGTPLYVYDFDTIAQKFLLLKESFKARKSLICFAVKSNSNLSVLKHIASLGAGCDCVSIGEVKRALVAGIPKYKIIFSGVGKRDDEIEEALQNDILMLNLESEEEMNRVEMIASKLGVVARISIRVNPNIDPKTHPYISTGLHENKFGVDLESAKRMYIYAKNSSSLDPVGIHFHIGSQITEVEPFKEAALVLANLLRNLKALKIDIKFFDVGGGIGIQYKDETTVPLYEYAQSIFSALSGLDVTLVCEPGRYLVGESGYFLTRVLYEKNNGFKRFVIVDGAMNDLIRPSLYHAYHAIDVEGKENKATTKCDVVGPICESGDFLAKDIELPALEHDDLLIVKSAGAYGFTMSSNYNTRSRVAEIALQNGEDRLIRQRESFEDVIALEKAYL
SIO_010081: SJPD1_RS01245
subclass of: SO_0000673
so part of: SJPD1_RS01245
location: 227518..228762
location: region:227518-228762:1
so has part: feature:227518-228762:1:exon

WP_256376039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227518-228762:1:exon

SJPD1_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: pheA
locus tag: SJPD1_RS01250
old locus tag: SJPD1_0252
so part of: sequence
location: 228879..229946
location: region:228879-229946:1
so has part: feature:228879-229946:1:exon
subclass of: SO_0000010

position:228879:1
position: 228879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229946:1
position: 229946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228879-229946:1:exon

SJPD1_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: pheA
locus tag: SJPD1_RS01250
old locus tag: SJPD1_0252
EC number: 4.2.1.51
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768445.1
GO function: GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO process: GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prephenate dehydratase
translation: MQTIEHYRKKIDHIDDQILKLLNERMELVKEIGRAKQTSGTAIYRPEREKEILDRLKGLNEGALNPKAIDAIFLEVFAVSRNLEFPEKIAFMGPEGSYTHQAAESRFGAMGSYIELSSIEAVFHVLENGEAKYGVVPVENNTAGAVGTTLDCLGKFNSKIVAELYMDIHHSFATVCEDIKKVKRIYSHPQGYNQCRKFLEEHMLLGVEFIPTKSTAEAAKKASEDYDAAAICSHIAAKLSNLPVLFEKIEDNMANQTRFLILSDFKNKKGIHNKTSILAKTDDKPGGLVEFLQTFQDQKVNLTKIESRPTKEKGFQSIFYMDFEGHIDDENVQKVIEENRDRYDIKWLGSYICGG
SIO_010081: SJPD1_RS01250
subclass of: SO_0000673
so part of: SJPD1_RS01250
location: 228879..229946
location: region:228879-229946:1
so has part: feature:228879-229946:1:exon

WP_096045614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228879-229946:1:exon

SJPD1_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: hisC
locus tag: SJPD1_RS01255
old locus tag: SJPD1_0253
so part of: sequence
location: 229950..231050
location: region:229950-231050:1
so has part: feature:229950-231050:1:exon
subclass of: SO_0000010

position:229950:1
position: 229950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231050:1
position: 231050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229950-231050:1:exon

SJPD1_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: hisC
locus tag: SJPD1_RS01255
old locus tag: SJPD1_0253
EC number: 2.6.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768446.1
GO function: GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidinol-phosphate transaminase
translation: MQFNGVLDNLKTYEAGKPIELVVREYGIEPQDVIKLASNENPRGCSPKVIEAVRAEAIHMNRYPDDSMYELKEALARKYHVEDKNIIIGSGSDQVIEMAIHAKANANSKVLMAGITFAMYEIYALQTGAKVLRTPSSQHNLKEMLEIYKANKDISIIVLCIPNNPLGECLDAKEVYAFLEQIDKETLVIVDAAYLEYARVKDPAKNIDAHDLITKYPNAIYTGTFSKAYGLGGMRCGYGIAQPAIIQTFLKLRAPFNITNLTLKAAIVALSDQAFVDASVKENFEEMKVYEVFAKELGFSIIESYTNFIVLAFDASKNAGVIAQKLMEKGIIVRNLGSYGMNAIRVTIGTPEQNVRFFELFKTIYK
SIO_010081: SJPD1_RS01255
subclass of: SO_0000673
so part of: SJPD1_RS01255
location: 229950..231050
location: region:229950-231050:1
so has part: feature:229950-231050:1:exon

WP_096045615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229950-231050:1:exon

SJPD1_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: fliF
locus tag: SJPD1_RS01260
old locus tag: SJPD1_0254
so part of: sequence
location: 231061..232791
location: region:231061-232791:1
so has part: feature:231061-232791:1:exon
subclass of: SO_0000010

position:231061:1
position: 231061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232791:1
position: 232791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231061-232791:1:exon

SJPD1_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: fliF
locus tag: SJPD1_RS01260
old locus tag: SJPD1_0254
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856022.1
GO component: GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal-body MS-ring/collar protein FliF
translation: MELRTLLNQIATLIQNLTLRQRIVAAVSIVVLIGFLVFLTLYKNSTSTKGSGYSVLFENTTAGDSALIIQQLEKEKIPYKVVNEGTIAVPSDVVHKERIAIAALGIPKNSKVGFEIFDKAEFGATDFEQKIKYVRALEGELARTIESLGPIANASVHIAIPKETVFAQKQATPTASIVLNIRPSMNLSAKQIIGIKNLVAASISNLTAENVSIVNQDGEPLGDDQNNMFQGELVKSQMRYKKEFEHNVEQKIINVLAPVIGGVDKVNAKVTIDFDFSQQDYVSETYDPNSVPRSEQSVEEKREGKEPQDVGGVPGAISNIGPVQGLESTKKAETYQKSSTTTNYEISKKVVNSKDEFAKIKRLTAAVVVDGAYKYGVDSNGKKKSELEYAALSKEQMDAIRDVVKQTVGYNQTRGDEVTVSNFEFKPLSSDGTRAPTKDLMDKVSNYMGPLVPLLKYIIVGILLFVFYKKVIIPFSHKMVETKLDDFEDEIEPMAAPEEEGAEDTLEKFRQARKKVEDQLGIGQDFNEEALKYDVLLEKLKHLAEQKSEEFASLLQSMIRNEGDYDGGKNSSKDLS
SIO_010081: SJPD1_RS01260
subclass of: SO_0000673
so part of: SJPD1_RS01260
location: 231061..232791
location: region:231061-232791:1
so has part: feature:231061-232791:1:exon

WP_096045616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231061-232791:1:exon

SJPD1_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: fliG
locus tag: SJPD1_RS01265
old locus tag: SJPD1_0255
so part of: sequence
location: 232788..233816
location: region:232788-233816:1
so has part: feature:232788-233816:1:exon
subclass of: SO_0000010

position:232788:1
position: 232788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233816:1
position: 233816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232788-233816:1:exon

SJPD1_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: fliG
locus tag: SJPD1_RS01265
old locus tag: SJPD1_0255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002778179.1
GO component: GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliG
translation: MMKLTEEQKTLYNELTMAEKAAILLIQLGEDSTANLFSHMEIDVVTDISKFIATAKNIDKAVANAVLEEFYVILQSNQYIRSGGMEYAKEILYRTFGAEGAQKILDKLSKSMENSQSFGYLSQIKPQQLGDFIINEHPQTVALILAHMDATSAAETLSFFPDQLRSEVTIRMANLGEISPSVVKRVSAVLENKLESLTSYKVEVGGPRAVAEILNRLGQKASKTTIAYIEQADEKLASVIKDMMFTFEDIMKLDGNAVREILKVADKRDLMVALKGSAEELRKKFFENMSQRAQEAFVEEMNFLGAVRVKDVEESQRKIVEEVQKLAEQGILQIGEAEEMIG
SIO_010081: SJPD1_RS01265
subclass of: SO_0000673
so part of: SJPD1_RS01265
location: 232788..233816
location: region:232788-233816:1
so has part: feature:232788-233816:1:exon

WP_226372275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232788-233816:1:exon

SJPD1_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: fliH
locus tag: SJPD1_RS01270
old locus tag: SJPD1_0256
so part of: sequence
location: 233818..234624
location: region:233818-234624:1
so has part: feature:233818-234624:1:exon
subclass of: SO_0000010

position:233818:1
position: 233818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234624:1
position: 234624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233818-234624:1:exon

SJPD1_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: fliH
locus tag: SJPD1_RS01270
old locus tag: SJPD1_0256
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856024.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar assembly protein FliH
translation: MVTENIIDKDRVDDHSVKPYRFKVLGSTPEASAVPLHVNEEYTQESMYDPESMPVSDEIINIARIEEGTQNQFIEELLKKTDELTTNVVKLQIQIEKQEQDFNNRLNEELTRERENAYAQGYQKAKDEAEVAVAEMKTRYLKSIGHLDTLYKSLEERLAKVETDMSVTAFEIAKEVIKKEVSISSSKIAASLSKALLQEVKDAVKIELRVNPKDLEALKELYAEDEKIKITADDAITLGGVVILSDVGNLDGNLAMRLEKVKYLLQEN
SIO_010081: SJPD1_RS01270
subclass of: SO_0000673
so part of: SJPD1_RS01270
location: 233818..234624
location: region:233818-234624:1
so has part: feature:233818-234624:1:exon

WP_096045617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233818-234624:1:exon

SJPD1_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: dxs
locus tag: SJPD1_RS01275
old locus tag: SJPD1_0257
pseudo: true
so part of: sequence
location: 234640..236474
location: region:234640-236474:1
so has part: feature:234640-236474:1:exon
subclass of: SO_0000010

position:234640:1
position: 234640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236474:1
position: 236474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234640-236474:1:exon

SJPD1_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: dxs
locus tag: SJPD1_RS01275
old locus tag: SJPD1_0257
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856025.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO process: GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 1-deoxy-D-xylulose-5-phosphate synthase
SIO_010081: SJPD1_RS01275
subclass of: SO_0000673
so part of: SJPD1_RS01275
location: 234640..236474
location: region:234640-236474:1
so has part: feature:234640-236474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234640-236474:1:exon

SJPD1_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01280
old locus tag: SJPD1_0258
so part of: sequence
location: 236575..236991
location: region:236575-236991:1
so has part: feature:236575-236991:1:exon
subclass of: SO_0000010

position:236575:1
position: 236575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236991:1
position: 236991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236575-236991:1:exon

SJPD1_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01280
old locus tag: SJPD1_0258
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856026.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor
translation: MNDFINLLKTKELKATPQRISVLKELDKKGHPTIDDLYNALKKENPSMSLATVYKNLATLKEKGVVIEVNTAEGKMRYDIYSKPHIHLVCQQCGSIEDVDYDQSLFEYQTILETNKHVKIDRMDVIATVKECSVCKKK
SIO_010081: SJPD1_RS01280
subclass of: SO_0000673
so part of: SJPD1_RS01280
location: 236575..236991
location: region:236575-236991:1
so has part: feature:236575-236991:1:exon

WP_096045618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236575-236991:1:exon

SJPD1_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01285
old locus tag: SJPD1_0259
so part of: sequence
location: complement(237041..237637)
location: region:237041-237637:-1
so has part: feature:237041-237637:-1:exon
subclass of: SO_0000010

position:237041:-1
position: 237041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237637:-1
position: 237637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237041-237637:-1:exon

SJPD1_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01285
old locus tag: SJPD1_0259
EC number: 1.11.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002952389.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin
translation: MLVTNKAPDFTATAVLGDNQIVDNFNLYENFGSKGTVLFFYPLDFTFVCPSEIIAFDKRLEEFKNRGINVIGASIDSQFSHFAWKNTPINQGGIGQVRFPLVADITKQISRDYDVLLNGSVALRGSFLIDKDGTVRHAVINDLPLGRNIDEMLRMIDTMLFTNEYGEVCPAGWQKGDKGMTASTAGVADYLAHNSDKL
SIO_010081: SJPD1_RS01285
subclass of: SO_0000673
so part of: SJPD1_RS01285
location: complement(237041..237637)
location: region:237041-237637:-1
so has part: feature:237041-237637:-1:exon

WP_087437535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237041-237637:-1:exon

SJPD1_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01290
old locus tag: SJPD1_0260
so part of: sequence
location: complement(237746..239716)
location: region:237746-239716:-1
so has part: feature:237746-239716:-1:exon
subclass of: SO_0000010

position:237746:-1
position: 237746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239716:-1
position: 239716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237746-239716:-1:exon

SJPD1_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01290
old locus tag: SJPD1_0260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768872.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MNSLAKKVTILQVLIVSFAIFAFIFYINIYLSSYIKQETEQKITANLTGLEQTVNVYNSALEDTAIKLFTVFESEFSNFHINASEKIMVHGVETPLIAADGHTLNNNFVKVDTFTNLTGAVATIFAFHGDDFVRVSTSLKKEDGSRAMGTMLGKTSPAYEPIMKKQKYIGSARLFGQNYITVYSPIIENDKIVGILFIGYNFTDGLKALKQQINSMKIGENGYFYAINTKSESYDIHPKVDNSKITFDLDKQILGQKQGMLHIQEDGEAKIVSFQPFNKWNWILVAKANEKDFQAANDKLRNNLIITSFIMTLIIVFIIWTLINQIITKPLNNLIEKARDLSSGDGDLTRHLEIKGNDEIAQASEQINHFIEKVRILICNAKSLSSENSSISHELSTTSLQVEKLVEKSTTIVLDTTNQANRVREDMTISIDQAKNSKEDMTKANGALKTASNAVIALTEEIQKSSVTEIELAQKLNQLSTDAEQVRSVLTVISDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLIEINATINVIVQSIVNSSEQMSHNSEKIEELANTAQQVENSLQESFVIINEVTKITENTVNSYLQTGDEIEIMIHKIGEINKISMENSRSVEEIAGAAEHLSKMTENLNHKLGEFRT
SIO_010081: SJPD1_RS01290
subclass of: SO_0000673
so part of: SJPD1_RS01290
location: complement(237746..239716)
location: region:237746-239716:-1
so has part: feature:237746-239716:-1:exon

WP_096045619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237746-239716:-1:exon

SJPD1_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01295
old locus tag: SJPD1_0261
so part of: sequence
location: 240104..240388
location: region:240104-240388:1
so has part: feature:240104-240388:1:exon
subclass of: SO_0000010

position:240104:1
position: 240104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240388:1
position: 240388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240104-240388:1:exon

SJPD1_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01295
old locus tag: SJPD1_0261
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MAVKITDICIACGACIDECPVEAIVDDSDNPTGADIYYVYADKCVECVGHHDAPACAEACPTEGCIVWDAPYAGQPSRDEISADMRKGTTPCAE
SIO_010081: SJPD1_RS01295
subclass of: SO_0000673
so part of: SJPD1_RS01295
location: 240104..240388
location: region:240104-240388:1
so has part: feature:240104-240388:1:exon

WP_041956163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240104-240388:1:exon

SJPD1_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: ndk
locus tag: SJPD1_RS01300
old locus tag: SJPD1_0262
so part of: sequence
location: 240530..240943
location: region:240530-240943:1
so has part: feature:240530-240943:1:exon
subclass of: SO_0000010

position:240530:1
position: 240530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240943:1
position: 240943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240530-240943:1:exon

SJPD1_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: ndk
locus tag: SJPD1_RS01300
old locus tag: SJPD1_0262
EC number: 2.7.4.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013553268.1
GO function: GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO process: GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside-diphosphate kinase
translation: MENTLSIIKPDAVAKNVIGKIVDRFESNGLKIAAMKKVQLSQADAEAFYAVHASRPFFGDLVKFMISGPVVVMVLEGENAVLKNRDLMGATNPKEAAKGTIRADFADSIDANAVHGSDSLENAKIEIDFFFARREIL
SIO_010081: SJPD1_RS01300
subclass of: SO_0000673
so part of: SJPD1_RS01300
location: 240530..240943
location: region:240530-240943:1
so has part: feature:240530-240943:1:exon

WP_096045620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240530-240943:1:exon

SJPD1_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01305
old locus tag: SJPD1_0263
so part of: sequence
location: 240949..241317
location: region:240949-241317:1
so has part: feature:240949-241317:1:exon
subclass of: SO_0000010

position:240949:1
position: 240949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241317:1
position: 241317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240949-241317:1:exon

SJPD1_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01305
old locus tag: SJPD1_0263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856030.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MKVEFKKVPTTGIHFETSLDEIRFFGEALKIGKTMVRCTGQLEGTLPHLCDRCGENFELTVNERVEVFAQEGLYEDQEGEELLNIIEFFDGSIDLDSILQSEIEAFKSDYHYCGQCEQLKGE
SIO_010081: SJPD1_RS01305
subclass of: SO_0000673
so part of: SJPD1_RS01305
location: 240949..241317
location: region:240949-241317:1
so has part: feature:240949-241317:1:exon

WP_096045621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240949-241317:1:exon

SJPD1_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rpmF
locus tag: SJPD1_RS01310
old locus tag: SJPD1_0264
so part of: sequence
location: 241319..241471
location: region:241319-241471:1
so has part: feature:241319-241471:1:exon
subclass of: SO_0000010

position:241319:1
position: 241319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241471:1
position: 241471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241319-241471:1:exon

SJPD1_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rpmF
locus tag: SJPD1_RS01310
old locus tag: SJPD1_0264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004510349.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L32
translation: MAVPKRRVSKTRGAKRRTHYKVTLPMPVKDSDGTWKMPHRVNKTTGEYKN
SIO_010081: SJPD1_RS01310
subclass of: SO_0000673
so part of: SJPD1_RS01310
location: 241319..241471
location: region:241319-241471:1
so has part: feature:241319-241471:1:exon

WP_041956166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241319-241471:1:exon

SJPD1_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: plsX
locus tag: SJPD1_RS01315
old locus tag: SJPD1_0265
so part of: sequence
location: 241472..242464
location: region:241472-242464:1
so has part: feature:241472-242464:1:exon
subclass of: SO_0000010

position:241472:1
position: 241472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242464:1
position: 242464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241472-242464:1:exon

SJPD1_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: plsX
locus tag: SJPD1_RS01315
old locus tag: SJPD1_0265
EC number: 2.3.1.274
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013461019.1
GO function: GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO process: GO:0008610 - lipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate acyltransferase PlsX
translation: MLTIAIDAMGGDFGPAPIVEGTLQALKERQFKALLVGDINVLKPLIPQEYLAKISFVEASDILDMHEAATNALKRKETSIYKAVDLVKDKVADAVVSMGHSGATMSLATLRIGRLKGVLRPAIATIMPTAVPGKLSLVLDVGANVDCKAEHLAQFAIMGETYAKDVLKIAKPKVGLLSNGEEESKGNEITKEAFAILKKIESFVGNVEGNNVFDGSVDVIVCDGFVGNILLKASEGVADSITKIIKQNVRRSPLAIAGAVLMRKVFKVLKKQVDYAEYGGAPLIGINGCAIIGHGKSNAKAVKNAIYQAINFSSSGINTDIEQKLVLLEQ
SIO_010081: SJPD1_RS01315
subclass of: SO_0000673
so part of: SJPD1_RS01315
location: 241472..242464
location: region:241472-242464:1
so has part: feature:241472-242464:1:exon

WP_096045622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241472-242464:1:exon

SJPD1_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01320
old locus tag: SJPD1_0266
so part of: sequence
location: 242474..243466
location: region:242474-243466:1
so has part: feature:242474-243466:1:exon
subclass of: SO_0000010

position:242474:1
position: 242474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243466:1
position: 243466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242474-243466:1:exon

SJPD1_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01320
old locus tag: SJPD1_0266
EC number: 2.3.1.180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856033.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase III
translation: MYASLKSIGGYAPSRVLSNLDLEKMVETSDEWIEKRTGIKERRIASVEEATSDLGVKAAEKAIERAGITKEEIDLIICATLSPDYFCMPSTACVIAGKLGINDVMAFDISAACSGFVYMLSMAKAFIESGAKKNILLIGAEKISSVVDYTDRGTCILFGDGAGAAIIGATENKNEAILDIHASADGRYGDLLITPGCGSKYPCSQETLDNKLNYIKMQGNDVYKVAVKTLTNDVIEILEKNNITASQIDHFIPHQANMRIIEAVRAKLDFPLEKTILTVAKYGNTSAASIPMAINDAYEEGRIKKGDLMLLDTFGGGFTWASGLVRFGGN
SIO_010081: SJPD1_RS01320
subclass of: SO_0000673
so part of: SJPD1_RS01320
location: 242474..243466
location: region:242474-243466:1
so has part: feature:242474-243466:1:exon

WP_096045623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242474-243466:1:exon

SJPD1_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01325
old locus tag: SJPD1_0267
so part of: sequence
location: 243500..244444
location: region:243500-244444:1
so has part: feature:243500-244444:1:exon
subclass of: SO_0000010

position:243500:1
position: 243500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244444:1
position: 244444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243500-244444:1:exon

SJPD1_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01325
old locus tag: SJPD1_0267
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013553240.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MEVLHALKSEISKVIVGHSKLIDSLIIALLCDGHVLIEGVPGLAKTTTINTLAKALGLSFGRVQFTPDLLPSDIIGAEIYNPKSGEFVVKKGPIFTNLLLADEINRAPAKVQSALLEAMQEYQVTIGDQSLKLPRPFFVLATQNPIESTGTYSLPEAQLDRFMMKLLVGYNTKEEEILMARNVALGIHESIATVLKSTELLSLQNQLKSIHIDPQIENYIADLIFASRKPKMYGLVKLENFIRFGASPRATIDLHKASRAHTLLLGRDFVTPVDVASVCKEVMRHRIILSYEAEAQGISTDSVIDTLIETIPLP
SIO_010081: SJPD1_RS01325
subclass of: SO_0000673
so part of: SJPD1_RS01325
location: 243500..244444
location: region:243500-244444:1
so has part: feature:243500-244444:1:exon

WP_210394394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243500-244444:1:exon

SJPD1_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01330
old locus tag: SJPD1_0268
so part of: sequence
location: 244448..245284
location: region:244448-245284:1
so has part: feature:244448-245284:1:exon
subclass of: SO_0000010

position:244448:1
position: 244448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245284:1
position: 245284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244448-245284:1:exon

SJPD1_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01330
old locus tag: SJPD1_0268
inference: COORDINATES: protein motif:HMM:NF013998.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF58 domain-containing protein
translation: MQTLSYNTIIARSKKHLFGEMVGSNPSSKEGDGYDFSQIRPYMYGDNVKRIDWKQSTKTGQIQLRSFFEEKEITVYVLGLMSGSIHFGIDRMKQEVMAEVVALLGFSAIKNSDFFSLALLSDKLLYESLLSKKEAMIREATYKTLQSPVIAQQLNWNFIQHYALHRIKKPSLLFILSDFFEMPILDAIAKKHSVVVIKIRDHFEEKPTALGSLSIKDPTSLREEKVMLDAAIIKAYTVRQEQFDQHLQGYFKKQGIAQISLYTNEDPYIKLSSILREM
SIO_010081: SJPD1_RS01330
subclass of: SO_0000673
so part of: SJPD1_RS01330
location: 244448..245284
location: region:244448-245284:1
so has part: feature:244448-245284:1:exon

WP_096045625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244448-245284:1:exon

SJPD1_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01335
old locus tag: SJPD1_0269
so part of: sequence
location: 245284..245661
location: region:245284-245661:1
so has part: feature:245284-245661:1:exon
subclass of: SO_0000010

position:245661:1
position: 245661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245284-245661:1:exon

SJPD1_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01335
old locus tag: SJPD1_0269
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MESLKDIKGLVSIPDFSWMVLLIIILCILGIFGWFLWKIKSSQKVLTPKEEALVVLKTVNMEDAKECAYALSQWGALIVDDTNRAQFEILQDELSYYKYRSYEAPLKVKEKVLWQAFLGMNDVHV
SIO_010081: SJPD1_RS01335
subclass of: SO_0000673
so part of: SJPD1_RS01335
location: 245284..245661
location: region:245284-245661:1
so has part: feature:245284-245661:1:exon

WP_096045626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245284-245661:1:exon

SJPD1_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01340
old locus tag: SJPD1_0270
so part of: sequence
location: 245648..246556
location: region:245648-246556:1
so has part: feature:245648-246556:1:exon
subclass of: SO_0000010

position:245648:1
position: 245648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246556:1
position: 246556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245648-246556:1:exon

SJPD1_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01340
old locus tag: SJPD1_0270
inference: COORDINATES: protein motif:HMM:NF012321.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MFTFEYPYLFLGLLVFIVCAFTCKEKHSTIYMPHLLSLPLHVKTNHLHAILKWLGISMLFTALASPVIQSKEEQLRLSHSILLLLDVSESMHKEMFDRTMMKSKFVLSKELAASFIEKRKMDNIGVIVFGDFAYVATPLTYDYESASMIVQNLEEGIAGKKTAMYDALFLATRLLQNNSAKEKVVVLLTDGFNTTGNIPLDAALRALESEKIKVYAIGIGREGEFDEGVLSLLAQKSGGAFFKANNAKTLEEIYTKIDAMEQSLQHSSGKYHYQYLYMYPLLIAFLALLGYGKLAFRQNVCN
SIO_010081: SJPD1_RS01340
subclass of: SO_0000673
so part of: SJPD1_RS01340
location: 245648..246556
location: region:245648-246556:1
so has part: feature:245648-246556:1:exon

WP_168171303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245648-246556:1:exon

SJPD1_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01345
old locus tag: SJPD1_0271
so part of: sequence
location: 246547..248145
location: region:246547-248145:1
so has part: feature:246547-248145:1:exon
subclass of: SO_0000010

position:246547:1
position: 246547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248145:1
position: 248145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246547-248145:1:exon

SJPD1_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01345
old locus tag: SJPD1_0271
inference: COORDINATES: protein motif:HMM:NF012321.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MQLESPYFLLLLPLLVLWWKILHSPKEHAIFSQEILEKLLVEKKSASQQPKLFLAALILMVIALARPTLHVNKEAAIQMHVTSTLAIAIDISNSMLARDIYPSRLDFSKVAVQKIFEKLDGFKFALLAFSNDGYLVAPLSEDRASLNFLLKHLSTETLSSEGSSIPSAILSAQKIFVPLKEGNKELLIITDGADGDKIEEAIALANDEQIHVYLLLVGTTQGAVIYRAKDKGEALKDQKGNIVITKRADSMKELALKTGGAYVTTSGDLSEIPWLSEQIALKASKQSVQKEQPYEAIELFYYFLGMALMLLFFAFHALHVKRLMPLIMLLLGTSPAHSGILDWWEIEQAKNAYEKGSYDKSVRLYENVKAAKQSDASAYNLANALYKAKQYEQALHLYEGIQEETLQRQVLHNQGNSLTQLGRIDDAIKVYEKALSIEEDEDTRYNLEYLKQQKDQKSQEQNQSEESPQHEQQEPQKENHNNEKNKDKISPKPMDEQEAKKWERALMQKEPVTKPVILYKSNKMENNNAIAW
SIO_010081: SJPD1_RS01345
subclass of: SO_0000673
so part of: SJPD1_RS01345
location: 246547..248145
location: region:246547-248145:1
so has part: feature:246547-248145:1:exon

WP_096045628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246547-248145:1:exon

SJPD1_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01350
old locus tag: SJPD1_0272
so part of: sequence
location: 248129..249550
location: region:248129-249550:1
so has part: feature:248129-249550:1:exon
subclass of: SO_0000010

position:248129:1
position: 248129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249550:1
position: 249550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248129-249550:1:exon

SJPD1_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01350
old locus tag: SJPD1_0272
inference: COORDINATES: protein motif:HMM:NF024973.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BatD family protein
translation: MRLRGSLGLFFILTLELFGAHAFLLQPSIEQGESVTLVLSAKGESIKFPTIDQIDGFTVVSHQNRQSIELNNGVVTKQLDHYVTFYPDRNVTIPAYEVIVDGKKELTESLHLPFVQKVVTSAHKEPFSFEMKVSNTTPMRHEGVKLSFIFKRNKNENLVDMRFLKPTLEGFWVKEVGKDNPHVEGDDVVHTVQYMIYPQKSGEQHIVPAKIEIARQVASREMFINQIQWKSISSNDLTLHVKPLEGADLLGEFAMEMQIDKEEITSNEALNVIVKITGEGNFDDIEPFTLNLPNATVFSDTPKVTTWMEGEKLKGEFVQKFAINAQKSFEIAPLQLRFYHLSRKHIESVATDAKIIKVLGETVSSPSEKGVAEEEKIYTEMPIKWQFDLRSFAFGLGGATLVVLLVGVLYRFKKIKIIPRRMQQRDVLQKLLKYQSQNEAVDCWIEKLEANLYRGGKHPINRKAIDTLLEDLV
SIO_010081: SJPD1_RS01350
subclass of: SO_0000673
so part of: SJPD1_RS01350
location: 248129..249550
location: region:248129-249550:1
so has part: feature:248129-249550:1:exon

WP_096045629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248129-249550:1:exon

SJPD1_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01355
old locus tag: SJPD1_0273
so part of: sequence
location: complement(249533..250360)
location: region:249533-250360:-1
so has part: feature:249533-250360:-1:exon
subclass of: SO_0000010

position:249533:-1
position: 249533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250360:-1
position: 250360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249533-250360:-1:exon

SJPD1_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01355
old locus tag: SJPD1_0273
EC number: 1.3.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856034.1
GO function: GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO process: GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prephenate dehydrogenase
translation: MVVGIVGLGLMGGSLGLALQNTKLVSKIVGFDHNLSHCEEALKLGLVHDIVSFAEIKTCDVIFLAIPVGGIIKALQDLKDVQDTTTIIDLGSTKAEIVASVPESIRSNFIAAHPMTGTEKFGPSAAIQNLYHDKVVVLCDTDNSNDLHKNRAIQMFSHIGMKIVFMDPISHDAHASFISHLPHVISYALANSVMGQEDPKSILALAAGGFRDMSRVAKSSPQMWSDIFRQNKTNLLSSIEVFEQELEKSKKMIEEEDWRGLEAWMSKATTLHKIL
SIO_010081: SJPD1_RS01355
subclass of: SO_0000673
so part of: SJPD1_RS01355
location: complement(249533..250360)
location: region:249533-250360:-1
so has part: feature:249533-250360:-1:exon

WP_096045630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249533-250360:-1:exon

SJPD1_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: bamA
locus tag: SJPD1_RS01360
old locus tag: SJPD1_0274
so part of: sequence
location: 250490..252727
location: region:250490-252727:1
so has part: feature:250490-252727:1:exon
subclass of: SO_0000010

position:250490:1
position: 250490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252727:1
position: 252727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250490-252727:1:exon

SJPD1_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: bamA
locus tag: SJPD1_RS01360
old locus tag: SJPD1_0274
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002843186.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamA
translation: MKKITALSLVVATSLFAAPLKSLQFDGLIHLSPEMASEMIDMRAGDSVDMEKIDKAVKTLYKQNYFEDVWIEEVGEGALVVHVKEKPVIAKIDLVGISDSDKDEINKLIGIKKGEVYDVERAEASKLKIIKFYEDKGYFDTVVESKTTPLTEKLSISLDFVINRGENVVIKKVTLCGSKALSYNDVEPNIANKSEEWLPWMWGFNDGKLRTSDIEHDSARIKDTYMQKGYLDCDVSQPFLKTYLDSYTADLVYNVNEGEQYKVGTIGIEIPEGFIDVQAVIAEMNLQNGKVFNVSKLRKDMTLIETKVADQGYAFVKIVPDVKNDKENHIANITYRVMPGEKVYINNVRISGNSRTIDRVVRREIYLANGDMYSRTDVDDTKKALKRTGYFEDVEIKEERISKDRMDIVVNVKEASTGSIGGGIGYGSSDGLLLSASVSDGNIFGSGLRAGIDVERSDSELNGAISLANPRLFDSVYSLSGKIYGADNTYYYYDQKKYGINVVLGRKIARNWGVSLGYIIEQDKLSNLTNELQPYKNILWTDETTIKSSVVPGISFNNTDDYYLPRSGISASSSLEIAGLGGDEKFMSSVNKFATYYGLQDLIDYDLILRYKAQFKYLAINSADEKYSYGEKYYMGGIRTVRGYESNSLSPKLSGTDILIGGNTMLVNTVEASFPLVERLKMRGAIFFDYGMIGEDNLDIKRGGTGVALEWISPLGPIGLVFSQPVMDETGDKKASFEFTIGQKF
SIO_010081: SJPD1_RS01360
subclass of: SO_0000673
so part of: SJPD1_RS01360
location: 250490..252727
location: region:250490-252727:1
so has part: feature:250490-252727:1:exon

WP_096045631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250490-252727:1:exon

SJPD1_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01365
old locus tag: SJPD1_0275
so part of: sequence
location: complement(252793..254259)
location: region:252793-254259:-1
so has part: feature:252793-254259:-1:exon
subclass of: SO_0000010

position:252793:-1
position: 252793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254259:-1
position: 254259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252793-254259:-1:exon

SJPD1_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01365
old locus tag: SJPD1_0275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856036.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ppx/GppA phosphatase family protein
translation: MSKRTAIIDIGSNSARMAIFEKSSRFAFHLIDETKSRVRIGEGAYNFGGVLQEPALKRAFTTLEEFGHIIKGFKCNKVLCIATSALRDAPNASTFINQIHNELNINIKVIEGTKEAYYGAVGALNYLKEMKDAVTIDIGGGSTELARIENGIIVDTISLNIGTVRLKELFFDKKIPLTDIRSFIYKELEKIPEHFTCNDMIGIGGTLRSLSKIIMERTNYPLKTVHGFEYDIATHASFVNAIVSSDVLGLKVLGVRKDRYDTMREGCIIFQSILQKLGCQKMITSGAGIREGAYLCDLLRSSKHKFNPDFKLSLRSFKDRFSIVEDENLYIKKVANLLFDTLSPIHNIPAKYKWELSVAAELLNIGIKLGFYQNQMHSFYFILNNLNYGFSHEQKILIAMLVKYHVNKLPSEEDMNTYKALLPDIQTVQWLSFLLALSKAINSDMSRSKIVFSYQNHTLTIQAEKKLFLAHEQIKQLIKPASFAIIIK
SIO_010081: SJPD1_RS01365
subclass of: SO_0000673
so part of: SJPD1_RS01365
location: complement(252793..254259)
location: region:252793-254259:-1
so has part: feature:252793-254259:-1:exon

WP_096045632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252793-254259:-1:exon

SJPD1_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01370
old locus tag: SJPD1_0276
so part of: sequence
location: complement(254259..254510)
location: region:254259-254510:-1
so has part: feature:254259-254510:-1:exon
subclass of: SO_0000010

position:254510:-1
position: 254510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254259-254510:-1:exon

SJPD1_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01370
old locus tag: SJPD1_0276
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768461.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YfhL family 4Fe-4S dicluster ferredoxin
translation: MSLMITDECIACDACRDECPNGAIEESDPIYIIDPDVCTECVGHYDEPACISVCPVECIVADPDNIESVEELKLKYEQLSSDN
SIO_010081: SJPD1_RS01370
subclass of: SO_0000673
so part of: SJPD1_RS01370
location: complement(254259..254510)
location: region:254259-254510:-1
so has part: feature:254259-254510:-1:exon

WP_087437548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254259-254510:-1:exon

SJPD1_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01375
old locus tag: SJPD1_0277
so part of: sequence
location: complement(254579..255844)
location: region:254579-255844:-1
so has part: feature:254579-255844:-1:exon
subclass of: SO_0000010

position:254579:-1
position: 254579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255844:-1
position: 255844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254579-255844:-1:exon

SJPD1_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01375
old locus tag: SJPD1_0277
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018712891.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MSASATLIVIFSVILYNYIKISIFEDITQELTKQAQIIATSRTSSIERMGINIFDPSLSSINNPNDVQVTIAIRVNQGNVPSFEHSEKDDQKFLTIYYPLEKREHYFISITKDISNTDILLNKILKNILIINLTAIFLILFYALFLSRMLVLPIRSLTNKLASMNENFLQMFDTQKLPSEFQPLGVSINKLVERIQIFVNSQKELFIGAAHELKTPLAVMKTKNEVTLLKPRENEKYIDTLKSNNQTINDMNKMISNILEIGRQEGAQFEKPIEIDLIAFLKEQINNYTILAKMEEKNIIEDIVPISYKITIQPTLLMHILQNFVQNAIKFTPKEGNITIQAYLTKEGFFVCVIDEGIGIDESKDLFAPFKRYGNQTGAGLGLFLAKNAADALGAKITLKNREDTKGTIATLLLPLRKRSL
SIO_010081: SJPD1_RS01375
subclass of: SO_0000673
so part of: SJPD1_RS01375
location: complement(254579..255844)
location: region:254579-255844:-1
so has part: feature:254579-255844:-1:exon

WP_226372218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254579-255844:-1:exon

SJPD1_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: hsrA
locus tag: SJPD1_RS01380
old locus tag: SJPD1_0278
so part of: sequence
location: complement(255868..256539)
location: region:255868-256539:-1
so has part: feature:255868-256539:-1:exon
subclass of: SO_0000010

position:255868:-1
position: 255868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256539:-1
position: 256539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255868-256539:-1:exon

SJPD1_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: hsrA
locus tag: SJPD1_RS01380
old locus tag: SJPD1_0278
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016646529.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homeostatic response regulator transcription factor HsrA
translation: MRILIVEDEVTLNKTIAEGLQEFGYQTDSSENYKDAEYYIGIRNYDLVLTDWMLPDGDGVDLINLIKQKSPRTAAVIISAKDDKESEIKALKAGADDYIRKPFDFDILVARIEARLRFGGTNVIKIDDLTIDPDEEKITYKGQEIELKGKPFEVLTHLARHSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLEISTIETVRRRGYRFCFPKKV
SIO_010081: SJPD1_RS01380
subclass of: SO_0000673
so part of: SJPD1_RS01380
location: complement(255868..256539)
location: region:255868-256539:-1
so has part: feature:255868-256539:-1:exon

WP_012856039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255868-256539:-1:exon

SJPD1_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01385
old locus tag: SJPD1_0279
so part of: sequence
location: complement(256619..256954)
location: region:256619-256954:-1
so has part: feature:256619-256954:-1:exon
subclass of: SO_0000010

position:256619:-1
position: 256619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256954:-1
position: 256954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256619-256954:-1:exon

SJPD1_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01385
old locus tag: SJPD1_0279
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768463.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroneopterin aldolase
translation: MQIIIENLTFETIVGILEKERHTSQKVVLHVKISYDYDGNNVIDYAKVSAFLETEMNQLRYLLLEDALIDLSQKLKILYPQMSKIKLKIFKPDILSNAMVGVSHTVDYTKN
SIO_010081: SJPD1_RS01385
subclass of: SO_0000673
so part of: SJPD1_RS01385
location: complement(256619..256954)
location: region:256619-256954:-1
so has part: feature:256619-256954:-1:exon

WP_096045634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256619-256954:-1:exon

SJPD1_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: plsY
locus tag: SJPD1_RS01390
pseudo: true
so part of: sequence
location: complement(256954..257579)
location: region:256954-257579:-1
so has part: feature:256954-257579:-1:exon
subclass of: SO_0000010

position:257579:-1
position: 257579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256954-257579:-1:exon

SJPD1_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: plsY
locus tag: SJPD1_RS01390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004510921.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO process: GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycerol-3-phosphate 1-O-acyltransferase PlsY
SIO_010081: SJPD1_RS01390
subclass of: SO_0000673
so part of: SJPD1_RS01390
location: complement(256954..257579)
location: region:256954-257579:-1
so has part: feature:256954-257579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256954-257579:-1:exon

SJPD1_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nadA
locus tag: SJPD1_RS01395
old locus tag: SJPD1_0282
so part of: sequence
location: 257680..258672
location: region:257680-258672:1
so has part: feature:257680-258672:1:exon
subclass of: SO_0000010

position:257680:1
position: 257680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258672:1
position: 258672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257680-258672:1:exon

SJPD1_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nadA
locus tag: SJPD1_RS01395
old locus tag: SJPD1_0282
EC number: 2.5.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856042.1
GO function: GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: quinolinate synthase NadA
translation: MDNHTLKKEILKLKHELHVSIVAHFYQKDEVFELADFSGDSLQLAQWAAKDTNPYLVFCGVGFMGQSVKILAPEKRVFMPKIACCAMARMIDVDYFDQNVALLEKAGIKKEDILPVTYINSSADVKAAVGKMNGYVCTSSNAKKIIMKALESHKKILFVPDRCLGQNIAKEMGLKSCVVGDGNDPKEADILCYNGFCSVHQLFDVDDIAFYRAKYPDILIVTHPECKPEVCDLSDFVGSTSQIIDYVKKLPSEQKVAIGTEYNMIKRLRTENTYVLSSSKPECPTMNETTLQDVYNVLLSIKEERFENEITILEETRKWAHTALNRMFEL
SIO_010081: SJPD1_RS01395
subclass of: SO_0000673
so part of: SJPD1_RS01395
location: 257680..258672
location: region:257680-258672:1
so has part: feature:257680-258672:1:exon

WP_096045635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257680-258672:1:exon

SJPD1_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nadC
locus tag: SJPD1_RS01400
old locus tag: SJPD1_0283
so part of: sequence
location: 258669..259499
location: region:258669-259499:1
so has part: feature:258669-259499:1:exon
subclass of: SO_0000010

position:258669:1
position: 258669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259499:1
position: 259499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258669-259499:1:exon

SJPD1_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nadC
locus tag: SJPD1_RS01400
old locus tag: SJPD1_0283
EC number: 2.4.2.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856043.1
GO function: GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO process: GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxylating nicotinate-nucleotide diphosphorylase
translation: MIKKFVKKALEEDVGRGDLFSLVGKDSFASANIICKDRGVFAGKPYVKALCKMNKLDVTFYFEDGDTLQKGDVVALIEGKSKNILRCERTILNLMQHASGIATNVARYKKMLEGYALKLLDTRKTRPHLRIFEKYAIRCGGGNNHRMGLDDCLMIKDTHLKTIDDLKIFIVEAREKLPFTCKIEIESEDVEFAKFAMQCGADIVMCDNMSHEDIQAVVAYKNNHFPHVLLEASGNITQENIVAYAKTGVDAISSGSLIHQAVWLDFSMKITHKTVI
SIO_010081: SJPD1_RS01400
subclass of: SO_0000673
so part of: SJPD1_RS01400
location: 258669..259499
location: region:258669-259499:1
so has part: feature:258669-259499:1:exon

WP_096045636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258669-259499:1:exon

SJPD1_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: flhB
locus tag: SJPD1_RS01405
old locus tag: SJPD1_0284
so part of: sequence
location: 259517..260575
location: region:259517-260575:1
so has part: feature:259517-260575:1:exon
subclass of: SO_0000010

position:259517:1
position: 259517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260575:1
position: 260575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259517-260575:1:exon

SJPD1_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: flhB
locus tag: SJPD1_RS01405
old locus tag: SJPD1_0284
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768467.1
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FlhB
translation: MADDQEKTEEASSKKIEDARNDGNVPKSQDTSAFITLIVALAVFLVMFPWIESRTVYLYRYYHSLMGVEITKEVTLQLSIISFREIIFMVIPLALAVSVAGVLANVLQTGLIFTTKPLIPDFSKIDPMKGLKNLFSMKKLVETLKIIIKVGMILWVCYYFLLSFTKELPTVIAFPLYEQMGWLKHKMIILISVILILFLVLALADLLFVRFSYFKSLRMSKQEMKDEYKQMEGDPKIKAKIRQIQMQMTKKRMMQEIPQADVIITNPTHYAIAIRYNQDKEAAPKVIAKGTDFMALRIKEIAMNYNIQIVENPPLARELYKKCNLGDIIPENLYKAVAEVLAFVYKSSNKSR
SIO_010081: SJPD1_RS01405
subclass of: SO_0000673
so part of: SJPD1_RS01405
location: 259517..260575
location: region:259517-260575:1
so has part: feature:259517-260575:1:exon

WP_096045637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259517-260575:1:exon

SJPD1_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01410
old locus tag: SJPD1_0285
so part of: sequence
location: 260642..261586
location: region:260642-261586:1
so has part: feature:260642-261586:1:exon
subclass of: SO_0000010

position:260642:1
position: 260642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261586:1
position: 261586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260642-261586:1:exon

SJPD1_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01410
old locus tag: SJPD1_0285
EC number: 3.1.3.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856045.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional oligoribonuclease/PAP phosphatase NrnA
translation: MYQEAWKRMLEADHIVIVSHVHPDGDTLGSALALYDVLTRVGKKVTHYNKNSELPQSYDFLPGYSKIKHILPKSFDLVVSCDCSTRDRLKIPEGDYDIINIDHHVTNHYFGYMNLVIDRFTSAGMVVYELLKANTIEISKECAICLYTAIADDTGFFLYGDMDEATFKIVAQLVKCGANPQEIASKVKRREPLSKIRLYGYMLNHFDLYENGRIATIIFDKATLEATGARRHDTKNIVNMLRSIVNVTIAIMILEEKEGGYKVSLRSKDINVSKIALAYQGGGHKTAAGFEVSTCDPKALRDEIVEKIKRIDKE
SIO_010081: SJPD1_RS01410
subclass of: SO_0000673
so part of: SJPD1_RS01410
location: 260642..261586
location: region:260642-261586:1
so has part: feature:260642-261586:1:exon

WP_096045638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260642-261586:1:exon

SJPD1_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01415
old locus tag: SJPD1_0286
so part of: sequence
location: 261583..262953
location: region:261583-262953:1
so has part: feature:261583-262953:1:exon
subclass of: SO_0000010

position:261583:1
position: 261583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262953:1
position: 262953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261583-262953:1:exon

SJPD1_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01415
old locus tag: SJPD1_0286
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MKQQRKSSIAAYTLGFIFLVLVGGVTYLYNSSLFERETPKITLVKEIEWNLKDPIKVQVEDNSGLRFVRASLFDGEKSVVLDTKEFKTPEKVIDLNLTFPKTGFGANKKAFELTIEATDASKWNFFAGNSVSEKSIIKVDTKRPEVNVIGSSYKIMRGGVATVIFKAQDEAMKSLYIETNFGKKFYPTPFYKDGYYISLVAWPTHIESFSASVVAIDRAGNLTKAHIPYFLQDKKYKTSTIALEDRFLDGKIADLISEVAPERSSLNKIEKFKFVNEDMRKGNEANILKVTSDVPKELVSGFYLKAFYPLRNGKVVASFGDHRFYEYDKQPTSESYHLGLDLASNAQATMLTSNDGVVVFARENGIYGNNIIISHGLGVYSLYGHCSSFMVKEGDVVKAGEPIAKTGMTGLALGDHLHFGMFVQGVDVRPEEWMDDVWLKESVFNVIESAKKIMDR
SIO_010081: SJPD1_RS01415
subclass of: SO_0000673
so part of: SJPD1_RS01415
location: 261583..262953
location: region:261583-262953:1
so has part: feature:261583-262953:1:exon

WP_096045639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261583-262953:1:exon

SJPD1_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01420
old locus tag: SJPD1_0287
so part of: sequence
location: 262950..263546
location: region:262950-263546:1
so has part: feature:262950-263546:1:exon
subclass of: SO_0000010

position:262950:1
position: 262950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263546:1
position: 263546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262950-263546:1:exon

SJPD1_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01420
old locus tag: SJPD1_0287
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856047.1
GO process: GO:0000902 - cell morphogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum site-determining protein MinC
translation: MKVTQKNVRVFHIEIDDEASFLEYFRKNTLLLKEFFLLVEGSITKNIAFVLEQSGVCYKEINNCTIRFGGIKKEAPLVEEEPKKEVISEVLSEPQQLPKLKLYDRPIRSGEEIIESLPIVIFGRVNSGAKVFCEESMSIYGIIDGLVQCDGEYIVLSGISPRGHLIFNGEIVDRERLKQNVLQKIIVRDNVIEIKDVG
SIO_010081: SJPD1_RS01420
subclass of: SO_0000673
so part of: SJPD1_RS01420
location: 262950..263546
location: region:262950-263546:1
so has part: feature:262950-263546:1:exon

WP_096045640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262950-263546:1:exon

SJPD1_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: lpxC
locus tag: SJPD1_RS01425
old locus tag: SJPD1_0288
so part of: sequence
location: 263543..264427
location: region:263543-264427:1
so has part: feature:263543-264427:1:exon
subclass of: SO_0000010

position:263543:1
position: 263543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264427:1
position: 264427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263543-264427:1:exon

SJPD1_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: lpxC
locus tag: SJPD1_RS01425
old locus tag: SJPD1_0288
EC number: 3.5.1.108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002869857.1
GO function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-3-O-acyl-N-acetylglucosamine deacetylase
translation: MKQTTLAKAVSGVGIGLHKGTPIQIHLEPLEANSGIIFYRSDVGLLVQALPQNVVNTQMATVIGNSSAYISTIEHLLSAVYAYGIDNIRVVLDGAEVPVMDGSSASFCMMLDEAGIRKLEATKQVLIIKKEVEVQDGKKFARVTPSLKPTYHFMIEFTHPSIGKQEYSFEFSKKNFIEEISRARTFGFLKDVQMLRSRGLALGGSLDNAVVMDDNKILNPEGLRFSNEFVRHKILDAIGDLSLLGAPFVGDYTSYAGSHNLNHELTKAILRDPSNYEIRTLSIEKAQEFEKVYA
SIO_010081: SJPD1_RS01425
subclass of: SO_0000673
so part of: SJPD1_RS01425
location: 263543..264427
location: region:263543-264427:1
so has part: feature:263543-264427:1:exon

WP_096045641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263543-264427:1:exon

SJPD1_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01430
old locus tag: SJPD1_0289
so part of: sequence
location: 264502..264882
location: region:264502-264882:1
so has part: feature:264502-264882:1:exon
subclass of: SO_0000010

position:264502:1
position: 264502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264882:1
position: 264882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264502-264882:1:exon

SJPD1_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01430
old locus tag: SJPD1_0289
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011372306.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTFDAMEQTSEALPLLFEEILKEYTPKRLFFAKGPGSFMAIKITYIFLRALSIALAIPLLACDSFVFNKGKPIRAMRNLYFIKEAKEIKTIRLDNPVEQIFTLPQVLDEALFSYENEPLYMLPAV
SIO_010081: SJPD1_RS01430
subclass of: SO_0000673
so part of: SJPD1_RS01430
location: 264502..264882
location: region:264502-264882:1
so has part: feature:264502-264882:1:exon

WP_226372219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264502-264882:1:exon

SJPD1_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: thrB
locus tag: SJPD1_RS01435
old locus tag: SJPD1_0290
so part of: sequence
location: 264892..265776
location: region:264892-265776:1
so has part: feature:264892-265776:1:exon
subclass of: SO_0000010

position:264892:1
position: 264892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265776:1
position: 265776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264892-265776:1:exon

SJPD1_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: thrB
locus tag: SJPD1_RS01435
old locus tag: SJPD1_0290
EC number: 2.7.1.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002947519.1
GO function: GO:0004413 - homoserine kinase activity [Evidence IEA]
GO process: GO:0009088 - threonine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homoserine kinase
translation: MKIKIPATSANLGPGFDCLGLAIALYNEVSIKPSSYQSISVKGEGEENAKLKKNNIFVSIFYDIYQELVGKKDLFRFEFYNNIPFSRGLGSSSAVIVGAIASAYEMAGVKASKENILNKAILYETHPDNIAPAVYGGFTSSIVEHGKVKTLRKELSAKLKVVMVIPDRPMSTAQSRTLLPKSYLMKNTVYNLSRASLLTAAFFSENWEFLKVASRDCMHEHRRMKQLKELFEVREIALKNGALMSTLSGSGSSFFSLVRAEDAQKVATALKNAFGMFRVEIFDLDNNGFEIVKS
SIO_010081: SJPD1_RS01435
subclass of: SO_0000673
so part of: SJPD1_RS01435
location: 264892..265776
location: region:264892-265776:1
so has part: feature:264892-265776:1:exon

WP_096045643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264892-265776:1:exon

SJPD1_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: infB
locus tag: SJPD1_RS01445
old locus tag: SJPD1_0291
so part of: sequence
location: 266056..268719
location: region:266056-268719:1
so has part: feature:266056-268719:1:exon
subclass of: SO_0000010

position:266056:1
position: 266056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268719:1
position: 268719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266056-268719:1:exon

SJPD1_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: infB
locus tag: SJPD1_RS01445
old locus tag: SJPD1_0291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011992627.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-2
translation: MDKVRIAEIAKELGMKNKDIIEKAMGIGLDVKGHASAITTEDAEKLINYILGGENAQASKPSAQPKTPEIKKVEVVEIPPLPVVEKPIVHEVITPKTKTLKEKELETGVIAKAVLHDDEIAKVALEASGDAEEDMEEKLDPTNVRKRRGLVIVKKKRPDVKEVEVQEKESPSSFYGSRENTPSRSIESMFSSSNAASELQKKKKKVKKVPAEKKANAEKLDLTLNIEMADTNIDTEEEDMIVLPDLNVGITINEEAKKKKQIDPSQIRTTKKTNFVMQGIQRVGRKRRRRPSQVQEVEAISAIEIPEEIRVYEFAEKINKSVSEVIKELFSLGVMFTKNDFLDKDSIEILADTFGVNVTTVNDQEAFDYVKAYDEEGEAGEQHLVERAPVITIMGHVDHGKTSLLDYIRSAKVAAGEAGGITQHVGAYMVEKNGRNITFIDTPGHEAFTEMRSRGAKVTDIVIVVVAADDGVKPQTKEAIEHAKAAGVPIIIAVNKMDKEAANPDLVKAQLAELGITPIDWGGEHEFVPVSAKTGMGIEDLLETILLQADLLELKADPSREVKATVIESSLEKGRGPVATVVIEDGTIRVGDIVVAGIAFGKVKALLNDLGQSVKEALPGEPVVVLGLSEVPGAGETLISVKTDKIAREYAKKKAEYLRQKELSKTTKVSLDDLSAMIAEGALKTLPVIIKADVQGSLEAIKGSLEKIRNSETKVHIVSAGIGGITESDVALASASSDCIILGFHVRPTGIVKEKARSAGVEIKTYNIIYDLIDDVTNLVTGLMAPVIREENIGQAIVREVFAVPKLGHIAGCIVTDGTINRGVKIRVIRDGVIIYEGSVSSLKRFKDDVKEVGKGYECGVGIEGYTDIKVGDYIESFKEVEEKAKL
SIO_010081: SJPD1_RS01445
subclass of: SO_0000673
so part of: SJPD1_RS01445
location: 266056..268719
location: region:266056-268719:1
so has part: feature:266056-268719:1:exon

WP_096045644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266056-268719:1:exon

SJPD1_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rbfA
locus tag: SJPD1_RS01450
old locus tag: SJPD1_0292
so part of: sequence
location: 268716..269093
location: region:268716-269093:1
so has part: feature:268716-269093:1:exon
subclass of: SO_0000010

position:268716:1
position: 268716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269093:1
position: 269093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268716-269093:1:exon

SJPD1_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rbfA
locus tag: SJPD1_RS01450
old locus tag: SJPD1_0292
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768476.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosome-binding factor RbfA
translation: MIDKSIKIQRTQSVLRELIPEALSTLEDEMLRGVCVIDVECSRGKYDAIVYLDGSVYDEAEKRYILSHLDRVQRHIQTHCMQAEGWFRCPNFRFRFDDSLERQNKMDALFAKVEEELKKGKNNDA
SIO_010081: SJPD1_RS01450
subclass of: SO_0000673
so part of: SJPD1_RS01450
location: 268716..269093
location: region:268716-269093:1
so has part: feature:268716-269093:1:exon

WP_096045645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268716-269093:1:exon

SJPD1_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01455
old locus tag: SJPD1_0293
so part of: sequence
location: 269086..269514
location: region:269086-269514:1
so has part: feature:269086-269514:1:exon
subclass of: SO_0000010

position:269086:1
position: 269086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269514:1
position: 269514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269086-269514:1:exon

SJPD1_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01455
old locus tag: SJPD1_0293
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768477.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome maturation factor RimP
translation: MLDKEQMVKIVESCGVSLYDTEVVSEFDKRIFRLYITSKEGISLDKCVEVSRILSPIFDLEPPLEGEYLFEVSSPGIERKLTKPEHFTASIGEKVKVKLNSKEKFIGLLEAFTHNVASVRVENELKQILLDEIESIRTYFEW
SIO_010081: SJPD1_RS01455
subclass of: SO_0000673
so part of: SJPD1_RS01455
location: 269086..269514
location: region:269086-269514:1
so has part: feature:269086-269514:1:exon

WP_096045646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269086-269514:1:exon

SJPD1_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: ribD
locus tag: SJPD1_RS01460
old locus tag: SJPD1_0294
so part of: sequence
location: 269508..270524
location: region:269508-270524:1
so has part: feature:269508-270524:1:exon
subclass of: SO_0000010

position:269508:1
position: 269508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270524:1
position: 270524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269508-270524:1:exon

SJPD1_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: ribD
locus tag: SJPD1_RS01460
old locus tag: SJPD1_0294
EC number: 1.1.1.193
EC number: 3.5.4.26
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856054.1
GO function: GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
translation: MVSAFDTVLMQKALDAAWAYQVLTFPNPAVGAVVSNGQGDVLGIGAHQKAGMPHAEVLALKAAYETLTEDRRIHTIEDATELHTFLKEHHNSLFHNLTLHVTLEPCHHFGRTPPCSGLIDALGIKRVVIGSFDESNTAKGGGAFLQEKGVNVTFGVLKEKCDLLLTPFTCKEKKRSFIFFKLAVSSNGVATGGIITSLDSRKMVHNLRNCCDLLVIGGNTVRTDRPILDARLCHGKAPNILIFSKQKSFDVTIPLFNVPHRSVMIEETLDKINDYSMVMIEGGQRMLDALSKEVKWYLIFESPRAKEGEAIILPRGLQKIFSQKVGEDTMSWYYMHGE
SIO_010081: SJPD1_RS01460
subclass of: SO_0000673
so part of: SJPD1_RS01460
location: 269508..270524
location: region:269508-270524:1
so has part: feature:269508-270524:1:exon

WP_096045647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269508-270524:1:exon

SJPD1_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01465
old locus tag: SJPD1_0295
so part of: sequence
location: 270514..271260
location: region:270514-271260:1
so has part: feature:270514-271260:1:exon
subclass of: SO_0000010

position:270514:1
position: 270514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271260:1
position: 271260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270514-271260:1:exon

SJPD1_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01465
old locus tag: SJPD1_0295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856055.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfite exporter TauE/SafE family protein
translation: MENDFFIFEILIVLLAGFFHGIVGFGFPMIATPLFVLFLDLKQAVLYTLFPTLVTNVVSLKKANSFSDIWQRFWLLILSVMIGSIVGTYLLVAYYSHYYKLILAGVMLLYLNKERLHLSLTRAVAEQKNMTTIIMGVLSGLVGGMANIMSPVLIMLILEFKLDKKRAIGVMSFCFIANKTLQILIFGYHGSFNMENSALIMLFVFISLIGFWIGNKIHERIDEKLYTAILNKILWVISFYLIYSTFYM
SIO_010081: SJPD1_RS01465
subclass of: SO_0000673
so part of: SJPD1_RS01465
location: 270514..271260
location: region:270514-271260:1
so has part: feature:270514-271260:1:exon

WP_096045648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270514-271260:1:exon

SJPD1_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01470
old locus tag: SJPD1_0296
so part of: sequence
location: complement(271251..271565)
location: region:271251-271565:-1
so has part: feature:271251-271565:-1:exon
subclass of: SO_0000010

position:271251:-1
position: 271251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271565:-1
position: 271565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271251-271565:-1:exon

SJPD1_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01470
old locus tag: SJPD1_0296
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF309 domain-containing protein
translation: MIAIEEFIKVVSKEQFVEGHEVLEIEWHRLKKLPDYADEAKILKGLINASTALALACKGKKEGALQVWQTYEKYAPLISKTLSLAKPRYEEAQKLLLAKKNLYM
SIO_010081: SJPD1_RS01470
subclass of: SO_0000673
so part of: SJPD1_RS01470
location: complement(271251..271565)
location: region:271251-271565:-1
so has part: feature:271251-271565:-1:exon

WP_096045649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271251-271565:-1:exon

SJPD1_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01475
old locus tag: SJPD1_0297
so part of: sequence
location: complement(271567..274074)
location: region:271567-274074:-1
so has part: feature:271567-274074:-1:exon
subclass of: SO_0000010

position:271567:-1
position: 271567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274074:-1
position: 274074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271567-274074:-1:exon

SJPD1_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01475
old locus tag: SJPD1_0297
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MKIAKTYALYSTIILSFTLIFITSVWFVKKTQEESQIVQEQSSVFERYKAVLNLEKSVLRQISLNYSRLDEIKAFINTPDLAKSKDHLEPLLSTFGLHYIFILDASKKQVYTHKSDEVQNINLDLSSFNASSSSLREFYHFENGTFVQFFLTPIYASSHLVQAGNPIGFLLLGRLFDQAFLTNMEHMTLGYATLFQKENHPFGDQHFELPLFSLQNEVIGYLDFNYSPSLLLFMNEFQNTTALIGFIIILSAIVLFYFLTQHIIFIPIKRISMALKSHNLNYIAALSRQKDELGEIAHLIYDHEKQTNLLEHYKEAVDENTIVSKTNTKGIITYANKQFIAISGYNESELLGKPHNIVRHPDNPPSFFKEMWTTLKEGKTWKGVVKNRRKDGTAYYVKSVIMPLFDDQGNIQEYIAIRYDVSELFEQVDHLRKDKLIELPSRKVLLEAIEHASNPHLAILNISGFRDINTLHGQAFGDLYLRHLAITIKQLMSKSWQFFHLHSDEFALYCDTSIPDNTFNDECHHILTILNHEGLLIQNTFYPLSLRCGIANGASYLYNRAEIAMKEARISHKAFVIYDDNKGFEERLQKDIQWNETLMSALKENRFTIFFQEIVPLHVKEPSRKKYEVLIRLIDAKGNIISPYHFIDLSKRIHLYDQLTRFVMQEGFRAAVELYCDISINITQEDILTSDTVQLLFDLLKQYPSLKGHITLELVESEGLENSAEVQTFLQQAKEHGCLLAIDDFGSGYSNFEYLLRLNVDFIKIDGSLIKHLDTDDNAYATVKTIAHFARNLGILVVAEFIHNKDILEKVQELGIEFGQGFYLHEPSPKPKLKK
SIO_010081: SJPD1_RS01475
subclass of: SO_0000673
so part of: SJPD1_RS01475
location: complement(271567..274074)
location: region:271567-274074:-1
so has part: feature:271567-274074:-1:exon

WP_096045650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271567-274074:-1:exon

SJPD1_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01480
old locus tag: SJPD1_0298
so part of: sequence
location: 274263..274478
location: region:274263-274478:1
so has part: feature:274263-274478:1:exon
subclass of: SO_0000010

position:274263:1
position: 274263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274478:1
position: 274478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274263-274478:1:exon

SJPD1_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01480
old locus tag: SJPD1_0298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011373133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MALLEGTVKWFNNEKGFGFIQPNDGGKDVFVHFRQVNRSGYGRVSLAEGQKVTYELGEGPKGPQAENVTAL
SIO_010081: SJPD1_RS01480
subclass of: SO_0000673
so part of: SJPD1_RS01480
location: 274263..274478
location: region:274263-274478:1
so has part: feature:274263-274478:1:exon

WP_025343528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274263-274478:1:exon

SJPD1_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01485
old locus tag: SJPD1_0299
so part of: sequence
location: complement(274473..275648)
location: region:274473-275648:-1
so has part: feature:274473-275648:-1:exon
subclass of: SO_0000010

position:274473:-1
position: 274473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275648:-1
position: 275648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274473-275648:-1:exon

SJPD1_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01485
old locus tag: SJPD1_0299
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768481.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MQSETKNAFIFAIILTLLTLLLVSFPILNYLSVSLRLSQVNQEVQLRSYAKEIESTIQSILPLQKTFLFPRSIIFKSALLDANNHIVFSLIEEPIPSFNDEFFKNNSSLFYKQPLAPNALHVKFLIVQKEISHSQVIFDILVIIGIVLVGMLLFSYLLLKLLLKPYIETSTRMNLFFTDVMHELKTPLGIMQLNIEGLVQKYKDKRLSRTLAALSTLSTLYDDLEYLIKNKTITYTTEVLNFSTFLEDRIAYFEALSFSKEISIVAHIDPDQYVCINRIELQRIIDNNVTNAIKYSPPKTTIHVLLKEENQQLFFQVKDQGVGIKEIGKVFERHYRGDIYKGGFGIGLSIVKSICDKYNIVIEVKSEEAKGSVFSYWFKKEVEERISPEEL
SIO_010081: SJPD1_RS01485
subclass of: SO_0000673
so part of: SJPD1_RS01485
location: complement(274473..275648)
location: region:274473-275648:-1
so has part: feature:274473-275648:-1:exon

WP_096045651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274473-275648:-1:exon

SJPD1_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01490
old locus tag: SJPD1_0300
so part of: sequence
location: complement(275638..276297)
location: region:275638-276297:-1
so has part: feature:275638-276297:-1:exon
subclass of: SO_0000010

position:275638:-1
position: 275638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276297:-1
position: 276297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275638-276297:-1:exon

SJPD1_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01490
old locus tag: SJPD1_0300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MKILLLEDDHTYNESIKDSLEEMGYDVDAFEDGLLALDALFEKQYHLALLDIRVPHMDGYEILKEIRKAKLDLPIIFITSLTDINNLSLGYELGCNDYLRKPFSLKELQYRVSQTLKSYHLHSTLDVIPLTHGFSYHSNDQTLWFEEMQVNLSNYERKLLFVLVKNRGNFISIELIHEYVWEGKEVGENDIRMLIKKLRDKTDKDFIITAKGIGYKIAK
SIO_010081: SJPD1_RS01490
subclass of: SO_0000673
so part of: SJPD1_RS01490
location: complement(275638..276297)
location: region:275638-276297:-1
so has part: feature:275638-276297:-1:exon

WP_096045652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275638-276297:-1:exon

SJPD1_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01495
old locus tag: SJPD1_0301
so part of: sequence
location: complement(276294..277172)
location: region:276294-277172:-1
so has part: feature:276294-277172:-1:exon
subclass of: SO_0000010

position:276294:-1
position: 276294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277172:-1
position: 277172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276294-277172:-1:exon

SJPD1_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01495
old locus tag: SJPD1_0301
inference: COORDINATES: protein motif:HMM:NF026177.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cache domain-containing protein
translation: MIYRANHNLYIEDAKNSVESVLGLTQELISNEKQLALSIALMLSQNETLKEGYLSNDRALLFETLQSEIAKIKQYLQIENLEVQLHTKDAKAYVRSWDFDDYGDDLSTFRKGIALLQQTKMPLVAIELGKRLNIKALCPIYAKETFIGSLEIIISFDEVAQKLNAKKINFVVLMDKELLEVGEWMKELDQIDNYVIVSNSCPSGCINALSTIISTSTLEKGFARQNGVLFGFTPLFDIEAKQVGYIGIWFGEALLKESLLLRASLTPYTTPLHVKTLEPAIQNSEKREVLIR
SIO_010081: SJPD1_RS01495
subclass of: SO_0000673
so part of: SJPD1_RS01495
location: complement(276294..277172)
location: region:276294-277172:-1
so has part: feature:276294-277172:-1:exon

WP_167750041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276294-277172:-1:exon

SJPD1_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01500
old locus tag: SJPD1_0302
so part of: sequence
location: 277365..278369
location: region:277365-278369:1
so has part: feature:277365-278369:1:exon
subclass of: SO_0000010

position:277365:1
position: 277365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278369:1
position: 278369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277365-278369:1:exon

SJPD1_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01500
old locus tag: SJPD1_0302
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768483.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome
translation: MKVDLMLKLALVASCASGLFAFDVGELAKRGDQGFKPVVVKDWQAPDEKTIPNNQFGNDVRYGKALVQETYKYIGPEVADKKMRYAGNNLACNSCHLDAGTKKYSAGFMGVFASFPQYSARENAVGTIEERINGCMQRSMNGKPLPESSKEMKAIVTYMYWLGQGIPVGAKVEGSSLTKVDRKMIMSRAADPIAGEKVYKEMCASCHGDNGQGVKREGKAMGYEFPPLWGKDTYNTGAGMFRLIKAADWIVANMPLGATSDAKILSDAQAYDVAAYINNYDKERPIKANKDKDFPDLKVKAADSDIGPYDDNKTRLQHKVGPYQGIIIPAKKAE
SIO_010081: SJPD1_RS01500
subclass of: SO_0000673
so part of: SJPD1_RS01500
location: 277365..278369
location: region:277365-278369:1
so has part: feature:277365-278369:1:exon

WP_096045654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277365-278369:1:exon

SJPD1_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01505
old locus tag: SJPD1_0303
so part of: sequence
location: 278505..278852
location: region:278505-278852:1
so has part: feature:278505-278852:1:exon
subclass of: SO_0000010

position:278505:1
position: 278505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278852:1
position: 278852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278505-278852:1:exon

SJPD1_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01505
old locus tag: SJPD1_0303
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768484.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrous oxide-stimulated promoter family protein
translation: MTKEKLISDTKTLHRFIQLHCDKKHQDVSKKKGVLEVSFKEESLCELPYHICEECETLFVYGYGKLKNCPHEHKPSCRKCPDPCYEKPMWKKMAQVMSYSGMQLGLTKLRKLFSK
SIO_010081: SJPD1_RS01505
subclass of: SO_0000673
so part of: SJPD1_RS01505
location: 278505..278852
location: region:278505-278852:1
so has part: feature:278505-278852:1:exon

WP_096045655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278505-278852:1:exon

SJPD1_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01510
old locus tag: SJPD1_0304
so part of: sequence
location: 278852..280522
location: region:278852-280522:1
so has part: feature:278852-280522:1:exon
subclass of: SO_0000010

position:280522:1
position: 280522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278852-280522:1:exon

SJPD1_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01510
old locus tag: SJPD1_0304
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768485.1
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR01212 family radical SAM protein
translation: MLPYLSHKAHMQRVYGEALFSIPVNVEFGCPNRERDGSGGCSFCPEHGARAAQIADAKSVEEQIQKALSFAKRRYNAKAFALYIQAYTGTFASLIKQKETYEKLLAFYPFRALHVGTRPDCLSESTLSYLAELNQKIDVVVELGVQTLHDASLKRINRGHDAACSLEAIKRLHVKGLKVYAHLIIGLPYETPQMWKESVQGLVNAGIDGIKFHNLHIIQNTDLAREFSHTPFPLLSEYEYAEALIELLRYVPSHIPILRLATDTPERELIAPKWHMAKGQFGEYVAQTMRYRGIKQGNLVEKELEESDEIPQKINLEDGSTTLWNEIYHDYYHPKAGAIRQAQELFLAHSNLKERLEKSDVKLLEIGFGMGYNTFSAVQLAQTVAQNRLHVKAIDQDRMLLQKASVVISDTLHVKMLDALFTCKCYDDDFAKVEFLNAEARYVLRLLDEQFDVIFLDPFIESNNASLVTLEFFQHLRNLLKPDGVLVASTALQVSQVGLNLAGFDVMVIKDATSDIQGVVATLSSSHILHVKEPYRDIYGIYNDKQIETLHQKSSN
SIO_010081: SJPD1_RS01510
subclass of: SO_0000673
so part of: SJPD1_RS01510
location: 278852..280522
location: region:278852-280522:1
so has part: feature:278852-280522:1:exon

WP_096045656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278852-280522:1:exon

SJPD1_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: phsA
locus tag: SJPD1_RS01515
old locus tag: SJPD1_0305
so part of: sequence
location: 280608..282899
location: region:280608-282899:1
so has part: feature:280608-282899:1:exon
subclass of: SO_0000010

position:280608:1
position: 280608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282899:1
position: 282899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280608-282899:1:exon

SJPD1_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: phsA
locus tag: SJPD1_RS01515
old locus tag: SJPD1_0305
EC number: 1.8.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768488.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiosulfate reductase PhsA
translation: MTQMLSRRGFLKLSSTAAAVASLSSIPGTLGAMEESQKHYKGNAKFTPSICEMCTSSCTIEARVEDGKGVFIRGNPADKGRGGKVCARGGSGFNQLYDPQRLVHPIMRVGERGEGKWKVVSWDEAYTFIAKKLDEIKQKHGAHTVAFTARSGWNKTWFHNLAQAYGSPNLFGHEATCPLAYDLAMDDIFENGVSRDFAKAKYIINPSHNVFEGIVISYARQYMEALEHGAKVISLDPRLSTMAAKASEWHPIRPGHDLPFVLAFIHTLINENLYNKKFVEKYCEGFDELKASVAEYTPEKMALECDISADTIKRMAREFAKAAPKAIFDFCHRVTLTPQELELRRAIMMCNVLVGAVEQEGGYYLNKGAGFYNKFLGEGDAKAPVLKKPKIPAYPKVEFPRIDRIGEKDSEFFLAKKGNGIVTLIPKATLEDLPGVPYRLHGWFIARNNPVMTQSNTETVIKAIKAMDLVVVMDIQVSDTAWYADIVLPDTTYLERDEEFNAGGGKNPSYDVGRQKVVEPIGESRPGWRVAKELAEKMGLSAYFPYKDIEDYRLQQVGDNIDLLAKLKATGMASFGVPLLLQDKKSVAEFVKKYPSAASKVNEEGTIDFPHKIKLFSPELETVSKKGALSYEPYKYKEADELYFINGKSAVRTNGHNGNNLWLNNLCDDASVWIHPKTAERLGIKNGDKIEVSNKYATQKGKALVTKGVREDTVFAYFGFGHISKELKRAYGKGVNSNTLYSPLVSPNSGMNLHVVGVKVKKA
SIO_010081: SJPD1_RS01515
subclass of: SO_0000673
so part of: SJPD1_RS01515
location: 280608..282899
location: region:280608-282899:1
so has part: feature:280608-282899:1:exon

WP_096045657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280608-282899:1:exon

SJPD1_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01520
old locus tag: SJPD1_0306
so part of: sequence
location: 282915..283487
location: region:282915-283487:1
so has part: feature:282915-283487:1:exon
subclass of: SO_0000010

position:282915:1
position: 282915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283487:1
position: 283487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282915-283487:1:exon

SJPD1_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01520
old locus tag: SJPD1_0306
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856069.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MAKKYGMIHDNNLCIGCQACSIACRSENEIPESVYRLQVWVKEEEYPNGTLGYEYHRQSCVQCENTPCVGVCPTKASHITEEGIVLVDVDLCVGCLYCVAACPYQARYVHPVTKAPDKCTFCHDTRLARGEEPACVTVCPTDALIFGDLNDPKSKINQALSSRVTYREKEKLGTNPKMFIVPNHKGGINS
SIO_010081: SJPD1_RS01520
subclass of: SO_0000673
so part of: SJPD1_RS01520
location: 282915..283487
location: region:282915-283487:1
so has part: feature:282915-283487:1:exon

WP_096045658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282915-283487:1:exon

SJPD1_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nrfD
locus tag: SJPD1_RS01525
old locus tag: SJPD1_0307
so part of: sequence
location: 283484..284437
location: region:283484-284437:1
so has part: feature:283484-284437:1:exon
subclass of: SO_0000010

position:283484:1
position: 283484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284437:1
position: 284437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283484-284437:1:exon

SJPD1_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nrfD
locus tag: SJPD1_RS01525
old locus tag: SJPD1_0307
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011138083.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NrfD/PsrC family molybdoenzyme membrane anchor subunit
translation: MNQIWGSIEQYNTVVWHWPIAVYLFLAGLSAGAIISAIVIKWMKGNDVSPSDGIIKAGSILAPVTIGAGLLLLITDLTRPLHFWKLLIHYNFGSVMTLGVLALFAYFPVVILFFMGVFKKELFETGPLQFLAPLANLALAYAKLIESVTLILAVGVGAYTGFLLSAMNSYPLFNTPVLPALFLVSGVSAGISANLVVGLLFFKSSTKDGNVSYLHGLDVKVSFVELFFLFILFVGMFYQGGSAAHVAHAALSTGGLSTLLWLGVIGLGLVLPIGLNFALPHGVKHSHGFVIFNSLIVLIGVMSLRYYILYAGQVFVG
SIO_010081: SJPD1_RS01525
subclass of: SO_0000673
so part of: SJPD1_RS01525
location: 283484..284437
location: region:283484-284437:1
so has part: feature:283484-284437:1:exon

WP_096045659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283484-284437:1:exon

SJPD1_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01530
old locus tag: SJPD1_0308
so part of: sequence
location: 284601..287405
location: region:284601-287405:1
so has part: feature:284601-287405:1:exon
subclass of: SO_0000010

position:284601:1
position: 284601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287405:1
position: 287405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284601-287405:1:exon

SJPD1_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01530
old locus tag: SJPD1_0308
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856071.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MKSINYKYETLEELEKFSRANFSPNDHLFIQLFCGDFDKIKIASILHFLKLTFPKSVIVGSSTAGEIQEGHIQDNTILLAFCWLEKSVAKAYYFADVNFESGQKAATSILSKETKVCIALAHPFGMDDSEDFLKGFNSLRADMPLSGGNAADKFLFQSAFIICEDQILEQGIVLATLSGKSLHVNSAYSLGWTQIGQELTITKVHKGALYEVDHQPIQKIYQHYLGNDILHNIPSSGMEFPFIKTCDEIEVCRSLIGSNEDGSLIFSGHLDEGEKVHFSIGNVEEIIDKAAHIQEQINEKPVETIFVYSCAVRKRFLQKQLNYEFGLLQQIAPTSGFFTYGEFYHSKHKNQLLNVTTTVLTLSESDYIISHPLGKKPDVDGSTLKSLTHLVNTTQHELDVNMNFLNQYKMILDECCIVSKSDIDGCITYASEPFCKVVGYTEEELLGKTHRMFRPSDADPALYANLWETLKRKEIWKGIVRVVIKSGNVHYLQNTIMPIFDEAGNTLEYLCAHFDITDLIVKEQLIEQHFKDELTGFGNREALFHRLRLDHNTKLLILLNLIGFSEINDYLGYDVGDELLKQIAHFLMKSFNSHADVVFRINGDEFAVLLTSQDIKMISTARDNIKQMIHSLEKKVFIIKGYEVVVRINVGVAKGSSDEIYMQSHVALKEAKTHNQAVVFYEANEILKNKTKHNIQIIQKIKTAIDHDCIVPFFQGIYDNKQHKITKYEVLMRLQEEDRHYLSPYSFLDQAKKTRLYGKLTKIMINKSFEYLKDFKVDFSINLTKGDILSTSVKECLYDNIKKYQCAHRVILEIVESEGIENFSEITAFIREVKQLGCRIAIDDFGTGYSNFAYLVKLEVDIIKIDGSLIKDIDTNEISAMTVETIISFAQKMGYEIVAEFVDRESIQEKLLSLHVDFSQGYLFSKPSPIISSF
SIO_010081: SJPD1_RS01530
subclass of: SO_0000673
so part of: SJPD1_RS01530
location: 284601..287405
location: region:284601-287405:1
so has part: feature:284601-287405:1:exon

WP_096045660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284601-287405:1:exon

SJPD1_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: phsA
locus tag: SJPD1_RS01535
old locus tag: SJPD1_0309
so part of: sequence
location: 287553..289838
location: region:287553-289838:1
so has part: feature:287553-289838:1:exon
subclass of: SO_0000010

position:287553:1
position: 287553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289838:1
position: 289838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287553-289838:1:exon

SJPD1_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: phsA
locus tag: SJPD1_RS01535
old locus tag: SJPD1_0309
EC number: 1.8.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856072.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiosulfate reductase PhsA
translation: MDYIQARRDFLKVATTSATASVFLPGSLGALGEVAFKSEDKFIRSICEMCSSRCPMEARVINGKTVLLQGNAFVKEMGTSLCAKGVAGASQLYDPQRLVTPLIRVGKRGENKWKEASWEEALSLIAGKLSALKERYGARSVIFSAKTGEQYDLLCSFASAFGSPNIFSHWSSCPIAIESAFKQTFGEKLHRDFENATYILNFGHNLFEGLDIPLTKAMAQFSANPSKKLVVLDPRFSIIASKANEWYPIKPGSDLAFVLSLLHVWIRDGKYNKNFVEQYTIGFEKLVLSVKETTPQWQQPLTGIDAKVVERLAAEIYEASPKCIIDWGHKATTTKAEYQRTRAILMANILMGNVEKEGGIYFAKTAERVNTLAKEDIVPELDNPYPRPLVNEQRIDQAGEMGALRFVSKRHGSLTAIPEAIMTQTPYEIKGWFLTRHNPLMTVANPQKMKEAMEQLEFIVVNDIYLSDTAMMADVVLPEVTYLERDEGISKNASKSPYYTMRNRIVEPLHHNKSAIEIIRNLAERMGLGSYYPWKNVPELRVYQAKGNDVLLETLLKRGAATFDVPPLLALEPTFVEHFCERYPQSRIWLDKQGTFSHLLQKLKTPSGKIEIYCEEVEKLFKGYGVPSNVDMDVKQGFPYVLTSGKSAVHTNGHTQNIPYLHMLLSTNPIWMHPSTAKVHGLKMGDTFYLENGISKEKATVFITEGIRPDTLFTYMGFGHDAPALKRTHGKGINSSKLLSLESATLCGAMITNVGVNIIKI
SIO_010081: SJPD1_RS01535
subclass of: SO_0000673
so part of: SJPD1_RS01535
location: 287553..289838
location: region:287553-289838:1
so has part: feature:287553-289838:1:exon

WP_096045661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287553-289838:1:exon

SJPD1_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01540
old locus tag: SJPD1_0310
so part of: sequence
location: 289848..290414
location: region:289848-290414:1
so has part: feature:289848-290414:1:exon
subclass of: SO_0000010

position:289848:1
position: 289848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290414:1
position: 290414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289848-290414:1:exon

SJPD1_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01540
old locus tag: SJPD1_0310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856073.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MEKQYRLLYDENLCIGCQACSVACRVEHNVPDDFYRVQVHMQTLGIFPNLGMRYERLSCVMCENPPCVSVCPTHASFQSKDGLVHIDERVCITCKYCILACPYHARFVNPLKNVVEKCNFCYDTRVSKELKPACVTTCPTEALSFGDMRQKNSLVHQKSQKEVLLFPKEHLGTKPKVAFIPSRKGVKS
SIO_010081: SJPD1_RS01540
subclass of: SO_0000673
so part of: SJPD1_RS01540
location: 289848..290414
location: region:289848-290414:1
so has part: feature:289848-290414:1:exon

WP_096045662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289848-290414:1:exon

SJPD1_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nrfD
locus tag: SJPD1_RS01545
old locus tag: SJPD1_0311
so part of: sequence
location: 290411..291379
location: region:290411-291379:1
so has part: feature:290411-291379:1:exon
subclass of: SO_0000010

position:290411:1
position: 290411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291379:1
position: 291379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290411-291379:1:exon

SJPD1_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nrfD
locus tag: SJPD1_RS01545
old locus tag: SJPD1_0311
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856074.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NrfD/PsrC family molybdoenzyme membrane anchor subunit
translation: MSPMWGSVEQYSTIHWSWAIAIYLFLAGLSSGSIIVALLVKWNRHERSNSSIWDAMIKAGAVVAPTAIFLGLLLLVIDLGRPLSFYWLLLRYNVTSVMSLGVLFLLIYTPIVIVFMLLVFERSVIRHPILAPLEGLINLVKSFHSYAKVIEYFLFVAALCVGSYTGFLLSALYAIPLWNSPLLPVIFLTSSLSSGVAVNILVGLLFFKSALNTESIKYLLVLDTRVILTELPLLALFFIGLFYAGGDAPTAAKAALTEGFWAGIFWLGVIGVGLGLPLITVIIALKSHVYRVGYIVTNSMVVVLGVLMLRYYIIYAGQIYFG
SIO_010081: SJPD1_RS01545
subclass of: SO_0000673
so part of: SJPD1_RS01545
location: 290411..291379
location: region:290411-291379:1
so has part: feature:290411-291379:1:exon

WP_096045663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290411-291379:1:exon

SJPD1_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01550
old locus tag: SJPD1_0312
so part of: sequence
location: 291389..292057
location: region:291389-292057:1
so has part: feature:291389-292057:1:exon
subclass of: SO_0000010

position:291389:1
position: 291389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292057:1
position: 292057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291389-292057:1:exon

SJPD1_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01550
old locus tag: SJPD1_0312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856075.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MKILLLEDDYNYNESIKEYLELLGYEVDAFFDGESALDAIMQKCYYLFLLDVKVPKLNGHELIKYIKEANITTPIIIMTSLVDIDNMEIGYQLGCNDYLKKPFELKELELRVKELIKKHYQTSTAGEFRLSCGCVFNFESGELKKKDTTVSLTSKELDLVRFLIRRKNTFCDIELIRENVWEGKEISYADIRMYIRKIRLKVDEEEFIKSSRGLGYRIDILS
SIO_010081: SJPD1_RS01550
subclass of: SO_0000673
so part of: SJPD1_RS01550
location: 291389..292057
location: region:291389-292057:1
so has part: feature:291389-292057:1:exon

WP_096045664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291389-292057:1:exon

SJPD1_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01555
old locus tag: SJPD1_0313
so part of: sequence
location: 292110..293225
location: region:292110-293225:1
so has part: feature:292110-293225:1:exon
subclass of: SO_0000010

position:292110:1
position: 292110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293225:1
position: 293225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292110-293225:1:exon

SJPD1_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01555
old locus tag: SJPD1_0313
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768496.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MPSYFAIQSTIMEEKYKATQEILEWVDAHEKSIFEKERFEIPRSVRFHINIYDETQQLLYKGIQAHLTHSNFKVHVVYPFLYYQKEIQKGSDVFYLVVELQLNYAKIIFIATMLFFIVLFLVYLMSNIFVHSSIYPYKKMQRYMNDFFNDSMHELKTPLGVININVELLSSYVTSSKHLQRIKAATKQMQMTYEDVEYYIKHKKVTYNKEPVNLSEYLNARIAFFEDISVAKSIRLEHDVMPNLMIYISKVELQRIIDNTLSNAIKYSFFQGKVEIKLYLKDEEQCVLSFQDYGQGIKDLYKVFQRFEREDSVQGGFGLGLNIVQNICNKNDIDINIESYENKGSCFTYIFKLDKKKLLDGVDDAEIKGEQ
SIO_010081: SJPD1_RS01555
subclass of: SO_0000673
so part of: SJPD1_RS01555
location: 292110..293225
location: region:292110-293225:1
so has part: feature:292110-293225:1:exon

WP_226372221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292110-293225:1:exon

SJPD1_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01560
old locus tag: SJPD1_0314
so part of: sequence
location: 293222..294070
location: region:293222-294070:1
so has part: feature:293222-294070:1:exon
subclass of: SO_0000010

position:293222:1
position: 293222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294070:1
position: 294070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293222-294070:1:exon

SJPD1_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01560
old locus tag: SJPD1_0314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856077.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cache domain-containing protein
translation: MKEKRFFLSAALMLFFGLIILFLYNKSISYEEEETLKKQMDALLLTLHNKIAETTKVSLASSVILAKSPNVVTCLSEQNREDCLQYLLEIRDSMALAEIFDNARIHLHTKDFKSFIRLWDYNNHNNDDLSTFRHALEKIKLSKHPMQGVEIGRHGMFMRAIAPVFKKDEYVGTIETVVDFKDLNAYFKKDGVEFYVLMKNEYLSIANAASYGEKLMLDNYTIVNQEANGLNFIKEINFQGTGYLKKGDNYVLYTPIVDINGEHIGFFVLTWSESLSLASFKG
SIO_010081: SJPD1_RS01560
subclass of: SO_0000673
so part of: SJPD1_RS01560
location: 293222..294070
location: region:293222-294070:1
so has part: feature:293222-294070:1:exon

WP_096045666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293222-294070:1:exon

SJPD1_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01565
old locus tag: SJPD1_0315
so part of: sequence
location: complement(294060..295325)
location: region:294060-295325:-1
so has part: feature:294060-295325:-1:exon
subclass of: SO_0000010

position:294060:-1
position: 294060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295325:-1
position: 295325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294060-295325:-1:exon

SJPD1_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01565
old locus tag: SJPD1_0315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856078.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: coproporphyrinogen III oxidase family protein
translation: MQSRQSKMITTATSYFMSQYTKHYLHVEKPSLGLPPPPENKKYLLYIHVPFCTMFCPYCSFNKFTYTKEAALIYYRHLREEILHVKELGYDFNYLVIGGGTPLIDEEELITTIELVRKLFSIEHVSCESDPNHINPKTVLQLDGLVDRLSVGVQTFDDTLLKKLGRYEKFGSGEEVYAKIASMLGILPITSVDLIFNFPTQTQKGLIHDLETLKKLSPEQTSVYPLMTSSLVKNSVKKTLGEFSLENEFTFFSTIKKSLKELYPARHGWSFSKESDLIIDEYIIDNEEYVGVGSGSFSFLKDTLYLNEFALDKYATLIQEKASAITKERTFPANSQMYYRLMVDLFNGTLSKKKFTAMFGQSINTALGKELMLLKFAKAIKENKENITTTDYGDYLFLVMMKEFYMGMDRIRNEARKNLIL
SIO_010081: SJPD1_RS01565
subclass of: SO_0000673
so part of: SJPD1_RS01565
location: complement(294060..295325)
location: region:294060-295325:-1
so has part: feature:294060-295325:-1:exon

WP_096045667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294060-295325:-1:exon

SJPD1_RS14820
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS14820
old locus tag: SJPD1_0316
so part of: sequence
location: complement(295334..295468)
location: region:295334-295468:-1
so has part: feature:295334-295468:-1:exon
subclass of: SO_0000010

position:295334:-1
position: 295334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295468:-1
position: 295468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295334-295468:-1:exon

SJPD1_RS14820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS14820
old locus tag: SJPD1_0316
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKIYHHQIVADQTICFATPYTNHMLNVTQNHYNFLYILVRKNK
SIO_010081: SJPD1_RS14820
subclass of: SO_0000673
so part of: SJPD1_RS14820
location: complement(295334..295468)
location: region:295334-295468:-1
so has part: feature:295334-295468:-1:exon

WP_256376040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295334-295468:-1:exon

SJPD1_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01570
old locus tag: SJPD1_0317
so part of: sequence
location: 295671..296267
location: region:295671-296267:1
so has part: feature:295671-296267:1:exon
subclass of: SO_0000010

position:295671:1
position: 295671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296267:1
position: 296267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295671-296267:1:exon

SJPD1_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01570
old locus tag: SJPD1_0317
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLQRLFLMGIGVLISASSLFAADFDWMVSLNMRSHEDPYGYRYSLVDRFGVREPDVMVILSSVYDPADAYMIFRLAELTGRPPEYILRVYHERRHRGWGDIAYFLGIRPDAVEYIELRERYDTRYIYHPRGHYEDRRDMPVRRVYVEPRHYERQPEPQHYEHQPEHRDYDRNERKDHNSQHRDKGDDDRRDDGRDRR
SIO_010081: SJPD1_RS01570
subclass of: SO_0000673
so part of: SJPD1_RS01570
location: 295671..296267
location: region:295671-296267:1
so has part: feature:295671-296267:1:exon

WP_096045668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295671-296267:1:exon

SJPD1_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01575
old locus tag: SJPD1_0318
so part of: sequence
location: 296291..296752
location: region:296291-296752:1
so has part: feature:296291-296752:1:exon
subclass of: SO_0000010

position:296291:1
position: 296291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296752:1
position: 296752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296291-296752:1:exon

SJPD1_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01575
old locus tag: SJPD1_0318
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYKSILLATVSFILVSSSTLIAADFDWMASLNMRSNSDPYGYQAGLASRFGMPESQLSLILNSVGAPADAYMVLRLSELSGRPHEEVLRYYQANKHKGWGVMAKDLGIKPGSSEFKALKAGHDIRDFDDRRDDRDRGDQDHGKDKDHGKKGH
SIO_010081: SJPD1_RS01575
subclass of: SO_0000673
so part of: SJPD1_RS01575
location: 296291..296752
location: region:296291-296752:1
so has part: feature:296291-296752:1:exon

WP_096045669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296291-296752:1:exon

SJPD1_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01580
old locus tag: SJPD1_0319
so part of: sequence
location: complement(296764..297438)
location: region:296764-297438:-1
so has part: feature:296764-297438:-1:exon
subclass of: SO_0000010

position:296764:-1
position: 296764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297438:-1
position: 297438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296764-297438:-1:exon

SJPD1_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01580
old locus tag: SJPD1_0319
inference: COORDINATES: protein motif:HMM:NF015506.2
GO function: GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB family protein
translation: MKRYIHAFTVTLIVYLLGGFALMHHAFLIHKPSSPDVSKEVMAITLYEAQKEESKVLPTPIPPVPTRPLLKTPQKNVLKKEPKVLERQHSVQEQMIVSQESEQPTLEKLTLNEEIKAEATTSEISHQEALHVKQKEYLENLKKRINEHKTYPKIAQNSHIEGRVMVEFTISPKGELLSFTILEGKKIFYKATEEAVQKSFPFLLSEDLFTSMMTFQIELSYTLL
SIO_010081: SJPD1_RS01580
subclass of: SO_0000673
so part of: SJPD1_RS01580
location: complement(296764..297438)
location: region:296764-297438:-1
so has part: feature:296764-297438:-1:exon

WP_096045670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296764-297438:-1:exon

SJPD1_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01585
old locus tag: SJPD1_0320
so part of: sequence
location: complement(297435..297812)
location: region:297435-297812:-1
so has part: feature:297435-297812:-1:exon
subclass of: SO_0000010

position:297435:-1
position: 297435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297812:-1
position: 297812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297435-297812:-1:exon

SJPD1_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01585
old locus tag: SJPD1_0320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011371913.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biopolymer transporter ExbD
translation: MKIRRFETINVVPFIDIMLVLLVIVLTTATFVAKGIIPVDLAQASSAKPLNEQKELIVTITQEEKFFFNDKVVEEGSLERELLEFNEQTPIMINCDKHASFEPFVKLMDLLKQHHYTQIGILTKQ
SIO_010081: SJPD1_RS01585
subclass of: SO_0000673
so part of: SJPD1_RS01585
location: complement(297435..297812)
location: region:297435-297812:-1
so has part: feature:297435-297812:-1:exon

WP_096045671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297435-297812:-1:exon

SJPD1_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: exbB
locus tag: SJPD1_RS01590
old locus tag: SJPD1_0321
so part of: sequence
location: complement(297793..298257)
location: region:297793-298257:-1
so has part: feature:297793-298257:-1:exon
subclass of: SO_0000010

position:297793:-1
position: 297793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298257:-1
position: 298257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297793-298257:-1:exon

SJPD1_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: exbB
locus tag: SJPD1_RS01590
old locus tag: SJPD1_0321
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013326457.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015078 - proton transmembrane transporter activity [Evidence IEA]; GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-system energizer ExbB
translation: MGMISIALLQEIVDYGVIGLLGFMSFITLFFWVERLLFYRALKISHYACKEKLEMDVTNHVHILSTFGSNAPYIGLLGTVCGIIITFYTMGQSGQIDVKTIMSSLALALKATAMGLVVAIPAIFFYNHLVRKIEKILMCWDIAKQSGTDENTSL
SIO_010081: SJPD1_RS01590
subclass of: SO_0000673
so part of: SJPD1_RS01590
location: complement(297793..298257)
location: region:297793-298257:-1
so has part: feature:297793-298257:-1:exon

WP_096047764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297793-298257:-1:exon

SJPD1_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01595
old locus tag: SJPD1_0322
so part of: sequence
location: 298414..299331
location: region:298414-299331:1
so has part: feature:298414-299331:1:exon
subclass of: SO_0000010

position:298414:1
position: 298414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299331:1
position: 299331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298414-299331:1:exon

SJPD1_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01595
old locus tag: SJPD1_0322
EC number: 3.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768500.1
GO function: GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: manganese-dependent inorganic pyrophosphatase
translation: MQTYACGHINPDSDSVVSAIALSYLKTQLGEPCTPARQGEISPETEFILKTFGFEKPLLKNDFSGDNLYITDYSDLAQAPHNLKETNILGIVDHHKLGDITTTTPLECWIRPVGCTNTIVKEMYDHYKIDIPKNIAGAMMLAILSDTVLFKSPTCTKVDTKAVKELAKIAGIEDFKALGMEMFLVKSAVIGASPRALLLRDYKDFEMGGHKIGIGQLEVVDLKVFDGMKEALFADMKAYKEEGGRHTVMLLLTDIMIEGSQFLVVSDDESVVEKAMNTKLVNHEMWVDGVLSRKKQVIPVMEKQF
SIO_010081: SJPD1_RS01595
subclass of: SO_0000673
so part of: SJPD1_RS01595
location: 298414..299331
location: region:298414-299331:1
so has part: feature:298414-299331:1:exon

WP_096045672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298414-299331:1:exon

SJPD1_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01600
old locus tag: SJPD1_0323
so part of: sequence
location: 299342..300118
location: region:299342-300118:1
so has part: feature:299342-300118:1:exon
subclass of: SO_0000010

position:299342:1
position: 299342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300118:1
position: 300118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299342-300118:1:exon

SJPD1_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01600
old locus tag: SJPD1_0323
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768501.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKGTLKRRYLIQNPKEVIVHLATTSSYKQAIHQLYLENHPRHTDHFGVLTFQFSALDQINAFETDAKLHIIKNVSDDKRYKNRYLSLFGLPLNYDFSLHEVFKKCEMIGLKELDFSFSHGMSTQKVLKVLLYREVQFLEYEVVLLLDDDAKALKNLSKIAENIRYILGIGSVVFDSALIQCLQKAFEVFLHHDREKLLQFVQSPHYKTLLLDIRFFLHEQSGFYLLPKSEMPLLFFVKKHLKKEEFRIAKRLKRALY
SIO_010081: SJPD1_RS01600
subclass of: SO_0000673
so part of: SJPD1_RS01600
location: 299342..300118
location: region:299342-300118:1
so has part: feature:299342-300118:1:exon

WP_096045673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299342-300118:1:exon

SJPD1_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: traT
locus tag: SJPD1_RS01605
old locus tag: SJPD1_0324
so part of: sequence
location: 300209..300982
location: region:300209-300982:1
so has part: feature:300209-300982:1:exon
subclass of: SO_0000010

position:300209:1
position: 300209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300982:1
position: 300982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300209-300982:1:exon

SJPD1_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: traT
locus tag: SJPD1_RS01605
old locus tag: SJPD1_0324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002861079.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: complement resistance protein TraT
translation: MKKTTLHVGIALSAALILMSGCATSELQTSARMTQSVFINPVAKDKRTIFVSTKNTSGAPINLENRIIQALYAKGYTIVDDPEMATYVLMTNILFCNKKSENNVATGALMGGAAGAIANSGSNGRSMAAAGLGGAVVGGLIGKATEDTIFQMQVDIVIREKAKGKVMASTGTTGGQAGIRDGQKSGTMNSFGGPIRDADASGKMYSNTYSSSSQSYESDYIEHKTMMFAEATKMNLTLYEATPILEDKIAQQVAGLF
SIO_010081: SJPD1_RS01605
subclass of: SO_0000673
so part of: SJPD1_RS01605
location: 300209..300982
location: region:300209-300982:1
so has part: feature:300209-300982:1:exon

WP_096045674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300209-300982:1:exon

SJPD1_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: ubiE
locus tag: SJPD1_RS01610
old locus tag: SJPD1_0325
so part of: sequence
location: 301147..301866
location: region:301147-301866:1
so has part: feature:301147-301866:1:exon
subclass of: SO_0000010

position:301147:1
position: 301147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301866:1
position: 301866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301147-301866:1:exon

SJPD1_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: ubiE
locus tag: SJPD1_RS01610
old locus tag: SJPD1_0325
EC number: 2.1.1.163
EC number: 2.1.1.201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768502.1
GO function: GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO process: GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
translation: MENNDNKQQKIVQMFNEIAGTYDTANRVLSMGIDIQWRKTACDETFARYTKPIDLIVDVACGTGDMMGYWAKQAKKAGRNIGKILGVDPSTGMTDVGKQKFPEFEFVISEATEIPLPNESADILSISYGIRNVVRRQEAFSEFARVVKQGGYVVILEFTKDEKKGIFFALKDFYLNKVLPILGGIISKNKAAYEYLPNSIEGFLTPSMLQKELDIAGFETEFIKSFSMDISTLVIAKKR
SIO_010081: SJPD1_RS01610
subclass of: SO_0000673
so part of: SJPD1_RS01610
location: 301147..301866
location: region:301147-301866:1
so has part: feature:301147-301866:1:exon

WP_226372222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301147-301866:1:exon

SJPD1_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: xseA
locus tag: SJPD1_RS01615
old locus tag: SJPD1_0326
so part of: sequence
location: 301866..303122
location: region:301866-303122:1
so has part: feature:301866-303122:1:exon
subclass of: SO_0000010

position:303122:1
position: 303122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301866-303122:1:exon

SJPD1_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: xseA
locus tag: SJPD1_RS01615
old locus tag: SJPD1_0326
EC number: 3.1.11.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856084.1
GO component: GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO function: GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO process: GO:0006308 - DNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease VII large subunit
translation: MSQTLSVSSLNNQIKSLLETTFLHVSVEGEVSRPTYHSSGHLYFTLKDADSSISCVMFKGNTRTLKFQVEEGMAVVVHGSISVFSPRGTYQINCTMMEPAGSGALAKAYEQLKVKLGAKGYFEAEHKKSLPRFVSHIALVTSGTGAALQDMLRVATKRWPLVKITLLDTLVQGESAKFSIAKNIARADALVADVIIVGRGGGSVEDLWAFNEEIVADAIFTCKTPVVSAVGHEIDYVISDFVADLRAPTPSAAMEMVLPDSVEMLQHIDGLMEHYSLVFGRILRSKEENLTQLTRLFAKRSIDEKLSLWKNEIGILQSQYNDKIALLYREKSRQVTLLQEQIYFQTRQNLAKKEQLLSSYTIALNSKEPTREQKECYAQVVQKGKKIALEKIAEGEIFELQTPHTILKAKALEKKALN
SIO_010081: SJPD1_RS01615
subclass of: SO_0000673
so part of: SJPD1_RS01615
location: 301866..303122
location: region:301866-303122:1
so has part: feature:301866-303122:1:exon

WP_096045676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301866-303122:1:exon

SJPD1_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01620
old locus tag: SJPD1_0327
so part of: sequence
location: 303132..303899
location: region:303132-303899:1
so has part: feature:303132-303899:1:exon
subclass of: SO_0000010

position:303132:1
position: 303132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303899:1
position: 303899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303132-303899:1:exon

SJPD1_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01620
old locus tag: SJPD1_0327
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSLTVLILAVFSLYADVSSRVIDVPTRERVSERLLILTPEVPKAVVVLFAGGHGGLQLSDDGKFGWGEGNFLMRTRELFAKAGLMVVIVDAPSDRQREPYLNGFRQTKEHVHDISTILTWIKTQTTAPIWLVGTSRGTQSVAYVATENPSDISGIVLTSSILYDAKSDAVPEMKLEKLQMPVLVVHHKEDGCSHCSFDLIPSLMNKLTSTSAKELLVIEGGQTKGDPCNAFGHHGFNGVEQEVVAQIAHWVIAH
SIO_010081: SJPD1_RS01620
subclass of: SO_0000673
so part of: SJPD1_RS01620
location: 303132..303899
location: region:303132-303899:1
so has part: feature:303132-303899:1:exon

WP_096045677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303132-303899:1:exon

SJPD1_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01625
old locus tag: SJPD1_0328
so part of: sequence
location: complement(303896..304084)
location: region:303896-304084:-1
so has part: feature:303896-304084:-1:exon
subclass of: SO_0000010

position:303896:-1
position: 303896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304084:-1
position: 304084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303896-304084:-1:exon

SJPD1_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01625
old locus tag: SJPD1_0328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013460363.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CCE_0567 family metalloprotein
translation: MDEKELKKELARLKRLAVEIAGEIHDIVEDTLWVKYNELPILSDKIVKAIHEAETFKEQHHL
SIO_010081: SJPD1_RS01625
subclass of: SO_0000673
so part of: SJPD1_RS01625
location: complement(303896..304084)
location: region:303896-304084:-1
so has part: feature:303896-304084:-1:exon

WP_096045678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303896-304084:-1:exon

SJPD1_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01630
old locus tag: SJPD1_0329
so part of: sequence
location: 304402..306690
location: region:304402-306690:1
so has part: feature:304402-306690:1:exon
subclass of: SO_0000010

position:304402:1
position: 304402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306690:1
position: 306690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304402-306690:1:exon

SJPD1_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01630
old locus tag: SJPD1_0329
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:NF012707.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MLTSNEKAWLLAHPTINVGMDSEYAPYEWVNQNGDYVGMAVDYLHLLEQKLGIHFKIAKGKSWSEVVELAKKGEIDVLTSIVQTPERLQYFLFSEPYRDTQTMIVDNGEGKFIGNLEHLSGKRVTVEKGYFTQELLTTKYPKIELVLANNILEALTFVMEGKADAYVGDMSAINYAIKNNGLAKLRISGQTEFSSQHRFAFSKNNPMLAAIITKAMASISAEESDTIFNRWIGMRIEQGIHTKTLVKYSIGLACLFILFGYWYYRLHCEIKHRQAAEMREHHRNAVLEMIAKMLPLSNILESIVLNVEEQNPKMLCSILLLDSESKFFSQVIAPRLPTFYNEAIQGISIGLGVGSCGSAAYLKKRVIAENIDTHVYWQPYKEIALRAGLQSCWSEPILSSSGDILGTFAIYHTCPQTPMKTDIAIIEQSANLASIAIEKSISAIKLRESEELYRRLTEEVTDVIWKVDRDLKITYISPADEKFRGYRADEVIGHHVFEMFTPESINIISEKIKQRLEAQQKGMNTEEFVTYEIQHRCKDGRLIWGEIISKPEYNASGEIIGFHGITREITERKAMQDRVQQLAFYDSLTKLPNRILLSERLSYMLAEMKRIQKYSALFFLDLDNFKSLNDTYGHSIGDLLLCQVAQRLQKCVREVDTVARFGGDEFVVILNTLHEDNQVSVEQAHRIAEKILQSVSALYVLNVSHDKSEEKLVEHKCTASIGVLVFKSAEKTPDDLLKQADAAMYKAKEAGKNKISFYEAPF
SIO_010081: SJPD1_RS01630
subclass of: SO_0000673
so part of: SJPD1_RS01630
location: 304402..306690
location: region:304402-306690:1
so has part: feature:304402-306690:1:exon

WP_168171304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304402-306690:1:exon

SJPD1_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01635
old locus tag: SJPD1_0330
so part of: sequence
location: complement(306696..307688)
location: region:306696-307688:-1
so has part: feature:306696-307688:-1:exon
subclass of: SO_0000010

position:306696:-1
position: 306696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307688:-1
position: 307688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306696-307688:-1:exon

SJPD1_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01635
old locus tag: SJPD1_0330
EC number: 3.5.4.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856085.1
GO function: GO:0000034 - adenine deaminase activity [Evidence IEA]
GO process: GO:0006146 - adenine catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosine deaminase
translation: MKELIQKLPKAELHLHIEGTLEPELMFALAQKNHIALPYQNIEEVKQAYNFTSLQSFLDIYYAGANVLINESDFFDLTWAYLLTCKAQNVVHVEIFFDPQTHTMRGIAFKTVVDGITKALAKAEEELGISSFLIMSFLRHLSEADAFETLQQSLPFKDKIIGVGLDSSEVGHPPSKFERVFAACAKVGYKIVAHAGEEGDSSYIWEAINLLHVNRIDHGIRCEEDAKLVDFLIEKQIPLTICPLSNVKLKAVKQMQEHNIVKLLRQGVLVTINSDDPAYFGGYINENYEAVMQSLHVNKEELKTLAKNSFKASFLSDVKKRSFIETISIY
SIO_010081: SJPD1_RS01635
subclass of: SO_0000673
so part of: SJPD1_RS01635
location: complement(306696..307688)
location: region:306696-307688:-1
so has part: feature:306696-307688:-1:exon

WP_096045680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306696-307688:-1:exon

SJPD1_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01640
old locus tag: SJPD1_0331
so part of: sequence
location: 307822..308574
location: region:307822-308574:1
so has part: feature:307822-308574:1:exon
subclass of: SO_0000010

position:307822:1
position: 307822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308574:1
position: 308574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307822-308574:1:exon

SJPD1_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01640
old locus tag: SJPD1_0331
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014474933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MKIALITGGSRGLGKSMALHLAQKGHDVIITYQHSKTEAQSVVDAIQQLGQKAALLQLDIAQTKTFPLFFEAFKALLASQWNTTHFDILINNAGIGINTSFMETTEEQFDTLMNIHLKGTFFFIQTLLPILNDGGTIINISSGLARFSLPGFAAYAMMKGGIEVLTRYLALELGKRSITVNVLAPGAIATDFGGGVVRDNENANAFIASQTALGRVGLADDIGAAVSLLVSDEAHWINGERIEVSGGMRL
SIO_010081: SJPD1_RS01640
subclass of: SO_0000673
so part of: SJPD1_RS01640
location: 307822..308574
location: region:307822-308574:1
so has part: feature:307822-308574:1:exon

WP_096045681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307822-308574:1:exon

SJPD1_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01645
old locus tag: SJPD1_0332
so part of: sequence
location: 308610..309506
location: region:308610-309506:1
so has part: feature:308610-309506:1:exon
subclass of: SO_0000010

position:308610:1
position: 308610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309506:1
position: 309506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308610-309506:1:exon

SJPD1_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01645
old locus tag: SJPD1_0332
inference: COORDINATES: protein motif:HMM:NF018431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MEEKLNALTILLQEEARKDGLNETSIANVKVFKASSVTEALHTVYEPSLFIIAQGAKRVMLGANKYCYDASSYLVSSMNLPISGQIIEASLEKPFLSMQLCFTPEYIFDLASQMDSVKKGTIQTPLAISVHRVSEELIDAILRLAKLFQKTEDSSILAPLIIKEILYRLLQGEYGGILRQFALHGSNANRIAQSIELITSDISEPLHIGLLSQKIGMSVSAFHKHFKYVTAMSPLQYQKQLRLQKARELLVTKMNEVGEVAFNVGYESPSQFSREYTRFFGLSPQKDLMQFKREIKSV
SIO_010081: SJPD1_RS01645
subclass of: SO_0000673
so part of: SJPD1_RS01645
location: 308610..309506
location: region:308610-309506:1
so has part: feature:308610-309506:1:exon

WP_096045682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308610-309506:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1854492
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00050
inference: COORDINATES: profile:INFERNAL:1.1.4
note: FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: flavin mononucleotide
so part of: sequence
location: 309545..309695
location: region:309545-309695:1
so has part: feature:309545-309695:1:region

position:309545:1
position: 309545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309695:1
position: 309695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309545-309695:1:region

SJPD1_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: ribB
locus tag: SJPD1_RS01650
old locus tag: SJPD1_0333
so part of: sequence
location: 309788..310423
location: region:309788-310423:1
so has part: feature:309788-310423:1:exon
subclass of: SO_0000010

position:309788:1
position: 309788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310423:1
position: 310423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309788-310423:1:exon

SJPD1_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: ribB
locus tag: SJPD1_RS01650
old locus tag: SJPD1_0333
EC number: 4.1.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768510.1
GO function: GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3,4-dihydroxy-2-butanone-4-phosphate synthase
translation: MNQICRDSSLHSSVKQAIASLQNQNGVIVMDNFNRENEADIIFHAGSLTTEQTALLIRECSGIVCLCLPPQKVDELELPMMVSHNESKFQTGFTITIEAKEGVTTGVSAQDRLTTIQAAIHPKGKAKIVSPGHVFPLRAKEGGVLERDGHTEASVDLMRLSGLSPYAVLCELTNVDGTMTVGDDIYDFAAKHGFPIVSIDEIIEYRKKHTL
SIO_010081: SJPD1_RS01650
subclass of: SO_0000673
so part of: SJPD1_RS01650
location: 309788..310423
location: region:309788-310423:1
so has part: feature:309788-310423:1:exon

WP_096045683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309788-310423:1:exon

SJPD1_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01655
old locus tag: SJPD1_0334
so part of: sequence
location: complement(310434..311333)
location: region:310434-311333:-1
so has part: feature:310434-311333:-1:exon
subclass of: SO_0000010

position:310434:-1
position: 310434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311333:-1
position: 311333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310434-311333:-1:exon

SJPD1_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01655
old locus tag: SJPD1_0334
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014468669.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MTFQELRFFYSLCEDSHISNLAQKMGISQSAISLSIKSLEAQIGEQLFDRIGKKLVLNEIGRLFKEKTYSHFRALNDAEDFFKNSKISGILKIASSKTIGDFITPQIVFDFLAHHEEVRIQKDIQNSSQIIQMVKDSTIDIGFIESSCEDADILKDAIGDDQLIVVSSDACLGEGTFYIDELFHKKWILREKGSGTREVFLKALGEIALDLNIFMEFSEFEEAKTILLNNPQTITCLSKVAVTNELNRGELFEVNLVNLKIGRSFYLIYHKNKYQSRLFNEFKQFVHAQMSARHKLTSL
SIO_010081: SJPD1_RS01655
subclass of: SO_0000673
so part of: SJPD1_RS01655
location: complement(310434..311333)
location: region:310434-311333:-1
so has part: feature:310434-311333:-1:exon

WP_096045684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310434-311333:-1:exon

SJPD1_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01660
old locus tag: SJPD1_0335
so part of: sequence
location: 311436..312464
location: region:311436-312464:1
so has part: feature:311436-312464:1:exon
subclass of: SO_0000010

position:311436:1
position: 311436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312464:1
position: 312464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311436-312464:1:exon

SJPD1_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01660
old locus tag: SJPD1_0335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856088.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YeiH family protein
translation: MFQKENRNNTFSGILFVALFSMSATYLADFAILKHLGISPLIVGIVLGMIYANTLRNRLPHEWVPGILFSTKTILRTGIVLYGFRITFQNIEAVGTAGIFTSVVIVASTFIIGYIVGTKVLKLDKETTILTSAGSSICGAAAVLATEPVINAEPYKSAIAVSTVVVFGSIAMFLYPFLYTLGLIPLSPEAMGIYIGGTIHEVAHVVAAGNAVGIEAAKTAVIVKMIRVMLLAPFLVILGFWLVRTTQHVAQKQKSKITIPWFAVFFIIVAGFNSFNFLPQGLVGDINAIDTFLLTMAMTALGMETSVDKFKNVGMKPIYLATILFAWLMVGGFFIVQCSLSL
SIO_010081: SJPD1_RS01660
subclass of: SO_0000673
so part of: SJPD1_RS01660
location: 311436..312464
location: region:311436-312464:1
so has part: feature:311436-312464:1:exon

WP_096045685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311436-312464:1:exon

SJPD1_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01665
old locus tag: SJPD1_0336
so part of: sequence
location: complement(312459..312935)
location: region:312459-312935:-1
so has part: feature:312459-312935:-1:exon
subclass of: SO_0000010

position:312459:-1
position: 312459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312935:-1
position: 312935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312459-312935:-1:exon

SJPD1_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01665
old locus tag: SJPD1_0336
EC number: 1.11.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014473724.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione peroxidase
translation: MSIYDFEVKTINGETISMNMFQNKVLLIVNVASKCGFTNQYEGLENLYEKYKDKGFTILGFPCNQFMNQEPLSEDDIKSFCSITYGVTFPMFAKIDVNGEHTHPLYAYLKEAQKGLLGIEAIKWNFTKFLVDKNGVVVNRFAPATKPESLELDILLYL
SIO_010081: SJPD1_RS01665
subclass of: SO_0000673
so part of: SJPD1_RS01665
location: complement(312459..312935)
location: region:312459-312935:-1
so has part: feature:312459-312935:-1:exon

WP_096045686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312459-312935:-1:exon

SJPD1_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01670
old locus tag: SJPD1_0337
so part of: sequence
location: complement(312993..313844)
location: region:312993-313844:-1
so has part: feature:312993-313844:-1:exon
subclass of: SO_0000010

position:312993:-1
position: 312993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313844:-1
position: 313844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312993-313844:-1:exon

SJPD1_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01670
old locus tag: SJPD1_0337
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768514.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YitT family protein
translation: MKYSMLSTQLLQTIYVLLGTMSMAFGVVCFLSPNGVITGGGIGIALILHFFITQLTLGTLILIVSIPFVVLGYFYFGKLYCLKTLMALFATSFFTDLFREVLHLKPITDDILLASVFGGICIGLGVGLIIKGRSSTGSTSILGEIAAQRSKFKAAEVLLAIDLSIMMAYIFAYGDVKKALYSMFSVYMSTKIIDVILTGRPSKKVVKIVSNNVEALTEQIRERIEEHGTIFTGIGLHHQKQIKTMILVTVEMSKIQLLKDIIREYDPEAFLIISEASEFLGRN
SIO_010081: SJPD1_RS01670
subclass of: SO_0000673
so part of: SJPD1_RS01670
location: complement(312993..313844)
location: region:312993-313844:-1
so has part: feature:312993-313844:-1:exon

WP_226372223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312993-313844:-1:exon

SJPD1_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: sppA
locus tag: SJPD1_RS01675
old locus tag: SJPD1_0338
so part of: sequence
location: complement(313844..314704)
location: region:313844-314704:-1
so has part: feature:313844-314704:-1:exon
subclass of: SO_0000010

position:314704:-1
position: 314704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313844-314704:-1:exon

SJPD1_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: sppA
locus tag: SJPD1_RS01675
old locus tag: SJPD1_0338
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856091.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptide peptidase SppA
translation: MLELIKKPFIWIGAILSYIQNHFKAMLFVLLLVFIYGSQEELKTPNLAVVKIEGEILNVQDILEEIDKADKDEKIKGVLLQVDSPGGALAPSIELSMAVKRLSEHKPVVAYAAGSMTSGSYYASIWSNYIIANPGAFIGSIGVLFQAPNVAELAKKLGISEQIITAGDYKQMGTFTREWTPKERGALKDLIDDAYTLFITDVATARGLNLAKPNEFANAQVFIANKALGIHLIDEVGSIQTAKSKVEELSNVSHPVWEKPDKMDKWMKKLESSSKLPIFNLMGYLK
SIO_010081: SJPD1_RS01675
subclass of: SO_0000673
so part of: SJPD1_RS01675
location: complement(313844..314704)
location: region:313844-314704:-1
so has part: feature:313844-314704:-1:exon

WP_096045687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313844-314704:-1:exon

SJPD1_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01680
old locus tag: SJPD1_0339
so part of: sequence
location: complement(314698..315924)
location: region:314698-315924:-1
so has part: feature:314698-315924:-1:exon
subclass of: SO_0000010

position:314698:-1
position: 314698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315924:-1
position: 315924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314698-315924:-1:exon

SJPD1_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01680
old locus tag: SJPD1_0339
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent hydrolase
translation: MKLLIADFVVPCNASFEIIEKGAVAFDETIIDVGLSEDLKHKYPHAELIETPQNSVILPGLINSHVHLEFSANQSMLRYGDFISWLQSVIKHREELSALATTELITCKLQEMLKSGTTTLGAISSFGADLEACVEAPQRVVYFNEVLGSVPSAVDAMYGDFRGRLEASQEFTCKRFIPAVSVHSPYSTHPILAKKALQIAREEGCVVSTHFMESPAERAWIDTGSGDFQSFFSAFNPHAKPMCEAVEYLELFSHNPTLFTHAVQATKHELDTIAKQQATLTHCPVSNRLLGVGKLDLEAVQKENINLTLGTDGLSSNISLSLWDEMRSALMLHPKLELSSLAQTLLQSVTCNAAKALQLPCGVLEKERYADLIVVTLPQACEKEDMPLQLILHTHQTHLTFIDGEQLC
SIO_010081: SJPD1_RS01680
subclass of: SO_0000673
so part of: SJPD1_RS01680
location: complement(314698..315924)
location: region:314698-315924:-1
so has part: feature:314698-315924:-1:exon

WP_096045688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314698-315924:-1:exon

SJPD1_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: aroQ
locus tag: SJPD1_RS01685
old locus tag: SJPD1_0340
so part of: sequence
location: 316004..316489
location: region:316004-316489:1
so has part: feature:316004-316489:1:exon
subclass of: SO_0000010

position:316004:1
position: 316004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316489:1
position: 316489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316004-316489:1:exon

SJPD1_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: aroQ
locus tag: SJPD1_RS01685
old locus tag: SJPD1_0340
EC number: 4.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856093.1
GO function: GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II 3-dehydroquinate dehydratase
translation: MKIVVIQGPNLNMLSHREQSIYGGMKLEEIHSQMDTVAKQNGFEIEFFQSNLEGEIVDRVQECLGDADGIIINPAAYTHTSIAIRDAISAVALPAIEVHISNIHRREEFRQKSMTAPVCTGQISGFGPFGYHLAMISMMQMLGELDALRKAQAAQQQVTKA
SIO_010081: SJPD1_RS01685
subclass of: SO_0000673
so part of: SJPD1_RS01685
location: 316004..316489
location: region:316004-316489:1
so has part: feature:316004-316489:1:exon

WP_096045689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316004-316489:1:exon

SJPD1_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01690
old locus tag: SJPD1_0341
so part of: sequence
location: 316491..317519
location: region:316491-317519:1
so has part: feature:316491-317519:1:exon
subclass of: SO_0000010

position:316491:1
position: 316491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317519:1
position: 317519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316491-317519:1:exon

SJPD1_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01690
old locus tag: SJPD1_0341
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009649298.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M24 family metallopeptidase
translation: MNYILQDENALYFECGFSCDHAVFLKLGSEAFFITDARYTTEASEVIKNATVLEGDRRDLLKTARLLIRKSGITTLAYNPAEWNVEAYARLSEKLNINFQKKPNFSQQKRIIKSDRELEILKSAALFGKEAFTRFGEFLKHHGEGMDEKRAFFEAEAILKRHGELGLSFEPIIALGANAAKPHALPTCKTLQKGELVLLDAGVKYQRYCSDRTRTSFFGEAFNFEKEQHFNETLKQKVYDTVLLAQEAALKAVKIGVKAKQIDKAARDVIDKAGFGQFFIHSTGHGVGLDIHELPVISARSETIIEENMVFTIEPGIYLPEQFGVRIEDTIIARYDGAEVMG
SIO_010081: SJPD1_RS01690
subclass of: SO_0000673
so part of: SJPD1_RS01690
location: 316491..317519
location: region:316491-317519:1
so has part: feature:316491-317519:1:exon

WP_096045690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316491-317519:1:exon

SJPD1_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: folK
locus tag: SJPD1_RS01695
old locus tag: SJPD1_0342
so part of: sequence
location: 317516..317983
location: region:317516-317983:1
so has part: feature:317516-317983:1:exon
subclass of: SO_0000010

position:317516:1
position: 317516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317983:1
position: 317983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317516-317983:1:exon

SJPD1_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: folK
locus tag: SJPD1_RS01695
old locus tag: SJPD1_0342
EC number: 2.7.6.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768519.1
GO function: GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
translation: MKLERIRFFPTCKKARPSFLHRAVVGLGGNQGDVKKRFVKLYRLFVNDPRFFIQESSMVLQNPPFGYLDQPDFYNAVIVLQTSLSAKALLKVLLRLEHLFGRVRLFKNGPRTLDLDIIFFDNQKIQQPNLIVPHPRWQERASVIVPLFTLKSFKG
SIO_010081: SJPD1_RS01695
subclass of: SO_0000673
so part of: SJPD1_RS01695
location: 317516..317983
location: region:317516-317983:1
so has part: feature:317516-317983:1:exon

WP_096045691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317516-317983:1:exon

SJPD1_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: flhF
locus tag: SJPD1_RS01700
old locus tag: SJPD1_0343
so part of: sequence
location: 317980..319266
location: region:317980-319266:1
so has part: feature:317980-319266:1:exon
subclass of: SO_0000010

position:317980:1
position: 317980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319266:1
position: 319266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317980-319266:1:exon

SJPD1_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: flhF
locus tag: SJPD1_RS01700
old locus tag: SJPD1_0343
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768520.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0044781 - bacterial-type flagellum organization [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FlhF
translation: MEVKFHTFSGETPAEALKQAQQDCGENALVISTKQIRKKTISTSALYEVVVAIEDDQPTAVPKKPEPKVEHKYKSGEDVLFSLSEAAKQISQIAQATGDMGGTNASREAERAQNSEGIGEIKCEINKLADKIKLIQEMFWEERAPHRNHLAIPSEFSEIYKLAKTSGMGEDHLENIMNLTLEHMPVRMKNSSETIKRYFQVLLRKLIPVRMEAELPKGNKRVMMFVGPTGVGKTTTIAKLAARYSYIQEKRAKVGIITLDTYRIGAVEQLFQYAKMMRLPIEDVVDPSDFNNALSSLSHCDVILIDTVGSSQYDKDKLVKLNKFLQSSQLQIDVNLVLSAGSKLEDLKEIYKNFSFLDIDTLIFTKFDETKVFGTIFSLIYDIDKPVSYFSIGQEVPDDIVPASSDFLVECILDGFEKKRGEYGNAGE
SIO_010081: SJPD1_RS01700
subclass of: SO_0000673
so part of: SJPD1_RS01700
location: 317980..319266
location: region:317980-319266:1
so has part: feature:317980-319266:1:exon

WP_096045692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317980-319266:1:exon

SJPD1_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01705
old locus tag: SJPD1_0344
so part of: sequence
location: 319247..320119
location: region:319247-320119:1
so has part: feature:319247-320119:1:exon
subclass of: SO_0000010

position:319247:1
position: 319247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320119:1
position: 320119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319247-320119:1:exon

SJPD1_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01705
old locus tag: SJPD1_0344
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006656958.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MinD/ParA family protein
translation: METQANKLQELVGAASANEHSHTKFIAITSGKGGVGKSTVSANMANILANNGYKVGLFDADIGLANLDVILNVRIDKNILHVLKGECTLADVIVPIKKNLLLIPGESGDEILKYSEQFLFERFLEETKVLDDLDFMIIDTGAGIGGHIQLFLEAADEVIVVTVPDPAAITDAYATIKITSKTQSNIHVILNMTKSEKEAQLIFDKINKVAMANIGNGLKLNLIGKLPEDKLISKSIKQRTLFTNDAPNSLAALDMKRIVNNLVYKLERKVLKTDTNKSFGSFFKRIIEQF
SIO_010081: SJPD1_RS01705
subclass of: SO_0000673
so part of: SJPD1_RS01705
location: 319247..320119
location: region:319247-320119:1
so has part: feature:319247-320119:1:exon

WP_087437610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319247-320119:1:exon

SJPD1_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01710
old locus tag: SJPD1_0345
so part of: sequence
location: 320142..320510
location: region:320142-320510:1
so has part: feature:320142-320510:1:exon
subclass of: SO_0000010

position:320142:1
position: 320142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320510:1
position: 320510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320142-320510:1:exon

SJPD1_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01710
old locus tag: SJPD1_0345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856098.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKSENFIYFFTICGFFIGLMFSVLNFTEPEEILFYTLEITLVFYLIIHVAVMNFFDFDRLSTFIFDKKDHESIGDYFIQELENREKVMDSLLASIDNMNQHYDKIMKGSMESNESYSKKAA
SIO_010081: SJPD1_RS01710
subclass of: SO_0000673
so part of: SJPD1_RS01710
location: 320142..320510
location: region:320142-320510:1
so has part: feature:320142-320510:1:exon

WP_096045693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320142-320510:1:exon

SJPD1_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01715
old locus tag: SJPD1_0346
so part of: sequence
location: 320482..321195
location: region:320482-321195:1
so has part: feature:320482-321195:1:exon
subclass of: SO_0000010

position:320482:1
position: 320482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321195:1
position: 321195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320482-321195:1:exon

SJPD1_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01715
old locus tag: SJPD1_0346
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856099.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor FliA
translation: MNPTVKKQPNPYSQNLKKEQDELVLQYLPAVRAMAYRLRERLPASVDVNDLISIGTEEMIKLSRRYDKDQNDSFWGYGKKRVYGSMLDFLRSLDTMSRANRRLIKMVDNEITAYLSEHGNEPDDAYLAKALNEDIEKIAEARNSSMIVSVMSLNEQITILSGEDTAQKVEKDELMEMIQSILLTFGEREQMIIQLYYFEELNLKEISEVLDISESRISQIHKKLLAKIKEQLGINHG
SIO_010081: SJPD1_RS01715
subclass of: SO_0000673
so part of: SJPD1_RS01715
location: 320482..321195
location: region:320482-321195:1
so has part: feature:320482-321195:1:exon

WP_096045694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320482-321195:1:exon

SJPD1_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: fliM
locus tag: SJPD1_RS01720
old locus tag: SJPD1_0347
so part of: sequence
location: 321188..322249
location: region:321188-322249:1
so has part: feature:321188-322249:1:exon
subclass of: SO_0000010

position:321188:1
position: 321188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322249:1
position: 322249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321188-322249:1:exon

SJPD1_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: fliM
locus tag: SJPD1_RS01720
old locus tag: SJPD1_0347
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856100.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliM
translation: MADILSQEEIDALLEVVEEDGDTLSTENESSDTRQVILYDFKRPNRVSKKQLRAVKGIHDKMARNLASQISSIMRSIVEIQLHSVDQMTYGEFLMSLPSPTSFNVFSIKPLDGNCIIEINPSIAFPMIDRLLGGLGESYESTRELTDIELNLLDAILRIIMQRLKEGWAPITDMYPTVETKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMINLCYPVIYLEPILSRLANRDIMLGETSAKKSRNKELNTLISRAEVFNEAIIGQAELSVGELLELKKGDIVRLDRPADDKAIVMIDKKELFLAEIGLHRFRKSIKIESLVKTDKDEVKSALEELEHIRKSKISSFDTTQQG
SIO_010081: SJPD1_RS01720
subclass of: SO_0000673
so part of: SJPD1_RS01720
location: 321188..322249
location: region:321188-322249:1
so has part: feature:321188-322249:1:exon

WP_096045695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321188-322249:1:exon

SJPD1_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: fliY
locus tag: SJPD1_RS01725
old locus tag: SJPD1_0348
so part of: sequence
location: 322253..323116
location: region:322253-323116:1
so has part: feature:322253-323116:1:exon
subclass of: SO_0000010

position:322253:1
position: 322253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323116:1
position: 323116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322253-323116:1:exon

SJPD1_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: fliY
locus tag: SJPD1_RS01725
old locus tag: SJPD1_0348
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856101.1
GO component: GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliY
translation: MNTFVQLLQQEVVSTIEGLTGIAPTVELNAEESGESKLTLSPPLAKLDITVGGELHGKMRVTMATSIATAIGDMMLGGEGNEKEDMDAEDLDATKEIISNILSSFSRSLGSQKNMPKLEFEIENVEYIDPNSTIDFKGFEKLFIYNLAVHNSHDTIAFAITHELTPLIGEEVSAPSASSAAAQEFIFEEPKKVVTNMSPEELSNIELIKDVRLPIRVRIGSKKMLLKDVLSMDIGSVIELDQLANDPLEILVGDKVIAMGEVVIVDGNFGVQIGEIGTKRERLEKLR
SIO_010081: SJPD1_RS01725
subclass of: SO_0000673
so part of: SJPD1_RS01725
location: 322253..323116
location: region:322253-323116:1
so has part: feature:322253-323116:1:exon

WP_096045696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322253-323116:1:exon

SJPD1_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01730
old locus tag: SJPD1_0349
so part of: sequence
location: 323125..323859
location: region:323125-323859:1
so has part: feature:323125-323859:1:exon
subclass of: SO_0000010

position:323125:1
position: 323125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323859:1
position: 323859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323125-323859:1:exon

SJPD1_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01730
old locus tag: SJPD1_0349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768526.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR00730 family Rossman fold protein
translation: MQQQKHIKDTERSNEWSVLRIMSDFVKGFDELQDLGPSVTFFGSARFHANNRYYQDAHTLAYKLGKKGYSIITGGSKGIMEAANKGGFDSEKCQSIGLNINLPHEQSGNQYTTKHLNFDYFFVRKVMLVKYSLAYVIFPGGFGTLDEFFEALTLTQTGKITKISIFLYGKDYWEKLLDFIKTTMVEHHTIRPEDVELIILTDDLDEIVTKIDERLVLYINELKNEGLEHSHYYQKAVEFLSNQE
SIO_010081: SJPD1_RS01730
subclass of: SO_0000673
so part of: SJPD1_RS01730
location: 323125..323859
location: region:323125-323859:1
so has part: feature:323125-323859:1:exon

WP_096045697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323125-323859:1:exon

SJPD1_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01735
old locus tag: SJPD1_0350
so part of: sequence
location: 323931..325547
location: region:323931-325547:1
so has part: feature:323931-325547:1:exon
subclass of: SO_0000010

position:323931:1
position: 323931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325547:1
position: 325547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323931-325547:1:exon

SJPD1_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01735
old locus tag: SJPD1_0350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768527.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFVLYEISFYIFKTYRSFFNSDAAIANILAEEMVLAGSFFPSHWWYVNNDLWVFYKQLLVIPWVLAGKNGYFAHAFTVFEVSVFMIVFIYLFLRSLMLSRASAIMGGVVVCIAYSPMYLRELFGEAAYTWYFLFMIGFMFIFRKLSPHVISKSTQIKAFIFFMMLLYLLVLANPIRFFVYYVVPFFGALALSIYFARDSIKTFQHAVYRLLSVKKMVIFAFACLVMGLAGMAHYNLLESLHLAGGANNAGLVSLEILPVHAAHAFLGLLNFIGAEWNEGVRASSIEGAISLLKFALYPCVLIIPALHVKKAFYQMSATERFFVLFSYVGFAIIYILYSTTALHESAWAARNNIRYISPFIMMILVCNVIMWRFFSLFSKVILSVCLAMALGLSWNYVSPKEWRGIVDERIALVEELKSRGLHFGYAEYWDSHLYTVFSDGDVDIRPIEVDEKGISLVKWLSSDRWYQKDSTDGKVFFMLKHEDIADFNVSLKNLNMPDPIDQFAMNQYTIYVFEKNPLYVKKSKAEARKKKRIMTAP
SIO_010081: SJPD1_RS01735
subclass of: SO_0000673
so part of: SJPD1_RS01735
location: 323931..325547
location: region:323931-325547:1
so has part: feature:323931-325547:1:exon

WP_226372224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323931-325547:1:exon

SJPD1_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01740
old locus tag: SJPD1_0351
so part of: sequence
location: 325568..326497
location: region:325568-326497:1
so has part: feature:325568-326497:1:exon
subclass of: SO_0000010

position:325568:1
position: 325568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326497:1
position: 326497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325568-326497:1:exon

SJPD1_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01740
old locus tag: SJPD1_0351
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856104.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MESVKISVVSPIYGCKECLFELYDRLVKTLSQITDNFEIILVNDACPQASWERIVMLCAKDARVKGINLSRNFGQHYAITAGLDHAKGDWVVVMDCDLQDRPEEIIKLYNKALDGYDIVFGKRVERQDTFLKRLGSQVFNRVLEYFTETKHDNSIANFGIYAQKVVETINRYREQSRDFLLFAQMVGFKKAEIEIEHAARAYGSSSYNLSKLIRLAIDSIVSHSNKPLRLSIQLGFFIALISLIYACWLVIRYFFYHTPAEGWTSLMVSMFFMFGLLFAIIGIAGLYIGKIFDEVKRRPLYIIQETINL
SIO_010081: SJPD1_RS01740
subclass of: SO_0000673
so part of: SJPD1_RS01740
location: 325568..326497
location: region:325568-326497:1
so has part: feature:325568-326497:1:exon

WP_096045699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325568-326497:1:exon

SJPD1_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01745
old locus tag: SJPD1_0352
so part of: sequence
location: 326494..327186
location: region:326494-327186:1
so has part: feature:326494-327186:1:exon
subclass of: SO_0000010

position:326494:1
position: 326494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327186:1
position: 327186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326494-327186:1:exon

SJPD1_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01745
old locus tag: SJPD1_0352
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856105.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WbqC family protein
translation: MKKIAILQSNYIPWKGYFDIIGSVDEFVLYDDMQYTKNDWRNRNKIKTQNGLQWLSIPVRQESLHQKINETKIIDPKWNVNHWRSISQSYAKAPHFKAYKEQMEALYMSATMETISEINRHFIDAICAMIEIKTVIRDSREFVLADGKSERLLALCQDLGATTYLSGPAARDYLDESIFKEAGIAVEWMDYSGYEEYHQLFPPFEHGVSVIDLILNEGENAKNFLKSTPK
SIO_010081: SJPD1_RS01745
subclass of: SO_0000673
so part of: SJPD1_RS01745
location: 326494..327186
location: region:326494-327186:1
so has part: feature:326494-327186:1:exon

WP_096045700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326494-327186:1:exon

SJPD1_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
alternative label: fcnA
alternative label: wecE
gene: rffA
locus tag: SJPD1_RS01750
old locus tag: SJPD1_0353
gene synonym: fcnA; wecE
so part of: sequence
location: 327183..328316
location: region:327183-328316:1
so has part: feature:327183-328316:1:exon
subclass of: SO_0000010

position:327183:1
position: 327183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328316:1
position: 328316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327183-328316:1:exon

SJPD1_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
alternative label: fcnA
alternative label: wecE
gene: rffA
locus tag: SJPD1_RS01750
old locus tag: SJPD1_0353
gene synonym: fcnA; wecE
EC number: 2.6.1.59
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768530.1
GO function: GO:0019180 - dTDP-4-amino-4,6-dideoxygalactose transaminase activity [Evidence IEA]
GO process: GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-amino-4,6-dideoxygalactose transaminase
translation: MIHFNKPPLTGNEEKYLLETLHSLKMSGDGVFGKRCQKWFEERYHCSKTLLTPSCTHALEMAALLLEIKEGDEVIMPSYTFVSTADAFALRGAKIVFIDVRPETMNIDERLIEAAITPKTKVIVPVHYAGVGCNMDIIMDIARRHNLFVVEDAAQGFESTYKGKPLGTIGHLGAFSFHETKNVTSGGEGGLLLINDERFLQRAEIIREKGTNRSQFFRGMVDKYSWVDIGSSYLPCEFQSAYLWGQLEMVDTIQTHRLNSWKAYYERLEPLAKKGLIELPFIPDGCSHNAHMFYLKVKDLDERTALLEKFKELNIGAVFHYIPLHSAPAGLKFGHFFGKDIYTTKESERLIRLPMYYGLTLEEIDSVCEVLIKWSAR
SIO_010081: SJPD1_RS01750
subclass of: SO_0000673
so part of: SJPD1_RS01750
location: 327183..328316
location: region:327183-328316:1
so has part: feature:327183-328316:1:exon

WP_096045701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327183-328316:1:exon

SJPD1_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01755
old locus tag: SJPD1_0354
so part of: sequence
location: 328316..328678
location: region:328316-328678:1
so has part: feature:328316-328678:1:exon
subclass of: SO_0000010

position:328678:1
position: 328678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328316-328678:1:exon

SJPD1_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01755
old locus tag: SJPD1_0354
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768531.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MAHLYIFGTIFFTVYGQLVIKWRIPFHGHLPDASAEKLFFLLKLFLDPFILSGFVSAFIASLCWMAAMTKFELSYAYPFMGLTFVVVFVSSVFLFSESVTLYKILGLALIVLGIFISSRA
SIO_010081: SJPD1_RS01755
subclass of: SO_0000673
so part of: SJPD1_RS01755
location: 328316..328678
location: region:328316-328678:1
so has part: feature:328316-328678:1:exon

WP_096045702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328316-328678:1:exon

SJPD1_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01760
old locus tag: SJPD1_0355
so part of: sequence
location: complement(328750..329052)
location: region:328750-329052:-1
so has part: feature:328750-329052:-1:exon
subclass of: SO_0000010

position:328750:-1
position: 328750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329052:-1
position: 329052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328750-329052:-1:exon

SJPD1_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01760
old locus tag: SJPD1_0355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856108.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EF-hand domain-containing protein
translation: MKKALMLLTMVSFVGLNLFAADTTRGPLAFEAYDKNKDGVITKEEFDAVKAERMSARAEAGMPMRNAANSPDFAYFDTNKDGKITKEELQDGQLRRMRSR
SIO_010081: SJPD1_RS01760
subclass of: SO_0000673
so part of: SJPD1_RS01760
location: complement(328750..329052)
location: region:328750-329052:-1
so has part: feature:328750-329052:-1:exon

WP_096045703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328750-329052:-1:exon

SJPD1_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01765
old locus tag: SJPD1_0356
so part of: sequence
location: complement(329049..329873)
location: region:329049-329873:-1
so has part: feature:329049-329873:-1:exon
subclass of: SO_0000010

position:329049:-1
position: 329049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329873:-1
position: 329873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329049-329873:-1:exon

SJPD1_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01765
old locus tag: SJPD1_0356
inference: COORDINATES: protein motif:HMM:NF025716.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4405 domain-containing protein
translation: MYSLRRFISLCIGFSFLVMSYTGIILFLSPKGRVANWTNWEILGLDKTHYTHLHVTFMVLFLVGMLFHIYLNWNALINYLMNKSREFSLFTKEFLLALGLNLLFLFGTLYYWVPFEQFLDFQDEIKASWEKKADQAPYGHAELSSLEEFSQRTNSNVITIMSQLNAHQIQGATLTKSIAQIAKENGKSPAQIFDIINTKPQPQSSSSGGGYGKLTLKEASIQQAFELEKALQIIHEKGFNATENSTLKECAEALHVKPIELLELLKTIQTKESK
SIO_010081: SJPD1_RS01765
subclass of: SO_0000673
so part of: SJPD1_RS01765
location: complement(329049..329873)
location: region:329049-329873:-1
so has part: feature:329049-329873:-1:exon

WP_096045704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329049-329873:-1:exon

SJPD1_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01770
old locus tag: SJPD1_0357
so part of: sequence
location: 330009..330938
location: region:330009-330938:1
so has part: feature:330009-330938:1:exon
subclass of: SO_0000010

position:330009:1
position: 330009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330938:1
position: 330938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330009-330938:1:exon

SJPD1_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01770
old locus tag: SJPD1_0357
EC number: 2.7.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:YP_002344316.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose-phosphate pyrophosphokinase
translation: MRGYKVFAGTANPEFAKRVAKHLSLPLSAAEIKRFSDGEISVQVSESVRGKDVFIIQSTCAPANINLMELLILTDALRRSSANSITAVMPYFGYARQDRKAAPRVPITAKLVANMIQTAGIDRVVTIDLHAGQIQGFFDIPVDNLYGSIIFNDYVKAKNLKNPIIASPDIGGVARARSFAKLLGVDMVIVDKRREKANVSEVMNIIGDVAGKDVILVDDMIDTAGTIVKAAEVLKKKGATSVMACCTHAVLSGPAYERISKGDLDELIVTDTIPLKEANDKIKVLSVAPVFAEVIRRVYHNESVNGLFV
SIO_010081: SJPD1_RS01770
subclass of: SO_0000673
so part of: SJPD1_RS01770
location: 330009..330938
location: region:330009-330938:1
so has part: feature:330009-330938:1:exon

WP_087437622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330009-330938:1:exon

SJPD1_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: lepA
locus tag: SJPD1_RS01775
old locus tag: SJPD1_0358
so part of: sequence
location: 330938..332731
location: region:330938-332731:1
so has part: feature:330938-332731:1:exon
subclass of: SO_0000010

position:332731:1
position: 332731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330938-332731:1:exon

SJPD1_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: lepA
locus tag: SJPD1_RS01775
old locus tag: SJPD1_0358
EC number: 3.6.5.n1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768535.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor 4
translation: MQKHIRNFCIIAHIDHGKSTLADRLIQECGAVSAREMTAQMMDTMDIEKERGITIKAQSVRLTYVKDGQPYILNLIDTPGHVDFSYEVSRSLASSDGALLVVDASQGVEAQTIANVYIALENNLEIIPVLNKIDLPAADPERVKDEIEHTIGLDCSEALSVSAKSGIGIRELLDTLVDKIPAPTGDENAPTKALIYDSWFDNYLGALALVRVYDGAIKKGQEVYVMGTGKKHEVLNLMYPHPLVLEKTPMIKTGEVGIVVLGLKNVGDVKVGDTITDFRNKTKEPIAGFKEVKQFVFAGLYPIETDKFEELRDALDKLKLNDSSISYEPETSAALGFGFRVGFLGLLHMEVIKERLEREFDLDLIATAPTVTYKVKTTKGTVLDIQNPSQLPPVNEFEEIQEPYVKATVLTPTEFLGNIIILMNNKRGMQKKMDYLSPERVLLEYEIPLNEIVMDFYDKLKSVSKGYASFDYEPIGYQVGDLVKLDLLVAGEPVDALSIIVPRVSAQTRGRDFVKAMKEIVPRQLFEVAIQASIGTKVIARETVKSMGKNVTAKCYGGDITRKRKLLDKQKEGKKRMKSIGKVQLPQEAFLTILKID
SIO_010081: SJPD1_RS01775
subclass of: SO_0000673
so part of: SJPD1_RS01775
location: 330938..332731
location: region:330938-332731:1
so has part: feature:330938-332731:1:exon

WP_096045705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330938-332731:1:exon

SJPD1_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01780
old locus tag: SJPD1_0359
so part of: sequence
location: 332745..333317
location: region:332745-333317:1
so has part: feature:332745-333317:1:exon
subclass of: SO_0000010

position:332745:1
position: 332745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333317:1
position: 333317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332745-333317:1:exon

SJPD1_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01780
old locus tag: SJPD1_0359
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768536.1
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase family protein
translation: MRCHLCLNLSWQPLCKTCLQTILAPTPAFRVLESGLKVYSFYNYNDIAPLLHTKHTYIGAKIFAQLGHHTFFEFLKTFELPKGICAIPIDDHVRHGYSHSAILAKATKPFLTPLYGSLRAQNHESYSGKSRAFRQANKRNFIVTCKDEMDVILIDDIVTTGSTLEEAHETLKQHGVNVLFALVLADAKEN
SIO_010081: SJPD1_RS01780
subclass of: SO_0000673
so part of: SJPD1_RS01780
location: 332745..333317
location: region:332745-333317:1
so has part: feature:332745-333317:1:exon

WP_096045706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332745-333317:1:exon

SJPD1_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01785
old locus tag: SJPD1_0360
so part of: sequence
location: complement(333352..334665)
location: region:333352-334665:-1
so has part: feature:333352-334665:-1:exon
subclass of: SO_0000010

position:333352:-1
position: 333352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334665:-1
position: 334665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333352-334665:-1:exon

SJPD1_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01785
old locus tag: SJPD1_0360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856114.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MAQQHTAMKHKRMLCAQDYKTLSLSAFGGALEFYDFIIFVFFSKVIGSLFFPADMPMWLSQLQTFGIFAAGYLARPFGGIVMAHFGDLLGRKRMFTLSILLMAIPTLLIGCLPTYAVVGYFSPVFLLLLRVCQGLAVGGEIPGAWTFVAEHVPKDKVGLACGTLTSGLTLGILLGSIVSILMQSNFNASEMHAWAWRIPFIVGGIFGFIAMYLRQWLKETPIFLEMQQRGEKEISKKLPIWDVLSNYLPQVTLSILLTWVLSAGIMVIIVTSHVYLQGQFGFSEMDVSISRLLATAGLALGCVFYGYLTDKFSIGQVIMIGCLFVVIATIVFLSSLSAGREMLYITYPIVGFSIGIVGAFPYYMVRAFPAKVRYSGVAFSFNISYAITGALTAFLIPILANFFSKYAAGFYVIAVFLLGAILGWYIIRKEKELAKDI
SIO_010081: SJPD1_RS01785
subclass of: SO_0000673
so part of: SJPD1_RS01785
location: complement(333352..334665)
location: region:333352-334665:-1
so has part: feature:333352-334665:-1:exon

WP_226372225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333352-334665:-1:exon

SJPD1_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01790
old locus tag: SJPD1_0361
so part of: sequence
location: complement(334807..335325)
location: region:334807-335325:-1
so has part: feature:334807-335325:-1:exon
subclass of: SO_0000010

position:334807:-1
position: 334807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335325:-1
position: 335325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334807-335325:-1:exon

SJPD1_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01790
old locus tag: SJPD1_0361
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTRFNETVLKVIIIIAIIVMFITLYTTGIAFVLGSYTFSNLLLHKLAALIIIGLLGVHAWLRRCTIRKLLQESIAIILNKHIRNEDNIDFLIQNTKHQSFHALCVLFHFDADFIKEKLLENHITVEKDEDTLKTIAKRNDKDMYQILLLMMKLHVEKNSPSPILINSCDRV
SIO_010081: SJPD1_RS01790
subclass of: SO_0000673
so part of: SJPD1_RS01790
location: complement(334807..335325)
location: region:334807-335325:-1
so has part: feature:334807-335325:-1:exon

WP_096045707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334807-335325:-1:exon

SJPD1_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01795
old locus tag: SJPD1_0362
so part of: sequence
location: 335410..336168
location: region:335410-336168:1
so has part: feature:335410-336168:1:exon
subclass of: SO_0000010

position:335410:1
position: 335410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336168:1
position: 336168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335410-336168:1:exon

SJPD1_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01795
old locus tag: SJPD1_0362
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768540.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSRRLRIESLGYHHVYNRGVAKSAVFIDEIDKAKFIELMASMAREYKFNIHAFCLMDNHYHILVQNTRENLSSGMRQLGAQYASYFNKRHCRVGHLWQDRFKSWYVLDDKYLFTLFKYIESNPLKAKMTNIIGEYMYCATYSMLKDAVPPFLQNSFVLRDYNTQELFDLLSIPLSALERLTIDAFHKTKYKHEDGQIALLHKEELSNYFLHVKNKEQRNEAIKNAYEDGYSKTDIAKKLSLSVAGVSKILKS
SIO_010081: SJPD1_RS01795
subclass of: SO_0000673
so part of: SJPD1_RS01795
location: 335410..336168
location: region:335410-336168:1
so has part: feature:335410-336168:1:exon

WP_096045708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335410-336168:1:exon

SJPD1_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: gyrA
locus tag: SJPD1_RS01800
old locus tag: SJPD1_0363
so part of: sequence
location: 336247..338775
location: region:336247-338775:1
so has part: feature:336247-338775:1:exon
subclass of: SO_0000010

position:336247:1
position: 336247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338775:1
position: 338775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336247-338775:1:exon

SJPD1_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: gyrA
locus tag: SJPD1_RS01800
old locus tag: SJPD1_0363
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856126.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit A
translation: MDNIFDSNQDIKTVSIEESIKTSYLDYSMSVIIGRALPDARDGLKPVHRRILYAMNDLAISSRSPYKKSARIVGDVIGKYHPHGDTAVYDALVRMAQPFSMRIPIVDGQGNFGSIDGDSAAAMRYTEARMTPLAEELLRDLDKDTVDFVPNYDDSMIEPDVLPSRVPNLLLNGSSGIAVGMATNIPPHCLDELLDALLLLIENPEATLDEVMEFIKGPDFPTSGIIFGKKGILEAYKTGRGRVRIRSKVHIEKKGNKDIIVIDELPYQVNKVRLIEQIVALVKDKMIEGISEIRDESDRDGIRLVIELKREAMSDIVLNNLYKSTNLEVTFGVILLAIHNKEPKVFTLIELLLLFLRHRKTVIIRRTIFELEKAKAKAHILEGLTIALDNIDEIIALIKGSADTKSAKDGLIERFNLSEVQAGAILDMRLQRLTGLEREKIENELAELLKEIQYLTDILKSEVVLNDLIKKELIEIKDKFKSKRITEIVDDYDDIDVEDLIANESMVVTITHRGYIKRVPLKQYEKQKRGGKGKIAVTTYDDDFIESFFVSDTHDTLMFVTDRGQLYWLKVYRIPEGSRTAKGKAVVNLIQLQADEKIMAIIPTTDFDETKSLAFFTKNGVIKRTNLSEFKNIRSVGVRAITLDDDDELVTAKVVTQETKNLFIVTKKGMCIRFEVSDAREIGRTARGVTGIRFKEENDRVVGAAVIYNDQEELLTVTEKGIGKRTTAEEYRLQGRGGKGVIAMKLTPKTADLVGVVIVDEDKDLMALTSNGKMIRVDMETIRKAGRNTSGVKVVSVEGTDIVASIARCPKEEIDELEGEFEEGDEGSNEGSLISDITPSEE
SIO_010081: SJPD1_RS01800
subclass of: SO_0000673
so part of: SJPD1_RS01800
location: 336247..338775
location: region:336247-338775:1
so has part: feature:336247-338775:1:exon

WP_096045709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336247-338775:1:exon

SJPD1_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01805
old locus tag: SJPD1_0364
so part of: sequence
location: 338824..339264
location: region:338824-339264:1
so has part: feature:338824-339264:1:exon
subclass of: SO_0000010

position:338824:1
position: 338824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339264:1
position: 339264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338824-339264:1:exon

SJPD1_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01805
old locus tag: SJPD1_0364
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856125.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRWFVTLLASLGLILLVAGCSAKKDEPPKNPKDAMYDFSNEKSIVVYGEGIAPQNTVSPAQAIALAKRAAITDGYRQLGEKLYGVKINSTETVRDAMLKDSRITAQVNALIKDAAITDATFKDGLYSIRMEVTMSARRWQELFAY
SIO_010081: SJPD1_RS01805
subclass of: SO_0000673
so part of: SJPD1_RS01805
location: 338824..339264
location: region:338824-339264:1
so has part: feature:338824-339264:1:exon

WP_087437627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338824-339264:1:exon

SJPD1_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01810
old locus tag: SJPD1_0365
so part of: sequence
location: 339240..339629
location: region:339240-339629:1
so has part: feature:339240-339629:1:exon
subclass of: SO_0000010

position:339240:1
position: 339240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339629:1
position: 339629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339240-339629:1:exon

SJPD1_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01810
old locus tag: SJPD1_0365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768543.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARTFCLLIGLTQALFCSDLFWFSYKIVTVNGLVVYEQKNIAPVMIPYEGKVQKLCSIVLSNTQNLPKEQFLRKHFDDILPCFYQLSSHLLAWDDQYLKHGNDRIELVIEPVRFTVDFKDEFATINAIR
SIO_010081: SJPD1_RS01810
subclass of: SO_0000673
so part of: SJPD1_RS01810
location: 339240..339629
location: region:339240-339629:1
so has part: feature:339240-339629:1:exon

WP_096045710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339240-339629:1:exon

SJPD1_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01815
old locus tag: SJPD1_0366
so part of: sequence
location: 339657..340820
location: region:339657-340820:1
so has part: feature:339657-340820:1:exon
subclass of: SO_0000010

position:339657:1
position: 339657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340820:1
position: 340820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339657-340820:1:exon

SJPD1_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01815
old locus tag: SJPD1_0366
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54 dependent transcriptional regulator
translation: MHVAIVEDDINMRKSLEIALGEYEEFKISTYKSALDALKKIDSSVDLIVTDINMPGMDGIEFIKKLDGAYDIIVITGNATLSRAIESVRLGVKDFLTKPFEIETLVEAIKRHDKIRTKVKESFEKIDSAKEENGDFIATSPELEKALTIARKAAKTDVSVLLLGESGVGKELFANYVHKNSPRAKNPFVAINMAAIPENLLESELFGYEKGAFTDAIAEKKGYFEVANGGTLFLDEIGEMPMTLQAKLLRVIQERVMVRVGGTKELTIDVRIVSATNADIKRSIKEGHFREDLYYRLNTIPIEIAPLRQRKEEILPICEVILERVTKKYGLQKRYFSEEAIESLMTYRWPGNIRELISVVERAVILSDTEAISKEDLFLESRNWFSS
SIO_010081: SJPD1_RS01815
subclass of: SO_0000673
so part of: SJPD1_RS01815
location: 339657..340820
location: region:339657-340820:1
so has part: feature:339657-340820:1:exon

WP_096045711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339657-340820:1:exon

SJPD1_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01820
old locus tag: SJPD1_0367
so part of: sequence
location: 340909..341937
location: region:340909-341937:1
so has part: feature:340909-341937:1:exon
subclass of: SO_0000010

position:340909:1
position: 340909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341937:1
position: 341937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340909-341937:1:exon

SJPD1_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01820
old locus tag: SJPD1_0367
EC number: 1.2.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768545.1
GO function: GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO process: GO:0008652 - amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate-semialdehyde dehydrogenase
translation: MKKYNVAIVGATGAVGEELCRVLEEVDFPVNNLIPLASSKSAGLEVEFKGKIYKVLELTEKAFEENDVEIAFFSAGGDISAHYAPFAAEAGAVVIDNTSHFRMDPDVPLVVPECNPDDIDQWQNRGIIANPNCSTIQMVQVLKPLDDIFNITRVDVATYQAVSGAGKSGMEELVNQMQDFFAFKLDQCEPKTFSHQIALNVIPHIDVFMDNDYTKEEMKMVNETQKILGKKMEISATCVRVPVMRSHSEAITIHFEKDVNLEKAVEALKNAENVVVLDNPAKKEYPMPIISTDTNDTYVGRIRKDINRDNILHLWCVADQIRVGAATNAVRIAQKWIKREEA
SIO_010081: SJPD1_RS01820
subclass of: SO_0000673
so part of: SJPD1_RS01820
location: 340909..341937
location: region:340909-341937:1
so has part: feature:340909-341937:1:exon

WP_096045712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340909-341937:1:exon

SJPD1_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01825
old locus tag: SJPD1_0368
so part of: sequence
location: 341937..342452
location: region:341937-342452:1
so has part: feature:341937-342452:1:exon
subclass of: SO_0000010

position:342452:1
position: 342452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341937-342452:1:exon

SJPD1_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01825
old locus tag: SJPD1_0368
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856121.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqhA family protein
translation: MLEKLFERGLWSTRLMTLLAVIFSILAAFALFFLASADLYHVLVLTYQYFFTNFHPENFHADIVADIIGAIDLYLIAVVLLIFGFGIYELFISEIDVAKGTGGDKILYVSSLDELKDKIAKVIVMVLIVSFFQRVLHAEYKGALEMLYLSFSILALSLGLYFLHKNGGNHE
SIO_010081: SJPD1_RS01825
subclass of: SO_0000673
so part of: SJPD1_RS01825
location: 341937..342452
location: region:341937-342452:1
so has part: feature:341937-342452:1:exon

WP_096045713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341937-342452:1:exon

SJPD1_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: hemE
locus tag: SJPD1_RS01830
old locus tag: SJPD1_0369
so part of: sequence
location: 342449..343471
location: region:342449-343471:1
so has part: feature:342449-343471:1:exon
subclass of: SO_0000010

position:342449:1
position: 342449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343471:1
position: 343471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342449-343471:1:exon

SJPD1_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: hemE
locus tag: SJPD1_RS01830
old locus tag: SJPD1_0369
EC number: 4.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768547.1
GO function: GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen decarboxylase
translation: MIFVDACFGKKTPYTPVWMMRQAGRYLPEYMEVRAKAGDFLSLCKDPEKACAVTLQPVDILGVDAAILFSDILVVPLEMGMELQFLKGEGPVFSHPIKNQADLDKLSVEKAIDGLEYVYETIKLIRGKLAADKALIGFCGAPWTLATYMIEGQGTKTYALVKKLIYSNPQFMHALLKKVTEVLKGYMERQIQSGANVVMIFDSWAAALEESAYFEFSWSYMKEISAYLKLKYPHVPVILFPKGISGYLDKIDGEFDVFGVDWSTPIELAKAKLGGKYVLQGNMEPTRLYNKEAIDEGIEHIVNVMKNERHIFNLGHGILPDIPVEHAQYFIKQVQTRTKI
SIO_010081: SJPD1_RS01830
subclass of: SO_0000673
so part of: SJPD1_RS01830
location: 342449..343471
location: region:342449-343471:1
so has part: feature:342449-343471:1:exon

WP_096045714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342449-343471:1:exon

SJPD1_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01835
old locus tag: SJPD1_0370
so part of: sequence
location: 343523..344434
location: region:343523-344434:1
so has part: feature:343523-344434:1:exon
subclass of: SO_0000010

position:343523:1
position: 343523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344434:1
position: 344434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343523-344434:1:exon

SJPD1_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01835
old locus tag: SJPD1_0370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856119.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MSQIIFGPITSRRFGQSLGIDLSPSIKQCNFDCLYCELKGAKTVDKAKDTPSFLEVLDALKTALSKHQNLDVITLTANGEPTLYPELDALVSAILKIENRPKLLILSNGSTIYDEAIQTTLSNIDIVKLSLDCVSPKCFKKLDRAHKGIEIEQIIEGMQQFRARYQGTLVIEILVVEGLNDTEEEFRALNAVLHNINPDRIDVSTIDRPPAYEVKGVSIERLVELSNLLEDLHVNIAYKKNYISQKRYFSEEEIYELLKRRPQSFEDIALCFDEQSLQNLNYLVEKNALHVKNIAGVNFYKVT
SIO_010081: SJPD1_RS01835
subclass of: SO_0000673
so part of: SJPD1_RS01835
location: 343523..344434
location: region:343523-344434:1
so has part: feature:343523-344434:1:exon

WP_096045715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343523-344434:1:exon

SJPD1_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01840
old locus tag: SJPD1_0371
so part of: sequence
location: complement(344458..346533)
location: region:344458-346533:-1
so has part: feature:344458-346533:-1:exon
subclass of: SO_0000010

position:344458:-1
position: 344458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346533:-1
position: 346533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344458-346533:-1:exon

SJPD1_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01840
old locus tag: SJPD1_0371
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768549.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter permease
translation: MKTLEERLDDEKLISEFEGHRDFEKGSWHYWLIAAIAFSWSLFQLYMVIDPGNSTHARAIHLAFGLALAFSMHAMSKSPKLQLTITWYDFGIMIVGITAVLYQWYAYKDLAMRSGAWTQTDIIVGVTTILVVLEASRRVMGLPLMVVAMVFLAYDYFGPYLPDMIAHKGASLNKIVGQMVLTTEGIFGVPLGVSASFVFLFVLFGALLDRAGAGEYFIKLAYTILGRYDGGPAKAAVAASGMFGMISGSSIANTVTVGTFTIPLMKRLGFSSHKAAAVETAASVNGQLMPPIMGAAAFIMAEFLGLDYTDIVFAAFIPAFTCYIALFYIVHLEAKKNGLKGEDPNILGRVWTIFIHGIHYLIPIFFLIYTLVVLRQSAQSAAFSAIMFLMIIMLVQKPLKALIHQEKVTLSLFVEGLADIGHGMVNGGKNMVSVAIATAVAGIIVGSVTLTGIGLVLAEVIDNLANGYILGVLFLTAFVSLVLGMGLPTTANYIVMAALTAPIIMDLAGNNGYLIPALAAHMFVFYFGILADDTPPVGMAAYAAAAVAKSDPIITGIQAFIYDIRTGILPFMFFFNNELLLIGGVDANDPNDPSKWIWITNPFEIALIFGGAIFGMFAFTSATQSFILTKINNIERILLIVVIPFLMLPKLMAAKLGLPSYYFAYVIGFTLYGLIYFGQRVKYKKQQLALA
SIO_010081: SJPD1_RS01840
subclass of: SO_0000673
so part of: SJPD1_RS01840
location: complement(344458..346533)
location: region:344458-346533:-1
so has part: feature:344458-346533:-1:exon

WP_096045716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344458-346533:-1:exon

SJPD1_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01845
old locus tag: SJPD1_0372
so part of: sequence
location: complement(346601..347554)
location: region:346601-347554:-1
so has part: feature:346601-347554:-1:exon
subclass of: SO_0000010

position:346601:-1
position: 346601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347554:-1
position: 347554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346601-347554:-1:exon

SJPD1_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01845
old locus tag: SJPD1_0372
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011992407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TAXI family TRAP transporter solute-binding subunit
translation: MNRILTTLALMGTLSISLFAAEFITIGTGGVTGTYYPTGGAICQMVNKNKKETNIRCSVESTGGSVYNVNTIKAGELDFGIAQSDTAYQAYKGEGKFEGAASVPELRSAIAIYPELLALVVSQKSGIKTMADLKGKRLNLDSPGSGTNMTVDVVFEALGIKRSDLALVNELKSTEGPTMLQDNHIDGYFFVAGHPTANIKDAASSVDINIVPIAGPAIDALVKKYPYYAKGTISGTYYKGVPNDVPSIGVKAVLVTSSKVKDEVVYQVVKTILDNFDKFKELHPSYKTITKESLLEGLSVPQHPGAMRAFKEAGLLK
SIO_010081: SJPD1_RS01845
subclass of: SO_0000673
so part of: SJPD1_RS01845
location: complement(346601..347554)
location: region:346601-347554:-1
so has part: feature:346601-347554:-1:exon

WP_096045717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346601-347554:-1:exon

SJPD1_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01850
old locus tag: SJPD1_0373
so part of: sequence
location: 347753..347827
location: region:347753-347827:1
so has part: feature:347753-347827:1:exon
subclass of: SO_0000663

position:347753:1
position: 347753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347827:1
position: 347827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347753-347827:1:exon

SJPD1_RS01850
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS01850
old locus tag: SJPD1_0373
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:347785..347787,aa:Asn,seq:gtt)
SIO_010081: SJPD1_RS01850
subclass of: SO_0000673
so part of: SJPD1_RS01850
location: 347753..347827
location: region:347753-347827:1
so has part: feature:347753-347827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347753-347827:1:exon

SJPD1_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01855
old locus tag: SJPD1_0374
so part of: sequence
location: 348000..349211
location: region:348000-349211:1
so has part: feature:348000-349211:1:exon
subclass of: SO_0000010

position:348000:1
position: 348000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349211:1
position: 349211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348000-349211:1:exon

SJPD1_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01855
old locus tag: SJPD1_0374
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MASKLLKDLQVRNAKPLAQDYRLTDGEGLYLLVKPNGSKLWRYNYSFENNKYVYSIGKYPEISLERARILHQDAMKLKADGINPVDQKRKAKLEKKMATVSTFKAIAKEWLEKKKRELAEKTFEGVEQRVEKNLYPILGDMDIREIKKQDVASALKIADLRSPEVASRCLGYAKNIFEYAEDLGVIEFSVISSMTAGKFLTKYENERFAHIKDPKRLKELLIAIDSYSGEYVVRQLLRLLPLVALRPTEARAATWNEIDFEKKIWSIGKERMKMRKDHLVPLSSQALKILEELHPYTKNSKYIFQSPRKSDTPLSDNSINKALSILGFKDEQTGHGFRHIFSTTCHSNLREHQFDSLVIEACLSHKDKNKERDVYNGAKYIPERMQLMQWYAHYLDDLKNSKN
SIO_010081: SJPD1_RS01855
subclass of: SO_0000673
so part of: SJPD1_RS01855
location: 348000..349211
location: region:348000-349211:1
so has part: feature:348000-349211:1:exon

WP_168171305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348000-349211:1:exon

SJPD1_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01860
old locus tag: SJPD1_0375
so part of: sequence
location: 349417..352068
location: region:349417-352068:1
so has part: feature:349417-352068:1:exon
subclass of: SO_0000010

position:349417:1
position: 349417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352068:1
position: 352068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349417-352068:1:exon

SJPD1_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01860
old locus tag: SJPD1_0375
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MTVLEIENNLHNLVANLDKENFIFELLLAYGIPKATIKRLQGSDHDKLTSYGELVMRKKLFFKVTDNELHATIDELKSSKEVLKHLPRFVLVTDYETLLAYDVKTGDSLDIELLNIINHYDFFLPLAGMEKATFTDENPADVKASLKMAKLYDELQKNNRFETKEEVHSLNVFLTRLLFCYFAEDTNIFEDNIFTASLSSHTQIDGSDLDAYLQRLFTIFNTPNTKREPNTPAYLNAFPYVNGGLFALHVKLPTFTTRSRSLILEIGQLKWSQINPDIFGSMIQAVVTPEHRGGLGMHYTSVPNIMKVIEPLFLDELYQEFEKAYDHKSKLQDLHVRLSNIKIFDPACGSGNFLIIAYKKLRELEMSILQHIDALSHERSFQFSEIKLTQFYGIELDDFAHEVALLSLWLTEHQMNLEFYKAFGRTSPSLPLHDGGHIVHGNATRINWEEVCPKNDKDEIYILGNPPYLGARLQNKEQKADMAEVFQGVKNFNNLDYIACWFYKGTNYIKNTHAKVAFVSTNSISQGEQVGILWTHILDENIEIDFAYKSFKWQNNAKANAAVIVVIIGLRNSSNKPKYLYIDNIKQEVKNINAYLVNAENIIVQKRSQPRQRIPPLVFGNQVIDGGNLILQEDEKNEIVALYPSSEKFFRRLYGGEDFIKGFVRWCVWVKKNQLEEALAIHALKEKFEKTKQYRQSGGEVARSLVDIPYRFRYVHEAKNNLLVLPRTTTERRDYLPIGFLDNNSIVTDAIQVIYDPEIYLMGILSSKIHMLWVKIVAGRLKSDLRYSNSLCYNTFPFPNISQNQKDEITEFVFGILDEREKHSQKTLSYLYDPDKMPEGLRKAHHALDKAIEQCYRTKPFESDEERLEYLFKMYEEMTKDKK
SIO_010081: SJPD1_RS01860
subclass of: SO_0000673
so part of: SJPD1_RS01860
location: 349417..352068
location: region:349417-352068:1
so has part: feature:349417-352068:1:exon

WP_096045719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349417-352068:1:exon

SJPD1_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01865
old locus tag: SJPD1_0376
so part of: sequence
location: 352065..353237
location: region:352065-353237:1
so has part: feature:352065-353237:1:exon
subclass of: SO_0000010

position:352065:1
position: 352065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353237:1
position: 353237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352065-353237:1:exon

SJPD1_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01865
old locus tag: SJPD1_0376
inference: COORDINATES: protein motif:HMM:NF024685.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIR2 family protein
translation: MNDFIEKYRLIDRIQDSNINFLFGSGMSAGYLEILGNIENLLTQLDKEVFAEQKQKDLIRASILNKYFEGVIEKNINILDYSSLEPEEVLSILWTLDSYKNFFKTVNQLILLRRNKLLSKQVNIFTTNIDIFLERGVEEVGLESNDGFGKGFKPKYDLSNFKKSIFQKSLHFDNSSEIPVFNILKIHGSLTWKRENQNVFFDNSLEQIQKVQTTRRKSLLSVDTSKDTISSLKTKFPKRINIRNFNTFLEEYDKLSIVNPTKGKFQQTVLDQKYYDLLRIYANELERENTLLFVMGFSFADEHIKDLTIRVANSNPTLMIYIFAHTTHAKEELEQTIDIENNVKNKNIAIIPPSQSEKEDKNLKDDFSYNFDNINSRIFMQILNKIKEQK
SIO_010081: SJPD1_RS01865
subclass of: SO_0000673
so part of: SJPD1_RS01865
location: 352065..353237
location: region:352065-353237:1
so has part: feature:352065-353237:1:exon

WP_096045720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352065-353237:1:exon

SJPD1_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01870
old locus tag: SJPD1_0377
so part of: sequence
location: 353234..355078
location: region:353234-355078:1
so has part: feature:353234-355078:1:exon
subclass of: SO_0000010

position:353234:1
position: 353234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355078:1
position: 355078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353234-355078:1:exon

SJPD1_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01870
old locus tag: SJPD1_0377
inference: COORDINATES: protein motif:HMM:NF014044.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MNNQQILDDSIFKVGEVLSVDGRKIKIKVDKSKNNSHIMYKGELLKNTSVGSYVKIIKGYTRIIGKVEGEYVEEDKVYSSKDYTTEAKKINRNLSVSLLGFFDGEKFKRGIKELPLVFNECFLLDNQEFEQVHDFIEKDDEPLEIGVLSLEKGQKIQVGVNSLFASHIGVFGNTGSGKSYTLAKFYNVLFEKYQQEQKFKENARFLLIDFNGEYSHEKTIIENKQIYNLSTKQETNANSQKIPLKEKDLLDIELISILANATDKTQKPYIDRTLKFINKVKKDENPLTYFRNILKSYIKKVLKMADKEKAYMLVDYLTLIINKENNESLIETLGWHNSLKYFYKMPNTNNGQVSDSDIEETDLYKNVDSYEFPNNVVSKLVDFLYLQIVYDIYYDKAQNEHISPAINKLKSKQKDIEKVFDTSTQENSIFNSSQNFVTINLNDVNIEMKKTIPMLVVKKLYEEQKEKYKLLNTSYLNIIVDEAHNILSHISNRESETWKDYRLETFEEIIKEGRKFGVFLTIASQRPSDISSTIISQLHNYFLHRLINNKDIEAVEKTISYLDKVSFEALPILPTGSCIFAGLAAQVPVMIDIGKMSDEHKPQSDTIKLTENWK
SIO_010081: SJPD1_RS01870
subclass of: SO_0000673
so part of: SJPD1_RS01870
location: 353234..355078
location: region:353234-355078:1
so has part: feature:353234-355078:1:exon

WP_096045721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353234-355078:1:exon

SJPD1_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01875
old locus tag: SJPD1_0378
so part of: sequence
location: 355082..355906
location: region:355082-355906:1
so has part: feature:355082-355906:1:exon
subclass of: SO_0000010

position:355082:1
position: 355082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355906:1
position: 355906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355082-355906:1:exon

SJPD1_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01875
old locus tag: SJPD1_0378
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTNITSSILSDFTMTPEWVTAIATIILVLATCIYVFFSYKLTKETIKLREVETSPFISIIFDISFQAVSHSKIIIKNIGKAPAYDISFKVDEKYLSHFNGYTFENTIEYFAPEQEFFILANGFNNLKEAGFESIPITVHYKSKDNRSFTEVFNLRWQHFKYFEKDTLEDIKKSFDDLNKEIKELNTTVKNKKYFVSNKLSVLEIEKKDDYVQFIFSNGEICKINKKFIADIGFKNIENVDIDDGDIQDYSTRTKFTAEEVFSNIMNLKLSSEE
SIO_010081: SJPD1_RS01875
subclass of: SO_0000673
so part of: SJPD1_RS01875
location: 355082..355906
location: region:355082-355906:1
so has part: feature:355082-355906:1:exon

WP_096045722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355082-355906:1:exon

SJPD1_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01880
old locus tag: SJPD1_0379
so part of: sequence
location: 355909..357045
location: region:355909-357045:1
so has part: feature:355909-357045:1:exon
subclass of: SO_0000010

position:355909:1
position: 355909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357045:1
position: 357045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355909-357045:1:exon

SJPD1_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01880
old locus tag: SJPD1_0379
inference: COORDINATES: protein motif:HMM:NF014691.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MNIKDFKSGTLRQEYQYKSFLPEKINHTFTWDDPQINTMLENATRALGELNAFTRIVPNVDIFIQMHITKEANTSSKIEGTKTEMDEVLIAKEQINPEKRDDWQEVRNYIDAMNTAIKELENLPISNRLIKNIHAILLNSVRGEAKQPGEFRRSQNWIGGASLATAYYIPPHHNEVGELMSDLEKFLHNEEIFVPHLIKIAIAHYQFETIHPFLDGNGRIGRLLITLYLVSKGLLRKPSLYLSDFIEKNKSAYYEALTKVRTDNDLIHWIKFFLEAVIVTANNGAQTFQNILSLKQEMDALIVGFGKKAHNASKLIEFLYQRPIISISEIIEPLEISKPTANTLVKEFESKGILKEITGYERNKLFVFDRYLAIYSKN
SIO_010081: SJPD1_RS01880
subclass of: SO_0000673
so part of: SJPD1_RS01880
location: 355909..357045
location: region:355909-357045:1
so has part: feature:355909-357045:1:exon

WP_096045723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355909-357045:1:exon

SJPD1_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01885
old locus tag: SJPD1_0380
so part of: sequence
location: 357157..359079
location: region:357157-359079:1
so has part: feature:357157-359079:1:exon
subclass of: SO_0000010

position:357157:1
position: 357157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359079:1
position: 359079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357157-359079:1:exon

SJPD1_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01885
old locus tag: SJPD1_0380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ATP-dependent helicase
translation: MTNIIDVTYGQTGESKKTNNFGMRDMQAKAYEARNEQYLLLKAPPASGKSRALMFIALDKLYYQNIAKVIVAVPERSIGGSFEKTDLKSNGFFASWEPNPLYNLCIPGGEKSKVEAFKKFMSSDEKILICTHATLRFAFKELDDAKFDNCLLAIDEFHHVSADGENQLGELIRSVMQNSKAHIVAMTGSYFRGDSVPVLMPEDESQFSKVTYNYYEQLNGYEYLKSLGIGYHFYQGRYTSAIHEILDTNKKTILHIPNVNSGESTKDKHREVDTILDTIGAVEQITEEGIIIVKRKGDGKLLKVADLVNDEPKAREKVVTYLRNIKNVDDMDLIIALGMAKEGFDWPYCEHALTVGYRSSLTEIIQIIGRATRDSNNKTHAQFTNLIAQPDAQDSEVKLSVNNMLKAITASLLMEQVLAPNFKFKPRFDGDDEPNQKGELKIRGFKKPTSKRVEDIIESDLNDLKAAILQDEVMIKAIPGNLDAEVINRVLIPKIIKVKYPDLNDNEVEELRQHVVVDSVVKNGHIIESGDKKFIKMADKFVNIDELHIDLIDQINPFQRAFEILSKSVTTYVLKLIQESIEATRIEMTPEEAVILYKKIPVFKSEHGRMPDLNSRDFTEKRMAEALIYLNKLRREKVNG
SIO_010081: SJPD1_RS01885
subclass of: SO_0000673
so part of: SJPD1_RS01885
location: 357157..359079
location: region:357157-359079:1
so has part: feature:357157-359079:1:exon

WP_096045724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357157-359079:1:exon

SJPD1_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01890
old locus tag: SJPD1_0381
so part of: sequence
location: 359072..360223
location: region:359072-360223:1
so has part: feature:359072-360223:1:exon
subclass of: SO_0000010

position:359072:1
position: 359072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360223:1
position: 360223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359072-360223:1:exon

SJPD1_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01890
old locus tag: SJPD1_0381
inference: COORDINATES: protein motif:HMM:NF022019.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GIY-YIG nuclease family protein
translation: MVEFSLDEILADDPLGLLNEPKAITKALNEDDRLISSFEEISTFVEQNGYEPQKSANMQERTLYSRLQGIRENPEKIKALKPYDRLNILQEIEINSIDDILNNDAFGLLGDENENDIFTLKHIPKEREQTDFVAQRKPCKKFDKYEPLFKEVHQDLKKGTRKLSKFNEKFFEEGSFFILKRVLAYLEKIDNPKKDKFNKLDSRTRIIFENGTESNMLLRSFGKGLYEDGYFVSLQDDRVLDKLSQISEEDNKTGYIYILESLSSDTKIASIKNLYKVGYSTTEVTERIKNAVNEPTYLMAPVKVVSVYETYNMNTQKFEQLIHKFFGKVCLNIDIFGDASKRYTPREWFVVSLDIIEKAIELIISGEIIHYRYDEKSDKLIMI
SIO_010081: SJPD1_RS01890
subclass of: SO_0000673
so part of: SJPD1_RS01890
location: 359072..360223
location: region:359072-360223:1
so has part: feature:359072-360223:1:exon

WP_096045725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359072-360223:1:exon

SJPD1_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01895
old locus tag: SJPD1_0382
so part of: sequence
location: complement(360265..360516)
location: region:360265-360516:-1
so has part: feature:360265-360516:-1:exon
subclass of: SO_0000010

position:360265:-1
position: 360265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360516:-1
position: 360516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360265-360516:-1:exon

SJPD1_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01895
old locus tag: SJPD1_0382
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012012385.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MVEKMIERFMDQIVENVKAERTKRGISQLALAQILGHKSPNYVAKIETRKHDVSYNLEHLYKIAYEFGIEVRDLIPQMKKATK
SIO_010081: SJPD1_RS01895
subclass of: SO_0000673
so part of: SJPD1_RS01895
location: complement(360265..360516)
location: region:360265-360516:-1
so has part: feature:360265-360516:-1:exon

WP_096045726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360265-360516:-1:exon

SJPD1_RS14420
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS14420
so part of: sequence
location: complement(360631..360810)
location: region:360631-360810:-1
so has part: feature:360631-360810:-1:exon
subclass of: SO_0000010

position:360631:-1
position: 360631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360810:-1
position: 360810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360631-360810:-1:exon

SJPD1_RS14420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS14420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDDFLKSPEQVIGLSANAPICLASKRQVVTDFCPSLAKTQPTTMINAKRTFFIDVPYD
SIO_010081: SJPD1_RS14420
subclass of: SO_0000673
so part of: SJPD1_RS14420
location: complement(360631..360810)
location: region:360631-360810:-1
so has part: feature:360631-360810:-1:exon

WP_138070095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360631-360810:-1:exon

SJPD1_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01905
old locus tag: SJPD1_0384
so part of: sequence
location: 360917..361228
location: region:360917-361228:1
so has part: feature:360917-361228:1:exon
subclass of: SO_0000010

position:360917:1
position: 360917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361228:1
position: 361228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360917-361228:1:exon

SJPD1_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01905
old locus tag: SJPD1_0384
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSMIRDYLIMVLAKIIVGAFFGGLVLFGFFILYWIFRDYATAVTTMKATLTCDAAKFFSLLLLVGCFFHTAEYKSTPKKSEFNTCKYLDKVFFEHDTGIRQW
SIO_010081: SJPD1_RS01905
subclass of: SO_0000673
so part of: SJPD1_RS01905
location: 360917..361228
location: region:360917-361228:1
so has part: feature:360917-361228:1:exon

WP_096045728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360917-361228:1:exon

SJPD1_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01910
old locus tag: SJPD1_0385
so part of: sequence
location: 361228..362163
location: region:361228-362163:1
so has part: feature:361228-362163:1:exon
subclass of: SO_0000010

position:362163:1
position: 362163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361228-362163:1:exon

SJPD1_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01910
old locus tag: SJPD1_0385
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRTHILLSSIMTVVFLSGCATTPSQPNPSSLQQATSLKEYIALKRGGETINYNVIAEREHQSIIEYRTYDEAMNVADARDIMEVLDDAKGYCESIKGKSVYGDKAIQALNARPTLLSLDYVSYKSAIREQGLGKYEGFYQCLSPNDGFSIVSMKDNVELQQRAILGNKRDLKETYSRFYLIQHDKAQSLGLKTWLKGSKYAQISTKYTSFEDLLDLEKNSSVFPWRYERITGAQKYCIYHGGELFVSNALTQFKPITMDEYLFMRLETMNPTTINVFMNQETFTCKNKTTPAQSFILIHTDKQLEYKKGE
SIO_010081: SJPD1_RS01910
subclass of: SO_0000673
so part of: SJPD1_RS01910
location: 361228..362163
location: region:361228-362163:1
so has part: feature:361228-362163:1:exon

WP_096045729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361228-362163:1:exon

SJPD1_RS14825
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS14825
old locus tag: SJPD1_0386
so part of: sequence
location: 362242..362376
location: region:362242-362376:1
so has part: feature:362242-362376:1:exon
subclass of: SO_0000010

position:362242:1
position: 362242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362376:1
position: 362376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362242-362376:1:exon

SJPD1_RS14825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS14825
old locus tag: SJPD1_0386
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTWFNIIFGALSFIVTTLAIAKLRYESGYSKYSPYYKGNQHTTK
SIO_010081: SJPD1_RS14825
subclass of: SO_0000673
so part of: SJPD1_RS14825
location: 362242..362376
location: region:362242-362376:1
so has part: feature:362242-362376:1:exon

WP_256376041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362242-362376:1:exon

SJPD1_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01915
old locus tag: SJPD1_0387
so part of: sequence
location: 363059..363691
location: region:363059-363691:1
so has part: feature:363059-363691:1:exon
subclass of: SO_0000010

position:363059:1
position: 363059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363691:1
position: 363691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363059-363691:1:exon

SJPD1_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01915
old locus tag: SJPD1_0387
inference: COORDINATES: protein motif:HMM:NF012464.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAQTIGYIRVSTNNQDFQNQHHAILSYVNQKGLGKVSFVEVKISSKKSEEDRKIDELLITLQPHDHLIVSELSRIGRSVVNVVTIVNQLISKKVNIHILKEHLLIEPDMQNPFTDFQINIFSSFAQLERDLISQRTKEALQARKAKGIKLGKPKGTIQESIYDKDQAKIKELYDLGVSLTNISKKHLGYGTIKSLSEYVKNKLNKKENHA
SIO_010081: SJPD1_RS01915
subclass of: SO_0000673
so part of: SJPD1_RS01915
location: 363059..363691
location: region:363059-363691:1
so has part: feature:363059-363691:1:exon

WP_096045730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363059-363691:1:exon

SJPD1_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01920
old locus tag: SJPD1_0388
so part of: sequence
location: 363684..363914
location: region:363684-363914:1
so has part: feature:363684-363914:1:exon
subclass of: SO_0000010

position:363684:1
position: 363684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363914:1
position: 363914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363684-363914:1:exon

SJPD1_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01920
old locus tag: SJPD1_0388
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNDKVLTVMSDEFRASYDFYEEYDDMVIHKISRQIFKLNFVHGMAQLVPVSNDAAITKIESSMQSFVDMLKKQGF
SIO_010081: SJPD1_RS01920
subclass of: SO_0000673
so part of: SJPD1_RS01920
location: 363684..363914
location: region:363684-363914:1
so has part: feature:363684-363914:1:exon

WP_096045731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363684-363914:1:exon

SJPD1_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01925
old locus tag: SJPD1_0389
so part of: sequence
location: complement(363950..364654)
location: region:363950-364654:-1
so has part: feature:363950-364654:-1:exon
subclass of: SO_0000010

position:363950:-1
position: 363950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364654:-1
position: 364654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363950-364654:-1:exon

SJPD1_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01925
old locus tag: SJPD1_0389
inference: COORDINATES: protein motif:HMM:NF024252.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MFFKEFRDKLGISQKEAFEKLEIQQATLAKYESQSISPSSSVIKKYCETLNANPTFLFFGQEPHLLSATPQVSIETGYLLNDLSSLFSQDELAQKLREILIEALLKRVKGIIKEGTFVKLLDAFSLGSHVRQRPFLFLYYVFQIISVAKNQPNTTIQNAKQFIIETIQNFKTFSWKNQPAFTEKIKQDITELIDSDFTESECQLLIEQTDTVLILLERTMSPMVIKAHRGVFQS
SIO_010081: SJPD1_RS01925
subclass of: SO_0000673
so part of: SJPD1_RS01925
location: complement(363950..364654)
location: region:363950-364654:-1
so has part: feature:363950-364654:-1:exon

WP_096045732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363950-364654:-1:exon

SJPD1_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01930
old locus tag: SJPD1_0390
so part of: sequence
location: 364792..365529
location: region:364792-365529:1
so has part: feature:364792-365529:1:exon
subclass of: SO_0000010

position:364792:1
position: 364792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365529:1
position: 365529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364792-365529:1:exon

SJPD1_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01930
old locus tag: SJPD1_0390
inference: COORDINATES: protein motif:HMM:TIGR01714.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage replisome organizer N-terminal domain-containing protein
translation: MMKKYFWLKLKNDFFDREEIKLIEAMPNGKDYIIFYMKLLLKSIENNGELFFRNTIPYSAEMLANVTNTNIDTVKVSVDIFLKFELMEKWDDGTLFMVETQNMIGSESKWASYKRIERQKKTEIGHCQKMSKKIPIELDIELEKNIESSPHFLPANEIERIDFKSFKKKLLNSFPSYEFKLKQLDGENFLCTHQGFCLKNGYIYNLQTKRLCDSTESFKIWEYLYSVRSAVFEQAFIQNNQKSIS
SIO_010081: SJPD1_RS01930
subclass of: SO_0000673
so part of: SJPD1_RS01930
location: 364792..365529
location: region:364792-365529:1
so has part: feature:364792-365529:1:exon

WP_096047767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364792-365529:1:exon

SJPD1_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01935
old locus tag: SJPD1_0391
so part of: sequence
location: 365526..365711
location: region:365526-365711:1
so has part: feature:365526-365711:1:exon
subclass of: SO_0000010

position:365526:1
position: 365526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365711:1
position: 365711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365526-365711:1:exon

SJPD1_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01935
old locus tag: SJPD1_0391
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNQMEKEFFRPKEAAQFLCIGLSTLWLHIKNNKIKTLKPSPKTTIISREELLSFLNSHVL
SIO_010081: SJPD1_RS01935
subclass of: SO_0000673
so part of: SJPD1_RS01935
location: 365526..365711
location: region:365526-365711:1
so has part: feature:365526-365711:1:exon

WP_096045733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365526-365711:1:exon

SJPD1_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01940
old locus tag: SJPD1_0392
so part of: sequence
location: 366076..366903
location: region:366076-366903:1
so has part: feature:366076-366903:1:exon
subclass of: SO_0000010

position:366076:1
position: 366076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366903:1
position: 366903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366076-366903:1:exon

SJPD1_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01940
old locus tag: SJPD1_0392
inference: COORDINATES: protein motif:HMM:NF015159.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MetQ/NlpA family ABC transporter substrate-binding protein
translation: MTLKQWKSKLSILVIVLFIFTANAFAENKHLIIGISPGPYGDLFKQAIAPSLAQKGYTIEIKEFSDYVQPNLALANKSIDANLFQHPMYLKKFAADKGLKLSALISVPTAGVGIYSKKYKSIAEIKEGSSLTLANDPTNLARALRYLQSVGLIKIKPEIDATKASEKDIVENPKKLKIHPLEAAQIPRTLDSVDIAVASGNYAISSGIYPTAIDREIIPEDYINIIAVRTDDLDAQYVKDIKEVVESEAFANIMSDPAKIFKDFQKPAWLKAKTK
SIO_010081: SJPD1_RS01940
subclass of: SO_0000673
so part of: SJPD1_RS01940
location: 366076..366903
location: region:366076-366903:1
so has part: feature:366076-366903:1:exon

WP_096045734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366076-366903:1:exon

SJPD1_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01945
old locus tag: SJPD1_0393
so part of: sequence
location: 366966..367973
location: region:366966-367973:1
so has part: feature:366966-367973:1:exon
subclass of: SO_0000010

position:366966:1
position: 366966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367973:1
position: 367973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366966-367973:1:exon

SJPD1_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01945
old locus tag: SJPD1_0393
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MVNIENVTVTFQTKEASFKAVDAINLQIQEGEIFGIVGTSGAGKSTLIRTINLLQKPTSGKIWIAGEDITEYTGLKLRTIRHTIGMIFQHFNLIHTKTVFDNVAFPMVIAGASKEAILQRVPALLELVGLSDKMHVYPSTLSGGQKQRVGIARSLANNPRILLCDEPTSALDLETTNAILDLLKEINKKLGITTILITHEMDVIKKICNKVAVMDKGVVVETGSVYDIFSLPEHPFTQKLVAHTLNLELPFRILQDVQGRLIKVVYNGDRAEEPILSDAIRTFGVDINVLHGKIEYIDEKPLGVLLLNINASSAQIEQIISYLKERTASVEVFHG
SIO_010081: SJPD1_RS01945
subclass of: SO_0000673
so part of: SJPD1_RS01945
location: 366966..367973
location: region:366966-367973:1
so has part: feature:366966-367973:1:exon

WP_096045735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366966-367973:1:exon

SJPD1_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01950
old locus tag: SJPD1_0394
so part of: sequence
location: 367966..368625
location: region:367966-368625:1
so has part: feature:367966-368625:1:exon
subclass of: SO_0000010

position:367966:1
position: 367966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368625:1
position: 368625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367966-368625:1:exon

SJPD1_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01950
old locus tag: SJPD1_0394
EC number: 7.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013023711.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine ABC transporter permease
translation: MDSFIEFLPDLLKAFWETLQMVGISFFFSIILGIPLGLFLFITDKGLFWENKFLNLFSGLLINVVRSTPYVILLVLLLPLTQMLIGSTIGPIAASFSLSVAAIAFYARLVQVSLCEVDKGVIEAATAYGATPFQIIKNVLLPEALPGLMRGLTVTGISLVGYSAMAGIVGGGGVGDLAIRFGYYRYETDIMIITVVILIILVQILQVFGDSIATKVDKK
SIO_010081: SJPD1_RS01950
subclass of: SO_0000673
so part of: SJPD1_RS01950
location: 367966..368625
location: region:367966-368625:1
so has part: feature:367966-368625:1:exon

WP_096045736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367966-368625:1:exon

SJPD1_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01955
old locus tag: SJPD1_0395
so part of: sequence
location: 368778..370262
location: region:368778-370262:1
so has part: feature:368778-370262:1:exon
subclass of: SO_0000010

position:368778:1
position: 368778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370262:1
position: 370262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368778-370262:1:exon

SJPD1_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01955
old locus tag: SJPD1_0395
inference: COORDINATES: protein motif:HMM:NF013543.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic phosphate transporter
translation: MSVLWDALTNVDNLTIALLLLSLGIALFYEMINGFHDTANAVAMIIYTHSMKARDSVIMSGVMNFLGVLMGGIGVAYAIVHLLPVDIMVATNKNASLAMVYALLISAVIWNLGTWYFALPVSSSHSLIGSIIGVSATFGVLNGFDISQSVNWKVVYGVLAGLAISPVIGFGVAFFMMRLARKYIDSPKLFKSPTQEEKRKHPNFWARMGIIATGAGVSFAHGSNDGQKGIGLIMIILIGILPNYYALNMNSHQYKITQTKDAANNLARFYADNNETLVQMVSEKRLTSALKTKNTIAECNVDQVGTSASLVAQKLDNLKSYEDLVAEDIWSVRTTILCSDNFFAQAEKIYLIGDKDKSDYIATQRKALVSPIEYAPTWVIMAVALAIGIGTMIGYKRIVETIGEKIGAKPINYMQGTISQLTTMITILLANFVHAPVSTTHILSSAVTGSMVAEPDGGIQRSTVKMIVLSWIFTLPVTAVLGSAIYMLLNFFMK
SIO_010081: SJPD1_RS01955
subclass of: SO_0000673
so part of: SJPD1_RS01955
location: 368778..370262
location: region:368778-370262:1
so has part: feature:368778-370262:1:exon

WP_096045737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368778-370262:1:exon

SJPD1_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01960
old locus tag: SJPD1_0396
so part of: sequence
location: 370368..371297
location: region:370368-371297:1
so has part: feature:370368-371297:1:exon
subclass of: SO_0000010

position:370368:1
position: 370368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371297:1
position: 371297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370368-371297:1:exon

SJPD1_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01960
old locus tag: SJPD1_0396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768555.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-lactate dehydrogenase
translation: MRVGIIGAGGVGVELVSYLLTLGNMSEIVLVNRNKDKAWAEIEDFSYVASFTYARNTHLHHGDYTDCAGCDVIVITAGATLKGNQTRDELLDENATLIKTIVHELHTYAPNAILLMVTNPVDVLTHIAFKEGLYPRERLISAGTLVDTARFMKIVSQKVGIDPKNINGYVLGEHGKGSTLPWSICNICGLDVDTFCELNGLPLLDKAQIYQDVIHAGFEIFYKKGNTNHSIAASVFRIIRAIANDEHSVLPLGVYLDGEYGLSDVVLNVPVVVTREGATKILHYKLLPEELEALHVSARVMQKMAREVL
SIO_010081: SJPD1_RS01960
subclass of: SO_0000673
so part of: SJPD1_RS01960
location: 370368..371297
location: region:370368-371297:1
so has part: feature:370368-371297:1:exon

WP_096045738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370368-371297:1:exon

SJPD1_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01965
old locus tag: SJPD1_0397
so part of: sequence
location: complement(371294..373660)
location: region:371294-373660:-1
so has part: feature:371294-373660:-1:exon
subclass of: SO_0000010

position:371294:-1
position: 371294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373660:-1
position: 373660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371294-373660:-1:exon

SJPD1_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01965
old locus tag: SJPD1_0397
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014769370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoketolase family protein
translation: MKHQPLSHQELQQIHAYWCAANYLSVGQIYLLDNPLLKEPLSLKHIKPRLLGHWGTTPGLNFIYAHMNRVIIQDDLNMFFIAGPGHGGPAVVANTYLEGTYSEIYPDISQDEKGLQKLFKQFSFPGGIPSHAAPETPGSIHEGGELGYALSHAYGAVFDNPDLIACCVVGDGEAETGPLATAWHSNKFLNPKRDGVVLPILHLNGYKIANPTVLARISHDELEKLFIGYGYEPYFVEGDEPMAMHQKMAETMDSIISKIKTIWHESRVNGSTERPSWPMIILRSPKGWSGPKEVDGLKTEGSWRSHQVPLSALDQKPEHITILENWMKSYKPEELFDKKGKLIPKLASLAPKGTKRMGANPHTNGGALLQPLHLPDFKTYAVDVQHHGKTSAESTRILGNFLRDVMQQNMHNFRVFGPDETASNRLGALFEVTNRVWMAEHYATDDHLTQDGRVMEILSEHTCQGWLEGYLLTGRHGFFSCYEAFIHIIDSMFNQHAKWLKVTSREIPWRKPIASLNYLLTSHVWRQDHNGFSHQDPGFIDVVVNKKAHIVNVYFPPDANTLLWVGEHCLKSFNAINVIVAGKQPELQWLGMEAAIEHCEKGIGIWEWASNDEGCEPDVVMACCGDVPTLESLAAVSILNDVVPKLKIRFINVVDLMTLEPHEEHQHGLSHEAFNCLFPKETPVIFAYHGYPWLIHRLAYRRANHDHLHVRGYKEEGTTTTPFDMVVLNDMDRFHLVMDVMDRVPKMKPFAEVIKTKMRAKLCEHKTYIELYGQDMPEILNWKWARER
SIO_010081: SJPD1_RS01965
subclass of: SO_0000673
so part of: SJPD1_RS01965
location: complement(371294..373660)
location: region:371294-373660:-1
so has part: feature:371294-373660:-1:exon

WP_096045739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371294-373660:-1:exon

SJPD1_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01970
old locus tag: SJPD1_0398
so part of: sequence
location: 373811..374725
location: region:373811-374725:1
so has part: feature:373811-374725:1:exon
subclass of: SO_0000010

position:373811:1
position: 373811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374725:1
position: 374725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373811-374725:1:exon

SJPD1_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01970
old locus tag: SJPD1_0398
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGISIKKLEALVDDVVLPFEQFIMEDTRLARYLSNPDVAKVHNLAVAKLTIYIYSNLKHAYGLIQEGAQKHKLKEIPLENLREFYSLYFVLCREWNQQHFEAEDRFGKNLEIIEQFVYDSFAKENESKEEFFIYDSPEISQDIAKMHYKDDAKISAVNFCAEGSIDELDIQDILESCDELAEVVQDYNIAYDEAYFLGVKERLDSYATVLEKNLEFRDLGYSIAKLSLSLEEHLDSLPNHANKKKILVILNAIVEDLIGWTNAILKEKTAIDIHYLDASLFSSIIQFEMMLAPVVEEEDSLEFF
SIO_010081: SJPD1_RS01970
subclass of: SO_0000673
so part of: SJPD1_RS01970
location: 373811..374725
location: region:373811-374725:1
so has part: feature:373811-374725:1:exon

WP_138070096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373811-374725:1:exon

SJPD1_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01975
old locus tag: SJPD1_0399
so part of: sequence
location: 374755..375525
location: region:374755-375525:1
so has part: feature:374755-375525:1:exon
subclass of: SO_0000010

position:374755:1
position: 374755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375525:1
position: 375525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374755-375525:1:exon

SJPD1_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01975
old locus tag: SJPD1_0399
inference: COORDINATES: protein motif:HMM:NF039614.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine deiminase family protein
translation: MLLAITHLPSPKLQECELTFLESQAIDIEKARIEHKNYCAMLERCGAKVIVLNDNIACPDSVFVEDPIIVFDEVAVLTSMGVESRRAESASMEKVFSKYRKIERIELPAKIEGGDVLKIGKKIFVGESARTNKEGIQALEAIIKPFGYEVIPVKVTGCLHLKTGVTALDETTVLINSNWVDATAFDGFSKVEAPAIEPFGANVLKLGEIICMNEAFPKSIALVKSLGYKVETTNISEFVKAEAGLTCMSVPFTCKD
SIO_010081: SJPD1_RS01975
subclass of: SO_0000673
so part of: SJPD1_RS01975
location: 374755..375525
location: region:374755-375525:1
so has part: feature:374755-375525:1:exon

WP_096045741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374755-375525:1:exon

SJPD1_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01980
old locus tag: SJPD1_0400
so part of: sequence
location: 375651..377753
location: region:375651-377753:1
so has part: feature:375651-377753:1:exon
subclass of: SO_0000010

position:375651:1
position: 375651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377753:1
position: 377753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375651-377753:1:exon

SJPD1_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01980
old locus tag: SJPD1_0400
inference: COORDINATES: protein motif:HMM:NF018184.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MQNQHHFDKRELKIIGFLSLLFVILLLFNHALNYRLLKETIRSYENSILMRVSGKLTDWLDERFTHIEKVKYFLEKSPITTKDELRFALEQIKETSLFPYLVIGIDDGAFITSEDKYTMVPTGYDPRIREWYRDTLKMQKTNVTRPYVSLRVNQPTVSVCTPVHIFNGEGVVCGGHLFEVIQQYISSYDLLYDKALYLVDENGIVLASSNHHKDVPNFLHVETMSSDFLVLKIPRTNWNLIFEKNQAIYSERLNIQLFMNLLIYGGSIALYIILNLFWLSKNRKVENELSKQKNYFHDFMQNHTSRGLIICDSHAKIVFCNHTFMKLLNLQEPIEEHNFHDILENLVALDSSVKKEICLLITQTQESMQAKYLNIGHADNGAEQLLLTSAPFGSHEKQNSGFLLYLQDTTEMQASGEDQKSCGDVAFNAHIEKLLLFIEKNIDDERLDINKLAHVCGYSKYHLQRIFKTYCGENIASYLRRLRMEKSAFLLKYSEDKISAIATRCGFSYNQSYIRAFEKAYALSPSDFRDHHITDIHTSLRFEHPEYEIVELPCMKMLHIYNTMSDKALSNVEDLFENCHDLAKNEFPLVGIYMNDPKLSLAEVDTVMPYAFGVILDETQPQIKKNFPIKVLEAGKYAKIPFDPSKNDLEEFIQKIYTTFYKTNAYESTIMPILQFHHTSRESYLEDFAQSSDFFIFIAS
SIO_010081: SJPD1_RS01980
subclass of: SO_0000673
so part of: SJPD1_RS01980
location: 375651..377753
location: region:375651-377753:1
so has part: feature:375651-377753:1:exon

WP_096045742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375651-377753:1:exon

SJPD1_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01985
old locus tag: SJPD1_0401
so part of: sequence
location: 377875..379437
location: region:377875-379437:1
so has part: feature:377875-379437:1:exon
subclass of: SO_0000010

position:377875:1
position: 377875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379437:1
position: 379437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377875-379437:1:exon

SJPD1_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01985
old locus tag: SJPD1_0401
inference: COORDINATES: protein motif:HMM:TIGR01813.1
GO function: GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavocytochrome c
translation: MLDMQRRKAMQKLALLGGGMALFPTLDAQAKMLEKDVPKWDEEYDAIVVGSGYAGTAAMLSMMDRGLKNVLMIDKMQYMGGNSSISGGSYAMSRTSIQKENGVMDDPEMHIKDTLKSGHNLNNPEMVRIMAYEGLDAFNWLVENGVKWKLFSRSGGHSAPRNHSVGVGSYITRPLQEQIIKRGGQQRTRIIMDELVYNDKGIVMGMKVREKYEFKFDRTFDENDNKTGKVKYYRANAGVIIATGGWAADPKVRQIFNPALTPDMPTTNHYGATGYTIEKLIKDDIDLIDMQYIQIMHVTSADEDSFGFGFRTITGGYSYGMMINPKTGRRFINEIADRRICSDAIFAMNEKGKNHPLLIMDVNGAKTVEIDALQRGIEAGAVYQFETLDEMITKFNVNKEAFLDELKKYNAYVKTGKDPEFGRTFFKYKDEYITIEKPPFFVTRPGPKIHHCMGGVRTTVDCEVFNKTGKIVEGLYACGEVTGGRHGYNRLGSNSVVDCIVFGRRAGFAIAERYQKMVRS
SIO_010081: SJPD1_RS01985
subclass of: SO_0000673
so part of: SJPD1_RS01985
location: 377875..379437
location: region:377875-379437:1
so has part: feature:377875-379437:1:exon

WP_096045743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377875-379437:1:exon

SJPD1_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01990
old locus tag: SJPD1_0402
so part of: sequence
location: 379440..379868
location: region:379440-379868:1
so has part: feature:379440-379868:1:exon
subclass of: SO_0000010

position:379440:1
position: 379440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379868:1
position: 379868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379440-379868:1:exon

SJPD1_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01990
old locus tag: SJPD1_0402
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009650671.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c3 family protein
translation: MKQLWKQLLISIVLFASLCTLAMAANESESLSATPNLNDKYSEKNYPIQGVHQKLGLTCKECHSEEKAEDYSSAMKATCFKCHENYEKLQERTGHLGHNNNVHASPHFTNIDCDLCHKSHQPSQNLCVQCHGQKTMKQLIVK
SIO_010081: SJPD1_RS01990
subclass of: SO_0000673
so part of: SJPD1_RS01990
location: 379440..379868
location: region:379440-379868:1
so has part: feature:379440-379868:1:exon

WP_226372227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379440-379868:1:exon

SJPD1_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS01995
old locus tag: SJPD1_0403
so part of: sequence
location: 379879..380484
location: region:379879-380484:1
so has part: feature:379879-380484:1:exon
subclass of: SO_0000010

position:379879:1
position: 379879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380484:1
position: 380484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379879-380484:1:exon

SJPD1_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS01995
old locus tag: SJPD1_0403
inference: COORDINATES: protein motif:HMM:NF015237.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NapC/NirT family cytochrome c
translation: MKKIIIITALVSFCVTLVFVWGGAKVVKATGDAPFCGMCHSWDGLIAQTHIQDPIHGNANPKGVQATCTECHLPHSSLIAYLGIKARNGVAEGWTVLTGDASKKDWLVNREHARKNYTYDSSCLACHSTLLEKANQEAFKDEPSSKMHLKYIAFKETKEAMQCTSCHKFVGHKELGETLFQHNDTSPTSWDEWEKQRKEKK
SIO_010081: SJPD1_RS01995
subclass of: SO_0000673
so part of: SJPD1_RS01995
location: 379879..380484
location: region:379879-380484:1
so has part: feature:379879-380484:1:exon

WP_096045744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379879-380484:1:exon

SJPD1_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02000
old locus tag: SJPD1_0404
so part of: sequence
location: complement(380554..382443)
location: region:380554-382443:-1
so has part: feature:380554-382443:-1:exon
subclass of: SO_0000010

position:380554:-1
position: 380554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382443:-1
position: 382443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380554-382443:-1:exon

SJPD1_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02000
old locus tag: SJPD1_0404
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASQGFNRLIILLYLSPIVGFGGTLMGEFISRTTLNNPYANIPAQCYIETSGGAQNACMFCHTNAPARAHLGNNNPQAGLSTVTGNLQTTYSFAPVTQQTIAATINPWENTLFPERLEAAYQKSANRFDESTMLEYLKHDNWSDAYTKRGGKMGWENGQDSSPWRLFPDLSPSDLPAKEDGFVRTKSHERAIFGDITGWRAINFMPYGIFTPMSGSVSGIYIRLPKTFMQDEKGAWSETIYAQNLDLLERAITDRLEANDPQTYYGKAHDVEVHRGLYPLYTEFAHPLHYVDLRAKGTRATRVKEIRYMVKTKMFYPGEAVEKDEDAPIYLNEKQGWINNGAGWILAGFIEDAKGNLRPQKAEELMQCIGCHSDNYGFEPSAFTSGSSNTIDSTWAFPRKFPHKLGWAEMDYLAYSMKEGKATSSRGDPLNRKTQQGEFGYFLKHVVGANLYGVMPASMEAFLMETITKAHGFSDDWRTLDLQHPETLVAQQRLHVKLMGECVDRKAYLTPEGFIQPNLLYPTPTEALNGAIGYRKVVVTQRFTLGKDVFAKTPFTFRYFRNAKEAYTHLDGRPYQIGEIITDRPVEKEAILTEGAGITETLIDEKDALYDGEYLPLLNDPLVYVKALK
SIO_010081: SJPD1_RS02000
subclass of: SO_0000673
so part of: SJPD1_RS02000
location: complement(380554..382443)
location: region:380554-382443:-1
so has part: feature:380554-382443:-1:exon

WP_096045745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380554-382443:-1:exon

SJPD1_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02005
old locus tag: SJPD1_0405
so part of: sequence
location: complement(382424..384265)
location: region:382424-384265:-1
so has part: feature:382424-384265:-1:exon
subclass of: SO_0000010

position:382424:-1
position: 382424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384265:-1
position: 384265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382424-384265:-1:exon

SJPD1_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02005
old locus tag: SJPD1_0405
inference: COORDINATES: protein motif:HMM:NF017591.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF839 domain-containing protein
translation: MKSFTTLCVSLSFVASSLCAAGSVEFIGMDAPKTPEQMAKAYSEAKVIIHTASGGMIERNLSYQTLFGVKDKVGTNKNPAGQLYTASMKPLLDPFGKPLIAETPDSNSLLNVDGSLYLVTHYEYDWILSDGSSAEKTDVWHERAPMSMTLTSIKQDAKNGKLKAVDQYPIDFSKVGGIWIPCAGSQTPWNTHLGTEEDYDLFFTASSGKEFKKAQKGLKAMSELYFEGKKEANPYDYGHITEVAVDKNGKTNVTKHFAMGRGTWEMAKIMSDGKTAFFGDDGTNVGLFMYIGDAKGDLDNGSMYAAKWHQTNEDGAKDGGQATLSWIKLGHASTKEVMEWKEKYTFNDIFEAYAPASFDASKHEGFKAIKAGHSDIEYLKLKPGMEKVAAFLETRRYAAYLGATTEFNKMEGVAFNPEDKKIYIAMSYIEKGMAKDSSFANDDIKVAKNRCGGTYEIALASNVNDSNNEPILSDFVPISMHVPSMLLGEEMATDKDGNTCVVDKIANTDNLFYSSKMRTLFIGEDSGAHVNNYLWAYNIDTKKLSRILSIPAGAESTGLQVVENLNGYAYIMSNAQHLGDFTKTTSKELQQKLTPLIDKFQAPIGYIYGIPGL
SIO_010081: SJPD1_RS02005
subclass of: SO_0000673
so part of: SJPD1_RS02005
location: complement(382424..384265)
location: region:382424-384265:-1
so has part: feature:382424-384265:-1:exon

WP_096045746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382424-384265:-1:exon

SJPD1_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02010
old locus tag: SJPD1_0406
so part of: sequence
location: 384422..385162
location: region:384422-385162:1
so has part: feature:384422-385162:1:exon
subclass of: SO_0000010

position:384422:1
position: 384422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385162:1
position: 385162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384422-385162:1:exon

SJPD1_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02010
old locus tag: SJPD1_0406
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013135272.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dienelactone hydrolase family protein
translation: MKTFVAFFMLFMCATLSFAKEGFVTYVVDGKTYEGYYTTPSDEAPLVFIVHDWDGLNEYEMTRAKMLNALGYGAFAIDLFGQGVKPVTIEEKKALTNALYNDRAKMRKLLDAGYQAAKKEGANVSNAIGIGYCFGGAALLEMARMGTPLKGFAIFHGGLATPAGEDYTQTKGFILVLHGSADESVSLDEFTGLAKELEKTGIKHEMITYSGAPHAFSVFGTDRYREDADKKSWRRLVEFLGEMLSK
SIO_010081: SJPD1_RS02010
subclass of: SO_0000673
so part of: SJPD1_RS02010
location: 384422..385162
location: region:384422-385162:1
so has part: feature:384422-385162:1:exon

WP_096045747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384422-385162:1:exon

SJPD1_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02015
old locus tag: SJPD1_0407
so part of: sequence
location: 385208..385579
location: region:385208-385579:1
so has part: feature:385208-385579:1:exon
subclass of: SO_0000010

position:385208:1
position: 385208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385579:1
position: 385579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385208-385579:1:exon

SJPD1_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02015
old locus tag: SJPD1_0407
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768558.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSRLFQIDPYAGISYGLYNSIKGDKGSFEDFLLHYDSTGANNEDSSWLTKLVKDDNNKALSSPAVWEAMNTLGVNGLDLMSSVSSSDFFDTQASALKLQLMQAFSKREDYAQMKPLLEQLMS
SIO_010081: SJPD1_RS02015
subclass of: SO_0000673
so part of: SJPD1_RS02015
location: 385208..385579
location: region:385208-385579:1
so has part: feature:385208-385579:1:exon

WP_096045748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385208-385579:1:exon

SJPD1_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02020
old locus tag: SJPD1_0408
so part of: sequence
location: complement(385576..385920)
location: region:385576-385920:-1
so has part: feature:385576-385920:-1:exon
subclass of: SO_0000010

position:385576:-1
position: 385576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385920:-1
position: 385920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385576-385920:-1:exon

SJPD1_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02020
old locus tag: SJPD1_0408
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768559.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMIRIFLSLIMALSAYSAQKSQDIEIPRTAYKDIYKYYLLEVGKQATVNYVVLRRQSFDTILYIKAEINCPSRYFRQIGYNAKSARNIPANNLTEWYQPAIGTIESDIVSYVCR
SIO_010081: SJPD1_RS02020
subclass of: SO_0000673
so part of: SJPD1_RS02020
location: complement(385576..385920)
location: region:385576-385920:-1
so has part: feature:385576-385920:-1:exon

WP_096047769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385576-385920:-1:exon

SJPD1_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02025
old locus tag: SJPD1_0409
so part of: sequence
location: 386089..387393
location: region:386089-387393:1
so has part: feature:386089-387393:1:exon
subclass of: SO_0000010

position:386089:1
position: 386089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387393:1
position: 387393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386089-387393:1:exon

SJPD1_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02025
old locus tag: SJPD1_0409
EC number: 2.7.7.65
EC number: 3.1.4.52
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional diguanylate cyclase/phosphodiesterase
translation: MRNSVNNNQEQQDKIKFLTQELLRVQKNLVEQFYTDSLTRLPNLYQLRHDLEEGSDFTLIIANIDNFKLLNDFYGFVVGDFILESFAKSLKTELDEVSVYRIAGDEFAILVGKRMSFYLLKNYLTHLSKQLTHLKYAYAQTEIYVDCTLSSSASFTSDDIFSKVNMALKYAKKEQLKFWIYEDTMNFSQEYESNLKYATKVRKAIVDFSGIVPYFQPIIDNKTNEIIKFEALSRLVDEDGAIHSPHNFIPVAKMIKVYDKITMAIIDKSFQVFKSHAFDFSINLSFEDIINQDIYDFIISKLRDSNMGHRVTFELLESEKVNDFNKVIHFFNEIKRYGAKVAIDDFGSGFSNFSYITKLSPDFIKIDGSLIKDIDQDKNAQIIVETIVDFSKKLGIKTVAEFVHSSTVLSTVKQLGIDYSQGYFIDMPSPHILK
SIO_010081: SJPD1_RS02025
subclass of: SO_0000673
so part of: SJPD1_RS02025
location: 386089..387393
location: region:386089-387393:1
so has part: feature:386089-387393:1:exon

WP_096045749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386089-387393:1:exon

SJPD1_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02030
old locus tag: SJPD1_0410
so part of: sequence
location: complement(387412..387762)
location: region:387412-387762:-1
so has part: feature:387412-387762:-1:exon
subclass of: SO_0000010

position:387412:-1
position: 387412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387762:-1
position: 387762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387412-387762:-1:exon

SJPD1_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02030
old locus tag: SJPD1_0410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856134.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLGKCPYCGGAVISQKLTIQGQKVNLYSCEHAKKERDINDDYVFSSDATCRFRVYSNTFLRWNKRSLSEYEMKQLLKEGQIAVRLHGRKGTSEYFKYVIPDPEYGVSILWDTEVA
SIO_010081: SJPD1_RS02030
subclass of: SO_0000673
so part of: SJPD1_RS02030
location: complement(387412..387762)
location: region:387412-387762:-1
so has part: feature:387412-387762:-1:exon

WP_096045750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387412-387762:-1:exon

SJPD1_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02035
old locus tag: SJPD1_0411
so part of: sequence
location: complement(387844..389103)
location: region:387844-389103:-1
so has part: feature:387844-389103:-1:exon
subclass of: SO_0000010

position:387844:-1
position: 387844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389103:-1
position: 389103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387844-389103:-1:exon

SJPD1_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02035
old locus tag: SJPD1_0411
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANSESIKKYLIEGNKSYLDNDDNNGTILMLSGVWGSGKTHFWKNIIETDLIPKIKDKKKSYIFVSLYGKDSIEELQNEILQKSYSFVQSRETDIISQTYSVFTKMTSLMPKITVFGVGIDASNTSKQIEELNNNEKLKKGTDALLNGGVICFDDFERKSSKIDLNDLFGFITNLTENFQTKTIIILNQEFFQDHDTNVFNTVKEKSVNKFILYNPTIEELFEVIYQDEKYAPLQSYKTTILDAIKLSEEKNARIYIQVLNNCLEYVEKIKDTNERAIYLLTLITVIFSKYNLIIRLSVNIPRRLNSSDSKKEISPDFYINIPEKVSYSLEVIDTKNPPIIEVFLHELKKRVEQRYSSSESKTIPTEALNYHFAYIEQNKNMLFIIYKYFFHKKYFSQNDIEVVNKISNFVESGILLKE
SIO_010081: SJPD1_RS02035
subclass of: SO_0000673
so part of: SJPD1_RS02035
location: complement(387844..389103)
location: region:387844-389103:-1
so has part: feature:387844-389103:-1:exon

WP_096045751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387844-389103:-1:exon

SJPD1_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: trxC
locus tag: SJPD1_RS02040
old locus tag: SJPD1_0412
so part of: sequence
location: complement(389107..389529)
location: region:389107-389529:-1
so has part: feature:389107-389529:-1:exon
subclass of: SO_0000010

position:389107:-1
position: 389107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389529:-1
position: 389529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389107-389529:-1:exon

SJPD1_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: trxC
locus tag: SJPD1_RS02040
old locus tag: SJPD1_0412
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856138.1
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO process: GO:0006662 - glycerol ether metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin TrxC
translation: MKVICPSCLATNNVPKQEVYKKVNCGKCKASLLDPHPIALTSDTLEAVIESTDVPVIVDFWAPWCGPCKGFAPTFQQAARAYPLRVLFAKVDTEAEQFLASRFKIRSIPTLIVFKNGKEVERVSGALSDEDLDRFVERFL
SIO_010081: SJPD1_RS02040
subclass of: SO_0000673
so part of: SJPD1_RS02040
location: complement(389107..389529)
location: region:389107-389529:-1
so has part: feature:389107-389529:-1:exon

WP_096045752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389107-389529:-1:exon

SJPD1_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02045
old locus tag: SJPD1_0413
so part of: sequence
location: complement(389533..390369)
location: region:389533-390369:-1
so has part: feature:389533-390369:-1:exon
subclass of: SO_0000010

position:389533:-1
position: 389533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390369:-1
position: 390369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389533-390369:-1:exon

SJPD1_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02045
old locus tag: SJPD1_0413
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768563.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4392 domain-containing protein
translation: MRNFHTIEEIVLQHSTRNMDKIQAHFPNEHTKNAVQAFLKLDKGVVFIYTGFYVAGYAETDGPLGAYFLAKAFEKLGYTPVIITDSFCEDYFFDIKTLYIPIEGLENQGYKILLDTYKPVAHLSIERCGQNHEGLYLNSRGVDIKEFTAPVDELFKLGSQTAPSFGIGDGGNEVGMGSFAAVLKNKELFYDYCVIPCDYPMIASVSNWGGYGFIAELERVLHVNVLPSFEELEQYLAFIVSKGSVDGIKRESVMSVDGKEWAIEPEILQALKDYATKG
SIO_010081: SJPD1_RS02045
subclass of: SO_0000673
so part of: SJPD1_RS02045
location: complement(389533..390369)
location: region:389533-390369:-1
so has part: feature:389533-390369:-1:exon

WP_096045753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389533-390369:-1:exon

SJPD1_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02050
old locus tag: SJPD1_0414
so part of: sequence
location: 390450..391217
location: region:390450-391217:1
so has part: feature:390450-391217:1:exon
subclass of: SO_0000010

position:390450:1
position: 390450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391217:1
position: 391217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390450-391217:1:exon

SJPD1_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02050
old locus tag: SJPD1_0414
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856140.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative hydro-lyase
translation: MYPKELRSKIAKGEFTRPTAGECPGYIQMNMVALPREYAKRFEAFAKENSKAIPVLEIIQEGHFSKVLAPGADILNEIPKYNILKDGVVVETVTDITPYYNLDLVFFLIGCSFSFETALIENGMPLRHVDQQKNVAMYRTNIALKPVEGFAGEMVVSMRPIKKEKVADACVVTSHFPRMHGSPIQVGYPEMIGIRDVSKPDYGDAIEIKADEIPLFWPCGVTPQNVITAMKLPFAITHAPGHMFVTDKKDSEYYE
SIO_010081: SJPD1_RS02050
subclass of: SO_0000673
so part of: SJPD1_RS02050
location: 390450..391217
location: region:390450-391217:1
so has part: feature:390450-391217:1:exon

WP_096045754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390450-391217:1:exon

SJPD1_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02055
old locus tag: SJPD1_0415
so part of: sequence
location: complement(391221..392120)
location: region:391221-392120:-1
so has part: feature:391221-392120:-1:exon
subclass of: SO_0000010

position:391221:-1
position: 391221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392120:-1
position: 392120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391221-392120:-1:exon

SJPD1_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02055
old locus tag: SJPD1_0415
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MMRLILFLMLCWLPLSAIEYIKHYEIFVKQYQENDTLLLVSRRFELSGVTFYLTTNTQTLQTKVLPLDTSKLTPLDENFSKTPFAQQLNNATALAAKGGATHATTQKDKAIYLTMDLCPSTKKGYESDFIEQLTKQNGKTPIAIAISSAWKDHHEKEFTALVNNPLLQITWVNHTHTHFYDSHLPERENFMLHVNTDVKTEILGVEKKLLEEGITPSVFFRFPGLISDEKLMRELRETYFLIPLSANAWIAKNEPIKTGSFILIHGNKNEPLGITMLEKKLPEVVKTYQFHSLQEAFVP
SIO_010081: SJPD1_RS02055
subclass of: SO_0000673
so part of: SJPD1_RS02055
location: complement(391221..392120)
location: region:391221-392120:-1
so has part: feature:391221-392120:-1:exon

WP_096045755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391221-392120:-1:exon

SJPD1_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02060
old locus tag: SJPD1_0416
so part of: sequence
location: 392263..392520
location: region:392263-392520:1
so has part: feature:392263-392520:1:exon
subclass of: SO_0000010

position:392263:1
position: 392263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392520:1
position: 392520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392263-392520:1:exon

SJPD1_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02060
old locus tag: SJPD1_0416
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856141.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVNEAVLEMRYSGIPEEDIEAILEICKKKGLTPQNIDKELEAKGLDKVFELEYDASESWFERGATSSAPSHKAPAKQGLEKEKK
SIO_010081: SJPD1_RS02060
subclass of: SO_0000673
so part of: SJPD1_RS02060
location: 392263..392520
location: region:392263-392520:1
so has part: feature:392263-392520:1:exon

WP_096045756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392263-392520:1:exon

SJPD1_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02065
old locus tag: SJPD1_0417
so part of: sequence
location: 392521..392937
location: region:392521-392937:1
so has part: feature:392521-392937:1:exon
subclass of: SO_0000010

position:392521:1
position: 392521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392937:1
position: 392937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392521-392937:1:exon

SJPD1_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02065
old locus tag: SJPD1_0417
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856142.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ester cyclase
translation: MSKQIKQIIEEYYDVLWNEKKLDQANRFLDPSLNFRGSLGMRVDSINGFCDYAKMLFSAFPNLYHVIEDIVIEGDKAAVRLVYTATHSGKLFGFEPTGNRIRYSGACFFKFENEKIVDAWVLGDLNALYGQLNAIEHR
SIO_010081: SJPD1_RS02065
subclass of: SO_0000673
so part of: SJPD1_RS02065
location: 392521..392937
location: region:392521-392937:1
so has part: feature:392521-392937:1:exon

WP_087437677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392521-392937:1:exon

SJPD1_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02070
old locus tag: SJPD1_0418
so part of: sequence
location: complement(392915..393787)
location: region:392915-393787:-1
so has part: feature:392915-393787:-1:exon
subclass of: SO_0000010

position:392915:-1
position: 392915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393787:-1
position: 393787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392915-393787:-1:exon

SJPD1_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02070
old locus tag: SJPD1_0418
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768567.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MTYTKAFGITSLGMLLMSFESPLIKMTHVPAQNFTFYFGLCMFLTMNITLYSKHQNNIVSIYINHLSTILWSGFCIGLSNLLFILAIKHTSVASAVFILSTGPLVSAMIAFILFKQKTPRRTFGAIFFVFIGLSIILFNDLELGNMEGNLYAFGCVFAFVSMLSVLERDKEANRLACFGTGALIASLLAAVTAPISVPDSYSLWIIVFMGALLTPLSRAFIGIGTKFLPSVEVALLTIIEPVLAPFWVWILMDEKPHINTLMGGAIIVTTLIVHSMMAHKEAKINDVQWH
SIO_010081: SJPD1_RS02070
subclass of: SO_0000673
so part of: SJPD1_RS02070
location: complement(392915..393787)
location: region:392915-393787:-1
so has part: feature:392915-393787:-1:exon

WP_096045757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392915-393787:-1:exon

SJPD1_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02075
old locus tag: SJPD1_0419
so part of: sequence
location: complement(393792..394025)
location: region:393792-394025:-1
so has part: feature:393792-394025:-1:exon
subclass of: SO_0000010

position:393792:-1
position: 393792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394025:-1
position: 394025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393792-394025:-1:exon

SJPD1_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02075
old locus tag: SJPD1_0419
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856144.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VF530 family protein
translation: MNNNEHNNNPLHGVTLEKLVTELQAHYGWEKLDEMLRMNCFHEKPSINSCLKFFRKTPWAREKIEKLYINFRKNQTK
SIO_010081: SJPD1_RS02075
subclass of: SO_0000673
so part of: SJPD1_RS02075
location: complement(393792..394025)
location: region:393792-394025:-1
so has part: feature:393792-394025:-1:exon

WP_096045758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393792-394025:-1:exon

SJPD1_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02080
old locus tag: SJPD1_0420
so part of: sequence
location: complement(394169..394921)
location: region:394169-394921:-1
so has part: feature:394169-394921:-1:exon
subclass of: SO_0000010

position:394169:-1
position: 394169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394921:-1
position: 394921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394169-394921:-1:exon

SJPD1_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02080
old locus tag: SJPD1_0420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012109228.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MSKIVLITGATSGFGEATAEKFANAGYKVIATGRRKERLDALKTRLAHCDILTLCFDITQKNEVFGAIASLPEAYKSIDILVNNAGLALGLEHANEASLDDWEKMIDTNIKGLLYMTKAVLPVMVERKTGYIFNIGSTAGSWPYEGGNVYGATKAFVKQFSLNLRTDLKGTHVRVTNIEPGFSLTEFSDVRFKGDKVKADSVYQNTTPLSKEDIANAIFSLAELPAHINVNRIEIMPTVQSYAGLSVERN
SIO_010081: SJPD1_RS02080
subclass of: SO_0000673
so part of: SJPD1_RS02080
location: complement(394169..394921)
location: region:394169-394921:-1
so has part: feature:394169-394921:-1:exon

WP_096045759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394169-394921:-1:exon

SJPD1_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02090
old locus tag: SJPD1_0421
so part of: sequence
location: 395268..396389
location: region:395268-396389:1
so has part: feature:395268-396389:1:exon
subclass of: SO_0000010

position:395268:1
position: 395268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396389:1
position: 396389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395268-396389:1:exon

SJPD1_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02090
old locus tag: SJPD1_0421
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter substrate-binding protein
translation: MFSKLTVSLAACSMLVSASVAATNVIKIGVQAPITGQYANEGQSIDNGVKLIVDQYNAKGGVLGKKIEVVTCDDQGTAQQAAICAKKLVNEGVKAVIGSYTSGATEAAQTTYNRAGVLQTSDGTSDSLIAHKYWTFFRNSFPNSAEADYTAKYFVDGKQYKKIVILSDYSSYSTDLADATIKALKAKNANIIYEGKIKSGSQNFTATLTKIKAMEPDVIYFSGYYTDGGLLRAQQMQLGIKADFVGGDSNDNPDYMKLAGESAQGTLLINVPTPDILPYDIAKTFLVDYKAKFNAMPASIWSLMNVDGLRVILHVMEQTKSEDTKVIAEEMHKLKDFPGITGPVTFREDGERTGGGYMTYEVQADKSYKIVYQ
SIO_010081: SJPD1_RS02090
subclass of: SO_0000673
so part of: SJPD1_RS02090
location: 395268..396389
location: region:395268-396389:1
so has part: feature:395268-396389:1:exon

WP_096047770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395268-396389:1:exon

SJPD1_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02095
old locus tag: SJPD1_0422
so part of: sequence
location: 396472..397374
location: region:396472-397374:1
so has part: feature:396472-397374:1:exon
subclass of: SO_0000010

position:396472:1
position: 396472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397374:1
position: 397374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396472-397374:1:exon

SJPD1_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02095
old locus tag: SJPD1_0422
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768573.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MDIFLQQMVNGLTIGSLYALVALGYTMVYGVMRLINFAHGDLVAFSAFIGLSVYAQIFGESATSLGVIITVFALTALSVACVGVLLERLAYRPLRTAPRLSAVVSALGAGLVIQNSVMLIWGPNMKIFPSNLFPSTIWAVGGIVITFTQVMILGVSSVLMVGLYFFIHQTKIGTAIRAVAIDQDAAKLMGINVGRIIMIIFIIGSALGAVAGLFIGSYYRGITFDMGWMYGLNAFVAAIMGGIGNIPGAMLGGLLLGLFNAMITGYISTQWAETFTFVLLIAILVLRPTGILGETVAEKV
SIO_010081: SJPD1_RS02095
subclass of: SO_0000673
so part of: SJPD1_RS02095
location: 396472..397374
location: region:396472-397374:1
so has part: feature:396472-397374:1:exon

WP_096045761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396472-397374:1:exon

SJPD1_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02100
old locus tag: SJPD1_0423
so part of: sequence
location: 397371..398321
location: region:397371-398321:1
so has part: feature:397371-398321:1:exon
subclass of: SO_0000010

position:397371:1
position: 397371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398321:1
position: 398321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397371-398321:1:exon

SJPD1_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02100
old locus tag: SJPD1_0423
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768574.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MMNKSTLITLCLLAFMGFFPLFVDSAWLAIGTTFLVFSVVALSQDIILGRAGVFHMGHAMFFGLGAYTTAILNVNFGLPILATLLPAVLIPMFFAFLLVAPIIHLRGDYLLVATIGFNIIFIQVLENDVFGLTGGPNGLFGIDVVKLFGYELSSQTHMYYMAFLLLGITLLIIRNLDRSKFGRAMFYIHKDEIAAQSMGINIRYFKLYAFILGAGIAGAAGSMFSIQYSAVSPEAFNVTQSIMFFTIVLVGGSASLPGILIGTFIMFVLPEMFREFETARYLVFGIAMILTMILRPRGIWPVRFGNIPSFLKKEVK
SIO_010081: SJPD1_RS02100
subclass of: SO_0000673
so part of: SJPD1_RS02100
location: 397371..398321
location: region:397371-398321:1
so has part: feature:397371-398321:1:exon

WP_096045762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397371-398321:1:exon

SJPD1_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02105
old locus tag: SJPD1_0424
so part of: sequence
location: 398318..399100
location: region:398318-399100:1
so has part: feature:398318-399100:1:exon
subclass of: SO_0000010

position:398318:1
position: 398318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399100:1
position: 399100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398318-399100:1:exon

SJPD1_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02105
old locus tag: SJPD1_0424
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768575.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSEYILEISHVSKYFQGLIAINDLSMKVKKGQIYGIIGPNGAGKTTLFNCITGIYRPEIGKILWKGRDIKGASPDKIAAFGILRTFQTIRLFSEMSVAENIMSGRHIKSQQRWYNGVIPTPAYYKDERANWEKVGELMSFFNLSEYSTTPAGDLSYGIQRRIEMARALAAEPELLILDEPAAGLNENETLELTQTIRKIQAMGVTIMMIEHDMDMVMSLCEYITVINFGAKISEGIPSFVQDDPMVVEAYIGSDEDDDDE
SIO_010081: SJPD1_RS02105
subclass of: SO_0000673
so part of: SJPD1_RS02105
location: 398318..399100
location: region:398318-399100:1
so has part: feature:398318-399100:1:exon

WP_096045763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398318-399100:1:exon

SJPD1_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02110
old locus tag: SJPD1_0425
so part of: sequence
location: 399093..399818
location: region:399093-399818:1
so has part: feature:399093-399818:1:exon
subclass of: SO_0000010

position:399093:1
position: 399093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399818:1
position: 399818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399093-399818:1:exon

SJPD1_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02110
old locus tag: SJPD1_0425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNEKLLDIKNLHVNYGAVEAIKGIDLHVNRGEVVTILGANGAGKTTTLQTISGLLKSNAGSIIFDNKDITQTPAHEIVSLGMSHAPEGRRVFGTLSVEENLMMGAYTLKKYDALTLDWIYEILPRLYERKQQLAGTLSGGEQQMLAIGRAIMSKPKLLILDEPSLGLAPVLVKVIFKAIKEISKSGVTVLLVEQNAKAALKLANRGYVLELGKITYCGSSEELLTSEVIQEAYLGRKKEVL
SIO_010081: SJPD1_RS02110
subclass of: SO_0000673
so part of: SJPD1_RS02110
location: 399093..399818
location: region:399093-399818:1
so has part: feature:399093-399818:1:exon

WP_096045764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399093-399818:1:exon

SJPD1_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02115
old locus tag: SJPD1_0426
so part of: sequence
location: complement(399853..400095)
location: region:399853-400095:-1
so has part: feature:399853-400095:-1:exon
subclass of: SO_0000010

position:399853:-1
position: 399853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400095:-1
position: 400095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399853-400095:-1:exon

SJPD1_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02115
old locus tag: SJPD1_0426
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768578.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGILQWIVIGVLVYAIYYIINKYERKVDELTRLIELNRDEIDKNKQDIAKNSEKIAKASEGVAKNKEKLELNQTIIEKLK
SIO_010081: SJPD1_RS02115
subclass of: SO_0000673
so part of: SJPD1_RS02115
location: complement(399853..400095)
location: region:399853-400095:-1
so has part: feature:399853-400095:-1:exon

WP_087437685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399853-400095:-1:exon

SJPD1_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02120
old locus tag: SJPD1_0427
so part of: sequence
location: complement(400147..400890)
location: region:400147-400890:-1
so has part: feature:400147-400890:-1:exon
subclass of: SO_0000010

position:400147:-1
position: 400147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400890:-1
position: 400890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400147-400890:-1:exon

SJPD1_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02120
old locus tag: SJPD1_0427
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768579.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YaaA family protein
translation: MKILFSPSETKSALTTHGLLKKESLVFPSLYEKRHQVLKQYQALLETHDTTLLQNLFGIKDTQKILALSSKNIFDSFTCKAILRYSGIAYDHLLFETLDKNAQTYIENHVMIFSNLFGPLLAGDLIPEYKLQQGESLNGFKTEIFYKEYFNDAMDAWIGDETILDLRAGYYEKFYTLKQPFITMKFLKNDKVVSHFAKAYRGQVLREIAIHQPFNEKEFGKIGFEGLRIREIKEQKLKREYIFDIID
SIO_010081: SJPD1_RS02120
subclass of: SO_0000673
so part of: SJPD1_RS02120
location: complement(400147..400890)
location: region:400147-400890:-1
so has part: feature:400147-400890:-1:exon

WP_096045765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400147-400890:-1:exon

SJPD1_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02125
old locus tag: SJPD1_0428
so part of: sequence
location: 401008..401083
location: region:401008-401083:1
so has part: feature:401008-401083:1:exon
subclass of: SO_0000663

position:401008:1
position: 401008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401083:1
position: 401083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401008-401083:1:exon

SJPD1_RS02125
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS02125
old locus tag: SJPD1_0428
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:401041..401043,aa:Thr,seq:tgt)
SIO_010081: SJPD1_RS02125
subclass of: SO_0000673
so part of: SJPD1_RS02125
location: 401008..401083
location: region:401008-401083:1
so has part: feature:401008-401083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401008-401083:1:exon

SJPD1_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02130
old locus tag: SJPD1_0429
so part of: sequence
location: 401136..401220
location: region:401136-401220:1
so has part: feature:401136-401220:1:exon
subclass of: SO_0000663

position:401136:1
position: 401136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401220:1
position: 401220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401136-401220:1:exon

SJPD1_RS02130
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS02130
old locus tag: SJPD1_0429
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:401170..401172,aa:Tyr,seq:gta)
SIO_010081: SJPD1_RS02130
subclass of: SO_0000673
so part of: SJPD1_RS02130
location: 401136..401220
location: region:401136-401220:1
so has part: feature:401136-401220:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401136-401220:1:exon

SJPD1_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02135
old locus tag: SJPD1_0430
so part of: sequence
location: 401223..401299
location: region:401223-401299:1
so has part: feature:401223-401299:1:exon
subclass of: SO_0000663

position:401223:1
position: 401223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401299:1
position: 401299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401223-401299:1:exon

SJPD1_RS02135
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS02135
old locus tag: SJPD1_0430
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:401257..401259,aa:Gly,seq:tcc)
SIO_010081: SJPD1_RS02135
subclass of: SO_0000673
so part of: SJPD1_RS02135
location: 401223..401299
location: region:401223-401299:1
so has part: feature:401223-401299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401223-401299:1:exon

SJPD1_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02140
old locus tag: SJPD1_0431
so part of: sequence
location: 401446..401520
location: region:401446-401520:1
so has part: feature:401446-401520:1:exon
subclass of: SO_0000663

position:401446:1
position: 401446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401520:1
position: 401520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401446-401520:1:exon

SJPD1_RS02140
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS02140
old locus tag: SJPD1_0431
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:401478..401480,aa:Thr,seq:ggt)
SIO_010081: SJPD1_RS02140
subclass of: SO_0000673
so part of: SJPD1_RS02140
location: 401446..401520
location: region:401446-401520:1
so has part: feature:401446-401520:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401446-401520:1:exon

SJPD1_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: tuf
locus tag: SJPD1_RS02145
old locus tag: SJPD1_0432
so part of: sequence
location: 401592..402791
location: region:401592-402791:1
so has part: feature:401592-402791:1:exon
subclass of: SO_0000010

position:401592:1
position: 401592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402791:1
position: 402791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401592-402791:1:exon

SJPD1_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: tuf
locus tag: SJPD1_RS02145
old locus tag: SJPD1_0432
inference: COORDINATES: similar to AA sequence:RefSeq:YP_002343904.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MAKEKFSRTKPHVNIGTIGHVDHGKTTLTAAISAVLATKGLCEFKDYDGIDNAPEERERGITIATSHIEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDEELLELVEMEIRELLSSYDFPGDDTPIVAGSALKALEEAKAGTVGAWGEKILALMAAVDAYIPNPVRETDKDFLMPIEDVFSISGRGTVVTGKIDRGAVKIGETIEIVGIKDTKTTTVTGVEMFRKEMERGEAGDNCGILLRGIKKEEVERGMVLCKPKSITPHTDFEAEIYVLSKEEGGRHTPFFNNYRPQFYVRTTDVTGSITLPEGTEMVMPGDNVKIKVALIAPIALEEGTRFAIREGGRTVGAGVVATIIK
SIO_010081: SJPD1_RS02145
subclass of: SO_0000673
so part of: SJPD1_RS02145
location: 401592..402791
location: region:401592-402791:1
so has part: feature:401592-402791:1:exon

WP_096045766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401592-402791:1:exon

SJPD1_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rpmG
locus tag: SJPD1_RS02150
old locus tag: SJPD1_0433
so part of: sequence
location: 402845..403003
location: region:402845-403003:1
so has part: feature:402845-403003:1:exon
subclass of: SO_0000010

position:402845:1
position: 402845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403003:1
position: 403003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402845-403003:1:exon

SJPD1_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rpmG
locus tag: SJPD1_RS02150
old locus tag: SJPD1_0433
inference: COORDINATES: similar to AA sequence:RefSeq:YP_002343905.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L33
translation: MTVKIGLKCSECGDINYTTTKNSKTVTEKVELSKYCPRLKKHTVHKEVKLKS
SIO_010081: SJPD1_RS02150
subclass of: SO_0000673
so part of: SJPD1_RS02150
location: 402845..403003
location: region:402845-403003:1
so has part: feature:402845-403003:1:exon

WP_012856149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402845-403003:1:exon

SJPD1_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02155
old locus tag: SJPD1_0434
so part of: sequence
location: 403031..403106
location: region:403031-403106:1
so has part: feature:403031-403106:1:exon
subclass of: SO_0000663

position:403031:1
position: 403031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403106:1
position: 403106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403031-403106:1:exon

SJPD1_RS02155
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS02155
old locus tag: SJPD1_0434
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:403064..403066,aa:Trp,seq:cca)
SIO_010081: SJPD1_RS02155
subclass of: SO_0000673
so part of: SJPD1_RS02155
location: 403031..403106
location: region:403031-403106:1
so has part: feature:403031-403106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:403031-403106:1:exon

SJPD1_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: secE
locus tag: SJPD1_RS02160
so part of: sequence
location: 403124..403303
location: region:403124-403303:1
so has part: feature:403124-403303:1:exon
subclass of: SO_0000010

position:403124:1
position: 403124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403303:1
position: 403303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403124-403303:1:exon

SJPD1_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: secE
locus tag: SJPD1_RS02160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768582.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecE
translation: MEKLRAYYHHSKAELSKVIFPTKEQIRNAFISVFVVVTVISLFLALIDAIMSFSLSSLI
SIO_010081: SJPD1_RS02160
subclass of: SO_0000673
so part of: SJPD1_RS02160
location: 403124..403303
location: region:403124-403303:1
so has part: feature:403124-403303:1:exon

WP_087437688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403124-403303:1:exon

SJPD1_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nusG
locus tag: SJPD1_RS02165
old locus tag: SJPD1_0435
so part of: sequence
location: 403313..403843
location: region:403313-403843:1
so has part: feature:403313-403843:1:exon
subclass of: SO_0000010

position:403313:1
position: 403313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403843:1
position: 403843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403313-403843:1:exon

SJPD1_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nusG
locus tag: SJPD1_RS02165
old locus tag: SJPD1_0435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004322123.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination protein NusG
translation: MAHRWYAIQTYAGSEQAVKKGIITLVNDHGIADKVEQILVPTEDVIEVKNGKKKISERSLYPGYAFAKLDLDTALWHLIQSLPKVGRFIGEAKKPTPLSEKDIALILEKAEKKGAPKPKIFFENGESVRITEGPFANFTGSVEEYDMVHGKLTLNVSIFGRSTPVEILYSQVEKIV
SIO_010081: SJPD1_RS02165
subclass of: SO_0000673
so part of: SJPD1_RS02165
location: 403313..403843
location: region:403313-403843:1
so has part: feature:403313-403843:1:exon

WP_087437689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403313-403843:1:exon

SJPD1_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rplK
locus tag: SJPD1_RS02170
old locus tag: SJPD1_0436
so part of: sequence
location: 403860..404285
location: region:403860-404285:1
so has part: feature:403860-404285:1:exon
subclass of: SO_0000010

position:403860:1
position: 403860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404285:1
position: 404285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403860-404285:1:exon

SJPD1_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rplK
locus tag: SJPD1_RS02170
old locus tag: SJPD1_0436
inference: COORDINATES: similar to AA sequence:RefSeq:YP_002343908.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11
translation: MAKKVIGEIKLQIEAAKANPSPPVGPALGQRGVNIMEFCKAFNERTKELAGFRIPVVITVYADKSFTFITKQPPATDLIKKAVGLKSGSSNPLKNKVGTLSKAQILEIVEKKIADLNTTDREAAAKIISGSARSIGINVVD
SIO_010081: SJPD1_RS02170
subclass of: SO_0000673
so part of: SJPD1_RS02170
location: 403860..404285
location: region:403860-404285:1
so has part: feature:403860-404285:1:exon

WP_096045767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403860-404285:1:exon

SJPD1_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rplA
locus tag: SJPD1_RS02175
old locus tag: SJPD1_0437
so part of: sequence
location: 404346..405050
location: region:404346-405050:1
so has part: feature:404346-405050:1:exon
subclass of: SO_0000010

position:404346:1
position: 404346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405050:1
position: 405050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404346-405050:1:exon

SJPD1_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rplA
locus tag: SJPD1_RS02175
old locus tag: SJPD1_0437
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002850119.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L1
translation: MAKKVNKRFQELLKKVDKEKKYSVADALGNIKNLASAKFDETIEIALKLNVDPRHADQMVRGSVVLPAGTGKTVRVAVIAKDEKADEARAAGADIVGSDDLIEEIQAGRINFDVLIATPNMMGLVGKVGRILGPKGIMPNPKTGTVTMDVAKAVENNKGGQVNFRVDKQGNIHAGIGKISFSSEQIRENFEAFIKAINKHKPASSKGKYIKCAALSLTMSPSMNLENQELIDLR
SIO_010081: SJPD1_RS02175
subclass of: SO_0000673
so part of: SJPD1_RS02175
location: 404346..405050
location: region:404346-405050:1
so has part: feature:404346-405050:1:exon

WP_087437691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404346-405050:1:exon

SJPD1_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rplJ
locus tag: SJPD1_RS02180
old locus tag: SJPD1_0438
so part of: sequence
location: 405245..405727
location: region:405245-405727:1
so has part: feature:405245-405727:1:exon
subclass of: SO_0000010

position:405245:1
position: 405245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405727:1
position: 405727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405245-405727:1:exon

SJPD1_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rplJ
locus tag: SJPD1_RS02180
old locus tag: SJPD1_0438
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002825125.1
GO component: GO:0015934 - large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L10
translation: MTRTEKAEFISSLTEEFKSSDGLIVCDYKGLNVKAIEALRNASRPEAVNVKVIKNTLASIAMTNAGIEGLELKDTNIFVWGADQLAVTKVVATFAKTNPNFIIKSGFAGGIVVDAAKVEALSKMPSRNELIGMLLSTWMAPITNFTIGLDALRAKKQESE
SIO_010081: SJPD1_RS02180
subclass of: SO_0000673
so part of: SJPD1_RS02180
location: 405245..405727
location: region:405245-405727:1
so has part: feature:405245-405727:1:exon

WP_096045768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405245-405727:1:exon

SJPD1_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rplL
locus tag: SJPD1_RS02185
old locus tag: SJPD1_0439
so part of: sequence
location: 405821..406195
location: region:405821-406195:1
so has part: feature:405821-406195:1:exon
subclass of: SO_0000010

position:405821:1
position: 405821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406195:1
position: 406195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405821-406195:1:exon

SJPD1_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rplL
locus tag: SJPD1_RS02185
old locus tag: SJPD1_0439
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002858569.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L7/L12
translation: MAISKQDVLEYISGLSVLELSELVKDFEEKFGVSAAPVMVAGAGAAVATEAAEEKTEFDVILKDGGEKKINAIKVVREITGLGLKEAKDAVEGAPTTVKEGVSKQVAEEIKKKLEEAGAVAEIK
SIO_010081: SJPD1_RS02185
subclass of: SO_0000673
so part of: SJPD1_RS02185
location: 405821..406195
location: region:405821-406195:1
so has part: feature:405821-406195:1:exon

WP_087437693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405821-406195:1:exon

SJPD1_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rpoB
locus tag: SJPD1_RS02190
old locus tag: SJPD1_0440
so part of: sequence
location: 406329..410486
location: region:406329-410486:1
so has part: feature:406329-410486:1:exon
subclass of: SO_0000010

position:406329:1
position: 406329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410486:1
position: 410486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406329-410486:1:exon

SJPD1_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rpoB
locus tag: SJPD1_RS02190
old locus tag: SJPD1_0440
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768588.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: MLNSLKSGNRLRVDFSKVPKKIDVPNLLQLQQKSYEQFLDVENFKEESGVEKVFKSIFPIHDPQNRLTLEYAGSEVGKPRYTVRECMERGLTYSVSLKMNIRLILWDKDEKSGEKTGVKDIKEQAIFIREIPLMTDRTSFVINGVERVVVNQLHRSPGVIFKEEESPTVANKLIYNAQIIPDRGSWLYFEYDAKDTLFVRINKRRKVPITILFRALGYSKQDILKLFYPVLNIMIRENKFLIEFSADNFLGRVDFDLKDEHGNLLLAAGKRLARKKAEKFIEDGIKFIEYPVEILVNRFLSSPIIDKESGEVLYDTLAQLDEGKLAKIIEQKCETIEIANDLASGVDDAIINSFIADNETLKLLRQTESIEDENDLAAIRIYKVMRPGEPVTKEAAKTFVKDLFFNSERYDLTKVGRMKMNHKLGLTVPEYVTIMTSEDIIKTAKYLIKVKNGQGHIDDRDHLGNRRIRAIGELLANELHAGLIKMQKAIRDKFTALSGSVEELMPHDLINSKMITSAIAEFFSSGQLSQFMDQTNPLSEITHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSMYAKVNDLGFVEAPYRKVENATITDEIIYITATQEEGLVIAPASTKINENNEIVEDLIEVRVDGETVLIEKEKVDLIDLSSMMIAGVAASLIPFLEHDDANRALMGSNMQRQAVPLVKSDAPIVGTGVEKIAARDSWEAIKVKRAGMVEKVDNKNVYILGEDEGGAFIDHYALQKNLRTNQNTTFTQKVIVRKGDMVEAGGVIADGPSMDQGELAIGKNAMVAFMPWNGYNYEDAIVISERMIREDAFTSVHIYEKEVEARELKDGVEEITKDIPNVKEEELAHLDDSGIVKVGTYVTPGMILVGKVSPKGEVKPTPEERLLRAIFGEKAGHVVNKSLYATPSLEGIVVDVKIFTKKGYDKDPRAVQAYEQEKEILDREHHDKLLMLDREEMLRINALLLKNPLQEDQEISKTSYKKGGFIKAEDLHNVNRFSINSIVKAFSNEVQDDYKDLKMYFQNEKKKLKEEHDEKLNIIEKDDILPSGVVKLVKVYVATKRKLKVGDKMAGRHGNKGIVSNIVREVDMPYLKNGEIVDIVLNPLGVPSRMNIGQILEVHLGLVGKRLGDQIEEIFKEKQGDWIKALREKMISIADVAKLMDARNFIDKINDEQLLIFARDWSKGVKFATPIFEGVNIEEFEKLFEMAKIDTDGKTDLYDGMTGQKMHERVNVGYMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLREMLTVKSDDVEGRILAYKALTRGENVPQTGIPETFYVLTNELKSLALDVEIYDEVEEDETTRTN
SIO_010081: SJPD1_RS02190
subclass of: SO_0000673
so part of: SJPD1_RS02190
location: 406329..410486
location: region:406329-410486:1
so has part: feature:406329-410486:1:exon

WP_096045769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406329-410486:1:exon

SJPD1_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rpoC
locus tag: SJPD1_RS02195
old locus tag: SJPD1_0441
so part of: sequence
location: 410464..414990
location: region:410464-414990:1
so has part: feature:410464-414990:1:exon
subclass of: SO_0000010

position:410464:1
position: 410464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414990:1
position: 414990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410464-414990:1:exon

SJPD1_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rpoC
locus tag: SJPD1_RS02195
old locus tag: SJPD1_0441
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768589.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MKRLEPIEIHEESRPRDFKAFQLRLASPEKIRSWSYGEVKKPETINYRTLKPERDGLFCAKIFGPVRDYECLCGKYKKMRYKGIKCEKCGVEVTSTKVRRSRMGHIELVTPVAHIWYVNSLPSRVGTLLGVKMKDLERVLYYEAYIVEQAGEAFYDAENKNKVAVYDVLNEEQYQSLQQRFEDTGFVAKMGGEVIRDLLANIDLVEVLGQLKEDINQTSSEAKKKTIVKRLKVVEAFLNSGNRPEWMMITMLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNARLKRLMELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPNLKMDQCGLPKQMALELFKPHLLARLEEKGYATTVKQAKKMIDMKTNEVWECLAEVVKGHPVMLNRAPTLHKLSIQAFHPVLIDGKAIRLHPLVCSAFNADFDGDQMAVHVPLSQEAIAECKILMLSSMNILLPASGKAVTVPTQDMVLGLYYLTLEKPHAKGSNKIFANVDEVHIAIDAGFLDIHAKIKTRINDRVLFTTAGRLILKSILPDFVPEAHWNRVLKKKNIGALVDFVFKEGGIGITAGFLDNIKRLGFKYATESGISVSIDDIRVPEAKVKKIKEAKKKVREIQKQFSSGLLTEQERYNKIIDIWTDTNNEVASEMMKLTESHKGGFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKLIDVAQNVKVTMDDCGTHEGVEITEISESGELVESLYERATGRVLAEDVIDTITNEVLFTEGTLIDEKSAQALKEASIKSVVIRTPITCKAKKGVCAKCYGTNLAEGTLVRPGEAVGIISAQSIGEPGTQLTLRTFHIGGTASTESQDRQVIAQKEGFIRYYNVKTYITKEGKNIVANRRNAAVLLVEPKIKAPFKGTIEIDTAHEETAITITSGSGENIRYTLRKSDFAKPNELAGVSGKIEGKFYIPYVSGDMVEVNESIVEVIKEGWNVPSRIPYASELKVKNGDPIIQKIHADAKGVVKYYKLHGDYLDRIHDIEKGHVVKEKGIFAVVADNDDREAIRHYIPRDSIIDINDNSIVEGKTLLAYPSTSEQITIAEWDPYSTPIIAEDAGTVTFEDIEPGISATEQFDDMTGQSRLVINEYLPSGMKPTIIIANKNGEIVKYQLEPKTAIFVQNGVTVGLADLIGRTPKAIAKSKDITGGLPRISELFEARRPKNATVIAEIDGTIRFGKPLRSKERIIIEAADGTSVEYLVDRNTQIHVQPGEFVHAGERLTDGVISSHDILRIMGEKALHYYLISEIQQVYRGQGVAINDKHIEVIVSQMLRQVRIVDSGDTKFIMGDLISRRRFREENEAVMKMGGEPAIAEPTLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKMDMLEDLKENVILGRMIPVGTGLYQNKQFNIELNPSRG
SIO_010081: SJPD1_RS02195
subclass of: SO_0000673
so part of: SJPD1_RS02195
location: 410464..414990
location: region:410464-414990:1
so has part: feature:410464-414990:1:exon

WP_096045770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410464-414990:1:exon

SJPD1_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rpsL
locus tag: SJPD1_RS02200
old locus tag: SJPD1_0442
so part of: sequence
location: 415075..415452
location: region:415075-415452:1
so has part: feature:415075-415452:1:exon
subclass of: SO_0000010

position:415075:1
position: 415075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415452:1
position: 415452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415075-415452:1:exon

SJPD1_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rpsL
locus tag: SJPD1_RS02200
old locus tag: SJPD1_0442
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856158.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MPTINQLVRNERKKVIKKSKSPALDKCPQRRGVCTRVYTTTPKKPNSALRKVAKVKLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDTSGVAKRTVSRSKYGTKRPKAK
SIO_010081: SJPD1_RS02200
subclass of: SO_0000673
so part of: SJPD1_RS02200
location: 415075..415452
location: region:415075-415452:1
so has part: feature:415075-415452:1:exon

WP_012856158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415075-415452:1:exon

SJPD1_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rpsG
locus tag: SJPD1_RS02205
old locus tag: SJPD1_0443
so part of: sequence
location: 415526..415996
location: region:415526-415996:1
so has part: feature:415526-415996:1:exon
subclass of: SO_0000010

position:415526:1
position: 415526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415996:1
position: 415996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415526-415996:1:exon

SJPD1_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rpsG
locus tag: SJPD1_RS02205
old locus tag: SJPD1_0443
inference: COORDINATES: similar to AA sequence:RefSeq:YP_002343926.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MRRRKAPVREVLPDPIYNSKIITKFINALMLDGKKSVATKVFYGSLELAEKRSGTLKGIEIFNTAIDNVKPVMEVKSRRVGGATYQVPVEVRTTRQQALALRWLVSYARKRSERTMVERLANELLDAANSRGATFKKKEDTYKMAEANKAFAHYRW
SIO_010081: SJPD1_RS02205
subclass of: SO_0000673
so part of: SJPD1_RS02205
location: 415526..415996
location: region:415526-415996:1
so has part: feature:415526-415996:1:exon

WP_096045771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415526-415996:1:exon

SJPD1_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: fusA
locus tag: SJPD1_RS02210
old locus tag: SJPD1_0444
so part of: sequence
location: 416072..418150
location: region:416072-418150:1
so has part: feature:416072-418150:1:exon
subclass of: SO_0000010

position:416072:1
position: 416072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418150:1
position: 418150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416072-418150:1:exon

SJPD1_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: fusA
locus tag: SJPD1_RS02210
old locus tag: SJPD1_0444
inference: COORDINATES: similar to AA sequence:RefSeq:YP_002343927.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MARNTPIEMVRNIGIAAHIDAGKTTTTERILFYTGISHKIGEVHDGAATMDWMEQEKERGITITSAATTCTWKDHQINIIDTPGHVDFTIEVERSMRVLDGAVAVFCAVGGVQPQSETVWRQANRYQVPRMVFVNKMDRVGADFYNVEAQIKNRLKANPVPIQIPIGAEENFKGVVDLVEMKALIWDDDAAMGSNYQVVEIPAELADKAKEYHERMVEAVSETSDELMEKYLGGEVLTKAEIKAGIKAGCLAMTFIPMICGTAFKNKGIQPMLDAVIDYMPAPTEVHAIKGEYEDGHECVVDSTDDGEFAALAFKIMTDPFVGQLTFVRVYRGSLESGSYAYNTTKDKKERIGRLLKMHANKREEIKVLHSGEIGAVVGLKDTLTGDTLASEKDPVILERMVFPDPVISVAVEPKTKADQEKMGIALQKLAQEDPSFRVETDEESGQTIISGMGELHLEILVDRMLREFKVSAEVGQPQVAYRETIRASVNQEYKYAKQSGGRGQYGHVFLKIEPQDAGSGYEFINDIKGGAIPKEFIPAVDKGIKEALGAGVLAGYKVEDVKVTLYDGSYHDVDSSEMAFKLAASMGFKEGCRKAKPVILEPIMKVEVETPEDFMGDVIGDLNRRRGQINSMDDRSGNKIVNAFCPLAEMFGYSTDLRSQTQGRASYSMEFDHYDEVPRNVAEEIIKKRNG
SIO_010081: SJPD1_RS02210
subclass of: SO_0000673
so part of: SJPD1_RS02210
location: 416072..418150
location: region:416072-418150:1
so has part: feature:416072-418150:1:exon

WP_096045772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416072-418150:1:exon

SJPD1_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02215
old locus tag: SJPD1_0445
so part of: sequence
location: 418223..418299
location: region:418223-418299:1
so has part: feature:418223-418299:1:exon
subclass of: SO_0000663

position:418223:1
position: 418223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418299:1
position: 418299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418223-418299:1:exon

SJPD1_RS02215
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1854492
locus tag: SJPD1_RS02215
old locus tag: SJPD1_0445
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:418257..418259,aa:Arg,seq:cct)
SIO_010081: SJPD1_RS02215
subclass of: SO_0000673
so part of: SJPD1_RS02215
location: 418223..418299
location: region:418223-418299:1
so has part: feature:418223-418299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418223-418299:1:exon

SJPD1_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02220
old locus tag: SJPD1_0446
so part of: sequence
location: 418371..418574
location: region:418371-418574:1
so has part: feature:418371-418574:1:exon
subclass of: SO_0000010

position:418371:1
position: 418371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418574:1
position: 418574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418371-418574:1:exon

SJPD1_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02220
old locus tag: SJPD1_0446
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MNFLHVKANLSEKSKRMIAIVIALLSVYIIWGSTYLGIKIAIETFPPLLMAGIRFILAGALLYGFVA
SIO_010081: SJPD1_RS02220
subclass of: SO_0000673
so part of: SJPD1_RS02220
location: 418371..418574
location: region:418371-418574:1
so has part: feature:418371-418574:1:exon

WP_096045773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418371-418574:1:exon

SJPD1_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02225
old locus tag: SJPD1_0447
so part of: sequence
location: 418556..419284
location: region:418556-419284:1
so has part: feature:418556-419284:1:exon
subclass of: SO_0000010

position:418556:1
position: 418556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419284:1
position: 419284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418556-419284:1:exon

SJPD1_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02225
old locus tag: SJPD1_0447
inference: COORDINATES: protein motif:HMM:NF013088.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MWFCSLEWRDTTIIGTLLLLGGNGFVVIAEQHIPSSIAAIIISTVPLWMIVIGWMMKIQTKPNKSTLIGTVLGFVGVAILMHPSHQENLHFDTGGLLFTLLAAILWSLGSIYSQKAILPSSTMLSTAMQMLTGGAVLVIVGTLTGEWYHLNPAAFSSRSLMALLYLIFVGSLLGFSAYVWLLKNVSPYLASTYAFVNPIVALFLGYFFADEVMSIKSLIATVLIISAVIMITLFKAKGRSKR
SIO_010081: SJPD1_RS02225
subclass of: SO_0000673
so part of: SJPD1_RS02225
location: 418556..419284
location: region:418556-419284:1
so has part: feature:418556-419284:1:exon

WP_226372276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418556-419284:1:exon

SJPD1_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02230
old locus tag: SJPD1_0448
so part of: sequence
location: complement(419509..420345)
location: region:419509-420345:-1
so has part: feature:419509-420345:-1:exon
subclass of: SO_0000010

position:419509:-1
position: 419509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420345:-1
position: 420345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419509-420345:-1:exon

SJPD1_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02230
old locus tag: SJPD1_0448
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013460510.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldo/keto reductase
translation: MNYVTSNQNVSIPCMLYGTAWKKERTADLVALALQSGFRGIDTACQPKHYEEALVGEGCERFYAKGGTREELYLQTKFTPYDGQDPLKIPYDPHTSLEEQIITSCEMSKHNLQTSYLDSLLLHSPLFPYNNLLKAWNVFESLFEEGEVRQIGISNCYDLSLLQTFYEHVRIKPSVVQNRFYADVHYDKTLRSWANEKGIIYQSFWTLSANPHILHSPPMREIVNIYGKSAEQIFYRYVIQKGIVPLNGTTSALHMKEDLSIFEFSLDEKDVERIDALL
SIO_010081: SJPD1_RS02230
subclass of: SO_0000673
so part of: SJPD1_RS02230
location: complement(419509..420345)
location: region:419509-420345:-1
so has part: feature:419509-420345:-1:exon

WP_096045775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419509-420345:-1:exon

SJPD1_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02235
old locus tag: SJPD1_0449
so part of: sequence
location: 420468..421736
location: region:420468-421736:1
so has part: feature:420468-421736:1:exon
subclass of: SO_0000010

position:420468:1
position: 420468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421736:1
position: 421736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420468-421736:1:exon

SJPD1_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02235
old locus tag: SJPD1_0449
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768595.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SagB family peptide dehydrogenase
translation: MLAYHAQTVHSYRSVRTKSHSIDWDHPPQQFKIYPETFTRIPLDKKNPDHRFFYLIGGITAQKSYPGVTYALRTNPSAGALYPTEVYVQIRDVEGFKDGIYHLSPRETSLVLLYPLSEPEGVESFLHVKKIKGFVFLFSALYYRSSWKYKDRAFRYCLHDTGHMIGTLEASCTLSAAVYHLLYGIEKKALNKLFEFGKEEFFLSAAIVGEEDESFTCKEVSMHLPYVNGTGNFEVNECVEKAYDETCELILHAQTTLPLFDLDKERFTQAIWKRRSIRDFMQKPIAKDEFLEVMEFITQPIPSDCDVGIEIYAIINRVEGMWQGVWKEGVYLQSGDFMRKAGYLCLEQALGAESGVTFFLVGHDEQNYQAMVQKAGIIGHRLYLISTYLGFGCSGIGAYYDEEVMTFLQSDGMVLYSLAIGH
SIO_010081: SJPD1_RS02235
subclass of: SO_0000673
so part of: SJPD1_RS02235
location: 420468..421736
location: region:420468-421736:1
so has part: feature:420468-421736:1:exon

WP_096045776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420468-421736:1:exon

SJPD1_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02240
old locus tag: SJPD1_0450
so part of: sequence
location: 421895..423358
location: region:421895-423358:1
so has part: feature:421895-423358:1:exon
subclass of: SO_0000010

position:421895:1
position: 421895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423358:1
position: 423358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421895-423358:1:exon

SJPD1_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02240
old locus tag: SJPD1_0450
inference: COORDINATES: protein motif:HMM:NF013132.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anion permease
translation: MASIATYRWTAFLPIVVTLLIALFPTPSGLEQHAWYFFAIFAGTIAALVMESFPFAATGLMGATIVTVLAPWVLFGTQELANPKFKAPEQAIKWMLTGWSSTTVWLVFSAFTFALGYEKSGLGRRIALILVKLMGRRTLLLGYAVMLSDALVAPFTSSNTARSGGIVFPIVRNLPPLYDSKPNDPSARKIGGYVMWVAFATTGVTSSMFLTALAPNLLCVEIIKKIAKVDISWTDWFFAAAPFGIAMLLLLPLLVYWIYPPEIKEGDAVPKWAASELEKMGKITLNEILLAIIVFTAILFWILGAKIINATTVALVAVSFMMLFKIVKWDDIAGNKTAWNTIVLLAFLVSMAEGLSRTGFIHWFDNGIAAYMQGFSPIVAMYVLVATYFFSHYMFASTTPHATAMMPVMLAVGMSVPGMPIKEFALLLAMTHGIMGVITPYATGPAPLYYGAGYITGKDFWKLGFIFGVIFITALLGLSAPVMLAMR
SIO_010081: SJPD1_RS02240
subclass of: SO_0000673
so part of: SJPD1_RS02240
location: 421895..423358
location: region:421895-423358:1
so has part: feature:421895-423358:1:exon

WP_096045777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421895-423358:1:exon

SJPD1_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02245
old locus tag: SJPD1_0451
so part of: sequence
location: complement(423413..424750)
location: region:423413-424750:-1
so has part: feature:423413-424750:-1:exon
subclass of: SO_0000010

position:423413:-1
position: 423413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424750:-1
position: 424750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423413-424750:-1:exon

SJPD1_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02245
old locus tag: SJPD1_0451
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768596.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO process: GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MDSTSLTHNPIPLLLRQLSIPASLGMLFNTLYNIVDTYYAGLISTEALAALSASSFLFFFVIGMAYGGTSALTALIGHAYGKQHFFLAGIIAKKGVTLILGVGMFFGLLGFYFASELLTWIGTEERYHALALSFIEVILLGAALFFANFALNSVLVATGDTKSYRNTLIFGFFANIVLNPLFIYGWGFIPAMGIGGIALSTVLVQAFGASYLLYKSLQTGLISFTCKEHFYPDMRIYKDLISQATPPGLNMLMMSFGSLIALHFVTLYGYQAVAGYGIGYRVEQLMLLPTLGISSAVLSLVSNNMGAGKFERVRQTLFYALTYGYTLSIIGMGILWISGKWLVAQFDPSADVIAYGTTYIYVMLFLFCGYVTHFACVATLQGIKKPTMIFYVGFFRQILAPSIVYTFIVSYFELSFIWMWIGLGCIVYSSALALLYYTYLKVKAL
SIO_010081: SJPD1_RS02245
subclass of: SO_0000673
so part of: SJPD1_RS02245
location: complement(423413..424750)
location: region:423413-424750:-1
so has part: feature:423413-424750:-1:exon

WP_096045778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423413-424750:-1:exon

SJPD1_RS14615
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS14615
old locus tag: SJPD1_0452
so part of: sequence
location: 425039..425317
location: region:425039-425317:1
so has part: feature:425039-425317:1:exon
subclass of: SO_0000010

position:425039:1
position: 425039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425317:1
position: 425317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425039-425317:1:exon

SJPD1_RS14615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS14615
old locus tag: SJPD1_0452
inference: COORDINATES: protein motif:HMM:NF021997.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin-arginine translocation signal domain-containing protein
translation: MTKKMDRRSFLKVGGGVAAVATMNANAIPLVGDGLLNDSEDGFSASHFGAVITHSRNSRFESATPFEGDAHPVTLIEGLYIRNGSHYVSLCT
SIO_010081: SJPD1_RS14615
subclass of: SO_0000673
so part of: SJPD1_RS14615
location: 425039..425317
location: region:425039-425317:1
so has part: feature:425039-425317:1:exon

WP_226372228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425039-425317:1:exon

SJPD1_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02250
old locus tag: SJPD1_0453
so part of: sequence
location: 425298..427571
location: region:425298-427571:1
so has part: feature:425298-427571:1:exon
subclass of: SO_0000010

position:425298:1
position: 425298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427571:1
position: 427571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425298-427571:1:exon

SJPD1_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02250
old locus tag: SJPD1_0453
inference: COORDINATES: protein motif:HMM:NF012602.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MYPCVRESYLKNGYKSDKTKRGSDKFVRVSWEKAYDLIANELKRVYKDHGSDAVFGGSYGWFCVGSLNNPQALVGRMLGIAGGYTSRTCTYSTHAIRQITPYITGTDESTAPVTVYPVIIENSECIVFWGADPINTNQIAWGVPDHQSYMYMKELKEAAKKRNIKFYIIDPVYNNTGLYFGAEHIQIRPTTDVALMLGIANYLYTENLYDKDFVHKYTIGFDEFEKYLVGESEDMVAKTPEWASKICGVDANVIKMLAKEFVSKRTMLMGGWGTQRAHHGEQPNWMMITLASMIGQVGLPGGGYGMSYHYSDGGVPMPAAASGNALSEKPINGSVGAVADTENVAASPGLSGISINSKMDGPWKQRKINVIPVSRIVECLENPGKEYNFDGKAYKYPEIKMAYWAGGNPFHHHQDRNRMVKAWQKLDTFVVNECFWTATARMADIVLPATTEQERNDISKSHSNSYIFAMKQAVKPAGEAMDDFDIFVNILRRFGANEVLAFTEGKTKMEWVEAFYAESYDKAIKSGVKMLPFKEFWEKGFVKFETPESAKKFVKHAKFRQNPVINRLGTPSGKIEIFSKKIAGYNYKECKGHPMWFEPMEWLGSKVAKEFPLNLVSPHPKYRLHSQLNNTWLRDLEEVEGREPIWMHPKDAAKRGIQNGDIVRVFNKRGQVLAGAVVTEAVMQGVVRMQEGAWYDPAEPGKVGTLCRHGDVNVLIPDVGTSELAQGNQATALVEIEKFKGEVPDIGIFKAPKIKGV
SIO_010081: SJPD1_RS02250
subclass of: SO_0000673
so part of: SJPD1_RS02250
location: 425298..427571
location: region:425298-427571:1
so has part: feature:425298-427571:1:exon

WP_226372229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425298-427571:1:exon

SJPD1_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02255
old locus tag: SJPD1_0454
so part of: sequence
location: 427571..428134
location: region:427571-428134:1
so has part: feature:427571-428134:1:exon
subclass of: SO_0000010

position:428134:1
position: 428134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427571-428134:1:exon

SJPD1_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02255
old locus tag: SJPD1_0454
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIMKFLAPLCAATMMFAAGNSFLSKNAQLFSDAKEGSALGELVVSSAVKELSKSGDFTEVEFVGFMPEGSTIAYEKTGVLMIGFEATKASVYKVIGQTKDEYDTVWLNVSVKGFVKSDALGNDKSKILGEGKTLFQAKCSTCHALHAEDEFEPNVWPSILEAMGQQAGLSKAEKFSIEKYLQNFTK
SIO_010081: SJPD1_RS02255
subclass of: SO_0000673
so part of: SJPD1_RS02255
location: 427571..428134
location: region:427571-428134:1
so has part: feature:427571-428134:1:exon

WP_096045779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427571-428134:1:exon

SJPD1_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02260
old locus tag: SJPD1_0455
so part of: sequence
location: 428255..428941
location: region:428255-428941:1
so has part: feature:428255-428941:1:exon
subclass of: SO_0000010

position:428255:1
position: 428255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428941:1
position: 428941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428255-428941:1:exon

SJPD1_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02260
old locus tag: SJPD1_0455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011139280.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MELWLEKLKSLRLLYAEDEEGIRKPMANTLSYYLKEVLEARNGEEGLDIYYEQRPDIILTDLRMPKKDGLYMVKEIRKSDKKTPILMITAHTDKEYLLSAIELKIEKYLIKPIALDELLGALKLCISEIELGRSLFLECKNCQFDFNNKRIVHSDGSEVELTHKESDFLELLLRKKGMIVSYEEIEINVWKEEYMSIAALRTLVKSLRKKLPNSFIRNHSQTGYSFEV
SIO_010081: SJPD1_RS02260
subclass of: SO_0000673
so part of: SJPD1_RS02260
location: 428255..428941
location: region:428255-428941:1
so has part: feature:428255-428941:1:exon

WP_096045780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428255-428941:1:exon

SJPD1_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02265
old locus tag: SJPD1_0456
so part of: sequence
location: 428931..430526
location: region:428931-430526:1
so has part: feature:428931-430526:1:exon
subclass of: SO_0000010

position:428931:1
position: 428931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430526:1
position: 430526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428931-430526:1:exon

SJPD1_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02265
old locus tag: SJPD1_0456
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011139281.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MRFKQFFALLIVLGTLCVYAVETEYHEDSSAQRALHVKDPRSHIKIFLPAMPYVSVARLINEGLVRLADNEQGWEYSLATQCLKKTPLLYECDLRQGVKFQDGTAFNADAVINNFHYFMAQPINYTDINHRLKGVEKLSDYKIKIELYKPYGMLFRDLARINFYTEAYLKKFAWRGAATGPNIEEAGPYGLGPYVLVEGVITGRKQTPKVILKANPYYWEKGFPKIETITLYTQLETDKALKMMTEHEGELDFMPIPFNKKIETMLSAYSKLVILPSTNNFALYFNLIKKDSPVYDKKVRQALNCALNQYNLLTFTYKQEGSLNREALRVNECPLNHEEISEALNNKHFKIVTQDSLLFLWKGIEYQLSQYNVTLHYTITSDEKMVYDFLLSNNETVQDWDILSQNTIDWYGRHPWLIFFNYQEGNPWSFVRGDKIMQSYISDFFGLEQNTPEFNVLCEKIRQRAKEEAYMLFVPTPNNVFAMNKELVFEPLGIGMQPFWKANITDQHWSIRGDKPYPKELQVPIFPKRLP
SIO_010081: SJPD1_RS02265
subclass of: SO_0000673
so part of: SJPD1_RS02265
location: 428931..430526
location: region:428931-430526:1
so has part: feature:428931-430526:1:exon

WP_096045781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428931-430526:1:exon

SJPD1_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02270
old locus tag: SJPD1_0457
so part of: sequence
location: 430523..432202
location: region:430523-432202:1
so has part: feature:430523-432202:1:exon
subclass of: SO_0000010

position:430523:1
position: 430523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432202:1
position: 432202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430523-432202:1:exon

SJPD1_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02270
old locus tag: SJPD1_0457
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011139282.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MKKIQIKYKLFLLFSVSFIGMLILAERSFKLSQENISNATTIFENSQSTQHLQENYIEPINALREMSLSLVMSPNEDYRKTIEVDIMKQKERLEENFLKLDSKTYDFWKAYASSVEKTCGYLAAHFEEGAFVYVNSIERDHYYALLNRLKALQHDAVNQAEHNFADIQTSAQALKYELAILILALSSLVFTVGYLLSNHIVSSILKLQEGLKDFFGYLETKSVSPKPIELTSRDELEDMSQLLNRSIAKASANIEQDIVFVEDAISVVNDLKMGKLSSRLHATAQAQELQLLKDVVNAMIDNLESKINEEIFKRSEQEKLLIQQSKLASMGEMIGNIAHQWRQPLGEMSALLINLQVKHEFNDLDDAYMLTSIQQCVKINAFMSGTISDFQNFFKPSKEKEVFEISEACERAISILQASLKYHGIEFSFDISEKMEVLGYPNEFAQALLNILSNAKDVLSEREISNPFIRLYLKKGYKYILIVIEDNGGGIAREHMDRIFEPYFTTKYAKQGTGIGLYMTKMIIENNMGGVINVKNTESGALFTIKLPSVMDADTVDLA
SIO_010081: SJPD1_RS02270
subclass of: SO_0000673
so part of: SJPD1_RS02270
location: 430523..432202
location: region:430523-432202:1
so has part: feature:430523-432202:1:exon

WP_096045782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430523-432202:1:exon

SJPD1_RS14870
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS14870
old locus tag: SJPD1_0458
so part of: sequence
location: complement(432246..433697)
location: region:432246-433697:-1
so has part: feature:432246-433697:-1:exon
subclass of: SO_0000010

position:432246:-1
position: 432246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433697:-1
position: 433697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432246-433697:-1:exon

SJPD1_RS14870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS14870
old locus tag: SJPD1_0458
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856170.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MMPSSSLMNRSSLAKIQDANLISLVIFFIAFCLEVTVNGFHWIQIINLCNFGLGWFMFINIRKVQKTIHALADIVKESEHGNLHGRIVNVNDGGELKLLCSNMNSLLDNFELVTKEIKSTILAASKEDFSRKILQKGMHGEFREQTNMVNQSVRAMQQTHEFIARNTLNAELAQISSGSHDFSTVQSNLSTIVERLKEIAHDGEIYADETKGSYQNLRDTIAKITSLVEFVNQNEQSIGVLAQRTRDISNVVDMINDIADKTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAETTQKATAEIAVSIKMLQQETSGLETNAEAMKSDADASTKTLDKLSTTFNSLISHSNTTSININTIQQTIFITLAKMNHAIFKSNAYSAVYVNDKDVVFQNHETCSLGEWYHHDGEKIFGETKSFKELYKPHQNFHNHVLEVAKLIRATSSNLLDEKVQIINYFKEIENESKTLFVTLDAMIAEKNTKA
SIO_010081: SJPD1_RS14870
subclass of: SO_0000673
so part of: SJPD1_RS14870
location: complement(432246..433697)
location: region:432246-433697:-1
so has part: feature:432246-433697:-1:exon

WP_096045783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432246-433697:-1:exon

SJPD1_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02280
old locus tag: SJPD1_0459
so part of: sequence
location: complement(433669..434175)
location: region:433669-434175:-1
so has part: feature:433669-434175:-1:exon
subclass of: SO_0000010

position:433669:-1
position: 433669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434175:-1
position: 434175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433669-434175:-1:exon

SJPD1_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02280
old locus tag: SJPD1_0459
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856171.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MSITQKGEELHFDENLFIVSKTDLKGRITYANDLFIEISGYKEQELIGMPHNILRHPDMPKAIFKLLWDRVQAGNEVFAYVKNRTKNNYYYWVHAYITPVTDTKTNQIIGYHSVRRAPSPKGLEVIIPLYKRMLDAEQTGGVQASRALLDTTLSQLKVSYDAFILSYE
SIO_010081: SJPD1_RS02280
subclass of: SO_0000673
so part of: SJPD1_RS02280
location: complement(433669..434175)
location: region:433669-434175:-1
so has part: feature:433669-434175:-1:exon

WP_096045784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433669-434175:-1:exon

SJPD1_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02285
old locus tag: SJPD1_0460
so part of: sequence
location: complement(434315..434791)
location: region:434315-434791:-1
so has part: feature:434315-434791:-1:exon
subclass of: SO_0000010

position:434315:-1
position: 434315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434791:-1
position: 434791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434315-434791:-1:exon

SJPD1_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02285
old locus tag: SJPD1_0460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856172.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSPRFLKFLAVEILAVVLIAAYVLIDAKDVYQWWVGETNFVSTDPACDLHQSACEVTLSDGSLLRLDIEPKSIPLMKPLHFKVTTPSDLPTIEIKLFATNMNMGLHTIKLTKTTTGIFEGEGMLPTCIMGNMIWQANVILNQNRHSLGAVFSFKTDK
SIO_010081: SJPD1_RS02285
subclass of: SO_0000673
so part of: SJPD1_RS02285
location: complement(434315..434791)
location: region:434315-434791:-1
so has part: feature:434315-434791:-1:exon

WP_096045785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434315-434791:-1:exon

SJPD1_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02290
old locus tag: SJPD1_0461
so part of: sequence
location: 435036..436550
location: region:435036-436550:1
so has part: feature:435036-436550:1:exon
subclass of: SO_0000010

position:435036:1
position: 435036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436550:1
position: 436550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435036-436550:1:exon

SJPD1_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02290
old locus tag: SJPD1_0461
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768601.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2Fe-2S iron-sulfur cluster-binding protein
translation: MAHITVDGTVLEVKEGTLLIEELLANKINIPHFCYHPALGKDGNCRMCMVEIEGQKRPQIACDTPIKDGMIVRTKGASIDRVKRSILELELINHPIDCPICDQAGECSLQNYYMDVGLYESRLSTPKTRGEKHVDLGANVVLDQERCVLCTRCVRFTKNITKTNELGVLSRADHSVITTFPGSKLSNPYAMNVVDLCPVGALTSQDFRFHKRVWFLHSEEAICNHCARGCSIFVDHHKEKYKDEMVYRYRPRFNEKINGYFICDAGRLSYTNENENADFSPLIRGMVSEYEYAEGKLLRLLKRYLGKMVFVISSNLSLEEMVRVQKLSKLYDGTLCAYEEARFDTSFGDDFLKCNDRSANARALPLLGIDDSKEALQNALLCAELVVMVGRSDAKLLKSMEYTKSVVVLCSACEFTCKEVELVLPIASHTKRAGSFINVDGYVQYSASAIKNEHGHKSLLAILAPILGDTLFTCKEVWEAELFFYEVLRDLTFDSLKHTPKITL
SIO_010081: SJPD1_RS02290
subclass of: SO_0000673
so part of: SJPD1_RS02290
location: 435036..436550
location: region:435036-436550:1
so has part: feature:435036-436550:1:exon

WP_096045786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435036-436550:1:exon

SJPD1_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02295
old locus tag: SJPD1_0462
so part of: sequence
location: 436547..437830
location: region:436547-437830:1
so has part: feature:436547-437830:1:exon
subclass of: SO_0000010

position:436547:1
position: 436547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437830:1
position: 437830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436547-437830:1:exon

SJPD1_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02295
old locus tag: SJPD1_0462
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768602.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit H
translation: MSHLSISIVIINIILALLFSLGAAPILVWIERRVAGLIQDRLGPNRCHINGIRLGGLIQSFADMLKLVFKEDFQAKAIKEHFFFSLAPVIVFASAFLSFMVMPFADDLVINGERFIMQGLPMDLGILWFLAFAGLSVYGIMLGGWSSRNKYSLLGAMRAGAQVISYEAAMGLSVVSLLITYGSVHLGQIVAYQGELLFGFIPAWGIIVQPLAALIFIVTAFAEANRTPFDLAEGESEIVGGYHTEYSAMRFGLFFVGEYVAMSASSALIVTLFLGGYHLPYLNTQTLQAFMPWILMFVIIALPLASFYVMRWIKKHNRWHKAGDVRNRESAFLRKGLIGVNVLFIAGLGALLFVGLTQTSTNVATAVIQIATFAFKLLLMNFVFVWVRWTLPRFRYDQLQTLGWKVLMPLAIFNIIVTATIVVIKGL
SIO_010081: SJPD1_RS02295
subclass of: SO_0000673
so part of: SJPD1_RS02295
location: 436547..437830
location: region:436547-437830:1
so has part: feature:436547-437830:1:exon

WP_096045787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436547-437830:1:exon

SJPD1_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02300
old locus tag: SJPD1_0463
so part of: sequence
location: 437832..438326
location: region:437832-438326:1
so has part: feature:437832-438326:1:exon
subclass of: SO_0000010

position:437832:1
position: 437832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438326:1
position: 438326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437832-438326:1:exon

SJPD1_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02300
old locus tag: SJPD1_0463
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768603.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit I
translation: MGIKIVTRHGNTLKEKLYIPAIFGGMKTTLSHFITNLSDHPEIKTINYPEELPHDISERYRGVHRLTKRDDGSVRCVACFMCATACPAECIFIEAEERMDGVDEKMPKRFDIDLLECVFCGACVEACPCDAIRMDSGIFSFIGQKREEFVLTKEQLLANEEKKQ
SIO_010081: SJPD1_RS02300
subclass of: SO_0000673
so part of: SJPD1_RS02300
location: 437832..438326
location: region:437832-438326:1
so has part: feature:437832-438326:1:exon

WP_096045788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437832-438326:1:exon

SJPD1_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02305
old locus tag: SJPD1_0464
so part of: sequence
location: 438323..438820
location: region:438323-438820:1
so has part: feature:438323-438820:1:exon
subclass of: SO_0000010

position:438323:1
position: 438323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438820:1
position: 438820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438323-438820:1:exon

SJPD1_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02305
old locus tag: SJPD1_0464
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004510364.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit J
translation: MMDILFLLLSSFAILGAVGMVSFHQPVHSALSLILTIMALAGLFALLSASFLFMVQIIIYAGAILTLFIFIIMFLNVKEANLPKEPNKAMTLFLGSLALLPLNFLILRAFYKMPLHVNPVASDFGKIKPLGMELFTHWLLPFELISILLLVALIGAVVLGRKDEA
SIO_010081: SJPD1_RS02305
subclass of: SO_0000673
so part of: SJPD1_RS02305
location: 438323..438820
location: region:438323-438820:1
so has part: feature:438323-438820:1:exon

WP_096045789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438323-438820:1:exon

SJPD1_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nuoK
locus tag: SJPD1_RS02310
old locus tag: SJPD1_0465
so part of: sequence
location: 438817..439137
location: region:438817-439137:1
so has part: feature:438817-439137:1:exon
subclass of: SO_0000010

position:438817:1
position: 438817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439137:1
position: 439137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438817-439137:1:exon

SJPD1_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nuoK
locus tag: SJPD1_RS02310
old locus tag: SJPD1_0465
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014473163.1
GO function: GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO process: GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoK
translation: MIAHTLFAYIFVAMILFSIGLLGVISRKNIFVIYMSIELMLNAVNLMFVALSHYHHDMGGQVMAMMVIAIAAAEAGVFLSLIVVLYRRKKSLDSDLFRTLSQKEVA
SIO_010081: SJPD1_RS02310
subclass of: SO_0000673
so part of: SJPD1_RS02310
location: 438817..439137
location: region:438817-439137:1
so has part: feature:438817-439137:1:exon

WP_096045790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438817-439137:1:exon

SJPD1_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nuoL
locus tag: SJPD1_RS02315
pseudo: true
so part of: sequence
location: 439134..441019
location: region:439134-441019:1
so has part: feature:439134-441019:1:exon
subclass of: SO_0000010

position:439134:1
position: 439134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441019:1
position: 441019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439134-441019:1:exon

SJPD1_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nuoL
locus tag: SJPD1_RS02315
inference: COORDINATES: protein motif:HMM:NF012581.2
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO process: GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit L
SIO_010081: SJPD1_RS02315
subclass of: SO_0000673
so part of: SJPD1_RS02315
location: 439134..441019
location: region:439134-441019:1
so has part: feature:439134-441019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439134-441019:1:exon

SJPD1_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02320
old locus tag: SJPD1_0468
so part of: sequence
location: 441023..442504
location: region:441023-442504:1
so has part: feature:441023-442504:1:exon
subclass of: SO_0000010

position:441023:1
position: 441023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442504:1
position: 442504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441023-442504:1:exon

SJPD1_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02320
old locus tag: SJPD1_0468
EC number: 1.6.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013136457.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit M
translation: MSIGILSIIIFLPMLTALILMVVPLHSRATRNVAFGVSLCIFALALYVYTHFDLTGALQFQESYVWIKSYGITYSVGIDGFSLIILMLIATLIPSAYLLLWNNSRSKSYWINMLFIQAGVSGTLFSLDLFLFYFFWEAMLLPVFMIIGLFGSGNRVFSTLKITIYTIMGSLFMFVSILYLGVAHYYEFGVWSFALSDLVNISTLAREQKILLFFGFMLAFAIKIPLFPFHSWLLQTYSNSPTGGVFLLSSIMAKLGVYALVRFMMPLFPDLFVEFSIYFVALGLFGLVYFGIAAISQLNIKKMFAYSSASHLGFITAGVFALNIQGMMGSAFLIVAHAIATGGLFLLVGVMERHLGIRSLNGLGGIATKAPWFTLFFAIMLFCTVGIPGTNGFVAELLIVLGIFHYNPYLGMLSALTVLVAASYMFWVFQKAVLVKSDNDVSNMKDLRFHEILGLAPLAVLILAMGVYPDLFLYKIEPTLQHYLIDILHVGVK
SIO_010081: SJPD1_RS02320
subclass of: SO_0000673
so part of: SJPD1_RS02320
location: 441023..442504
location: region:441023-442504:1
so has part: feature:441023-442504:1:exon

WP_096045791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441023-442504:1:exon

SJPD1_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02325
old locus tag: SJPD1_0469
so part of: sequence
location: 442504..444009
location: region:442504-444009:1
so has part: feature:442504-444009:1:exon
subclass of: SO_0000010

position:444009:1
position: 444009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442504-444009:1:exon

SJPD1_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02325
old locus tag: SJPD1_0469
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit N
translation: MHWIELSYLLPLIIIASGAIVLMLLSPLERFSMERFSLFTFLVLLMALSADLYYFGDLFTAFPLQNIFSKMLIVDSYSVYFDALILSGALVTALIGTHYFQAKRHFKKEFFSLFLFSVFGMMLLVHANELITAFIALEIASLSLYVMIGFQKIHDKRVEASYQYLVLGSISGAFFLLGSVLIYAGLGTTILGDLGKALDILMGKDVSLIVIGGTFILVTFLFKISAFPFQNWTIDVYDGSPLPVTAFMAATFKVAIFGFVLRLMLIDLDPIRDMWDTLFVVVILATLLYGTFLAIIQESLKRMLAASSIVHTGYLLIAFVSIGYAGESASSSIIFYLVAYFLSAMGAFGLISYIAADEHVRVTYEDFRGFAHVHPYMAAMLSIFMLSLAGIPSTIGFVGKFYIFTGAIEAGYTFLAVCGIIATFISIYYYFKLIALMYFYPACEKEGAQIPTLSGITPITIGVIAIAVIWGGIGNTFIAYFPGVDFLIDTARLSYMSLFIK
SIO_010081: SJPD1_RS02325
subclass of: SO_0000673
so part of: SJPD1_RS02325
location: 442504..444009
location: region:442504-444009:1
so has part: feature:442504-444009:1:exon

WP_096045792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442504-444009:1:exon

SJPD1_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02330
old locus tag: SJPD1_0470
so part of: sequence
location: complement(444014..444808)
location: region:444014-444808:-1
so has part: feature:444014-444808:-1:exon
subclass of: SO_0000010

position:444014:-1
position: 444014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444808:-1
position: 444808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444014-444808:-1:exon

SJPD1_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02330
old locus tag: SJPD1_0470
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:TIGR00254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MTGYHLGEALGHTPHELVGSGKQEKIFYTHMWETILSNQPWHGEVINKRKNGQLYYESLQITPVSDDHGNITHFIAIKEDISDRKRAEEEMEHLAFYDPLTDLPNRRLLMDRIERAIVSAKRYQTFGAIFFLDLDYFKRINDELGHDVGDLLLQDMARRLQNSLRQGDSIARLGGDEFVILLEDLGDTKTFATQYMKALAQKVQDAFIDPFIYNEKSYSLSISLGGILFTGTQDAKIILKNADSALYEAKQTGRHKSCFYNENT
SIO_010081: SJPD1_RS02330
subclass of: SO_0000673
so part of: SJPD1_RS02330
location: complement(444014..444808)
location: region:444014-444808:-1
so has part: feature:444014-444808:-1:exon

WP_226372278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444014-444808:-1:exon

SJPD1_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02335
old locus tag: SJPD1_0471
so part of: sequence
location: complement(444812..446026)
location: region:444812-446026:-1
so has part: feature:444812-446026:-1:exon
subclass of: SO_0000010

position:444812:-1
position: 444812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446026:-1
position: 446026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444812-446026:-1:exon

SJPD1_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02335
old locus tag: SJPD1_0471
inference: COORDINATES: protein motif:HMM:TIGR00229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain S-box protein
translation: MKRIFISIWAHLSFAHRIFIAISFSLLFAGGLILIMLTKQDAKDALHDLEMQKEQTLKMLPIFLSESIVIGDYETIQQQLNGYVTSPYVQNIVFYDAKGKSLQSSDADEPKDTPQWFETLFGLCDSYGQTHISIGGIDYGSIAVRLSIQSFSNRIWNDFRVHFGVMFAIILLDFLGLWLTLYRSLEQLSALEQSTIDLGNGYFAPIQLQGGLRETAKVVNAFNLMIEKVKTTQKELQDTSDEMKQRKHWIETIINSLDEGVYAVDLEGIILLVNAKACSILGYTEEEMIGKQAHRLFHSHTLNGAIIPLEECPMYKALVTKSAWKNDTEYFTCKDSRMIPVEIFGNSIVYENQALGMVFAFRDIGERKALEEKMKLLSTALEATTNAVVITNKDAIIEWVSKGF
SIO_010081: SJPD1_RS02335
subclass of: SO_0000673
so part of: SJPD1_RS02335
location: complement(444812..446026)
location: region:444812-446026:-1
so has part: feature:444812-446026:-1:exon

WP_096045794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444812-446026:-1:exon

SJPD1_RS14630
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS14630
pseudo: true
so part of: sequence
location: complement(446023..446843)
location: region:446023-446843:-1
so has part: feature:446023-446843:-1:exon
subclass of: SO_0000010

position:446023:-1
position: 446023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446843:-1
position: 446843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446023-446843:-1:exon

SJPD1_RS14630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS14630
inference: COORDINATES: protein motif:HMM:NF024376.2
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
SIO_010081: SJPD1_RS14630
subclass of: SO_0000673
so part of: SJPD1_RS14630
location: complement(446023..446843)
location: region:446023-446843:-1
so has part: feature:446023-446843:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446023-446843:-1:exon

SJPD1_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nuoF
locus tag: SJPD1_RS02350
old locus tag: SJPD1_0474
so part of: sequence
location: complement(446979..448223)
location: region:446979-448223:-1
so has part: feature:446979-448223:-1:exon
subclass of: SO_0000010

position:446979:-1
position: 446979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448223:-1
position: 448223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446979-448223:-1:exon

SJPD1_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nuoF
locus tag: SJPD1_RS02350
old locus tag: SJPD1_0474
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768609.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoF
translation: MMVKLVSKNFDIPEAYTLCVARENGRYASLEKLFKMSPDEVTTEVEKSGLRGKGGGGAHTGDKWRLIPKNGDKPVYLVINADEGEPGTFKDRQILEFDPHLLIEGIICSSYAIGAHHAYVYIRGEYVFWMNRLQEAINEAYEAGILGETILGNNYALHVTIHKGAGAYICGEKTALLESLEGKRGHPRLKPKGKEPEWFFGNPTVVNNVETIASVPYIINEGYGAYQMYGTKESPGTMLFGVSGHVEHPGVYELPYGTSMKEVIYDLCGGIKNGKKLKAIIPGGSSVQILKADEIDDITLDYENLKAHGSALGTGGIIVMDEDVSIPEVMKNLFEFYHHESCGQCTPCREGTGWVDRILAKILAGKGTKEDFDTILDACDMLNGKTICVFAPSVAFIAQSYLKKFREEFEALLH
SIO_010081: SJPD1_RS02350
subclass of: SO_0000673
so part of: SJPD1_RS02350
location: complement(446979..448223)
location: region:446979-448223:-1
so has part: feature:446979-448223:-1:exon

WP_096045797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446979-448223:-1:exon

SJPD1_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02355
old locus tag: SJPD1_0475
so part of: sequence
location: complement(448220..448699)
location: region:448220-448699:-1
so has part: feature:448220-448699:-1:exon
subclass of: SO_0000010

position:448220:-1
position: 448220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448699:-1
position: 448699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448220-448699:-1:exon

SJPD1_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02355
old locus tag: SJPD1_0475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004510370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent oxidoreductase subunit E
translation: MNTFSFNHANEEKFSDLLERYPDKNSLMLPSLWMVQYQEGWISLDAMQYIAKKLECSAMDVYSVASFYTMFNLQPIGTYHLQLCKTLSCMLAGSKTLQEHLQERLGIRAGETSKDGKFTLSLVECLGSCGTSPCMRLNDDYIENLTIEKLDALLEELSK
SIO_010081: SJPD1_RS02355
subclass of: SO_0000673
so part of: SJPD1_RS02355
location: complement(448220..448699)
location: region:448220-448699:-1
so has part: feature:448220-448699:-1:exon

WP_096045798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448220-448699:-1:exon

SJPD1_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nuoD
locus tag: SJPD1_RS02360
old locus tag: SJPD1_0476
so part of: sequence
location: complement(448696..450363)
location: region:448696-450363:-1
so has part: feature:448696-450363:-1:exon
subclass of: SO_0000010

position:448696:-1
position: 448696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450363:-1
position: 450363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448696-450363:-1:exon

SJPD1_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nuoD
locus tag: SJPD1_RS02360
old locus tag: SJPD1_0476
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768611.1
GO function: GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH dehydrogenase (quinone) subunit D
translation: MPKTFKETFADAYTIDRHGAFVLDKELILKALQTLFEEDKYTFLVDMTAIDYLHVKNQSERFAIVYILRDQNFNNLITLKTYIDSSLATQSITSLFKSANWAEREIWDQYGIHFKNHPNLKRILNHKEFKGHPLRKDYPITQGQLCHQSDDLMDEMTPCLKTKGFTPQDELMFLNLGPAHPASHGTIRTFVALDGENITCAVSEIGYLHRGFEKSCENHTYNQIIPYTDRLNYCSAILNNIAYAHAVEGILGVDLPERAKFIRVIIGELSRIIDHLVCLAAILVDMGALTNYWYLYNPREKVYDLLSKLTGARLTNSYMRIGGMSHDLYDGFENDLNVCLKEIEQGVGETLKLIEHNRIFHDRTQNVGIISKEDAINRGLSGPNLRASGVAYDLRVTAPYYHYETFDFDIALGSVGDVYDRMMVRFEEIKQSTRIIHQAMQRLPEGAICVQDHAISLPPKKEVYTNIEGLMNQFKLIYEGVKVPASEYYRAIEGANGELGFFIVSDGSGTPYKVKVRPPCFYAMAAYPRIIEGSMIADAVLTLGSLNIIAGELDR
SIO_010081: SJPD1_RS02360
subclass of: SO_0000673
so part of: SJPD1_RS02360
location: complement(448696..450363)
location: region:448696-450363:-1
so has part: feature:448696-450363:-1:exon

WP_096045799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448696-450363:-1:exon

SJPD1_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nuoB
locus tag: SJPD1_RS02365
old locus tag: SJPD1_0477
so part of: sequence
location: complement(450356..450874)
location: region:450356-450874:-1
so has part: feature:450356-450874:-1:exon
subclass of: SO_0000010

position:450356:-1
position: 450356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450874:-1
position: 450874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450356-450874:-1:exon

SJPD1_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nuoB
locus tag: SJPD1_RS02365
old locus tag: SJPD1_0477
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004510372.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoB
translation: MAVGAEAIFGESLITTKLDSAISWARESSMWPYIFGTACCAIEFMSVASSKYDISRFGAEVVRFSPRQADLLIIAGTISYKQAPILKKIYDQMSEPKWVISAGACACSGGFYDNYTTLQGIDSIIPVDVYVAGCPPRPEAFLDALLEIQKIQASQSLLEDRAKRVFKGALDA
SIO_010081: SJPD1_RS02365
subclass of: SO_0000673
so part of: SJPD1_RS02365
location: complement(450356..450874)
location: region:450356-450874:-1
so has part: feature:450356-450874:-1:exon

WP_096045800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450356-450874:-1:exon

SJPD1_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02370
old locus tag: SJPD1_0478
so part of: sequence
location: complement(450865..451227)
location: region:450865-451227:-1
so has part: feature:450865-451227:-1:exon
subclass of: SO_0000010

position:450865:-1
position: 450865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451227:-1
position: 451227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450865-451227:-1:exon

SJPD1_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02370
old locus tag: SJPD1_0478
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768613.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit A
translation: MSLELILASSLVALLVILLPTLFLLSQKLGPLNTGNKAKNSLYESGISSPIGSSESRFSAKFYLVAILFVLFDVEIIFMFPWAVNVRELSLFGLFEMFTFIGLLLFGLIYIYRIKALSWQ
SIO_010081: SJPD1_RS02370
subclass of: SO_0000673
so part of: SJPD1_RS02370
location: complement(450865..451227)
location: region:450865-451227:-1
so has part: feature:450865-451227:-1:exon

WP_096045801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450865-451227:-1:exon

SJPD1_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02375
old locus tag: SJPD1_0479
so part of: sequence
location: 451417..452529
location: region:451417-452529:1
so has part: feature:451417-452529:1:exon
subclass of: SO_0000010

position:451417:1
position: 451417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452529:1
position: 452529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451417-452529:1:exon

SJPD1_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02375
old locus tag: SJPD1_0479
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856173.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L,D-transpeptidase family protein
translation: MRYLVFLSLFALALYAATAEDIYKIYKTKGINAVEDFLKKEFESKEVKEVPVKEAKKELVKDKEVIKEPTVKLGQRLFVKPKTPTEKESVSRDYWLRHLKNMDVSYGYYEDVESLIVCEKEKKRCEIFHIEEDGLKLVRGHDDVIMGKSGDKVKRGDLKTPVGVYEITKRFKPTNQFYGPLAFALSYPNLFDVLRNKSGDGIWIHGMPIDGKDRDDLSKGCVVMENNAILNLDTEINAQSAVVIIGESKVPKMTREQIATILSEVYKWQRAWKVNDINAYLNFYSNDFKKSDGSGKVQFSNMKKQIFSRKENKMILFENMSVVPYPTIDDRKLYKISFLQTYKSPSFASKGDKELYIELVGDKMQVLAEK
SIO_010081: SJPD1_RS02375
subclass of: SO_0000673
so part of: SJPD1_RS02375
location: 451417..452529
location: region:451417-452529:1
so has part: feature:451417-452529:1:exon

WP_096045802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451417-452529:1:exon

SJPD1_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02380
old locus tag: SJPD1_0480
so part of: sequence
location: 452539..452775
location: region:452539-452775:1
so has part: feature:452539-452775:1:exon
subclass of: SO_0000010

position:452539:1
position: 452539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452775:1
position: 452775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452539-452775:1:exon

SJPD1_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02380
old locus tag: SJPD1_0480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNENEIDITKELAKLIEARDAFMTYIDANVPKDSKGIAFDFSNHPTLDAQAVYEHFYKLDYQARKIRGFVIRNFEVKA
SIO_010081: SJPD1_RS02380
subclass of: SO_0000673
so part of: SJPD1_RS02380
location: 452539..452775
location: region:452539-452775:1
so has part: feature:452539-452775:1:exon

WP_096045803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452539-452775:1:exon

SJPD1_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02385
old locus tag: SJPD1_0481
so part of: sequence
location: 452781..453809
location: region:452781-453809:1
so has part: feature:452781-453809:1:exon
subclass of: SO_0000010

position:452781:1
position: 452781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453809:1
position: 453809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452781-453809:1:exon

SJPD1_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02385
old locus tag: SJPD1_0481
EC number: 5.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768616.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine racemase
translation: MAFITINKAHFFHNLDILCAKAGGKAKLMAVLKDNAYGHDLRLMAELASEYGLIRAAVKNIEEAESIADLFEEVLVLVDHPTSRKLSSSISLAAHSLEALQALPMGTSIHLSLDTGMHRNGIKEEQIEEALALIHAKKLQLKGVFTHFRGADELSSEFFWQRANFERGKKRIKALEAHYGLPHVAFHCCNSAGLLRTHSLGDDDYARPGIAMYGYTTLNPFIATYDLKPVLSLWAEKLSTRVLKKGERVGYGSVYEAHEDEIISTYDIGYGDGFFRFDGFKPVKMADGSFTKGRMSMDSFCLGGDAQNVCMFDDANPLAEQFNTISYEIITKLYPALKHVII
SIO_010081: SJPD1_RS02385
subclass of: SO_0000673
so part of: SJPD1_RS02385
location: 452781..453809
location: region:452781-453809:1
so has part: feature:452781-453809:1:exon

WP_096045804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452781-453809:1:exon

SJPD1_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02390
old locus tag: SJPD1_0482
so part of: sequence
location: complement(453806..455059)
location: region:453806-455059:-1
so has part: feature:453806-455059:-1:exon
subclass of: SO_0000010

position:453806:-1
position: 453806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455059:-1
position: 455059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453806-455059:-1:exon

SJPD1_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02390
old locus tag: SJPD1_0482
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856176.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MQKKHFIFLAFTITILYWILDAYANASLYNSALSDELLLTTPHSLVSVKLLTASLLFIVSLTPLFFKPNTFQKTPKEAINEFGELQRVADILFSSLSTKINVIKSLEILQEILHLESSLLFIYNKESLTLYNENEFIKATFRSKEILPFRTNASRSAVEEVAIRCFIEKRAFSQDPVKVDTKPFTLFSFMLKEDRSEFPLGNLMLASHDAHFIEHAIPMIQKYVRMLTFALSLAAKKELLQSINTQYSSDTISHFDKVLNIINFTKVQEYIEHEFKRHKRYHTELTLVLIDIIMLKNLTKIFPAEVITAFKKDFIQLVKTNTREVDILGKWTNDQFALLLPDVDFRAGQKVAQKLQAIFEETKFARVGKISCSYGITSLAPKDTMGSFKARVEGALVAASLKEGNAIEVKLQMTPDL
SIO_010081: SJPD1_RS02390
subclass of: SO_0000673
so part of: SJPD1_RS02390
location: complement(453806..455059)
location: region:453806-455059:-1
so has part: feature:453806-455059:-1:exon

WP_096045805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453806-455059:-1:exon

SJPD1_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02395
old locus tag: SJPD1_0483
so part of: sequence
location: complement(455064..455447)
location: region:455064-455447:-1
so has part: feature:455064-455447:-1:exon
subclass of: SO_0000010

position:455064:-1
position: 455064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455447:-1
position: 455447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455064-455447:-1:exon

SJPD1_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02395
old locus tag: SJPD1_0483
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856177.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLIGHELISSAPFYRVDSVEQIAKTPSNATILFNFDPTLIAYCSTQKLSFALHVKQIKELVLANALGASYFVVDKTLALHAQKVADDYLFEGKVLLLSNDDNDIEFAASHTIDGILFESAITSSLS
SIO_010081: SJPD1_RS02395
subclass of: SO_0000673
so part of: SJPD1_RS02395
location: complement(455064..455447)
location: region:455064-455447:-1
so has part: feature:455064-455447:-1:exon

WP_096045806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455064-455447:-1:exon

SJPD1_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02400
old locus tag: SJPD1_0484
so part of: sequence
location: complement(455447..455671)
location: region:455447-455671:-1
so has part: feature:455447-455671:-1:exon
subclass of: SO_0000010

position:455671:-1
position: 455671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455447-455671:-1:exon

SJPD1_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02400
old locus tag: SJPD1_0484
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PP0621 family protein
translation: MLLKIALFIAVIFLIYLFFFKNSRKEDIQKKSSKKVLEGETMVECQACSTFISHKEAIIKDGLFYCSKECARLP
SIO_010081: SJPD1_RS02400
subclass of: SO_0000673
so part of: SJPD1_RS02400
location: complement(455447..455671)
location: region:455447-455671:-1
so has part: feature:455447-455671:-1:exon

WP_087437725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455447-455671:-1:exon

SJPD1_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rsmG
locus tag: SJPD1_RS02405
old locus tag: SJPD1_0485
so part of: sequence
location: complement(455661..456236)
location: region:455661-456236:-1
so has part: feature:455661-456236:-1:exon
subclass of: SO_0000010

position:455661:-1
position: 455661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456236:-1
position: 456236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455661-456236:-1:exon

SJPD1_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rsmG
locus tag: SJPD1_RS02405
old locus tag: SJPD1_0485
EC number: 2.1.1.170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856179.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
GO process: GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
translation: MMNTHYDLPQSFWSNVEILIELLLKYNLTHNISGAKTKEAVLKNIDDSIYPLQFLHVNELKRAIDIGTGAGFPGLLLALALPQVHFTLFEPIAKKSAFLHLAKTTLELKNVDISTNRVEKVVPFNVDLISSRAVTNTKMLIKLCKNFITPDTTLLFYKGELVEEEIKGLRNCQVYQRDKRHYLVMKDVDVA
SIO_010081: SJPD1_RS02405
subclass of: SO_0000673
so part of: SJPD1_RS02405
location: complement(455661..456236)
location: region:455661-456236:-1
so has part: feature:455661-456236:-1:exon

WP_226372230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455661-456236:-1:exon

SJPD1_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02410
old locus tag: SJPD1_0486
so part of: sequence
location: 456382..457230
location: region:456382-457230:1
so has part: feature:456382-457230:1:exon
subclass of: SO_0000010

position:456382:1
position: 456382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457230:1
position: 457230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456382-457230:1:exon

SJPD1_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02410
old locus tag: SJPD1_0486
inference: COORDINATES: protein motif:HMM:NF019974.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrate- and nitrite sensing domain-containing protein
translation: MSIKKKLLFVLAIVMAYLFLNIFQVMNESLNQKKKLSEAATLNTLSSKLSLFIHETQKERGMSAGFIGSEGKKFGDVLPKQRVLTDESLVKLKEYVVQIDLSKFPEELQKELSSLQEDASKISSIRAQVDGLKIRMQDSVAFYTKMNTKILHVTDSVAKVSEVADLVKVLSSYSHFLKLKELVGIERVVMSGTFASNAFAPGIFAKWNGLMSSQVAYTEAFLAFATDDIKQLYAQKMNDNSINEVEKFRSIALAKVNEGNFGVDPQIWFNTITQKIEILKTI
SIO_010081: SJPD1_RS02410
subclass of: SO_0000673
so part of: SJPD1_RS02410
location: 456382..457230
location: region:456382-457230:1
so has part: feature:456382-457230:1:exon

WP_096045807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456382-457230:1:exon

SJPD1_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02415
old locus tag: SJPD1_0487
so part of: sequence
location: 457259..458362
location: region:457259-458362:1
so has part: feature:457259-458362:1:exon
subclass of: SO_0000010

position:457259:1
position: 457259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458362:1
position: 458362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457259-458362:1:exon

SJPD1_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02415
old locus tag: SJPD1_0487
inference: COORDINATES: protein motif:HMM:NF012245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MIQKLDHDATNEMIISILISGVFGIVLLAILFFTQKGIIESVYSSHVQISTMAKEKDLTQRIVLKNTTDELAQISDDINNMVTSFATTLTHTLQTLDVTNAQSQKLDHVIVSLGESIEHQEKNIVDMNLLVSDVGMELDGIEKASNATTDDLHITANTLDEFIQSLNQSVQSIENGSERQNDLAQKVHTLSDQARSIREILSIIGDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLLEISANVNVITQSVNDIAEDTKQTTEEMLESSQLAKELILHVEGTKEKLSSTYIKSTDVRNKTTYVATRTKNLVGLMASIVNGTTLNKKLSHEVGEVSVSLSNGANELEKTLKQFKV
SIO_010081: SJPD1_RS02415
subclass of: SO_0000673
so part of: SJPD1_RS02415
location: 457259..458362
location: region:457259-458362:1
so has part: feature:457259-458362:1:exon

WP_096045808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457259-458362:1:exon

SJPD1_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02420
old locus tag: SJPD1_0488
so part of: sequence
location: complement(458389..458814)
location: region:458389-458814:-1
so has part: feature:458389-458814:-1:exon
subclass of: SO_0000010

position:458389:-1
position: 458389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458814:-1
position: 458814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458389-458814:-1:exon

SJPD1_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02420
old locus tag: SJPD1_0488
inference: COORDINATES: protein motif:HMM:NF013996.2
GO function: GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: desulfoferrodoxin family protein
translation: MLRRDALKLAAVAALATTYASAYDEKLIVNKKKMEIKDPANMTELELKHSPEIKVGAADAQGFSLVEVNIGQKGVIHPSVDNHWIYEIELLADGKKVADVSLEPTTSRGFLAARINTKDVKMLSAIAYCNLHGEYSASIKL
SIO_010081: SJPD1_RS02420
subclass of: SO_0000673
so part of: SJPD1_RS02420
location: complement(458389..458814)
location: region:458389-458814:-1
so has part: feature:458389-458814:-1:exon

WP_096045809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458389-458814:-1:exon

SJPD1_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02425
old locus tag: SJPD1_0489
so part of: sequence
location: complement(458851..459444)
location: region:458851-459444:-1
so has part: feature:458851-459444:-1:exon
subclass of: SO_0000010

position:458851:-1
position: 458851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459444:-1
position: 459444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458851-459444:-1:exon

SJPD1_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02425
old locus tag: SJPD1_0489
EC number: 1.15.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856181.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: superoxide dismutase
translation: MAIVLPNLPYAHEALEPYIGAKTLEIHHGKHHQTYVTNLLKLIEGTDLANEPLEGLILKSVNNPDRVGIFNNAAQVWNHTFYWNSMKPKGGGAPSGDIAAKINAAFGSYDAFIQAFKNAGLTQFGSGWAWLVIKNGTLEIMKTANADTPIAHGIKPILTVDVWEHAYYLDYQNKRADYLDIFFNHLINWDFANANLK
SIO_010081: SJPD1_RS02425
subclass of: SO_0000673
so part of: SJPD1_RS02425
location: complement(458851..459444)
location: region:458851-459444:-1
so has part: feature:458851-459444:-1:exon

WP_096045810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458851-459444:-1:exon

SJPD1_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: mscL
locus tag: SJPD1_RS02430
old locus tag: SJPD1_0490
so part of: sequence
location: complement(459583..460011)
location: region:459583-460011:-1
so has part: feature:459583-460011:-1:exon
subclass of: SO_0000010

position:459583:-1
position: 459583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460011:-1
position: 460011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459583-460011:-1:exon

SJPD1_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: mscL
locus tag: SJPD1_RS02430
old locus tag: SJPD1_0490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856182.1
GO function: GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: large conductance mechanosensitive channel protein MscL
translation: MLKEFRDFLLKGNVVDMAVGFIFGAAFATIVKSLVTNVIMPPIGLLLGNVDFSSLFIALDGKTYASLADLEKAGAPAIKLGVFFNDLTSFVILGFVMFMMIKGYGKIAPKKAPEAITKACPECAMAIPVAAKKCPYCATLQA
SIO_010081: SJPD1_RS02430
subclass of: SO_0000673
so part of: SJPD1_RS02430
location: complement(459583..460011)
location: region:459583-460011:-1
so has part: feature:459583-460011:-1:exon

WP_096045811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459583-460011:-1:exon

SJPD1_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02435
old locus tag: SJPD1_0491
so part of: sequence
location: complement(460022..460447)
location: region:460022-460447:-1
so has part: feature:460022-460447:-1:exon
subclass of: SO_0000010

position:460022:-1
position: 460022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460447:-1
position: 460447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460022-460447:-1:exon

SJPD1_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02435
old locus tag: SJPD1_0491
inference: COORDINATES: protein motif:HMM:NF025054.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MIRNATAEDSDRIVELLAQLGYANTHSFCKERIQELLANPDAMLFCYEIEGSVIALLSLHVIPQIALLGSFLRISYFIVDETMRSHHIGSELEAYATYIAKERGCDRIEVHCHERRKEAHRFYERHGYVESPKYFIKQITY
SIO_010081: SJPD1_RS02435
subclass of: SO_0000673
so part of: SJPD1_RS02435
location: complement(460022..460447)
location: region:460022-460447:-1
so has part: feature:460022-460447:-1:exon

WP_096045812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460022-460447:-1:exon

SJPD1_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: ribA
locus tag: SJPD1_RS02440
old locus tag: SJPD1_0492
so part of: sequence
location: complement(460456..461019)
location: region:460456-461019:-1
so has part: feature:460456-461019:-1:exon
subclass of: SO_0000010

position:460456:-1
position: 460456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461019:-1
position: 461019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460456-461019:-1:exon

SJPD1_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: ribA
locus tag: SJPD1_RS02440
old locus tag: SJPD1_0492
EC number: 3.5.4.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009294552.1
GO function: GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP cyclohydrolase II
translation: MKIEISEVANLPSRFGTFKIQSFKEGIKEHLVIFKEPLGEIPLVRVHSECLTGDSIGSLKCDCRDQLEFALKTVEQNGGMVIYLRQEGRNIGLLNKVNAYALQDKGLNTIEANHQLGFLDDERTYEMVEFILDYFKITKIKLLTNNPKKIESLKHIDIVERIPVIIPSNKFNAGYLKTKKEQMGHLL
SIO_010081: SJPD1_RS02440
subclass of: SO_0000673
so part of: SJPD1_RS02440
location: complement(460456..461019)
location: region:460456-461019:-1
so has part: feature:460456-461019:-1:exon

WP_096045813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460456-461019:-1:exon

SJPD1_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: hemB
locus tag: SJPD1_RS02445
old locus tag: SJPD1_0493
so part of: sequence
location: 461097..462071
location: region:461097-462071:1
so has part: feature:461097-462071:1:exon
subclass of: SO_0000010

position:461097:1
position: 461097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462071:1
position: 462071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461097-462071:1:exon

SJPD1_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: hemB
locus tag: SJPD1_RS02445
old locus tag: SJPD1_0493
EC number: 4.2.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768624.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO process: GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porphobilinogen synthase
translation: MFKRFRRLRMNATLRSLVRETTLSMDDFIYPLFAKSGEGFKKEISSMPGVYQMSIDEIVKECGSLQELGINAIILFGIPEVKDSVGSDALCEHGIIASAIKAVKKAYPSMFVVTDLCFCEFTDHGHCGILDMEHESVDNDATLEILAKQALVHAHAGADMIAPSGMMDGMIEALREALDGEGFINLPIMSYSTKFASAYYGPFRDVAESAPSFGDRKTYQMDPANRREAIAESVEDEMQGADILMVKPALAYLDIVRDVRNATSTPLCVYNVSGEYALLKAAAKAGVIDYERVMMETMIAFKRAGADIIISYHAKEVAEILRRK
SIO_010081: SJPD1_RS02445
subclass of: SO_0000673
so part of: SJPD1_RS02445
location: 461097..462071
location: region:461097-462071:1
so has part: feature:461097-462071:1:exon

WP_096045814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461097-462071:1:exon

SJPD1_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: argF
locus tag: SJPD1_RS02450
old locus tag: SJPD1_0494
so part of: sequence
location: 462146..463072
location: region:462146-463072:1
so has part: feature:462146-463072:1:exon
subclass of: SO_0000010

position:462146:1
position: 462146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463072:1
position: 463072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462146-463072:1:exon

SJPD1_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: argF
locus tag: SJPD1_RS02450
old locus tag: SJPD1_0494
EC number: 2.1.3.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856185.1
GO function: GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO process: GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ornithine carbamoyltransferase
translation: MRHFLTLKDYSKAEILEIIDLAIKIKKQAKKGKYKPYLENQTLGMIFEKSSTRTRVSFEVGIHQLGGVGLFLSSNDLQLGRGEPMKDTARVISRMVDMVMIRTFAQSTLEEFAAYSRVPVISGLSDSYHPVQLMADYLTMVEYKKDQNPIVAYVGDGNNMTHSWLMLASKLGFELRIATPKGYEVDAKILEDALAFAQESGAVIHIGNDPKEAITGATVVTTDTWVSMGQESEKAARVAAFQGYMVDDAMMSLAQDDAMFLHCLPAYRDYEVSESVFEAHADEIFDEAENRLHAQKAVMVWLDRHRNS
SIO_010081: SJPD1_RS02450
subclass of: SO_0000673
so part of: SJPD1_RS02450
location: 462146..463072
location: region:462146-463072:1
so has part: feature:462146-463072:1:exon

WP_096045815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462146-463072:1:exon

SJPD1_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02455
old locus tag: SJPD1_0495
so part of: sequence
location: 463102..463560
location: region:463102-463560:1
so has part: feature:463102-463560:1:exon
subclass of: SO_0000010

position:463102:1
position: 463102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463560:1
position: 463560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463102-463560:1:exon

SJPD1_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02455
old locus tag: SJPD1_0495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856186.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2603 domain-containing protein
translation: MIEKISKGLSVSKQKEQTVLEIVPSEAEETKLLRLKNGSWDNAKEPWLVYDENQKLHALLSIDTLSKMIEHFKKAEQEALFLKLEKSILQQLPLDFQDVWAVATEEIKKSKKSEIDFDKLIKKIKKDHPNLFLDLKDLYLPEGASIINATTR
SIO_010081: SJPD1_RS02455
subclass of: SO_0000673
so part of: SJPD1_RS02455
location: 463102..463560
location: region:463102-463560:1
so has part: feature:463102-463560:1:exon

WP_226372231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463102-463560:1:exon

SJPD1_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: hemN
locus tag: SJPD1_RS02460
old locus tag: SJPD1_0496
so part of: sequence
location: 463569..464942
location: region:463569-464942:1
so has part: feature:463569-464942:1:exon
subclass of: SO_0000010

position:463569:1
position: 463569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464942:1
position: 464942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463569-464942:1:exon

SJPD1_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: hemN
locus tag: SJPD1_RS02460
old locus tag: SJPD1_0496
EC number: 1.3.98.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002941101.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxygen-independent coproporphyrinogen III oxidase
translation: MIDFDKFAKYSKPGPRYTSYPTAPEFHEGFTHQSYESILATQDKSRKLSLYFHLPFCRSACYFCGCNVVYTSKEDKKERYISYLERELELLSKHLDTSREVIQMHFGGGTPTFFSAPQLKRIIGAIRSHFKNFAKDAEISCEIDPRYLTKEQLEVLTCNGFNRVSYGVQDFNEEVQKAIHRIQPYDVTDNVVKMAKSSGIKSINMDLIYGLPYQTFETFQETLRLAVSLDPSRLAVFNYAHVPWMKKSMRKIDETTLPHPSVKLAIMRYTIDYLESNGYKMIGMDHFAKPDDELFLAIEKGELHRNFQGYTTKGGADLIGIGLTSIGEGLKHYVQNFKEMDAYEKAIDAGVLPVHRGLTLNDDDVLRKAVIMEMMSNFKLNIAGIEAQFGIDFFDYFADAVAALAPFEQEELVIVDRVAKKILVNTTGTLLIRNIVMPFDAYLQKIPEDKRRFSKTV
SIO_010081: SJPD1_RS02460
subclass of: SO_0000673
so part of: SJPD1_RS02460
location: 463569..464942
location: region:463569-464942:1
so has part: feature:463569-464942:1:exon

WP_096045817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463569-464942:1:exon

SJPD1_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02465
old locus tag: SJPD1_0497
so part of: sequence
location: 464946..466208
location: region:464946-466208:1
so has part: feature:464946-466208:1:exon
subclass of: SO_0000010

position:464946:1
position: 464946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466208:1
position: 466208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464946-466208:1:exon

SJPD1_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02465
old locus tag: SJPD1_0497
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008336865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (Fe-S)-binding protein
translation: MFKFDVTSDACVKCGKCIPVCTIHEVNRDEVTSPRGFLDLLGAYQRGELELDKNAKSIFESCFLCTNCVSVCPNDLPVDMLIEQARNDIRKKFGLAWYKKLAFFLLRNRNIMDVLARFGFMFQTCGFKIVEKKSSMYLRNFPIIKMDRLFPSLAKKTFLNSHPDVIHNGGKGKVGIFIGCLANYMYTDIGKSLLEILKELQIDAYLIKQQKCCGAPQYFTGDFDSVDYLAKFNIEYIEGFVNELDAIIIPEATCSAMIKEDYAHFFHDQPEWKARAIAIKPHIFMATEYLEKKTNLAEILATKARKSEVVTYHDPCHARKMQGVWKEPRNLISQNYVIKEMSDPNRCCGFGGVTMQTGNYRFAKAAGLPKAAMIKETGAEYVSAECSACRMQLGDAMHGQKVDAIFKNPIELIAKALREG
SIO_010081: SJPD1_RS02465
subclass of: SO_0000673
so part of: SJPD1_RS02465
location: 464946..466208
location: region:464946-466208:1
so has part: feature:464946-466208:1:exon

WP_096045818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464946-466208:1:exon

SJPD1_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02470
old locus tag: SJPD1_0498
so part of: sequence
location: 466357..469194
location: region:466357-469194:1
so has part: feature:466357-469194:1:exon
subclass of: SO_0000010

position:466357:1
position: 466357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469194:1
position: 469194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466357-469194:1:exon

SJPD1_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02470
old locus tag: SJPD1_0498
inference: COORDINATES: protein motif:HMM:NF012707.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter substrate-binding domain-containing protein
translation: MKAVISLLFILISFMSYSQASSIDITPSEQAWLDKTKILKVRITKDLPPYQFIQDGEYVGISVEYIKFFVAMFNLKIEYVTDGSWTEALRRVQTHDGIDVILRVTPNSELKQTMLFSKSYCSFPFALLTPSTLKAENFFDSNPKKIAIVPSYVINENLKQDYPHFLYMTYPNSLEAMRAVNAHSVDGFIGDIAIMSMFVQAYHLDNVRISNIPHYTTEEQSVATAKDWPEFISLFNKMLDSMPTDLHVKIKRKYLPFATSERPSPIVPEIELTESEKAYLQKHPVISVTNELSWYPYDFNEDGEAKGYSVDYMRLLADKIGIRLNFISGTWPNVYEKFKNREISVAQPLIPSDERHQKFLYSTKFITMDLALVSQTKRHDINTIDDLKGKTVGAGRAWPTTKYLKEEYPELTVVEYETTKEMLEAVAFGLIDAGVDDALSVQYVISKEMLSNLHIVSKLDLQNLRDKNLYIMMHPEDEPLQSIINKALNNVTQEELSTLKSKWSKSILPKETRLAFSLDEQIYLAQKKRITMCIDPDWMPLEMNQKGKHVGMAADYMHEMEQFIGLPIELVNTQTWLESLEYAKERKCDIFSLAMPTPERRLYMNFTHPYMQIPIVLISNIDKVFYTDIDMLTGKSIGIAKGYAYGEILKVRYPNMHFVEVASDADGLKHVEQKKLFGYIGTLATVAYQIQKDYYGSLKIVGKFDDKWELGVATRNDEPLLLSIFEKAIESIDPTKNQSILNKWISVNYEERMNYTYIYLLAVITVVIILIVLIRQYQLKKYNAQLEILSNTDKLTGIHNRLKLDDILEYEKKIFDRDQSPLSIIIFDLDYFKNVNDNYGHKRGDEVLQSIAKIVTNVKRETDIFGRWGGEEFLLICRDTNIKGARHLAEKIRAAIEAYEFPEIISVTASFGTAQFEKYDSIIKIFDKADKALYEAKEHGRNRVV
SIO_010081: SJPD1_RS02470
subclass of: SO_0000673
so part of: SJPD1_RS02470
location: 466357..469194
location: region:466357-469194:1
so has part: feature:466357-469194:1:exon

WP_168171306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466357-469194:1:exon

SJPD1_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02475
old locus tag: SJPD1_0499
so part of: sequence
location: complement(469212..470390)
location: region:469212-470390:-1
so has part: feature:469212-470390:-1:exon
subclass of: SO_0000010

position:469212:-1
position: 469212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470390:-1
position: 470390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469212-470390:-1:exon

SJPD1_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02475
old locus tag: SJPD1_0499
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768632.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar transporter
translation: MYSSIFLSWKPWFPVVGLTISAFIFNTTEFAPISLLTDIANDFNISEAHAGLMMTVYAWVVASLSLPLMLLTKDMERRRLLLLLFALFIASHLLSAIAWSFWILMISRIGIAFSHAVFWSITASLTYRLAPEGKKTRALGILATGTSLAIVLGLPLGRIIGQSLGWRATFGCIAILAFLMLFVLMKVLPLLPSVNAGSLKSLPLLVKRPALMGVYLLTALAITAHFTAYSYIEPFVQQIAHLSAHFATLTLFIFGIAGFIGSAIFAYFKHKYPFTIIVCSLGLLIVALLLMRPLAPYQFLLSCVCLGWGIAICLISLILQVTVLELTPDATDVAMSLYSGIYNIGIGGGAFVGSLVILHSSMAYVGIIGALFGCTALLLAIWIWKTYLLKRS
SIO_010081: SJPD1_RS02475
subclass of: SO_0000673
so part of: SJPD1_RS02475
location: complement(469212..470390)
location: region:469212-470390:-1
so has part: feature:469212-470390:-1:exon

WP_096045820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469212-470390:-1:exon

SJPD1_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02480
old locus tag: SJPD1_0500
so part of: sequence
location: 470529..470933
location: region:470529-470933:1
so has part: feature:470529-470933:1:exon
subclass of: SO_0000010

position:470529:1
position: 470529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470933:1
position: 470933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470529-470933:1:exon

SJPD1_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02480
old locus tag: SJPD1_0500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856192.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YchJ family metal-binding protein
translation: MKEANLCPCGSGKMYAQCCELYHKNYNAPTCETLMRSRYSAFVFGLIDYLYETTHPSHRTKKLKEEITFTCKGLAWTKLEVLETWQGGENDKVGKVSFRASYVQDGHEGLHGEHSRFKRYGKAWMYVDGEVKGE
SIO_010081: SJPD1_RS02480
subclass of: SO_0000673
so part of: SJPD1_RS02480
location: 470529..470933
location: region:470529-470933:1
so has part: feature:470529-470933:1:exon

WP_087437743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470529-470933:1:exon

SJPD1_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02485
old locus tag: SJPD1_0501
so part of: sequence
location: 470933..471589
location: region:470933-471589:1
so has part: feature:470933-471589:1:exon
subclass of: SO_0000010

position:471589:1
position: 471589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470933-471589:1:exon

SJPD1_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02485
old locus tag: SJPD1_0501
inference: COORDINATES: protein motif:HMM:NF012257.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MYALDVIQQELKEDIARFGRVVYVNKGEILMRPEECMEHFFVILEGRVKISQINFETGKEQILYLLSNGDMYDIITLLDAKVHENVAMALDNVKLLVFPIELFREWIETKPSFNKLFLPYVAKQLREVETLASDLSLYDTTTRLVKLIAKNIETQGDKQTLKLINNLSHEELASLVGTVRKVLNRNLQSLKKQGLIDIKRKEIFIKDSQNLLEHLPEE
SIO_010081: SJPD1_RS02485
subclass of: SO_0000673
so part of: SJPD1_RS02485
location: 470933..471589
location: region:470933-471589:1
so has part: feature:470933-471589:1:exon

WP_096045821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470933-471589:1:exon

SJPD1_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02490
old locus tag: SJPD1_0502
so part of: sequence
location: 471771..472199
location: region:471771-472199:1
so has part: feature:471771-472199:1:exon
subclass of: SO_0000010

position:471771:1
position: 471771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472199:1
position: 472199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471771-472199:1:exon

SJPD1_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02490
old locus tag: SJPD1_0502
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768635.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20/alpha crystallin family protein
translation: MLVTRFNPYKELKALESRLFNYYPIETEESDISAFKPTVSTREGEFAYHVEIDLPGVKKEDIHIDLKDNQIVISGERSFKEERQEKDYYKVESSYGKFQRSFALPENVDVENIEASSENGVLEVVLPKLKVEKAEVKKIQVK
SIO_010081: SJPD1_RS02490
subclass of: SO_0000673
so part of: SJPD1_RS02490
location: 471771..472199
location: region:471771-472199:1
so has part: feature:471771-472199:1:exon

WP_096045822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471771-472199:1:exon

SJPD1_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02495
old locus tag: SJPD1_0503
so part of: sequence
location: 472388..474706
location: region:472388-474706:1
so has part: feature:472388-474706:1:exon
subclass of: SO_0000010

position:472388:1
position: 472388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474706:1
position: 474706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472388-474706:1:exon

SJPD1_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02495
old locus tag: SJPD1_0503
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:NF015859.2
GO function: GO:0009975 - cyclase activity [Evidence IEA]
GO process: GO:0009966 - regulation of signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MARLKLLSKSFLFALLILVCGVSFSGYLAWKSATWIQTLENERFTTATKQTALLIRNKLNENIQLLHSAVAFITASDNVTREEWYFFTKEHTLETSFIGQEGLVYAPRIKINERTQHEELMHAEGLTHYQIHPKTSNADAYPIVLIEPFNERNKKALGFDLFSETTRQNAIKEAIQKRDIAISSKIQLIQRADSELNAGFIIVHPIYTKDILIKTPEKQDDAFIGIVSIAINAQKLFMDVLGARYITLDFEIYDGDTLLETEKLYDSNPSMKTARLEHNLLIDIYGKHWTLHFKTNEALDLGISQYLPWIELFFGIAFSFILAGWIYALQQTQKKAYAIAADKTKLLAKSESKIRTIFQTMQEGIIVLDKERIIIECNLAAQGMLGFSKSEIVGKSSNDLNWNFIHEDGSAFHMEDRPYYKVFMTGVPQSNIMIGMKRQDSLVLWLKMNAQPLYSDDFKDVNSVLITFSDITEYQKSKRELEKYLQIIDAHVIISSTDLHGIITEVSEAFCKISGYSQEELIGRSHNIVRHPDMPTTLYKEMWSALKKGISWSGEIKNRRKDGSDYWIETIIEPRYDEEYSLVGFTAIRHDITDKKRVEELSITDRLTGLYNRLKLDELFASYLSITKRHQTPFSIVLLDIDKFKSVNDTYGHQVGDSLLQEIAKLLKTNVRFEDAVGRWGGEEFLILLPNSNSEDARLLAEKLRGVIEAEDFAYVGSRTASFGVATYHQNDDEKSMTARADEALYLAKENGRNRVEVEIHTCNLPSSSTPS
SIO_010081: SJPD1_RS02495
subclass of: SO_0000673
so part of: SJPD1_RS02495
location: 472388..474706
location: region:472388-474706:1
so has part: feature:472388-474706:1:exon

WP_167750131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472388-474706:1:exon

SJPD1_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: lgt
locus tag: SJPD1_RS02500
old locus tag: SJPD1_0504
so part of: sequence
location: 474748..475566
location: region:474748-475566:1
so has part: feature:474748-475566:1:exon
subclass of: SO_0000010

position:474748:1
position: 474748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475566:1
position: 475566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474748-475566:1:exon

SJPD1_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: lgt
locus tag: SJPD1_RS02500
old locus tag: SJPD1_0504
EC number: 2.5.1.145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856196.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO process: GO:0009249 - protein lipoylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolipoprotein diacylglyceryl transferase
translation: MHFWNNIYSQFDPVAFKLGPIAVHWYGIMYICALLGALYAAKWFVKKDNLGFSNQTLESYFIWIEIGIILGARIGYILFYDPHVDYYLAHPWQMFNPFIDGTFVGIRGMSYHGAIVGFFIGTWFFYLKHKINVWRLLDVVALSVPVGYIFGRIGNFLNQELFGRPTDVPWGIYVDGVLRHPSQLYEAFLEGFMVFVMLYVYRNFKKYDGELIALYGFLYSLGRFIAEFWREPDFQIGFVYGDWMSKGQALSILMIIASLLLYGVIIKRGKRG
SIO_010081: SJPD1_RS02500
subclass of: SO_0000673
so part of: SJPD1_RS02500
location: 474748..475566
location: region:474748-475566:1
so has part: feature:474748-475566:1:exon

WP_096045824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474748-475566:1:exon

SJPD1_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02505
old locus tag: SJPD1_0505
so part of: sequence
location: 475756..476538
location: region:475756-476538:1
so has part: feature:475756-476538:1:exon
subclass of: SO_0000010

position:475756:1
position: 475756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476538:1
position: 476538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475756-476538:1:exon

SJPD1_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02505
old locus tag: SJPD1_0505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856197.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarate reductase cytochrome b subunit
translation: MSDLLEGFLGTSVEGKKSRVPAKLDYIQSATGLFLGLFMWGHMFFVSTILISKDFMYTITKMFEGSMFLSEPQPIIVSGIVLFVFAVFIVHAMLGMRKLPINFRQYQAYKTHMGMMKHDDTTMWFTQAFTGFAMFFLGSAHLFTMATQADKIGPFGSSDRMYSEFMWPFYLLLLLAVEFHGGIGLYRLCVKWGWFEGADAKSSRKNLKKAKWAITTFFLALGLLTLAAYVKIGYEHRNNVGEKYKPTAQLEVRYDVKVRA
SIO_010081: SJPD1_RS02505
subclass of: SO_0000673
so part of: SJPD1_RS02505
location: 475756..476538
location: region:475756-476538:1
so has part: feature:475756-476538:1:exon

WP_096045825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475756-476538:1:exon

SJPD1_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02510
old locus tag: SJPD1_0506
so part of: sequence
location: 476541..478526
location: region:476541-478526:1
so has part: feature:476541-478526:1:exon
subclass of: SO_0000010

position:476541:1
position: 476541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478526:1
position: 478526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476541-478526:1:exon

SJPD1_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02510
old locus tag: SJPD1_0506
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768638.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0022900 - electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarate reductase flavoprotein subunit
translation: MNVKYCDALVIGGGLAGLRAAIATQSKGLSTTVLSLCPVKRSHSAAAQGGMQASLGNSKMSRGDNEDVHFADTVKGSDWGCDQEVARMFVTVAPKAIRELAGWGVPWTRIAKGGREAIINAERTTIVEDDEVHGYIHSRDFGGTKKWRTCYTADATGHTMLFGVANEALKHNVNIEDRKEAIALIHENNRCYGAIVRDLVTGELWAYVAKGTLIATGGYGRLYKQTTNAVICDGIGAAIALETGVATLGNMEAVQFHPTPIVPSGILLTEGCRGDGGLLRDVDGHRFMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGEHLWLDISILGRAHIERNLRDVQEICQIFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESPTLSGLFSAGEAACWDMHGFNRLGGNSVSETVVAGMIVGDYFADYCLSNEVNVNTATIEKALKKQSDFINHLLTNKGKFNIFEIKNRMRDIMWEKVAIFRDGKGLAEAVNELEELLKKSHDVTIKSKTTSANPELEEAYRVPMMLKLALCVAAGARDRTESRGAHYREDFLKRDDANWLKRTLTSWKEGATLPTVSYEDLDIMKMEIPPAFRGYGAKGMIIENELSLKRQEEVDKLREEMEAAGKDRYMIQDALMPFELQPYYKAKNERFGDAK
SIO_010081: SJPD1_RS02510
subclass of: SO_0000673
so part of: SJPD1_RS02510
location: 476541..478526
location: region:476541-478526:1
so has part: feature:476541-478526:1:exon

WP_096045826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476541-478526:1:exon

SJPD1_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02515
old locus tag: SJPD1_0507
so part of: sequence
location: 478523..479242
location: region:478523-479242:1
so has part: feature:478523-479242:1:exon
subclass of: SO_0000010

position:478523:1
position: 478523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479242:1
position: 479242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478523-479242:1:exon

SJPD1_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02515
old locus tag: SJPD1_0507
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009650540.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarate reductase iron-sulfur subunit
translation: MSRTITIRAMKYNPQSKLSKAHFAEYKLEETDGMTLFIALTKIRETMDADLSFDFVCRAGICGSCGMMVNGKPALACRTLTKNFPGGVIQLMPMPAFKLIKDLSVDTGNWMNGMSKRVESWIHTNHKPDISKLEAPMDPKLADETFELDRCIECGICVAACGTKLMRPNFIGAVGLNRVARFAMDPHDERTDEDFYELVGDDDGIFGCMSLVACEDNCPKHLPLQSKIAYMRRKLVALK
SIO_010081: SJPD1_RS02515
subclass of: SO_0000673
so part of: SJPD1_RS02515
location: 478523..479242
location: region:478523-479242:1
so has part: feature:478523-479242:1:exon

WP_096045827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478523-479242:1:exon

SJPD1_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02520
old locus tag: SJPD1_0508
so part of: sequence
location: 479375..481747
location: region:479375-481747:1
so has part: feature:479375-481747:1:exon
subclass of: SO_0000010

position:479375:1
position: 479375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481747:1
position: 481747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479375-481747:1:exon

SJPD1_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02520
old locus tag: SJPD1_0508
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768640.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dynamin family protein
translation: MHIINDFFLLIWGERLNQEVVFDEKHTTEFDQYRLTSFDNFCDSVAILLIMSPQNFTNMAILEEPKTVLNTLFQHATFSKENIQYAQSQLLGYLVTLGNLQVNHAITKRLELLKKEGIISYDAVRSLGSIISLIEEKKIEVTSLHVKRATSQENYYKTKLNLLLTAIENLKQAVETPRLHDRLSAIPERLENQRFSIGITGVMNAGKSTMLNALLGQEVLGTSVVPETANLTLIKYAKNPYAIVNFWNTKEWSKIEEGAKSLKSLEAFVKESKAHFGDTFNALVTPKGQSESISVEDLALYTSAKHSDKKCNLVKSVELYTDLKFVQDGVQIVDTPGLDDPVVQREEITLEYLSECDLMIHLMNAAQAATQKDIDFIIDALLYRNVAQLLIVITRIDAIAEKELQEVIAYTKRSIEARLNEQNKGAKLDEVIAKIVFIPIAGKLALMHKLGQEKDALALGYDMERTGLPLVEAYLEDVLFGSNSQKANLIISANRKEIESVITESMNTFEQELHYLSISNEEIEHAYAKHQEEKAVMADFLEQIKTSVAQSKEEMEHYFGTLSKFASNQLNKLQDIVKRRITDDVSYEFSKNKKAPKEERIGSIIETAIKDGMVDLVRDYRYEFQKKMQSSLEYMDAKYGEFKTEGTAPMFDAKAFCEEHLGSLLIFKNSTIVIAATNDAIAKYGKNDPSALSMSFETIFGTEFSHIKEMLEEKLHNVNQELLGSFVNLCEAPARVIEERFSTEGVLIEHAMRQMKDQSLNREARILEIKEKERVMGIVLNDLNVQKESK
SIO_010081: SJPD1_RS02520
subclass of: SO_0000673
so part of: SJPD1_RS02520
location: 479375..481747
location: region:479375-481747:1
so has part: feature:479375-481747:1:exon

WP_096045828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479375-481747:1:exon

SJPD1_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02525
old locus tag: SJPD1_0509
so part of: sequence
location: 481744..483768
location: region:481744-483768:1
so has part: feature:481744-483768:1:exon
subclass of: SO_0000010

position:481744:1
position: 481744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483768:1
position: 483768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481744-483768:1:exon

SJPD1_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02525
old locus tag: SJPD1_0509
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768641.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dynamin family protein
translation: MSLLESFVTSYKEHFLKVVPTFDATLLGALKKVQYVLLEEQQLPSIQLKKALDRLQMRSEEPMKVAITGQFSSGKSTFLNALLAKNILPTGITPVTSKVNYIRYGEEFKIRVRYKDGRDEYHDINTIAHFTDQREHVEDIAYLVLYAPLNILKDVVFVDTPGLNSQAASDTQTTEKVLKEVDGIIWLTLIDNAGKMSELQVLEEYLGKYQNKSLCVLNQKDKFTPQQIEETTNYVKTAFKEFFSDVIPISARQALESRSHDKKVMMEETLETFMHDLHVKLENGGEKLDFAQVEHDFKAYQTTLDSILQSDLGANLKLLEESNIDKVLDFIRNEIQPKATQSKEFAITKEIKDITAKLIAQHQLFLSIYDELLGEIIRFEAEAKGLFTELKGKFSHDLKSAFMRIEQIIETIADAIYNQITTVTQIRYEAQKTGLFSKHQSYLPFEYQAPKINSDLIYKSLFYEENLIGKMFKQYVKNLGAIQNEVNDKNRLVYRSLEQGILKWQAPYEVIRKSEELHSDIEFANMRRFASKAYESILKPFNDEIASSYAKISSEFNHLSSAVSFNYQNATEVCVAFLENKIEKSAKLYEENPTKFSLYTPKLDEIKERLRTSFHLYELENMMNTRNTFLNKDYDRLISQFTAIKEEKVAFLEERKARHHKIIGQIETLVKEIV
SIO_010081: SJPD1_RS02525
subclass of: SO_0000673
so part of: SJPD1_RS02525
location: 481744..483768
location: region:481744-483768:1
so has part: feature:481744-483768:1:exon

WP_096045829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481744-483768:1:exon

SJPD1_RS14470
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS14470
old locus tag: SJPD1_0510
so part of: sequence
location: 484036..484197
location: region:484036-484197:1
so has part: feature:484036-484197:1:exon
subclass of: SO_0000010

position:484036:1
position: 484036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484197:1
position: 484197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484036-484197:1:exon

SJPD1_RS14470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS14470
old locus tag: SJPD1_0510
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKSLTFLMLLFIVIMASGCETWHGVKKDTANGAEWSKDKVNDGAKYIEKKTE
SIO_010081: SJPD1_RS14470
subclass of: SO_0000673
so part of: SJPD1_RS14470
location: 484036..484197
location: region:484036-484197:1
so has part: feature:484036-484197:1:exon

WP_167750950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484036-484197:1:exon

SJPD1_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02530
old locus tag: SJPD1_0511
so part of: sequence
location: complement(484271..485311)
location: region:484271-485311:-1
so has part: feature:484271-485311:-1:exon
subclass of: SO_0000010

position:484271:-1
position: 484271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485311:-1
position: 485311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484271-485311:-1:exon

SJPD1_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02530
old locus tag: SJPD1_0511
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856202.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AI-2E family transporter
translation: MNEHRFFLTAIFLAVLFSIIKLYEPFLMIITIASLLAMATYTINLQLYKLTKSKHLSALLSTVFLSILLFGPIVYTITSIGGIVNNFDFSMIERVQTYLRTLDYHLPAPLAFMQSTLDDFISNLNIAQISTTALSYLGSIGKNSAGFLKDMLLIVVFFFFALLNGKDLIDYFKSVMPIEEKEVNFVFSEVTNVMSVVFYSILFSAIFQGALFSFIGMYFGYDGLLLGIFYGFASLIPIVGGALMWIPLCAIEVAHGNTTTAIIIATYSIVVISIIADTFIKPLIIKYINDKMVKTPTAVNELLIFFAIFAGLTTFGFWGMILGPAITTLFLSLLKLYKLLKEKHYM
SIO_010081: SJPD1_RS02530
subclass of: SO_0000673
so part of: SJPD1_RS02530
location: complement(484271..485311)
location: region:484271-485311:-1
so has part: feature:484271-485311:-1:exon

WP_096045830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484271-485311:-1:exon

SJPD1_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: ruvB
locus tag: SJPD1_RS02535
old locus tag: SJPD1_0512
so part of: sequence
location: complement(485308..486330)
location: region:485308-486330:-1
so has part: feature:485308-486330:-1:exon
subclass of: SO_0000010

position:485308:-1
position: 485308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486330:-1
position: 486330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485308-486330:-1:exon

SJPD1_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: ruvB
locus tag: SJPD1_RS02535
old locus tag: SJPD1_0512
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856203.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Holliday junction branch migration DNA helicase RuvB
translation: MERIVEIEKISFENEYEKSLRPSSFEDYIGQEKIKKNLQVFIQAAQKRSECLDHILFFGPPGLGKTTLAHIISNEMRANMKITAAPMIEKSGDLAAILTNLQEGDILFIDEIHRLSPAIEEILYPAMEDFRLDIIIGSGPAAQTIKIDLPHFTLIGATTRAGMISSPLRDRFGMHFRLQFYTKEELSLIITKASHKLEKICQHDAAHEMARRSRGTPRIALRLLKRIRDYADVVDEETISIERAQYGLNELGVNDLGFDELDIKYLELLLQSKGRPLGLSTMAAALSEDEGTIEDVIEPYLLANSYIERTARGRIATAKTYELFRLTPPTLQSALFEDNV
SIO_010081: SJPD1_RS02535
subclass of: SO_0000673
so part of: SJPD1_RS02535
location: complement(485308..486330)
location: region:485308-486330:-1
so has part: feature:485308-486330:-1:exon

WP_096045831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485308-486330:-1:exon

SJPD1_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: panB
locus tag: SJPD1_RS02540
old locus tag: SJPD1_0513
so part of: sequence
location: complement(486336..487124)
location: region:486336-487124:-1
so has part: feature:486336-487124:-1:exon
subclass of: SO_0000010

position:486336:-1
position: 486336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487124:-1
position: 487124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486336-487124:-1:exon

SJPD1_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: panB
locus tag: SJPD1_RS02540
old locus tag: SJPD1_0513
EC number: 2.1.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768644.1
GO function: GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-methyl-2-oxobutanoate hydroxymethyltransferase
translation: MKTITSIKQHKGQTPLTVITAYDALFASLFDQKVDMILVGDSLNMSFNAKPDTLSASMEVMLYHTKAVCAGAKETFIICDMPFGTYTDEKMALHNASLVYSQTNAHAVKIEGGISRAPIIKALTQNSIAVMAHIGLMPQYVRSEGGYKVRGRSEADILSLIEDAKAIEEAGAFSVVIEGVVEEAARRISEAISIPTIGIGAGKYTDGQVLVWSDMLGFFQAFQPKFVKRYLEGATLVQNAVDAYVKEVQERSFPEIPYTYTK
SIO_010081: SJPD1_RS02540
subclass of: SO_0000673
so part of: SJPD1_RS02540
location: complement(486336..487124)
location: region:486336-487124:-1
so has part: feature:486336-487124:-1:exon

WP_096045832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486336-487124:-1:exon

SJPD1_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02545
old locus tag: SJPD1_0514
so part of: sequence
location: 487204..487614
location: region:487204-487614:1
so has part: feature:487204-487614:1:exon
subclass of: SO_0000010

position:487204:1
position: 487204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487614:1
position: 487614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487204-487614:1:exon

SJPD1_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02545
old locus tag: SJPD1_0514
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856205.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hpt domain-containing protein
translation: MGLLAQLEVDFDIEIVGDFISHYAIMCENMEPLIIGLSKKERYVDNIGDLFRIFHNMKSAAGFLKLDPIIKLAVLCEDIAEEARTLQGPASEEFIDWLLLVSDQFERYRKDVENDAAFFTVLNPLIIKVPHTLERE
SIO_010081: SJPD1_RS02545
subclass of: SO_0000673
so part of: SJPD1_RS02545
location: 487204..487614
location: region:487204-487614:1
so has part: feature:487204-487614:1:exon

WP_096045833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487204-487614:1:exon

SJPD1_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: trpA
locus tag: SJPD1_RS02550
old locus tag: SJPD1_0515
so part of: sequence
location: 487611..488351
location: region:487611-488351:1
so has part: feature:487611-488351:1:exon
subclass of: SO_0000010

position:487611:1
position: 487611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488351:1
position: 488351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487611-488351:1:exon

SJPD1_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: trpA
locus tag: SJPD1_RS02550
old locus tag: SJPD1_0515
EC number: 4.2.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768646.1
GO function: GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan synthase subunit alpha
translation: MKQLVAYITAGFPDQNFSLDLVSALKEAGVDKLELGIPFSDPVADGPIIEVANLHALQNGFKMETLFEISSVVAPKIETYWMGYFNPFYHKGVEVFAQKAAEFGVKGFIIPDLPHEEALPYVSLMEQYKLSLISFVAPTDSKERIAKVVKDAKGFIYLVAYAGITGAHSSEDLTKTIQMIKEQSSTPLFVGFGVNEKTAKERARGVDGVIVGSAFVEVLLNEGLSGSEKIAMIAQKAKIIKEKINA
SIO_010081: SJPD1_RS02550
subclass of: SO_0000673
so part of: SJPD1_RS02550
location: 487611..488351
location: region:487611-488351:1
so has part: feature:487611-488351:1:exon

WP_096045834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487611-488351:1:exon

SJPD1_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02555
old locus tag: SJPD1_0516
so part of: sequence
location: complement(488381..488983)
location: region:488381-488983:-1
so has part: feature:488381-488983:-1:exon
subclass of: SO_0000010

position:488381:-1
position: 488381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488983:-1
position: 488983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488381-488983:-1:exon

SJPD1_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02555
old locus tag: SJPD1_0516
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013136331.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKRIFTLLLLSLLCTSPAMALEEQNISSFMQTNIDLATTILRDKKIQKTERSEKLFAIFDLIFDYNLMAQLAIGGKQWSSLAPEKQVEFTKLFEMKLKNSYMEKLDLYTDEKIVIKNLEKIKDTRIHLTTHLMKNSEVYEIIYKFYKDKNGSWMIYDVDILGVSIIQTYRTQFADILAKEPFENLLERLKKPDELTPKKQ
SIO_010081: SJPD1_RS02555
subclass of: SO_0000673
so part of: SJPD1_RS02555
location: complement(488381..488983)
location: region:488381-488983:-1
so has part: feature:488381-488983:-1:exon

WP_096047772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488381-488983:-1:exon

SJPD1_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02560
old locus tag: SJPD1_0517
so part of: sequence
location: complement(488988..489740)
location: region:488988-489740:-1
so has part: feature:488988-489740:-1:exon
subclass of: SO_0000010

position:488988:-1
position: 488988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489740:-1
position: 489740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488988-489740:-1:exon

SJPD1_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02560
old locus tag: SJPD1_0517
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009650790.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VacJ family lipoprotein
translation: MRFILACLLSVSLLSASNIKYLGSDLQSNGDLEAEFNTQNSENLFDPLSGYNEIMTSINDHFYEYLLRPTAQGYAYIVPEMARHGVSNFFENLFFPIRFVNNLLQLKLHNSWEETERFVLNSTMGILGFRDVAGEELGIKAHDEDLGQTLGYYGVGSGFHVVLPLLGPSNVRDIVGLVGDAWLNPINYINDNDPDLFNSSGESLAVTAFYIVNKTSLHVKEYDSFKKDAIELYPFLRNAYESRRNKLISE
SIO_010081: SJPD1_RS02560
subclass of: SO_0000673
so part of: SJPD1_RS02560
location: complement(488988..489740)
location: region:488988-489740:-1
so has part: feature:488988-489740:-1:exon

WP_096045835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488988-489740:-1:exon

SJPD1_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rpsB
locus tag: SJPD1_RS02565
old locus tag: SJPD1_0518
so part of: sequence
location: 489967..490758
location: region:489967-490758:1
so has part: feature:489967-490758:1:exon
subclass of: SO_0000010

position:489967:1
position: 489967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490758:1
position: 490758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489967-490758:1:exon

SJPD1_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rpsB
locus tag: SJPD1_RS02565
old locus tag: SJPD1_0518
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768649.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S2
translation: MVTMKDLLECGVHFGHQTRRWNPKMKKFIFGERKNIYIVDLQKTLRYFRYTYNVVKDAAAEGKTMLFVGTKKQASQAIKEYAEKCGMPYVNHRWLGGMLTNYQTIRQSIRKLDIIEKMEEDGQIDLLTKKEALMLRRKKEKLLDYLGGIRNMKNLPDMIFVIDTVKEKIAVQEARRLGITVVAPLDTNCDPDVVDLPIPGNDDAIRSIQLFCKEMCEAMTEGYEIRSKDAPATEEVADISEDEKKELIEEVVSEEEFAVEAGE
SIO_010081: SJPD1_RS02565
subclass of: SO_0000673
so part of: SJPD1_RS02565
location: 489967..490758
location: region:489967-490758:1
so has part: feature:489967-490758:1:exon

WP_096045836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489967-490758:1:exon

SJPD1_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: tsf
locus tag: SJPD1_RS02570
old locus tag: SJPD1_0519
so part of: sequence
location: 490758..491825
location: region:490758-491825:1
so has part: feature:490758-491825:1:exon
subclass of: SO_0000010

position:491825:1
position: 491825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490758-491825:1:exon

SJPD1_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: tsf
locus tag: SJPD1_RS02570
old locus tag: SJPD1_0519
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768650.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor Ts
translation: MAEITAALVKELRESTGAGMMDCKKALVDTDGDFEAAKDLLREKGLGKAAKKADRLASEGLVNVFVDPSLKIATVSEINAETDFVAKNEGFINLTKDTTAHIQATNVETTEELMKTTINGTVFEEYFATKVATIGENLVVRRFATLKAGANGVVNGYVHSNGRVGVLIAANCDSEKTAAAVGEFIRNLCMHAAAMKPSFLSYTELDPEFVEKETIGIKADIEKENEELSRLKKPLKRMPLFVSRVQLNDAVLENAKKEMEAELKAQGKPEKIWDKIIPGQLERFIADNTQLDQQYTLLSQFYVMDDKKTIAHVVEEKAKELGGKIELVGYVRFELGEGLEKKACDFASEVAEQLK
SIO_010081: SJPD1_RS02570
subclass of: SO_0000673
so part of: SJPD1_RS02570
location: 490758..491825
location: region:490758-491825:1
so has part: feature:490758-491825:1:exon

WP_096045837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490758-491825:1:exon

SJPD1_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02575
old locus tag: SJPD1_0520
so part of: sequence
location: 491884..492528
location: region:491884-492528:1
so has part: feature:491884-492528:1:exon
subclass of: SO_0000010

position:491884:1
position: 491884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492528:1
position: 492528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491884-492528:1:exon

SJPD1_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02575
old locus tag: SJPD1_0520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768651.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSLLQVQNISHAFDYLLFENVNFTLEPKESMAILGVSGSGKSTLLHICSTLLHPNHGEVILCDHNIYNDNDDARLKLRRYDVGIIFQSHYLFKGFFANENIELASFISDKKIDNGILERLGIADFMHYRVGDLSGGQQQRVSIARVLAKKPRIIFADEPTGNLDDKTAQEVMNVLFEYIEKENAALLLVTHNQQLAKQCTYMKHLHLDGLKEDA
SIO_010081: SJPD1_RS02575
subclass of: SO_0000673
so part of: SJPD1_RS02575
location: 491884..492528
location: region:491884-492528:1
so has part: feature:491884-492528:1:exon

WP_096045838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491884-492528:1:exon

SJPD1_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: fliR
locus tag: SJPD1_RS02580
old locus tag: SJPD1_0521
so part of: sequence
location: 492532..493305
location: region:492532-493305:1
so has part: feature:492532-493305:1:exon
subclass of: SO_0000010

position:492532:1
position: 492532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493305:1
position: 493305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492532-493305:1:exon

SJPD1_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: fliR
locus tag: SJPD1_RS02580
old locus tag: SJPD1_0521
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768652.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthetic protein FliR
translation: MESLVKLFGENQVILCFLLFARLSGLFAFFPFFSHANIPLSIKTSMTFFMVIFLYPLLTPLHVTPTLVNLSLAIVGELLIGFVAGLFLTITLSILQMVGMQISFIMGFTMASVVDPQTSTSIPLLSQLLSFIGLMVILAFNGHHQMLLFIADSLNLLPLGSFYPQTNMLAYLAKAVTGMFIYGFTLSFPVVAFSMLLDAVFGMLMKTMPQFNLLVIGFPIKIAVSFVVLVATLTSMMLIFKKEFLEALNHLTILFVR
SIO_010081: SJPD1_RS02580
subclass of: SO_0000673
so part of: SJPD1_RS02580
location: 492532..493305
location: region:492532-493305:1
so has part: feature:492532-493305:1:exon

WP_096045839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492532-493305:1:exon

SJPD1_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02585
old locus tag: SJPD1_0522
so part of: sequence
location: 493367..494815
location: region:493367-494815:1
so has part: feature:493367-494815:1:exon
subclass of: SO_0000010

position:493367:1
position: 493367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494815:1
position: 494815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493367-494815:1:exon

SJPD1_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02585
old locus tag: SJPD1_0522
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768653.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLLLLNNNPAVSRLIKLSAEKAGYELDEFEDYGLVPLTTYDVILVDNELYDEASIVGACENTGCDYIIYICQRGAKKPDIAHVALEKPFLPTDFLVLLEKVKNVIISHKAEATEEATKVLQSLDESEKSTAFDIDQIDTLEDEDEDEDNTLPINLLEEPDDFEKEEDEKELTFDEIEAEDLGLEQELSLDDIVDKDDEDKELKIDDEFSFDELDSLEKEEVSSLEDFDFDEGNTTSLTPAETEDEREEEFANPSILDKDDINEVKQLLDESEEEAEEEEISELSLDAFDLDKENEEAGKFFFDDVEKEDESLEKDDMEKSLNLELDDVTSLDFEEAAPVGEEEEEDQSIEIPEEQEEIIDDFAEGIEEKIEEEEKELAQEEDILIPQVDVAFDALAQNGDIDSLDDLNENLLKKAFGEEVNEEESTPISVPEEKGEKIEVIRGEIESSIARSISGLAQSDILREALKGMRINISITFDEKE
SIO_010081: SJPD1_RS02585
subclass of: SO_0000673
so part of: SJPD1_RS02585
location: 493367..494815
location: region:493367-494815:1
so has part: feature:493367-494815:1:exon

WP_096045840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493367-494815:1:exon

SJPD1_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: gmk
locus tag: SJPD1_RS02590
old locus tag: SJPD1_0523
so part of: sequence
location: 494815..495432
location: region:494815-495432:1
so has part: feature:494815-495432:1:exon
subclass of: SO_0000010

position:495432:1
position: 495432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494815-495432:1:exon

SJPD1_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: gmk
locus tag: SJPD1_RS02590
old locus tag: SJPD1_0523
EC number: 2.7.4.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856214.1
GO function: GO:0004385 - guanylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: guanylate kinase
translation: MVKGNLLVISGPSGSGKSSLMKEVINEISDSYFSISSTTRAIREGEIDGINYHFISKEDFEKDIDAGFFLEWAKVHDNYYGTSLKPILKELHEGKLVICDIDVQGHKIAREKFGNLITSVFITTPDQKSLKERLIHRGTDSQEIIEKRLANAVSEMTRIREYDYVLINDDFKIALHDMLAIAYASRKKMELMDLGEFISSWANID
SIO_010081: SJPD1_RS02590
subclass of: SO_0000673
so part of: SJPD1_RS02590
location: 494815..495432
location: region:494815-495432:1
so has part: feature:494815-495432:1:exon

WP_096045841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494815-495432:1:exon

SJPD1_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: tatA
locus tag: SJPD1_RS02595
old locus tag: SJPD1_0524
so part of: sequence
location: 495507..495752
location: region:495507-495752:1
so has part: feature:495507-495752:1:exon
subclass of: SO_0000010

position:495507:1
position: 495507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495752:1
position: 495752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495507-495752:1:exon

SJPD1_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: tatA
locus tag: SJPD1_RS02595
old locus tag: SJPD1_0524
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856215.1
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin-arginine translocase TatA/TatE family subunit
translation: MGSFSISHWLVILAVVVLLFGAKKIPELAKGVGQGIKDFKKAIKEDEEAKTTVDKVEVKPEAGATPTATTTAAPADEKKSV
SIO_010081: SJPD1_RS02595
subclass of: SO_0000673
so part of: SJPD1_RS02595
location: 495507..495752
location: region:495507-495752:1
so has part: feature:495507-495752:1:exon

WP_088437219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495507-495752:1:exon

SJPD1_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: argS
locus tag: SJPD1_RS02600
old locus tag: SJPD1_0525
so part of: sequence
location: 495762..497348
location: region:495762-497348:1
so has part: feature:495762-497348:1:exon
subclass of: SO_0000010

position:495762:1
position: 495762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497348:1
position: 497348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495762-497348:1:exon

SJPD1_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: argS
locus tag: SJPD1_RS02600
old locus tag: SJPD1_0525
EC number: 6.1.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011991873.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine--tRNA ligase
translation: MKKSVIRAIKETLQREFVLEKPTNLSFGHYATPIAFSLAKELKKSPIAIAEEICQKFTIGEIFQEVTPIKGYINFKLSESFLDQYATWTIQNEALFGSDEQNESILLEYVSANPTGPLHIGHARGAVIGDALARIGKHLGYKITTEYYVNDAGNQVDLLGLSLYLSGREHILGFPVEWPEEFYRGEYIIDLAHVASAELGKAIFEDEANIPLLSVWGKDKMLELIKSNLADVGIEFEQFVSEKSLYNKWDESFAKLQKSDKTYTEGGKVWIRSTELGDEKDRVVVREDGRPTYLAGDIIYHDNKFQRGYDSYINIWGADHHGYITRVKAAIHFLGYDEQKLEVILAQMVSLLKGGEPYKMSKRAGNFILMSDVVNEVGSDALRFVFLSKKSDTHLEFDVDVFKQEDSNNPIFYINYAHARINQIFAKAEKTLADVQNVKLENLSEEAQNLLFSALLLPEVLEDTFSSRQVQKLTEYLKSLAAALHKFYNENRVVGSEDEEKFLKLFAVVGLSLRVGLKLIGINAKDKM
SIO_010081: SJPD1_RS02600
subclass of: SO_0000673
so part of: SJPD1_RS02600
location: 495762..497348
location: region:495762-497348:1
so has part: feature:495762-497348:1:exon

WP_096045842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495762-497348:1:exon

SJPD1_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02605
old locus tag: SJPD1_0526
so part of: sequence
location: 497358..498194
location: region:497358-498194:1
so has part: feature:497358-498194:1:exon
subclass of: SO_0000010

position:497358:1
position: 497358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498194:1
position: 498194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497358-498194:1:exon

SJPD1_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02605
old locus tag: SJPD1_0526
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768657.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA/RNA non-specific endonuclease
translation: MNRSHFIASFLSFLIKNPKAFLLAFLLGGLSYSYEFFIARDTMVFQGIPKAIENSLHTYTRIFRNRAYMVGYSDLKGNPLWVVYKLTPPSQNVSPLKRPDSFNADWRNMGFITSSDYTNSGYDRGHMAPNHAMALLYGKEAQEETFLMTNITPQKPTLNQKLWQHLEAIELESFAPKFKELWVYTGPLFDLKTTRLKSSYFIEIPDAFYKIYVGIEHSGEIKTLSFIIPQNAKGNDHLEKYLVSIDEVEHRSGFDFLHKLDDKIENVLEKKIDQSSWF
SIO_010081: SJPD1_RS02605
subclass of: SO_0000673
so part of: SJPD1_RS02605
location: 497358..498194
location: region:497358-498194:1
so has part: feature:497358-498194:1:exon

WP_096045843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497358-498194:1:exon

SJPD1_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02610
old locus tag: SJPD1_0527
so part of: sequence
location: complement(498213..500120)
location: region:498213-500120:-1
so has part: feature:498213-500120:-1:exon
subclass of: SO_0000010

position:498213:-1
position: 498213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500120:-1
position: 500120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498213-500120:-1:exon

SJPD1_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02610
old locus tag: SJPD1_0527
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MDSDKLFLKYPFYFIIPTFIIATILALLLFSTVNLEKSIEKKLFEISISDVFSITNNSASSIQSLLKESTDYTSDIKLNSALQHKIEERLKILITPNIKYAYLLYRDSRGVFRFLGDASKHEDKAFIDQKFDADSPEWLDIYAQKKALIIRHSMLQQLSMSYLVPIMYQNNVELILAIDFSIQKIEEINQIIHMIQNGIFAVMAVIFIILLFVIIQAIRFRAVKKTAFIDKLTNVYNRNYLQKYEDFINLNDYILATLDIDYFKKVNDTYGHDAGDKVLKQVADTILLAIRHKDDIVIRYGGEEFLILAKTRRDDHLSALNVIERISHTIQETRFHISPNESINVTVSIGVNLVPYKSRTFSEAFKLADIALYNAKNKGRNTIDIYDENEYTQDVCLSLNEIKAAIEENRILCYYQAIVDTQTQKLSHYEALLRIIDKNGSIILPEKILPTIRGTFVLRNITKEVLRICYEQLIEKPSIAININLNPHDIIDEAILTLLKSYAKQKNIAHRMGLEIIESEEITHRDDAKNNLLMLKRLGYRILIDDFGSGYSNFIYLTEIKTDFIKIDGTIIQKILDDKISFLLVKNIVSFAKEAHIKVIAEYVSNEMIYDKIKSLGIEYSQGLFFAEPTPTIAS
SIO_010081: SJPD1_RS02610
subclass of: SO_0000673
so part of: SJPD1_RS02610
location: complement(498213..500120)
location: region:498213-500120:-1
so has part: feature:498213-500120:-1:exon

WP_096045844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498213-500120:-1:exon

SJPD1_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02615
old locus tag: SJPD1_0528
so part of: sequence
location: complement(500122..500577)
location: region:500122-500577:-1
so has part: feature:500122-500577:-1:exon
subclass of: SO_0000010

position:500122:-1
position: 500122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500577:-1
position: 500577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500122-500577:-1:exon

SJPD1_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02615
old locus tag: SJPD1_0528
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013136065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRLILLLTFFGLLSAENYTFLVQPYSKEIELEAKIISEIATSSLHEEIKLFIPNMSEMERKVYSQYFTLTQKCETSNFVFVNKTVERETLCDNTKRLFFTNNYRKLLSDDKYYGALFWNKSRPNIVFIKNRLDKKAIVLPQTFNQFIEGI
SIO_010081: SJPD1_RS02615
subclass of: SO_0000673
so part of: SJPD1_RS02615
location: complement(500122..500577)
location: region:500122-500577:-1
so has part: feature:500122-500577:-1:exon

WP_096045845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500122-500577:-1:exon

SJPD1_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02620
old locus tag: SJPD1_0529
so part of: sequence
location: complement(500577..502484)
location: region:500577-502484:-1
so has part: feature:500577-502484:-1:exon
subclass of: SO_0000010

position:502484:-1
position: 502484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500577-502484:-1:exon

SJPD1_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02620
old locus tag: SJPD1_0529
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013136066.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MKIILLIALSVGLLLADSLDSLLQEYKTTSDNSLQTVNEKIGHVIIYSQKEIRLMQYTKLNDILKELPLLNVNTNQFGLTNYSLIGSKTTTSGFFRFFINDHEISSGYDQSTSLSWSDLPLDFVDHVEIYYGESSFSFGNETGIYFVRIYTKSALKENGSELNGLVTTKGSHSESFTNSSSLENGWSYLMFLNHEQIKHTTLYDGHKLNTNGDKKYLYTDISNETTKINMGYTDVSKNNYAGLALDATPDSGQNLSKDFFINYTHYFLDDKSLKANLSVDVNDRSYDEANTQGIGLIPVLNFSNLGATIPKNFNEDLRFVKTNAYLSKSFDVEDNTFIAALNVKNKTYDVQNRETTNFMNQTRNVGNYNAFDEETTSSVLFQDNYKLNDTLILVANAKLDSYDRNAYLQDSTETLLRVGAIYTPTENWGFKSFYTQTALPPSFYNVDYADRTKPNLKSQQYYIYTLEAVYTKGDSKFGINYNHVDMDNFLYLTPVGFINIDRTITTNGLIFDYEYSFSDRDKIKLNYYTSNLSETVNNSTKGGFIKFMGGYQKFDYFTSVIYRNGYEYLNLDIPDSFDMSLGATYHVTKDLSYSIKASNILDKSTKSLYLENFGRTNFALDDNDRSVTFSFRWVF
SIO_010081: SJPD1_RS02620
subclass of: SO_0000673
so part of: SJPD1_RS02620
location: complement(500577..502484)
location: region:500577-502484:-1
so has part: feature:500577-502484:-1:exon

WP_096045846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500577-502484:-1:exon

SJPD1_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nadD
locus tag: SJPD1_RS02625
old locus tag: SJPD1_0530
so part of: sequence
location: complement(502674..503555)
location: region:502674-503555:-1
so has part: feature:502674-503555:-1:exon
subclass of: SO_0000010

position:502674:-1
position: 502674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503555:-1
position: 503555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502674-503555:-1:exon

SJPD1_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nadD
locus tag: SJPD1_RS02625
old locus tag: SJPD1_0530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856223.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nicotinate (nicotinamide) nucleotide adenylyltransferase
translation: MNIAIFGGSFDPPHSGHELIVKKALEILDIDKLLVVTTYLSPFKESFCAPAAMRQKWLAKMFEGMEKVEIFSYECDQKRQVPTIETVLHVKRLYPGAKLFLLVGSDSFSALPKWNRYDELCNLVEFVVAPRGEFTPPKGLKILPINVNISSSKLRSFLDPRFIPKAIKNEVIAFYTRNPMDNRIERIVTALSDKKAEDIQVFDMSGKDYFVNTVVIATTMGERHGLSLLDHLKTELKGAGESFLNVDADDNWTVIDMGDVLIHLMTPQYRLKYNLELFLKEREEEMKKVRSVE
SIO_010081: SJPD1_RS02625
subclass of: SO_0000673
so part of: SJPD1_RS02625
location: complement(502674..503555)
location: region:502674-503555:-1
so has part: feature:502674-503555:-1:exon

WP_096045847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502674-503555:-1:exon

SJPD1_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: gap
locus tag: SJPD1_RS02630
old locus tag: SJPD1_0531
so part of: sequence
location: 503667..504668
location: region:503667-504668:1
so has part: feature:503667-504668:1:exon
subclass of: SO_0000010

position:503667:1
position: 503667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504668:1
position: 504668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503667-504668:1:exon

SJPD1_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: gap
locus tag: SJPD1_RS02630
old locus tag: SJPD1_0531
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768664.1
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I glyceraldehyde-3-phosphate dehydrogenase
translation: MALKIAINGFGRIGRCVARIIDSRDDVELVCVNDTAERATTKQLLKYDSVHGVFQGHVELLENDYMQMGKSKVKMFSTRDAKELNFADYGVDVVLECTGALLTQKDMQVFIDNGVKKVVLSAPAKDDTPTFVLGVNEHTYAGQAIVSNASCTTNCLGPVAKVLDDAFGIDKGLMTTVHSYTNDQNILDVKHRKNDLRRARAAAVNMIPTSTGAAKAIGLVLPHLKGRLHGQSVRVPTPNVSMVDLNVVLKKETTKEEINALFTEHANGKLKGILEVDVEQRVSQDFVTTSWSSIVAVDLTQVICGNMVKVMAWYDNEWGYSTRLIDMAVHVSK
SIO_010081: SJPD1_RS02630
subclass of: SO_0000673
so part of: SJPD1_RS02630
location: 503667..504668
location: region:503667-504668:1
so has part: feature:503667-504668:1:exon

WP_096045848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503667-504668:1:exon

SJPD1_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02635
old locus tag: SJPD1_0532
so part of: sequence
location: 504680..505879
location: region:504680-505879:1
so has part: feature:504680-505879:1:exon
subclass of: SO_0000010

position:504680:1
position: 504680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505879:1
position: 505879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504680-505879:1:exon

SJPD1_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02635
old locus tag: SJPD1_0532
EC number: 2.7.2.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012661157.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglycerate kinase
translation: MIRSIRDLDIEGKKVFIRCDFNVPLDEFTNITDDRRVRSAIPTIRYCLDHGCSIILASHLGRPKGAVDEKYSLAPVQMRLKRLLDKEVVLAADVIGKDATEKAAALQPGEILLLENLRFSKGETANDEEFAKALADMAEVYINDAFGVCHRAHASVEAITHYFNEKSSAAGFLLQKEVEFSKNLLRRPTRPFVAVVGGSKVSGKLQALVNLLPRVDKLVIGGGMAFTFLKAQGLDIGNSIVEDELLDEANRVMEEAKRLGVKIYLPVDVVAAQTCSQDATIKFVTVQEIPKGWMGLDIGPATSRLFREALADAQTILWNGPMGVFELEKFSKGSFKMSHVIAEAHATTVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVKVLSKDETE
SIO_010081: SJPD1_RS02635
subclass of: SO_0000673
so part of: SJPD1_RS02635
location: 504680..505879
location: region:504680-505879:1
so has part: feature:504680-505879:1:exon

WP_096045849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504680-505879:1:exon

SJPD1_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02640
old locus tag: SJPD1_0533
so part of: sequence
location: 505882..506595
location: region:505882-506595:1
so has part: feature:505882-506595:1:exon
subclass of: SO_0000010

position:505882:1
position: 505882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506595:1
position: 506595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505882-506595:1:exon

SJPD1_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02640
old locus tag: SJPD1_0533
EC number: 5.3.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768666.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: triose-phosphate isomerase
translation: MIIASNFKTNYTRGAAKAFIQEIQAFISNTKSEQQVRIFAPFTALDHFDEVSTLKVGAQNFYPVQSGSYTGEIGFEQLEEFGIDTVLIGHSERRHILKESQSFIAAKYDFAKAREVEIVYCIGEPAEIRVQGIDAVMSYLWEQFEGIEINYDKLIIAYEPVWAIGTGLSASLEDIEEVLTRLREKLCTPLLYGGSVKVDNINTILHVKACDGVLVGTASWNEKAFCEMIHIADNVTK
SIO_010081: SJPD1_RS02640
subclass of: SO_0000673
so part of: SJPD1_RS02640
location: 505882..506595
location: region:505882-506595:1
so has part: feature:505882-506595:1:exon

WP_096045850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505882-506595:1:exon

SJPD1_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: fabI
locus tag: SJPD1_RS02645
old locus tag: SJPD1_0534
so part of: sequence
location: 506609..507430
location: region:506609-507430:1
so has part: feature:506609-507430:1:exon
subclass of: SO_0000010

position:506609:1
position: 506609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507430:1
position: 507430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506609-507430:1:exon

SJPD1_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: fabI
locus tag: SJPD1_RS02645
old locus tag: SJPD1_0534
EC number: 1.3.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018136998.1
GO function: GO:0004318 - enoyl-[acyl-carrier-protein] reductase (NADH) activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enoyl-ACP reductase FabI
translation: MIMKGKKGLIVGIANNKSIAYGIAKACKEQGAELAFTYLNEQLEKRVRPIAEEFGCDKVYELDINNPAHLEALTASLEKDFGKIDFVVHSVAYAPKEALTGRFVDTTKEAFDIALGTSAYSLVSLSRACLPAMNDNGSILTLTYLGGPRYVPHYNVMGVAKAALESCVRYLAVDLGRRGIRVNAISAGPIKTLAASGIGDFRMILNWNEINAPLRKNVTTDEVGNSGMYLLSDLSSCVTGEVHYVDAGYSIMGMGMDETDAEGHTVLAWDNQK
SIO_010081: SJPD1_RS02645
subclass of: SO_0000673
so part of: SJPD1_RS02645
location: 506609..507430
location: region:506609-507430:1
so has part: feature:506609-507430:1:exon

WP_096045851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506609-507430:1:exon

SJPD1_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02650
old locus tag: SJPD1_0535
so part of: sequence
location: 507440..508405
location: region:507440-508405:1
so has part: feature:507440-508405:1:exon
subclass of: SO_0000010

position:507440:1
position: 507440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508405:1
position: 508405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507440-508405:1:exon

SJPD1_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02650
old locus tag: SJPD1_0535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012012087.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MKLVLQKLGYVVLMLCIISLISFGAIHLAPNSFFASGELNPNITPEALEQLKHVYGLDQSLPAQFFAWFKAMLQLDFGISFASGKAVRDEILERLPITLLMNVVSLIFVFILALYWGIKSAMKQSSLYDKSIKQFALISYAMPSFYLSLLLVILLSVQWKLFPISGLHSQGISGNGIVYMADMAWHLALPIFVMVFGGLGSLILYVRSLTLNILKSDYIFFAKSRGIEGRALLMRFILPNLSPPIVTILGLSLPGLIGGSVILESIFAINGMGLLFYQSALSRDYPVIMGILIISSFLTLFGNMIADLILTKLNPHFKRRG
SIO_010081: SJPD1_RS02650
subclass of: SO_0000673
so part of: SJPD1_RS02650
location: 507440..508405
location: region:507440-508405:1
so has part: feature:507440-508405:1:exon

WP_096045852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507440-508405:1:exon

SJPD1_RS14475
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS14475
old locus tag: SJPD1_0536
so part of: sequence
location: 508428..508580
location: region:508428-508580:1
so has part: feature:508428-508580:1:exon
subclass of: SO_0000010

position:508428:1
position: 508428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508580:1
position: 508580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508428-508580:1:exon

SJPD1_RS14475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS14475
old locus tag: SJPD1_0536
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004321784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNILLVLVTVLLMSGCATWGGIKKDAKDGAQWTKEKVNHGAEYVKEKTE
SIO_010081: SJPD1_RS14475
subclass of: SO_0000673
so part of: SJPD1_RS14475
location: 508428..508580
location: region:508428-508580:1
so has part: feature:508428-508580:1:exon

WP_167750141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508428-508580:1:exon

SJPD1_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: nusA
locus tag: SJPD1_RS02655
old locus tag: SJPD1_0537
so part of: sequence
location: complement(508636..509760)
location: region:508636-509760:-1
so has part: feature:508636-509760:-1:exon
subclass of: SO_0000010

position:508636:-1
position: 508636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509760:-1
position: 509760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508636-509760:-1:exon

SJPD1_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: nusA
locus tag: SJPD1_RS02655
old locus tag: SJPD1_0537
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856230.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor NusA
translation: MEKIIDIIESIAHEKGLDINEVKNTVTLALVKTAKRIYGAEYEYGAEIDPATKTLKLYQKVIVVEPDDTRLLEGNENFIAIKDAKEVDPEIEIGDELTYELPLDNLGRTAAATLQKELEYHIQRLLENNIFEKYQKLVGKTVFGSVVRVDNDENTYIEIEEIRAVLPRKNRIKGEKFKVGNVVKSVIRKVLIDKTQGMYVELSRTSPKFLESLLELEVPEIKDELIKIIGSARIPGERAKVALSSLHPNIDAVGATVGTKGVRINAVSKELHNENIDCIEYSNIPEIFIARALSPAIISNVKIQNGKAIVTLPSDQKSKAIGKNGINIRLTSMLTGFEIELVESGGTTANSDASSDEQAEQRDPNALKNLFGGL
SIO_010081: SJPD1_RS02655
subclass of: SO_0000673
so part of: SJPD1_RS02655
location: complement(508636..509760)
location: region:508636-509760:-1
so has part: feature:508636-509760:-1:exon

WP_096045853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508636-509760:-1:exon

SJPD1_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02660
old locus tag: SJPD1_0538
so part of: sequence
location: 510012..510254
location: region:510012-510254:1
so has part: feature:510012-510254:1:exon
subclass of: SO_0000010

position:510012:1
position: 510012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510254:1
position: 510254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510012-510254:1:exon

SJPD1_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02660
old locus tag: SJPD1_0538
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002851103.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HP0268 family nuclease
translation: MEIKLARNEINGKPKTITLEKVTEIIEKEGQKIFYFDKENSHKDLVSLVEHFEAQGFSVYLRDIRYGLGESDYMYEVHIL
SIO_010081: SJPD1_RS02660
subclass of: SO_0000673
so part of: SJPD1_RS02660
location: 510012..510254
location: region:510012-510254:1
so has part: feature:510012-510254:1:exon

WP_087437777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510012-510254:1:exon

SJPD1_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: miaB
locus tag: SJPD1_RS02665
old locus tag: SJPD1_0539
so part of: sequence
location: 510270..511580
location: region:510270-511580:1
so has part: feature:510270-511580:1:exon
subclass of: SO_0000010

position:510270:1
position: 510270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511580:1
position: 511580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510270-511580:1:exon

SJPD1_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: miaB
locus tag: SJPD1_RS02665
old locus tag: SJPD1_0539
EC number: 2.8.4.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768672.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
translation: MLEEKKLYIETLGCAMNVRDSEHIIAELGDKENYVLTNSLQEADLILVNTCSVREKPVSKLFSEIGKYNLQKKEGAKIGVCGCTASHLGKEIFRRAPYVSFVIGARNVSKISTAVNTEKFLSVDTDYDESTYAFGEYRNSLYKAYVNISIGCDKKCTYCIVPQTRGDEISIPAELIVNEARKAAQNGAKEIFLLGQNVNNYGRRFSGNVERSMDFSDLLNLISEIPEVERIRFTSPHPLHMDDKFLETFANNPKVCKSMHMPLQSGSTHILEQMKRGYSKEWFLNRALKLREMIPDVSISTDIIVAFPGESDADFEDTLDVMRHVKFEQIFAFKYSPRPLTKAAEFTNQIDSEVGSQRLERLQLLQDEILDEIAAKNLNKIYPVYIDELRNSGFLAGRSDNNALVQIKGDESLLGQTVNIKITNPKRLSLYGEIVL
SIO_010081: SJPD1_RS02665
subclass of: SO_0000673
so part of: SJPD1_RS02665
location: 510270..511580
location: region:510270-511580:1
so has part: feature:510270-511580:1:exon

WP_226372279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510270-511580:1:exon

SJPD1_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02670
old locus tag: SJPD1_0540
so part of: sequence
location: 511561..512196
location: region:511561-512196:1
so has part: feature:511561-512196:1:exon
subclass of: SO_0000010

position:511561:1
position: 511561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512196:1
position: 512196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511561-512196:1:exon

SJPD1_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02670
old locus tag: SJPD1_0540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768673.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysophospholipid acyltransferase family protein
translation: MAKLFSKEFKRKLLVWIVPPLIYALIKLLFFTCKKKFYRPQNGSATPSIYVLWHGEILMAAAAYTYYTKRVEADTIVSSHFDGELAARLMQLFGGGTIRGSSSKGGASVLRQALKSLQKGRDIALTPDGPRGPRHSVADGAAVLAMMKKVPIITMNCNPTSYWSMKSWDHFCIPKPFCTIEFYFGNPFYVHELSLEEAKSLIQKRLLEHAV
SIO_010081: SJPD1_RS02670
subclass of: SO_0000673
so part of: SJPD1_RS02670
location: 511561..512196
location: region:511561-512196:1
so has part: feature:511561-512196:1:exon

WP_096045855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511561-512196:1:exon

SJPD1_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02675
old locus tag: SJPD1_0541
so part of: sequence
location: 512321..513400
location: region:512321-513400:1
so has part: feature:512321-513400:1:exon
subclass of: SO_0000010

position:512321:1
position: 512321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513400:1
position: 513400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512321-513400:1:exon

SJPD1_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02675
old locus tag: SJPD1_0541
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856234.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGIRTVLQKKFQNLFVAIVLSETECTLSCKVLKNGAIIRTFSKTFELTPPLDALDKSLENYLISLQEEYQFVYIAFLLSSLGQGAISGTGNTSFHKHNVDLQNVHHVAMFNQWSAYASYIEIKWAKNLFSEVGLDLVYSPFIILSDFVVSQKLKNKPTCYILNCQDFFVLAIFEAKQLHFGAFFKTQSDISFTRSNDVNDWENEQEEDDIVSSDEMPEISAEEHEDTEHEGIEELSEFGELGELEDIDDLRSTDSFSDIDDKAISPYKEMKDVKEEDMSLELYGRDLLVYKYLKSSLEEYYHNPLYVSEFIDEIIIFDGYEISSDLIRQLEDELMMDVEIHKVDVSDRMCDIAIKEVFK
SIO_010081: SJPD1_RS02675
subclass of: SO_0000673
so part of: SJPD1_RS02675
location: 512321..513400
location: region:512321-513400:1
so has part: feature:512321-513400:1:exon

WP_096045856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512321-513400:1:exon

SJPD1_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02680
old locus tag: SJPD1_0542
so part of: sequence
location: 513397..513918
location: region:513397-513918:1
so has part: feature:513397-513918:1:exon
subclass of: SO_0000010

position:513397:1
position: 513397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513918:1
position: 513918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513397-513918:1:exon

SJPD1_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02680
old locus tag: SJPD1_0542
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLSFIAPRAKPFFSLFSKMWLVFISLMSCFMIIFNFYIVIEMSSFKHGVVDLTKEREMLEKKIDEDDESIGLILRQKAISEEIFSNNTLLKESMKNLFDLVPDQITLNKVQMERNSLILYGVSPTQDTFNFLLAAPLKSIFHTSNTTFYLTKEGWYNFVSINKILGEDGFRE
SIO_010081: SJPD1_RS02680
subclass of: SO_0000673
so part of: SJPD1_RS02680
location: 513397..513918
location: region:513397-513918:1
so has part: feature:513397-513918:1:exon

WP_087437781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513397-513918:1:exon

SJPD1_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02685
old locus tag: SJPD1_0543
so part of: sequence
location: 513911..514450
location: region:513911-514450:1
so has part: feature:513911-514450:1:exon
subclass of: SO_0000010

position:513911:1
position: 513911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514450:1
position: 514450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513911-514450:1:exon

SJPD1_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02685
old locus tag: SJPD1_0543
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856236.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSLDRSLEKIDIMKLLIFLMVFIIITFSFVFLLIIPNVKEHRVLQAEYKRVLVHKTRVENLFLEREAELSKLKAENVHIMSAFKHPFTQEEFIRYAGTFFKQVSLTEVTKSDYKKEFVEYELNVTSTLKTPTNFYNFLEGLNRYSSIVQADFPIHLESGKENISSTFKIKVYDLNATR
SIO_010081: SJPD1_RS02685
subclass of: SO_0000673
so part of: SJPD1_RS02685
location: 513911..514450
location: region:513911-514450:1
so has part: feature:513911-514450:1:exon

WP_087437782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513911-514450:1:exon

SJPD1_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: tilS
locus tag: SJPD1_RS02690
old locus tag: SJPD1_0544
so part of: sequence
location: complement(514419..515423)
location: region:514419-515423:-1
so has part: feature:514419-515423:-1:exon
subclass of: SO_0000010

position:514419:-1
position: 514419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515423:-1
position: 515423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514419-515423:-1:exon

SJPD1_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: tilS
locus tag: SJPD1_RS02690
old locus tag: SJPD1_0544
EC number: 6.3.4.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768677.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MQPLPLLHNATIDLLKTSKNLLAFSGGGDSTALFFLLLEQNIPFDIAHVNYQTREQSDVEEAYAKKLADTYNKQLFTFTCKLENANFEHSARKERYTFFENIIQEHGYNSLLSAHHLNDKLEWFLMQLTRGAGLVELLGMQEIEEREHYTMIRPLLHVNKKTLQAYLENYKITYFTDESNTSFKHVRNQFRHHYANPLIENYEEGIAKSFRYMEEDAKRLLPHQATRIKDLFLLPKDEDDLINIRHIDKIVKLLGILLSKAQRDEILKTKSCVVGGKIAVCFEEKMILIAPYLKQAMDKKFKERCRQARIPSKIRSYLFTSHIDLSALRLDHTL
SIO_010081: SJPD1_RS02690
subclass of: SO_0000673
so part of: SJPD1_RS02690
location: complement(514419..515423)
location: region:514419-515423:-1
so has part: feature:514419-515423:-1:exon

WP_096045857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514419-515423:-1:exon

SJPD1_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rimO
locus tag: SJPD1_RS02695
old locus tag: SJPD1_0545
so part of: sequence
location: complement(515398..516708)
location: region:515398-516708:-1
so has part: feature:515398-516708:-1:exon
subclass of: SO_0000010

position:515398:-1
position: 515398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516708:-1
position: 516708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515398-516708:-1:exon

SJPD1_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rimO
locus tag: SJPD1_RS02695
old locus tag: SJPD1_0545
EC number: 2.8.4.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768678.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO process: GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12 methylthiotransferase RimO
translation: MKKLHLVSLGCNKNLVDSEVMLGKLQAYEMCDDPSQADVLIVNTCGFIGPAKEESLNTIFSLHEARKKGSLLVMAGCLTERYKEDLTKELKEVDLFTGVGDYDKIDEIIALRQNRFSPATYLLNEEERIITGSNAHAYVKLSEGCNQACSFCAIPGFKGKLHSRTLESLVKEVKALVSKGFYDFSFISQDSSSFLRDVGEKEGLIKLIEAVEQIEGVKSARILYLYPTTTSNALIERIISSPLFHNYFDMPIQHISDSMLKRMKRGAGRERIIEQLNLMRQAPNSFIRTSFIVGHPGESEAEFQELLDFTKTFDFDRVNIFAYSDEEDTSAYEMDEKIDTKTINKRIKQLDKLVQAKTKKSFEKEVGKEVIILVEGESSEHEFFMGARELLWAPSIDGEVLVNDSDIENIEVGLCYRATITECAGDQLIATITSVA
SIO_010081: SJPD1_RS02695
subclass of: SO_0000673
so part of: SJPD1_RS02695
location: complement(515398..516708)
location: region:515398-516708:-1
so has part: feature:515398-516708:-1:exon

WP_096045858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515398-516708:-1:exon

SJPD1_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: panC
locus tag: SJPD1_RS02700
old locus tag: SJPD1_0546
so part of: sequence
location: complement(516717..517538)
location: region:516717-517538:-1
so has part: feature:516717-517538:-1:exon
subclass of: SO_0000010

position:516717:-1
position: 516717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517538:-1
position: 517538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516717-517538:-1:exon

SJPD1_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: panC
locus tag: SJPD1_RS02700
old locus tag: SJPD1_0546
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009651303.1
GO function: GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pantoate--beta-alanine ligase
translation: MKIVKTIDELKLARSELKGTIGFVPTMGALHNGHLSLMQNAVAQNDHAIVSVFVNPTQFLVGEDFNTYPKRTQADIKICELAGVSILFMPTPEVMYSSLEPSILAPSAKAYILEGLARPGHFDGVLRVVLKLFNLTKPTRAYFGKKDAQQLYLIQNMVKSLFLDLEIVPCEIVREDDDLALSSRNVYLNAKERQEALLLCESLKVATHDIIAGERHIEAIKAEMLRTLAPLHVEYVEILNRDFDTIETIEIGNSIILVCAKVGTTRLIDNLWI
SIO_010081: SJPD1_RS02700
subclass of: SO_0000673
so part of: SJPD1_RS02700
location: complement(516717..517538)
location: region:516717-517538:-1
so has part: feature:516717-517538:-1:exon

WP_096045859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516717-517538:-1:exon

SJPD1_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: prfB
locus tag: SJPD1_RS02705
old locus tag: SJPD1_0547
so part of: sequence
location: 517640..518734
location: region:517640-518734:1
so has part: feature:517640-518734:1:exon
subclass of: SO_0000010

position:517640:1
position: 517640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518734:1
position: 518734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517640-518734:1:exon

SJPD1_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: prfB
locus tag: SJPD1_RS02705
old locus tag: SJPD1_0547
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856240.1
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 2
translation: MDSYEYTELLKKLTTKVDNIAQIIKPDELISRLKEIETIEQNPEFWNDAKKAAELQKEKTALNSLLNRYTKANTVVVDAVDLYEMANSENDETTLEELYKDAHHLEDHITNLEIAMMLSGENDNNNAIISIHPGAGGTESQDWASILYRMYLRWAERLGFKVEVLDYQEGEEAGLKDVSFIISGENAYGYLKVENGIHRLVRISPFDANAKRHTSFSSVMVSPEVDDDIDIVIEDRDLKVDTYRSGGAGGQHVNKTDSAIRITHMPTGIVVQCQNDRSQHKNRATAMKMLKSRLYEYELEKQQAVKDGVEKSDNGWGHQIRSYVLAPYQQVKDTRSNIAYSQVSNILDGDISKMIEDVLIAQKR
SIO_010081: SJPD1_RS02705
subclass of: SO_0000673
so part of: SJPD1_RS02705
location: 517640..518734
location: region:517640-518734:1
so has part: feature:517640-518734:1:exon

WP_096045860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517640-518734:1:exon

SJPD1_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02710
old locus tag: SJPD1_0548
so part of: sequence
location: 518782..519105
location: region:518782-519105:1
so has part: feature:518782-519105:1:exon
subclass of: SO_0000010

position:518782:1
position: 518782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519105:1
position: 519105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518782-519105:1:exon

SJPD1_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02710
old locus tag: SJPD1_0548
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKQAILTQLGYGVTPNAQAQLERVINNTIGFEHIEKHLLALHDALKVHHSFVALSSNKDYFKIKNEATGEDLIAEVNELISKWATKFKITLEKVPNKNTYYVIGYK
SIO_010081: SJPD1_RS02710
subclass of: SO_0000673
so part of: SJPD1_RS02710
location: 518782..519105
location: region:518782-519105:1
so has part: feature:518782-519105:1:exon

WP_096045861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518782-519105:1:exon

SJPD1_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02715
old locus tag: SJPD1_0549
so part of: sequence
location: 519118..520512
location: region:519118-520512:1
so has part: feature:519118-520512:1:exon
subclass of: SO_0000010

position:519118:1
position: 519118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520512:1
position: 520512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519118-520512:1:exon

SJPD1_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02715
old locus tag: SJPD1_0549
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768682.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKIKYIVISSVVVAALAATPLVVSHKVDSSIETNRVLLEQNGQKLEILSKSGYMTGTRTFSLEVVDAKKARDFLLSTLVEKNAQYKLFAESLKTETDEGINDAFDGLKFKGEITNSNFLPSDVKVSLSLNQLPRSIQESIANDKVASDAILPLLTRGVLALDMTFGSDQKLKDVKFKDIKEEIKAEGTVLSIDTEKQMLTLTERGGSVQGVLGVGKQNFGINSDMFMFKSELQDFVYNFSYQDDLNNKGDLKIGKYAFEINDEYTNAKFDLGSLKANSSVEDVKKDLQIKADYTFDDIALNNSSADITLKKLFAKLFLRGINSDTMKKVQADYNMLLLGTTPLEDKVLIDDFIALVNHGVKLDLGIALQGFSTEMINLKDVSIDTTLVVAENNYSDKQSPLALLGLLDITSKVKVHKEDRATLESLGLTSAEDFALGKEEGDFFIYEIAMKNGAISVNGQTIQ
SIO_010081: SJPD1_RS02715
subclass of: SO_0000673
so part of: SJPD1_RS02715
location: 519118..520512
location: region:519118-520512:1
so has part: feature:519118-520512:1:exon

WP_096045862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519118-520512:1:exon

SJPD1_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02720
old locus tag: SJPD1_0550
so part of: sequence
location: 520519..521268
location: region:520519-521268:1
so has part: feature:520519-521268:1:exon
subclass of: SO_0000010

position:520519:1
position: 520519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521268:1
position: 521268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520519-521268:1:exon

SJPD1_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02720
old locus tag: SJPD1_0550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012856243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EI24 domain-containing protein
translation: MTQPIPKTNIFALALGDTFSPRVLLISLLSFILTLFVFIGAIWLLFGGVGALSAWIAQSLQSFEGSVEQSWFLSMISLLFITKTIVAILFFFTSAMVVYYLFLMVYSVIVGLFASYFIKEIGILYYPSVAFRGIGLLSYVWIVLKTLLWTTLMFLLLSPLVFIPLFNFVLLVPVFYLFHKLLVLDVASMINSKEEYLALKKLYAGQMRGISLICFALTVIPFLGVVIYPYYVIVMSHFLFRKTEELRAL
SIO_010081: SJPD1_RS02720
subclass of: SO_0000673
so part of: SJPD1_RS02720
location: 520519..521268
location: region:520519-521268:1
so has part: feature:520519-521268:1:exon

WP_096045863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520519-521268:1:exon

SJPD1_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02725
old locus tag: SJPD1_0551
so part of: sequence
location: complement(521265..521759)
location: region:521265-521759:-1
so has part: feature:521265-521759:-1:exon
subclass of: SO_0000010

position:521265:-1
position: 521265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521759:-1
position: 521759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521265-521759:-1:exon

SJPD1_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02725
old locus tag: SJPD1_0551
EC number: 3.5.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparaginase domain-containing protein
translation: MEKILIINTGGTFNKRYNPLKGELEVPQDGIAVESILRYCYNTSYELLNIIHKDSLEMSEEDRELMVKTIQSSQCHKILIVHGTDTMDVTATFLALHVKDKIITLTGAMVPFSIDTVEATSNFMMALGDLMCREKNGVNLAMHGAIASHGSIYKNRQKGIFELC
SIO_010081: SJPD1_RS02725
subclass of: SO_0000673
so part of: SJPD1_RS02725
location: complement(521265..521759)
location: region:521265-521759:-1
so has part: feature:521265-521759:-1:exon

WP_096045864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521265-521759:-1:exon

SJPD1_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02730
old locus tag: SJPD1_0552
so part of: sequence
location: complement(521762..523438)
location: region:521762-523438:-1
so has part: feature:521762-523438:-1:exon
subclass of: SO_0000010

position:521762:-1
position: 521762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523438:-1
position: 523438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521762-523438:-1:exon

SJPD1_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02730
old locus tag: SJPD1_0552
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768685.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MSHQVLALKYRPSSFDKLIGQESITQTLSLALNQDRLSHAYLFSGLRGSGKTSTARIFAKALVCEQGPTSTPCEVCEHCLSANENRHIDIIEMDAASNRGIDDIRELIESTKYKPTSARFKIFIIDEVHMLTTQAFNALLKTLEEPPSYVKFILATTDPLKLPATILSRAQHFRFKQIKQSDVVNHLCHILHLENIEYEKEALEMLSRAGNGSLRDTLTLMDQAIIYSKGYITPENVATMLGLLDPNQLETIFTTILSGNKNEMLGIIKELESYECEIVIDELIAYLKNAFFAQDRRFSTLLYERFFKILSESKSLLYINANNGFVLSLIFFKMIEATNIKTIEEMIDSLENEKFRLPTTAHAKTDVSEAPTTPVEVEETSLHVKDQGVTSEMLFARLCDKLLDRNAELGDCFKKHIRFDSFSEEQLMLSSSAEGEASKTLNTHYSIIKHFVQELFGLETKIKITKMHVLPPEPKPEPSFDPNYELQMSEAELSANDQSASMIESVAFEDAPQSDSCAAGAIMAGQREIDAKEVLNTPFVQRATELFDPQKIQIHQKV
SIO_010081: SJPD1_RS02730
subclass of: SO_0000673
so part of: SJPD1_RS02730
location: complement(521762..523438)
location: region:521762-523438:-1
so has part: feature:521762-523438:-1:exon

WP_096045865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521762-523438:-1:exon

SJPD1_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: rho
locus tag: SJPD1_RS02735
old locus tag: SJPD1_0553
so part of: sequence
location: complement(523602..525017)
location: region:523602-525017:-1
so has part: feature:523602-525017:-1:exon
subclass of: SO_0000010

position:523602:-1
position: 523602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525017:-1
position: 525017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523602-525017:-1:exon

SJPD1_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: rho
locus tag: SJPD1_RS02735
old locus tag: SJPD1_0553
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768686.1
GO function: GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MNDQTNNKEGTMSGNTPTSNNQPCANTAQPNGNTNGNVQAKPTHYNKSRTHIPVDGYKIEGLRTTPLEKLLEIAAELGIENPNELKRQDLMFEILKSQVNQGGFILFTGILEIAGEGYGFLRATDANFSDSANDAYVSSTQVKKFALRTGDIVTGQVRPPKDQERYYALLKIEAINYLPLVESKKRPLFENLTPLYPTEKIKLEYDPMKITGRVLDLFTPIGKGQRGLIVAPPRSGKTELMKELAHGIARNHPESELIVLLVDERPEEVTDMQRCVQGEVYSSTFDMPASNHVRVANLVIEKAKRRVEMGKDVIILLDSITRLARAYNTVTPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIISTALIETGSRMDEVIFEEFKGTGNSEIVLDRNISDRRIYPAINIMKSGTRKEELLLTPDRLQKIWALRSAISQMDDIEALKFLYAKMLKTKDNEELLSIMND
SIO_010081: SJPD1_RS02735
subclass of: SO_0000673
so part of: SJPD1_RS02735
location: complement(523602..525017)
location: region:523602-525017:-1
so has part: feature:523602-525017:-1:exon

WP_226372232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523602-525017:-1:exon

SJPD1_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: uppS
locus tag: SJPD1_RS02740
old locus tag: SJPD1_0554
so part of: sequence
location: 525218..525895
location: region:525218-525895:1
so has part: feature:525218-525895:1:exon
subclass of: SO_0000010

position:525218:1
position: 525218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525895:1
position: 525895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525218-525895:1:exon

SJPD1_RS02740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: uppS
locus tag: SJPD1_RS02740
old locus tag: SJPD1_0554
EC number: 2.5.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013136707.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyprenyl diphosphate synthase
translation: MNDLVHLAIIMDGNGRWAQRQGKERSFGHKEGAKKVREITKYAAKMGIKYLTLYAFSTENWNRPKAEVSVLMKLLSKYLHSEIPILLENNICFDVIGDMSKLSSSLQKEIAYAKEATQHCTGLRQILAINYGAQDEILRAINKSLHVKGEITKEILEAHLDTAGIPSVDLLLRTGGDCRLSNFLLWQSAYAELFFTKTLWPEFSMGELEAIISEYKTSERRYGKV
SIO_010081: SJPD1_RS02740
subclass of: SO_0000673
so part of: SJPD1_RS02740
location: 525218..525895
location: region:525218-525895:1
so has part: feature:525218-525895:1:exon

WP_096045866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525218-525895:1:exon

SJPD1_RS02745
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02745
old locus tag: SJPD1_0555
so part of: sequence
location: 526022..529072
location: region:526022-529072:1
so has part: feature:526022-529072:1:exon
subclass of: SO_0000010

position:526022:1
position: 526022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529072:1
position: 529072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526022-529072:1:exon

SJPD1_RS02745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02745
old locus tag: SJPD1_0555
inference: COORDINATES: protein motif:HMM:NF024376.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MKKIILIVLFCLCQYVSAEEALRLGILAFRPKEQALLQWQPFATYLQNAIGKPISLHIYNYPEFTQAVANHEVDIILTNPGHYIVLKNKFKLSAPLVTQITQKDHFTLTQFAGVMFTRHDSPILTLHDMEYKQIAVTDTNSLGGYQMQAYELANSGIAPHDTRLVITGMPHDKVIEAVLSHKADVGFVRTNVLEDMIQEGKLALSDIKIINEQTDPKFPFIHSTKLYPEWPLVVVPNFDEHIARDLTVALLALPSQSEAATRAHIYGFTVPADYKGVEDALRMLRVPPFEEAPNFTLADFWSRYSNYITGILTVFLVFLMSSAQLYRQNKQIRQNEKYLLSAQDSLQSTIDAIPDTLFEMSLEGVYFRVGRAHAHFSSMLENFIGKNVNEIYPSHVALVFMEALQEANKKGRAFGFQYALEGTHKLFWFELSVSKKKESHDMAHFIVLSHDITDRKETEAKLKLAASVFTYAREGIMITNASGEIVEVNDTFTCITGYTHEEVIGHNPRLLKSGRQGDSFYKQMWQSLLEKGHWYGEISNRRKSGEVYIQMTSISAVYDEKRVIQSYVALFTDITTMKEHEKQLEYIAHYDALTSLPNRVLFADRLREAMVQTERRKKELAVVYLDLDGFKAINDQYGHHIGDELLVIIAERMEEALRQGDTISRLGGDEFVAVLTDLESLEECRPILDRLLQATSDPIVINDNIIQVSSSIGVTLYPKDGVDAEQLLRHADLAMYQSKQSGKNRYHFFDIEYDKAIQQQNASLGNILSAIANDEFILYYQPKVNLKTHELISVEALIRWQHPEQGFLLPHAFLPIVEDHVLSIKLGEWVIERAFKQMSDWIKKGLPLAVSINVGARQLQDANFTDYIQTMLLRYPEVPSHLIILEILETSALEDMVHVSQIMHACKALGVRFALDDFGTGYSSLSYLRKLPIDILKIDQSFICNLLHDRDDLAIVEAIVGLSKAFDLRVVAEGVETQEHAELLLKHGCELAQGYGIARPMHPDAIIDWKKSSSYM
SIO_010081: SJPD1_RS02745
subclass of: SO_0000673
so part of: SJPD1_RS02745
location: 526022..529072
location: region:526022-529072:1
so has part: feature:526022-529072:1:exon

WP_096045867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526022-529072:1:exon

SJPD1_RS02750
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
gene: hcp
locus tag: SJPD1_RS02750
old locus tag: SJPD1_0556
so part of: sequence
location: 529152..530483
location: region:529152-530483:1
so has part: feature:529152-530483:1:exon
subclass of: SO_0000010

position:529152:1
position: 529152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530483:1
position: 530483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529152-530483:1:exon

SJPD1_RS02750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
gene: hcp
locus tag: SJPD1_RS02750
old locus tag: SJPD1_0556
EC number: 1.7.99.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768692.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxylamine reductase
translation: MSLNMLCDQCSMSAIGGCGSKGQDAGTCGKDANLAKLQDIMIYGLKGLSAYRTHANEFGADTKEVDDVIAQTLYFTLTNVNFNFDDHIAQLMKIGSAGVRMMDILTEAHTSHLGVPTPVSISQNKAEGKGILVSGHNLDMLLELLRQTEGKGINIYTHSEMLPAHGYPELRKYAHLKGNIGKSWFDQTKLFEEWGGTIIVNTNCIVPPKSNSTYVDRLYTYDIVGIKEGKKIHNNDFSEVIAQTLALPDVTGFDSEETLVTGHHYKTILGLAPQILEAVQAGKISQFFVIAGCDAPGSGGEYYRKMAESLPNDCVILTSSCGKFRFNDIDFGTVADTGIPRYLDLGQCNDSNGAVHIALALAGALGVTVHDLPVSIVLSWMEQKAVLILLGLFSLGIKNIYLGPKPPQFVNDDIFSFLQENFNLHLTDDATSDMEKLLIKKPA
SIO_010081: SJPD1_RS02750
subclass of: SO_0000673
so part of: SJPD1_RS02750
location: 529152..530483
location: region:529152-530483:1
so has part: feature:529152-530483:1:exon

WP_096045868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529152-530483:1:exon

SJPD1_RS02755
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02755
old locus tag: SJPD1_0557
so part of: sequence
location: 530635..531144
location: region:530635-531144:1
so has part: feature:530635-531144:1:exon
subclass of: SO_0000010

position:530635:1
position: 530635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531144:1
position: 531144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530635-531144:1:exon

SJPD1_RS02755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02755
old locus tag: SJPD1_0557
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014473453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipocalin family protein
translation: MFKIFITFICSFIFLGCAKHYAPLPTVEKVDLTRYLGTWYEIARYDHSFEKGCTNVSATYALNENGSINVLNQCTKEDGTHKEAQGIAYAEDKTHSKLKVSFFRPFYGNYWVLMLDEDYTYALIGEPSREYLWILSRSKSIDEATKQKILTKAQEYHYDTSKLLWVQQK
SIO_010081: SJPD1_RS02755
subclass of: SO_0000673
so part of: SJPD1_RS02755
location: 530635..531144
location: region:530635-531144:1
so has part: feature:530635-531144:1:exon

WP_096045869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530635-531144:1:exon

SJPD1_RS02760
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02760
old locus tag: SJPD1_0558
so part of: sequence
location: complement(531223..533259)
location: region:531223-533259:-1
so has part: feature:531223-533259:-1:exon
subclass of: SO_0000010

position:531223:-1
position: 531223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533259:-1
position: 533259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531223-533259:-1:exon

SJPD1_RS02760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02760
old locus tag: SJPD1_0558
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKNYTQLFINLVNDVLDTEKSYFNELENIKKLDFPSIEKKILNDYEIDYPINGNKAQDLFVEQIKQFILSSQDNCTMDMSTLYHVSKQIHIDHLVNDKKLEKGHIYYSLAKTIRDYGIYNEEKIIDFSNKLFWKELIKKLYLLNLLSQNGFFANLREDYNTEIPHLVDAIIFFKKYVNINLNCIDGEINFQKGQDKKIASIIEKKLQQVDIFHFIHFILSQSRHDKTIPFNYIINIAIKNIHHSNFKKKNLETLKSMTNYFKQFINLFQLRSFNQWEYIFIDETNIQEKLKKQILHSSLYLLSYPLKTSTVINYINNLIGNSALNTTFEKQFGFSKNNLIDFLHQVELFGNNQHIIKLDITVFKHFEQIIKFFCIDSKNINSRYSVPINTTEEQNLFVHNPIIHYKNEYYIIGFKYFKMYFYNALVEKIKSQIDEDITTKIGKNIDNYVEAIFENNNFDIYSGKYALSKREVYECDLVIKIDDKIVFIENKNKALTKNAFAGSNLHILQDFIRAFATSQQQLLRHEKHLTEKKQLNFLNGKVLNYNNERIIKISLSPNNWYSIMNNRLQSLLLALIRIRFTFKEEAPVDVIKSFTDTNKDLDKLTKIIEELNQSNNLDNILFSSLFIPLELLSENEHDKNLIHHILGLLFMKYDTNNIYDSYNEYKKLKKHAKETKT
SIO_010081: SJPD1_RS02760
subclass of: SO_0000673
so part of: SJPD1_RS02760
location: complement(531223..533259)
location: region:531223-533259:-1
so has part: feature:531223-533259:-1:exon

WP_096045870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531223-533259:-1:exon

SJPD1_RS02765
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02765
old locus tag: SJPD1_0559
so part of: sequence
location: complement(533256..534008)
location: region:533256-534008:-1
so has part: feature:533256-534008:-1:exon
subclass of: SO_0000010

position:533256:-1
position: 533256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534008:-1
position: 534008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533256-534008:-1:exon

SJPD1_RS02765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02765
old locus tag: SJPD1_0559
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768697.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NERD domain-containing protein
translation: MIFWLIGSVFVLGILFKTPWMKGKVGEFTVNVATSLHLNKNEYINIRNITLQLNDGSTTQIDHIIVSRYGVFVIETKNMKGWIFGDEHQSMWTQQIFKEKHRFQNPLRQNYRHTKALEEILALPTENIMSIVVFIGDCKFKTTMPKNVFINAKYTSYIQSFQEEKLSAYQFDMTIETLSQKRLKQSFTTDREHVANLSARHNTKPTPTQTTKICSRCGKEMVLRHNRQTGEEFYGCSGYPKCRNIVKGTS
SIO_010081: SJPD1_RS02765
subclass of: SO_0000673
so part of: SJPD1_RS02765
location: complement(533256..534008)
location: region:533256-534008:-1
so has part: feature:533256-534008:-1:exon

WP_096045871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533256-534008:-1:exon

SJPD1_RS02770
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02770
old locus tag: SJPD1_0560
so part of: sequence
location: complement(534082..534930)
location: region:534082-534930:-1
so has part: feature:534082-534930:-1:exon
subclass of: SO_0000010

position:534082:-1
position: 534082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534930:-1
position: 534930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534082-534930:-1:exon

SJPD1_RS02770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02770
old locus tag: SJPD1_0560
inference: COORDINATES: protein motif:HMM:TIGR03709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyphosphate kinase 2 family protein
translation: MPEGAKVELKKFPTLVKAFYASKEAYEETLKENIEALSDLQQLLYASNKYAVLLIFQAMDAAGKDGVIRHVLSGINPQGCQVFSFKHPAATELAHDFLWRTTCVLPERGKIGVFNRSYYEEVLIVRVHPEILKGQRLPDSVLDEESIWRERYRSIMDLENHLHRNGTKIVKFFLHLSKDEQKKRFLERIDKPNKNWKFSLADLEERQYWKAYMHAYESCLSATSTKHAPWYIVPADDKKNARLIISNILLDTFKALDMHYPEADDKRQEELQAIRQRLVEEE
SIO_010081: SJPD1_RS02770
subclass of: SO_0000673
so part of: SJPD1_RS02770
location: complement(534082..534930)
location: region:534082-534930:-1
so has part: feature:534082-534930:-1:exon

WP_210394399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534082-534930:-1:exon

SJPD1_RS02775
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02775
old locus tag: SJPD1_0561
so part of: sequence
location: complement(535077..536363)
location: region:535077-536363:-1
so has part: feature:535077-536363:-1:exon
subclass of: SO_0000010

position:535077:-1
position: 535077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536363:-1
position: 536363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535077-536363:-1:exon

SJPD1_RS02775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02775
old locus tag: SJPD1_0561
inference: COORDINATES: protein motif:HMM:NF040019.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytidylate kinase family protein
translation: MLNLNMTKRIVVFILGQFIMALGVSLSVKANLGVSPISCVPYVYSLTMPLSLGELTILLNLVFIASQMAVLRKNYQWTQLVQLPSVIVFGYCIDLTMHLISSLSPTSYVAQAFWCLAACSVLAFGIFLLLKTKLTYLPLDGLAVAISHTYHKEFGKVKISLDSSMVIIGVISSFTFLNRLEGIREGSVVAALLVGALIKLYSTKLVFVEQWLGTYVAPQTQSTQEAALNSLVITISREYGSGGHEIGEMIAQKLGIPFYDKELIKLTAEETGYTAEYIQANEQHLASELLYELYEQNYAYVDDQLPPADVLFMVQSKIIRDICAKDACVIVGRCANFILKDDPNCFNVFIHANMAYRKTKVNEKYKATPPCSDKDLEMSDKNRANYCLHYTKHDWKDATNYHVTLDASLYGSEKAAQKIIELLKDFAH
SIO_010081: SJPD1_RS02775
subclass of: SO_0000673
so part of: SJPD1_RS02775
location: complement(535077..536363)
location: region:535077-536363:-1
so has part: feature:535077-536363:-1:exon

WP_210394402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535077-536363:-1:exon

SJPD1_RS02780
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02780
old locus tag: SJPD1_0562
so part of: sequence
location: complement(536500..536715)
location: region:536500-536715:-1
so has part: feature:536500-536715:-1:exon
subclass of: SO_0000010

position:536500:-1
position: 536500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536715:-1
position: 536715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536500-536715:-1:exon

SJPD1_RS02780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02780
old locus tag: SJPD1_0562
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013327337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-binding S4 domain-containing protein
translation: MTFELEEDFIELFKLLKVTGVAESGAQAKMLIEEGQVKRNGEVETRKRAKIVAGEKIEACGEIIEVEAISM
SIO_010081: SJPD1_RS02780
subclass of: SO_0000673
so part of: SJPD1_RS02780
location: complement(536500..536715)
location: region:536500-536715:-1
so has part: feature:536500-536715:-1:exon

WP_096045873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536500-536715:-1:exon

SJPD1_RS02785
type: Gene
subclass of: SO_0000704
RO_0002162: 1854492
locus tag: SJPD1_RS02785
old locus tag: SJPD1_0563
so part of: sequence
location: 536844..537344
location: region:536844-537344:1
so has part: feature:536844-537344:1:exon
subclass of: SO_0000010

position:536844:1
position: 536844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537344:1
position: 537344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536844-537344:1:exon

SJPD1_RS02785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1854492
locus tag: SJPD1_RS02785
old locus tag: SJPD1_0563
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014768322.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rieske 2Fe-2S domain-containing protein
translation: MDRNRRVVNYSLLALTGTGMYFSIGTMFQTLEPPKKARLDAATFIDTTTLPLNEISYFMWQKKPLFILKKDASMTLDKKRDIHIGEYYYTLMIGICTHLGCVPKYDASVKRFICPCHNGQFDSNGNALASPVSKPLVIPPFKLNGEVIIVGEVGEAYLQLMEEAKA
SIO_010081: SJPD1_RS02785
subclass of: SO_0000673
so part of: SJPD1_RS02785
location: 536844..537344
location: region:536844-537344:1
so has part: feature:536844-537344:1:exon