Rhodoferax koreense strain DCY-110 plasmid unnamed2.
type: Entry
definition: Rhodoferax koreense strain DCY-110 plasmid unnamed2.
sequence version: NZ_CP019238.1
sequence date: 2023-03-12
sequence: sequence
division: CON
label: NZ_CP019238.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN06118135
keyword: RefSeq
source: Rhodoferax koreense
organism: Rhodoferax koreense
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP019238.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 21-DEC-2016\nAssembly Method :: PacBio SMRT Analysis v. v2.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 146.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 01:38:27\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,519\nCDSs (total) :: 5,460\nGenes (coding) :: 5,385\nCDSs (with protein) :: 5,385\nGenes (RNA) :: 59\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 75\nCDSs (without protein) :: 75\nPseudo Genes (ambiguous residues) :: 0 of 75\nPseudo Genes (frameshifted) :: 40 of 75\nPseudo Genes (incomplete) :: 54 of 75\nPseudo Genes (internal stop) :: 6 of 75\nPseudo Genes (multiple problems) :: 21 of 75\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 71276
topology: linear
so has quality: SO_0000987
location: 1..71276
location: region:1-71276:1
RO_0002162: 1842727

NZ_CP019238
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN06118135
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Kim, Y.J.
author: Farh, M.E.-A.
author: Yang, D.-C.
journal: Submitted (13-JAN-2017) College of Health Science, Korea University, Anamro, Seoul 02841, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71276:1
position: 71276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-71276:1:source
so part of: sequence
organism: Rhodoferax koreense
mol type: genomic DNA
strain: DCY-110
isolation source: environment
type material: type strain of Rhodoferax koreense
plasmid: unnamed2
collection date: 1991-01-01

1842727
type: Taxonomy
SIO_000068: taxonomy

RD110_RS26925
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26925
old locus tag: RD110_26925
so part of: sequence
location: complement(<1..329)
location: region:1-329:-1
so has part: feature:1-329:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:329:-1
position: 329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-329:-1:exon

RD110_RS26925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26925
old locus tag: RD110_26925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003379522.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MRVLLVEDDPMIGDAIQGALKDASYAADWVKDGQTALTTLGCQHYDLVLLDLGLPGKDGLEVLASIRAKDNPVPLLIITARDGLDDRLRGLDGGADDYVSKPFQMAELLA
SIO_010081: RD110_RS26925
subclass of: SO_0000673
so part of: RD110_RS26925
location: complement(<1..329)
location: region:1-329:-1
so has part: feature:1-329:-1:exon

WP_157900425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-329:-1:exon

RD110_RS26930
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26930
old locus tag: RD110_26930
pseudo: true
so part of: sequence
location: complement(352..1105)
location: region:352-1105:-1
so has part: feature:352-1105:-1:exon
subclass of: SO_0000010

position:352:-1
position: 352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105:-1
position: 1105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352-1105:-1:exon

RD110_RS26930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26930
old locus tag: RD110_26930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008921974.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: RD110_RS26930
subclass of: SO_0000673
so part of: RD110_RS26930
location: complement(352..1105)
location: region:352-1105:-1
so has part: feature:352-1105:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352-1105:-1:exon

RD110_RS26935
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26935
old locus tag: RD110_26935
so part of: sequence
location: complement(1114..1563)
location: region:1114-1563:-1
so has part: feature:1114-1563:-1:exon
subclass of: SO_0000010

position:1114:-1
position: 1114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1563:-1
position: 1563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114-1563:-1:exon

RD110_RS26935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26935
old locus tag: RD110_26935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005797953.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFIQHSIARSVAAISAAVLLALAAGCSKSADQNNASSASTTPAQTVSALQVKTASKLGDLSAFRSIATDVAAIVDKGDLPAAKSRIKDLEVAWDSAEAGLKPRAADDWHLLDKAIDKSLATLRADTPSQADCKAAMDALLKTFNTLEGK
SIO_010081: RD110_RS26935
subclass of: SO_0000673
so part of: RD110_RS26935
location: complement(1114..1563)
location: region:1114-1563:-1
so has part: feature:1114-1563:-1:exon

WP_076205818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1114-1563:-1:exon

RD110_RS26940
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26940
old locus tag: RD110_26940
pseudo: true
so part of: sequence
location: complement(1593..2375)
location: region:1593-2375:-1
so has part: feature:1593-2375:-1:exon
subclass of: SO_0000010

position:1593:-1
position: 1593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2375:-1
position: 2375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1593-2375:-1:exon

RD110_RS26940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26940
old locus tag: RD110_26940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020200937.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: RD110_RS26940
subclass of: SO_0000673
so part of: RD110_RS26940
location: complement(1593..2375)
location: region:1593-2375:-1
so has part: feature:1593-2375:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1593-2375:-1:exon

RD110_RS26945
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26945
old locus tag: RD110_26945
pseudo: true
so part of: sequence
location: complement(2446..3041)
location: region:2446-3041:-1
so has part: feature:2446-3041:-1:exon
subclass of: SO_0000010

position:2446:-1
position: 2446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3041:-1
position: 3041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2446-3041:-1:exon

RD110_RS26945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26945
old locus tag: RD110_26945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011517526.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: undecaprenyl-diphosphatase
SIO_010081: RD110_RS26945
subclass of: SO_0000673
so part of: RD110_RS26945
location: complement(2446..3041)
location: region:2446-3041:-1
so has part: feature:2446-3041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2446-3041:-1:exon

RD110_RS26950
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26950
old locus tag: RD110_26950
so part of: sequence
location: complement(3098..3433)
location: region:3098-3433:-1
so has part: feature:3098-3433:-1:exon
subclass of: SO_0000010

position:3098:-1
position: 3098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3433:-1
position: 3433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3098-3433:-1:exon

RD110_RS26950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26950
old locus tag: RD110_26950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011517525.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PepSY domain-containing protein
translation: MYRYTKLSLLAVAIAATGAVAYAANGGMENDALAISKAKIPLTQAVTVAEQHANGKASRAEYENSKQGWVYDVEVVSGAKVFDVRVDADKGTVISSAEDKADHDDDHDKRD
SIO_010081: RD110_RS26950
subclass of: SO_0000673
so part of: RD110_RS26950
location: complement(3098..3433)
location: region:3098-3433:-1
so has part: feature:3098-3433:-1:exon

WP_005797945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3098-3433:-1:exon

RD110_RS26960
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26960
old locus tag: RD110_26960
so part of: sequence
location: complement(3978..5170)
location: region:3978-5170:-1
so has part: feature:3978-5170:-1:exon
subclass of: SO_0000010

position:3978:-1
position: 3978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5170:-1
position: 5170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3978-5170:-1:exon

RD110_RS26960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26960
old locus tag: RD110_26960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612070.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MSDKQVRAQYTREYKLEAVRQVKGGQSIAATAKVLGIPKASLSNWVRRGAKGDVGGVGDRPASVTPEQMELARLRAEVARLRMERDIGKKSRGVLRAGHAARYAWIYQMRNQYPVSISCEVLEVSASGYFVWQRRRDAARPGPAGRHSDEALLAHMRAIHIEVKQEYGWPRMHKELLARGIRVGKERVRHLMQQHGIKAKTKRKFVVTTDSRHSLPVAPDLVQRRFNPEAPNRLWSGDITYIATDEGWLYLAGVIDLFSRQVVGWSMQAHMQASLVKDALTMAWFRRRPEAGLIFHSDRGSQYCSHEFQDTLRVWEMRSSMSRKGNCWDNAPTESFWGRLKTASLYGRKFATRREAMDAVLDWMAFYNHRRLHSTLGYLSPMQYEQRWYEAQRKKAA
SIO_010081: RD110_RS26960
subclass of: SO_0000673
so part of: RD110_RS26960
location: complement(join(3978..4909,4909..5170))
location: region:3978-5170:-1
so has part: feature:4909-5170:-1:exon
so has part: feature:3978-4909:-1:exon

WP_087748592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4909-5170:-1:exon

position:4909:-1
position: 4909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3978-4909:-1:exon

RD110_RS26975
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26975
old locus tag: RD110_26975
so part of: sequence
location: complement(5433..5996)
location: region:5433-5996:-1
so has part: feature:5433-5996:-1:exon
subclass of: SO_0000010

position:5433:-1
position: 5433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5996:-1
position: 5996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5433-5996:-1:exon

RD110_RS26975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26975
old locus tag: RD110_26975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MALIGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLAAALAYLRDGDVLAVWRLDRLGRSMPHLIETIGALEARGVGFRSLTESIDTTTPGGRLIFHVFGALGQFERDLIRERTKAGLTAAAARGRKGGRKPVVTADKLQRAQEHIANGLNVREAATRLKVSKTALYAALQGGSEQP
SIO_010081: RD110_RS26975
subclass of: SO_0000673
so part of: RD110_RS26975
location: complement(5433..5996)
location: region:5433-5996:-1
so has part: feature:5433-5996:-1:exon

WP_021561445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5433-5996:-1:exon

RD110_RS26980
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26980
old locus tag: RD110_26980
so part of: sequence
location: complement(6232..6552)
location: region:6232-6552:-1
so has part: feature:6232-6552:-1:exon
subclass of: SO_0000010

position:6232:-1
position: 6232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6552:-1
position: 6552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6232-6552:-1:exon

RD110_RS26980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26980
old locus tag: RD110_26980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007974210.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MQRGDLVTVSLQGDYGKPRPALIVQSDLLTDLESVVLCPVTSDLRNAAFRVTVEPNPANGLRALSQVMVDKLSTLPRTKISEPFGRLDDERMKAIDRALLLVVGVI
SIO_010081: RD110_RS26980
subclass of: SO_0000673
so part of: RD110_RS26980
location: complement(6232..6552)
location: region:6232-6552:-1
so has part: feature:6232-6552:-1:exon

WP_021561444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6232-6552:-1:exon

RD110_RS26985
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26985
old locus tag: RD110_26985
so part of: sequence
location: complement(6552..6767)
location: region:6552-6767:-1
so has part: feature:6552-6767:-1:exon
subclass of: SO_0000010

position:6767:-1
position: 6767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6552-6767:-1:exon

RD110_RS26985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26985
old locus tag: RD110_26985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345582.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin MazE family protein
translation: MPSIHESKVARHRERMRAAGLRPVQFWVPDTRSPEFTAQVRKQCQSLKGDPAEAEVLRFTEEAASHVEGWE
SIO_010081: RD110_RS26985
subclass of: SO_0000673
so part of: RD110_RS26985
location: complement(6552..6767)
location: region:6552-6767:-1
so has part: feature:6552-6767:-1:exon

WP_021561443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6552-6767:-1:exon

RD110_RS26990
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26990
old locus tag: RD110_26990
so part of: sequence
location: 7056..7811
location: region:7056-7811:1
so has part: feature:7056-7811:1:exon
subclass of: SO_0000010

position:7056:1
position: 7056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7811:1
position: 7811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7056-7811:1:exon

RD110_RS26990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26990
old locus tag: RD110_26990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173692.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MPRQSRAARQALAKTPPLRVGGDGLVEGADRIMRTPTEHQAAGVAFKVARIYLRVSTDEQDLTRQAAIVESTRAAGFYVAGIYREKASGARADRAELLRMIGDLQPGEVVVAEKIDRISRLPLPEAERLVASIRAQGARLAVPGVVDLSDLAAEAKGVAKVVLESIQDMLLKLALQMARDDYEDRRERQRQGVELAKDAGRYTGRKANTKVHERIVALRSAGHSIPETARLAGCSESQVKRVWALHNQAQA
SIO_010081: RD110_RS26990
subclass of: SO_0000673
so part of: RD110_RS26990
location: 7056..7811
location: region:7056-7811:1
so has part: feature:7056-7811:1:exon

WP_232476757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7056-7811:1:exon

RD110_RS26995
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS26995
old locus tag: RD110_26995
so part of: sequence
location: complement(7813..8487)
location: region:7813-8487:-1
so has part: feature:7813-8487:-1:exon
subclass of: SO_0000010

position:7813:-1
position: 7813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8487:-1
position: 8487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7813-8487:-1:exon

RD110_RS26995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS26995
old locus tag: RD110_26995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011178411.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methylase
translation: MRYPGGKGGAGVYQTIINNIPPHDTYIETHLGGGNILERKRPAARSVGIDVDPEVIEVWQQLDVPGLELHHGDAVAWLESHQFTGSEFVYADPPYVMDSRRGGKLYRHEYDDADHVRLLDVLAGLPCAVMVSGYSSTIYDSSPLASWRTIDFNAMTRGGIAIERLWMNYPEPAELHDLRYLGSNFRERERIKRKKARWQAKLAKLDPLERAAIMECLRELEAAE
SIO_010081: RD110_RS26995
subclass of: SO_0000673
so part of: RD110_RS26995
location: complement(7813..8487)
location: region:7813-8487:-1
so has part: feature:7813-8487:-1:exon

WP_011178411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7813-8487:-1:exon

RD110_RS27000
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27000
old locus tag: RD110_27000
so part of: sequence
location: complement(8642..9073)
location: region:8642-9073:-1
so has part: feature:8642-9073:-1:exon
subclass of: SO_0000010

position:8642:-1
position: 8642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9073:-1
position: 9073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8642-9073:-1:exon

RD110_RS27000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27000
old locus tag: RD110_27000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001665065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MRKPVLLALSLAFLVSAQSALAAGDAGNFGTPIKSGVSVSFPDSSATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADEALALRRALSARSYLVARGVSPLKIMVNFASAADFVADNSTAEGRRENQRVDIEVVYIPTY
SIO_010081: RD110_RS27000
subclass of: SO_0000673
so part of: RD110_RS27000
location: complement(8642..9073)
location: region:8642-9073:-1
so has part: feature:8642-9073:-1:exon

WP_001665065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8642-9073:-1:exon

RD110_RS27005
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27005
old locus tag: RD110_27005
so part of: sequence
location: complement(9089..9787)
location: region:9089-9787:-1
so has part: feature:9089-9787:-1:exon
subclass of: SO_0000010

position:9089:-1
position: 9089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9787:-1
position: 9787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9089-9787:-1:exon

RD110_RS27005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27005
old locus tag: RD110_27005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraX family protein
translation: MKALRIPDGTVEALKWLALVLMTGDHVNKYLFNATLPVLFEAGRVALPLFVFVLAYNLARPGTLERGVYGRTMSRLAMFGALASVPFVALGGLYAGWWPLNVMFTLLVVTATAYLVERGGKLHLAAAGVVFLVGGSSVEYWWPAVAFGLAVWSYTRRPSWAAAAVAVLACAALWFVNRNLWALAALPVLFLASRVDVRVPRLRWAFYAYYPLHLASLWLIRIPMSKAGYLFF
SIO_010081: RD110_RS27005
subclass of: SO_0000673
so part of: RD110_RS27005
location: complement(9089..9787)
location: region:9089-9787:-1
so has part: feature:9089-9787:-1:exon

WP_011114053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9089-9787:-1:exon

RD110_RS27010
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27010
old locus tag: RD110_27010
so part of: sequence
location: complement(9787..10053)
location: region:9787-10053:-1
so has part: feature:9787-10053:-1:exon
subclass of: SO_0000010

position:10053:-1
position: 10053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9787-10053:-1:exon

RD110_RS27010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27010
old locus tag: RD110_27010
function: unknown
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798697.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKFHAFMMRYTLGVGRLLQAYCKWAEGQAKNQLDLLLLGLGPIFALGLLLWALPAWIGKPIAFVLSLPALYIIFLVLRAYAIRGGRR
SIO_010081: RD110_RS27010
subclass of: SO_0000673
so part of: RD110_RS27010
location: complement(9787..10053)
location: region:9787-10053:-1
so has part: feature:9787-10053:-1:exon

WP_010890140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9787-10053:-1:exon

RD110_RS27015
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27015
old locus tag: RD110_27015
so part of: sequence
location: complement(10082..10717)
location: region:10082-10717:-1
so has part: feature:10082-10717:-1:exon
subclass of: SO_0000010

position:10082:-1
position: 10082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10717:-1
position: 10717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10082-10717:-1:exon

RD110_RS27015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27015
old locus tag: RD110_27015
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798698.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase SLT domain-containing protein
translation: MPFFADLPPQLQERVVCSISAAVKYEVPVNIVLAVAEKEGGKPGQWVRNSNGTHDVGPMQFNTAYLGDLARYGITANDVAAAGCYSFDLAAWRLRMHIRNDKGDLWTKAANYHSRTPQYNAVYRADLMRKASKWADWLEARFVTLDVTKAGATPSTPSQPATVAQRATPAARPAPAPQQAAPAAAAARSVSVAGYVPRTVSFNTSREGSAE
SIO_010081: RD110_RS27015
subclass of: SO_0000673
so part of: RD110_RS27015
location: complement(10082..10717)
location: region:10082-10717:-1
so has part: feature:10082-10717:-1:exon

WP_011114052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10082-10717:-1:exon

RD110_RS27020
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27020
old locus tag: RD110_27020
so part of: sequence
location: complement(10731..11318)
location: region:10731-11318:-1
so has part: feature:10731-11318:-1:exon
subclass of: SO_0000010

position:10731:-1
position: 10731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11318:-1
position: 11318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10731-11318:-1:exon

RD110_RS27020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27020
old locus tag: RD110_27020
function: probable role in the formation of the mating lock (cell-cell contact between donor and recipient) during conjugation on the basis that TrbM shows homology to Haemophilus influenzae adhesin and has an export signal sequence
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MKKKLFALAALVAALGSTAGTASAQDVLTGDTRLACEAILCLSSGTRPSECTPSLSRYFNITKRKLSDTIRARLNFLQLCPVASQTPEMQSLVSAISRGAGRCDAQSLNSTLVMWTGGYDDGRTYISNQLPDYCGAYTGHAYTDFASSGTLPRYVGTPERGGYWVEARDYDRALAEYNERIRREDEERRRQSWLN
SIO_010081: RD110_RS27020
subclass of: SO_0000673
so part of: RD110_RS27020
location: complement(10731..11318)
location: region:10731-11318:-1
so has part: feature:10731-11318:-1:exon

WP_010890138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10731-11318:-1:exon

RD110_RS27025
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: trbL
locus tag: RD110_RS27025
old locus tag: RD110_27025
so part of: sequence
location: complement(11336..13054)
location: region:11336-13054:-1
so has part: feature:11336-13054:-1:exon
subclass of: SO_0000010

position:11336:-1
position: 11336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13054:-1
position: 13054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11336-13054:-1:exon

RD110_RS27025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: trbL
locus tag: RD110_RS27025
old locus tag: RD110_27025
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114051.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MRMPANLKTLALPLFVWLAFFAVDAHAAIDNAGVFDSVLDRYQAAASGWAGVITTAATWLFWTLVVISMVWTFGMMALRKADIGEFFAEFVRFTIFTGFFWWALTNGPNFASSIYASLRQLAGNATGLGNALSPSGIVDVGFAIFDKVMDQSSVWSPVDSMAGILMAVAILVILALVGVNMLLLLASGWVLAYGGVFFLGFGGSRWTSDMAINYYKVVLGVAAQLFAMVLLVGIGKTFLDDYYSRMSAGISLKEMGVMLIVVIILLALVNKIPPLIAGIITGASVGGAGIGQFGAGAALGAAGMAAAAAATGGAALAAGAASAAGGASAVMAAFSKANENVSAGTDVMSAFSGGGSSGGGAGGGGDAGTGSTPFAQAAGFSGSSGGGSSSGGGSPSTGSSSGSSKGGDKGGGKADAGGQGSSSTASTGSSADKAAKNEPKPAGGAGQGQQAAPGSTGPGLLASAASALGTAGRIAADAGANLAKGTADVAKAKAASLREAAAERIADTTGGKIAAAIKAQGSGTAENIDVPDQQPAPSFGDNSLAGGPADADPESEVAAFANREQGRDGTTA
SIO_010081: RD110_RS27025
subclass of: SO_0000673
so part of: RD110_RS27025
location: complement(11336..13054)
location: region:11336-13054:-1
so has part: feature:11336-13054:-1:exon

WP_011114051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11336-13054:-1:exon

RD110_RS27030
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: trbK
locus tag: RD110_RS27030
old locus tag: RD110_27030
so part of: sequence
location: complement(13065..13292)
location: region:13065-13292:-1
so has part: feature:13065-13292:-1:exon
subclass of: SO_0000010

position:13065:-1
position: 13065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13292:-1
position: 13292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13065-13292:-1:exon

RD110_RS27030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: trbK
locus tag: RD110_RS27030
old locus tag: RD110_27030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000644148.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0009292 - horizontal gene transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: entry exclusion lipoprotein TrbK
translation: MKAIKALSLASAALVAALVAGCDNKPATAPMPEVNDENCKPENIAKIEDKGVQQAFSSLCLRRGGDFKPSPKREW
SIO_010081: RD110_RS27030
subclass of: SO_0000673
so part of: RD110_RS27030
location: complement(13065..13292)
location: region:13065-13292:-1
so has part: feature:13065-13292:-1:exon

WP_000644148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13065-13292:-1:exon

RD110_RS27035
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: trbJ
locus tag: RD110_RS27035
old locus tag: RD110_27035
so part of: sequence
location: complement(13302..14066)
location: region:13302-14066:-1
so has part: feature:13302-14066:-1:exon
subclass of: SO_0000010

position:13302:-1
position: 13302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14066:-1
position: 14066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13302-14066:-1:exon

RD110_RS27035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: trbJ
locus tag: RD110_RS27035
old locus tag: RD110_27035
function: mating pair formation and entry exclusion
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000802794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MKPKFLAAKLALVIAVSSTLAVTPVQAGIPVIDGTNLSQNIMTAIESVAQTLKQIEQYSTQLQQYQNQLQNTMAPAAYIWDQAQSTINGLMNAVNTLDYYKTQLGSLDSYIGKFQDVNYYKNSPCFTAAGCSDAERAALRNVAQLASESQKKANDALFKGLDRQQTNLTADAATLQRLQSAAQGAQGQMQAIGYANQLASQQANQLLQIRGLLIAQQNAMATKMQADADKEAQQAAAAAQLRQGSYRASPARTW
SIO_010081: RD110_RS27035
subclass of: SO_0000673
so part of: RD110_RS27035
location: complement(13302..14066)
location: region:13302-14066:-1
so has part: feature:13302-14066:-1:exon

WP_010890135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13302-14066:-1:exon

RD110_RS27040
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27040
old locus tag: RD110_27040
so part of: sequence
location: complement(14087..15508)
location: region:14087-15508:-1
so has part: feature:14087-15508:-1:exon
subclass of: SO_0000010

position:14087:-1
position: 14087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15508:-1
position: 15508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14087-15508:-1:exon

RD110_RS27040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27040
old locus tag: RD110_27040
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MTENADQMAPDASPGEVSKKAGVRRVNNMPMYILGGVLLSFVLVMALVAADRAAKQNAPADGPKEKAGNTSMFAKEIAGDKTGGLIEPASPLKVPDMPTGPASAPLEIARPSNPDAPPAPPANPGNPGQPVNDDEAQRIRMAKMQMFGEAVKAKTTVRVDAPRSNGSAPGGPSTYTGTPQTRDEMLNRIAAVQQQIDAQRSNDPTAAYQARLAQIRGMGVGGGGAAPAAGGMGAGGAPQLLQTSTSGGGRNSMAQFGQGGQGDRWKLDSQPEAPRTPFELRAGFVVPATLISGINSDLPGQIMAQVAQDVYDTPTGKHLLIPQGSRLVGSYSSDVAYGQARVLVAWQRIVFPDGKAMDIGAMPGADSAGYAGFHDQVNNHYVRLFGSAFLMSGVTAGITYSQRQNQATNTYGAPSASSALSEALGQQLGQVTAQLIAKNLSISPTLEIRPGYRFNVVVTKDMTFSKPYRSFDY
SIO_010081: RD110_RS27040
subclass of: SO_0000673
so part of: RD110_RS27040
location: complement(14087..15508)
location: region:14087-15508:-1
so has part: feature:14087-15508:-1:exon

WP_011114050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14087-15508:-1:exon

RD110_RS27045
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27045
old locus tag: RD110_27045
so part of: sequence
location: complement(15513..16001)
location: region:15513-16001:-1
so has part: feature:15513-16001:-1:exon
subclass of: SO_0000010

position:15513:-1
position: 15513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16001:-1
position: 16001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15513-16001:-1:exon

RD110_RS27045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27045
old locus tag: RD110_27045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798704.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbH
translation: MRKIVSLALLALALGLGGCATTSQYGNFVQSAALDQQKLATDAVQQLATLYAPARTRLELQQPTPDPFGQALVKSLRDKGYALLEYAPAGASTQAPASAASQASAPATTAASGGLPLRYVLDQAGDSNLYRLTLMVGNQSITRPYLAQNGTFAPAGYWVRKE
SIO_010081: RD110_RS27045
subclass of: SO_0000673
so part of: RD110_RS27045
location: complement(15513..16001)
location: region:15513-16001:-1
so has part: feature:15513-16001:-1:exon

WP_006122479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15513-16001:-1:exon

RD110_RS27050
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: trbG
locus tag: RD110_RS27050
old locus tag: RD110_27050
so part of: sequence
location: complement(16004..16903)
location: region:16004-16903:-1
so has part: feature:16004-16903:-1:exon
subclass of: SO_0000010

position:16004:-1
position: 16004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16903:-1
position: 16903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16004-16903:-1:exon

RD110_RS27050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: trbG
locus tag: RD110_RS27050
old locus tag: RD110_27050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000753228.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MKKTLSALIVGAAVAVPSLALAAPGDDIADKYFNKTNPTLTAQERAALAIAKRWEAGSATGIKPVAGSGGAIKFVYGAQQPSIVCAVLQVCDVALQPGEQVNSINLGDTARWTVEPAITGSGATEVQHLIIKPMDVGLETSLVVTTNRRSYHFRLRSHRTEYMPQVSFTYPEEAQAKWDAIQRREKQERTDNTLPATGEYLGDLSFDYELSGSASWKPVRVYNDGRKTIIEMPGTMQQTEAPTLLVVRKEGGLFTDDETVLVNYRVQGNRYIVDTVFDRAILIAGVGSSQDRVTISRRK
SIO_010081: RD110_RS27050
subclass of: SO_0000673
so part of: RD110_RS27050
location: complement(16004..16903)
location: region:16004-16903:-1
so has part: feature:16004-16903:-1:exon

WP_006122480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16004-16903:-1:exon

RD110_RS27055
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27055
old locus tag: RD110_27055
so part of: sequence
location: complement(16921..17703)
location: region:16921-17703:-1
so has part: feature:16921-17703:-1:exon
subclass of: SO_0000010

position:16921:-1
position: 16921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17703:-1
position: 17703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16921-17703:-1:exon

RD110_RS27055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27055
old locus tag: RD110_27055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122481.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MSIADTLKGLIFKKPANSAEPRDPRRSKEPLAGGRRAGEAENPYLAARRTWNDHVGGVVSQRQTWQVIGILSLLIALAGVGGVIHIGSQSKFIPYVVEVDKLGQTVAAGPVQAAGKADPRVIHAAVADWMSCARMVSPDVALQRKCVFKAYSMLAPNDPATPKMNEWLNGTPDSSPFKRAEKEMVSVEIKTVIPQTPDTWQVEWVETTRDRQGTLKGQPVTWRALVTTYIAEVTPNTTDEQLRNNPLSIYVRDYSWSRIQ
SIO_010081: RD110_RS27055
subclass of: SO_0000673
so part of: RD110_RS27055
location: complement(16921..17703)
location: region:16921-17703:-1
so has part: feature:16921-17703:-1:exon

WP_006122481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16921-17703:-1:exon

RD110_RS27060
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27060
old locus tag: RD110_27060
so part of: sequence
location: complement(17700..20258)
location: region:17700-20258:-1
so has part: feature:17700-20258:-1:exon
subclass of: SO_0000010

position:17700:-1
position: 17700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20258:-1
position: 20258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17700-20258:-1:exon

RD110_RS27060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27060
old locus tag: RD110_27060
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011013264.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion/conjugal transfer ATPase
translation: MIEAIAIAIAVLGAVLLLILFARIRAVDAELKLKKHRAKDAGLADLLNYAAVVDDGVIVGKNGSFMAAWLYKGDDNASSTEEQREMVSFRINQALAGLGNGWMVHVDAVRRPAPNYSERGVSSFPDSVSFAIDEERRRLFEGLGAMFEGYFVLTVTWFPPVLAQRKFVELMFDDDAVAPDHTARTTGLIAQFKREITSLESRLSSAVKMTRLRGQKVVSEEGREVTHDDFLSWLQFCVTGLHHPVMLPSNPMYLDAVIGGQELWGGVVPKIGRKFIQVVAIEGFPLESTPGVLSALAELPSEYRWSSRFIFMDQHESLKHLDKFRKKWKQKIRGFFDQVFNTNTGSINQDAAAMVGDAEAAIAEVNSGLVAAGYYTSVVVLMDEDRERLAASALLVEKAVNRLAFAARIETINTLDAYLGSLPGHGVENVRRPLINTMNLADLLPTSSIWTGSATAPCPMYPPLSPALMHCVTVGATPFRLNLHVRDLGHTFMFGPTGAGKSTHLGIIAAQLRRYAGMSIYAFDKGMSMYPLAAGIRAATKGKSGLHFTVAADDDRLAFCPLQFLETKGDRAWAMEWIDTILALNGVNTTPAQRNEIGNAIMSMHASGARTLSEFSVTIQDEAIREAIKQYTVDGSMGHLLDAEEDGLSLSDFTVFEIEELMNLGEKFALPVLLYLFRRIERALKGQPSVIILDEAWLMLGHPAFRAKIREWLKVLRKANCLVLMATQSLSDAANSGILDVIVESTATKIFLPNVYARDEDTSALYRRMGLNARQIEILATAIPKRQYYYVSENGRRLYDLALGPMALAFVGASDKESVATIKSLEAKFGHEWVHEWLAGRGLNLNDYLEAA
SIO_010081: RD110_RS27060
subclass of: SO_0000673
so part of: RD110_RS27060
location: complement(17700..20258)
location: region:17700-20258:-1
so has part: feature:17700-20258:-1:exon

WP_011114047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17700-20258:-1:exon

RD110_RS27065
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27065
old locus tag: RD110_27065
so part of: sequence
location: complement(20255..20566)
location: region:20255-20566:-1
so has part: feature:20255-20566:-1:exon
subclass of: SO_0000010

position:20255:-1
position: 20255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20566:-1
position: 20566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20255-20566:-1:exon

RD110_RS27065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27065
old locus tag: RD110_27065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010676131.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MALRAIPIRRAGNRENLFMGGDRELVMFSGLLAGALIFSAQEVRATVFGIALWFGALFALRLMAKADPKLRHVYLRHRRYKPYYPARSTPFRDNTPSQGKQYK
SIO_010081: RD110_RS27065
subclass of: SO_0000673
so part of: RD110_RS27065
location: complement(20255..20566)
location: region:20255-20566:-1
so has part: feature:20255-20566:-1:exon

WP_001207961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20255-20566:-1:exon

RD110_RS27070
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: trbC
locus tag: RD110_RS27070
old locus tag: RD110_27070
so part of: sequence
location: complement(20570..21034)
location: region:20570-21034:-1
so has part: feature:20570-21034:-1:exon
subclass of: SO_0000010

position:20570:-1
position: 20570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21034:-1
position: 21034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20570-21034:-1:exon

RD110_RS27070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: trbC
locus tag: RD110_RS27070
old locus tag: RD110_27070
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer system pilin TrbC
translation: MQATFPAFRLNRNALFYMGLFALLAFFLLAPQHAFASEGTGGSLPYESWLTNLRNSVTGPVAFALSIIGIVVAGGILIFGGELNGFFRTLIFIVLVMALLVGAQNMMSTFFGRGAEIAALTDGALHQVKVAALDVAGFPGEAVMRWAERGHIAG
SIO_010081: RD110_RS27070
subclass of: SO_0000673
so part of: RD110_RS27070
location: complement(20570..21034)
location: region:20570-21034:-1
so has part: feature:20570-21034:-1:exon

WP_011114046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20570-21034:-1:exon

RD110_RS27075
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: trbB
locus tag: RD110_RS27075
old locus tag: RD110_27075
so part of: sequence
location: complement(21051..22013)
location: region:21051-22013:-1
so has part: feature:21051-22013:-1:exon
subclass of: SO_0000010

position:21051:-1
position: 21051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22013:-1
position: 22013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21051-22013:-1:exon

RD110_RS27075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: trbB
locus tag: RD110_RS27075
old locus tag: RD110_27075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000132020.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MTDQKPEHNSIKERAKKKLERDMGPELLAALNDPKTVEIMLNADGKLWLERLGEPMKCIGTLRVAQAQAIIETIAGYHGKEVTRSKPILEGELPLDGSRFAGQLPPVVPAPTFAIRKKAVAIFTLDQYVERGIMTAPQREALIAAVRAHRNILVIGGTGSGKTTLVNAIINEMVIQDPTERVFIIEDTGEIQCAAENYVQYHTSIDVNMTALLKTTLRMRPDRILVGEVRGPEALDLLMAWNTGHEGGAATLHANNAKAGLDRLAMLISMHPDSPKPIEPLIGEAVHVVVHIARVEGSRRIQEILEVSGFANGQYITKTL
SIO_010081: RD110_RS27075
subclass of: SO_0000673
so part of: RD110_RS27075
location: complement(21051..22013)
location: region:21051-22013:-1
so has part: feature:21051-22013:-1:exon

WP_000132020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21051-22013:-1:exon

RD110_RS27080
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27080
old locus tag: RD110_27080
so part of: sequence
location: complement(22323..22685)
location: region:22323-22685:-1
so has part: feature:22323-22685:-1:exon
subclass of: SO_0000010

position:22323:-1
position: 22323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22685:-1
position: 22685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22323-22685:-1:exon

RD110_RS27080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27080
old locus tag: RD110_27080
function: gene regulation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000283041.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MYNYIFFTNVLRLLDERHMTKKELSDRSGVSISFLSDLTTGKANPSLKVMEDIAQALETPLPLLLESTDLDKEALDALAGGKAPRSLPPGFERVAAVLPEHQAFIVKKWGEATRKKLRGS
SIO_010081: RD110_RS27080
subclass of: SO_0000673
so part of: RD110_RS27080
location: complement(22323..22685)
location: region:22323-22685:-1
so has part: feature:22323-22685:-1:exon

WP_010890126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22323-22685:-1:exon

RD110_RS27085
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27085
old locus tag: RD110_27085
so part of: sequence
location: 22799..23140
location: region:22799-23140:1
so has part: feature:22799-23140:1:exon
subclass of: SO_0000010

position:22799:1
position: 22799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23140:1
position: 23140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22799-23140:1:exon

RD110_RS27085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27085
old locus tag: RD110_27085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000019167.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MSHNLFQFIGNLTRDTDVRHSENSARAVFDLAVNRVWRNAAGAKQEQTDFFRIKSFGGLAENAGKYLGKGSKVFVQGRIEPTKYEKDGKTEYGFDFIAEEIEYLDTKAPGGGQ
SIO_010081: RD110_RS27085
subclass of: SO_0000673
so part of: RD110_RS27085
location: 22799..23140
location: region:22799-23140:1
so has part: feature:22799-23140:1:exon

WP_000019167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22799-23140:1:exon

RD110_RS27090
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: trfA
locus tag: RD110_RS27090
old locus tag: RD110_27090
so part of: sequence
location: 23187..24407
location: region:23187-24407:1
so has part: feature:23187-24407:1:exon
subclass of: SO_0000010

position:23187:1
position: 23187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24407:1
position: 24407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23187-24407:1:exon

RD110_RS27090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: trfA
locus tag: RD110_RS27090
old locus tag: RD110_27090
function: initiation of replication
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114072.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication initiator TrfA
translation: MQNEFNEQEYRRKLIEGGLSEADATDLAARTAAARRDSGSAGGAFRPAGSLFELPATAGDNEAALPPKLPTPASAAVERSERMAQESAELARTMGLPPEPRTAVNKMAEQIGALAQDKRSSAMATKKRTAGGELAEKVSEAKQTALLKHTKQQIKDMQLSLFDLAPWPDHMRALPNDFGRSAIFTVRNKKVPRAALQGQSIYHVNKDVEITYTGIELRADDDELVFAQVLEYAKRTALGEPVSFTFYELCQDLDWSINGRYYTRAEECLTRLQASAMQFSSQRIGRLESVSLIRRFRVLDRGKRTSRCQVEIDAEIVVLFAGDHYTKFVWEKYRKLSPTARRMFDYFATHKEPYPLKLETFRLMCGSDSTRPKKWREQVGEACDELRENGLVESAWVNDDLVHCKR
SIO_010081: RD110_RS27090
subclass of: SO_0000673
so part of: RD110_RS27090
location: 23187..24407
location: region:23187-24407:1
so has part: feature:23187-24407:1:exon

WP_011114072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23187-24407:1:exon

RD110_RS27105
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27105
old locus tag: RD110_27105
so part of: sequence
location: complement(25730..26044)
location: region:25730-26044:-1
so has part: feature:25730-26044:-1:exon
subclass of: SO_0000010

position:25730:-1
position: 25730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26044:-1
position: 26044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25730-26044:-1:exon

RD110_RS27105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27105
old locus tag: RD110_27105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011117139.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MSYAVVFSPEAEEQLAELYRYIAAAASPDVAARYTEAIVTYCESLRTFPLRGTMRDDVRPGLRITNYRKRAVIAFDVAGDLVSIIGVFYGGQDYESILHDDADD
SIO_010081: RD110_RS27105
subclass of: SO_0000673
so part of: RD110_RS27105
location: complement(25730..26044)
location: region:25730-26044:-1
so has part: feature:25730-26044:-1:exon

WP_011117139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25730-26044:-1:exon

RD110_RS27110
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27110
old locus tag: RD110_27110
so part of: sequence
location: complement(26041..26310)
location: region:26041-26310:-1
so has part: feature:26041-26310:-1:exon
subclass of: SO_0000010

position:26041:-1
position: 26041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26310:-1
position: 26310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26041-26310:-1:exon

RD110_RS27110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27110
old locus tag: RD110_27110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012207631.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MRTTQQLSITLPNDMADVVKTKVKTGEYASESEVIRDGLRALLARDRAVESWLHNQVGPAYDALKADPSRAVTADQVRARLAAEHAKAQ
SIO_010081: RD110_RS27110
subclass of: SO_0000673
so part of: RD110_RS27110
location: complement(26041..26310)
location: region:26041-26310:-1
so has part: feature:26041-26310:-1:exon

WP_001260984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26041-26310:-1:exon

RD110_RS27115
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27115
old locus tag: RD110_27115
so part of: sequence
location: 26479..26907
location: region:26479-26907:1
so has part: feature:26479-26907:1:exon
subclass of: SO_0000010

position:26479:1
position: 26479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26907:1
position: 26907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26479-26907:1:exon

RD110_RS27115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27115
old locus tag: RD110_27115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011137973.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antirestriction protein
translation: MNTQDQPVTASLVAEAQRLDFLPTYFGPRLMMRGEALVYAWLRRLCERYNGAYWHYYTLSDGGFYLAPDLAERLEIEVDGNGFRGELSADAAGIVATLFALGQLAAEIAGTDAADALIDRYHFLRGFAAGHPEAAAIYRAID
SIO_010081: RD110_RS27115
subclass of: SO_0000673
so part of: RD110_RS27115
location: 26479..26907
location: region:26479-26907:1
so has part: feature:26479-26907:1:exon

WP_001095942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26479-26907:1:exon

RD110_RS27120
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27120
old locus tag: RD110_27120
so part of: sequence
location: 26959..28164
location: region:26959-28164:1
so has part: feature:26959-28164:1:exon
subclass of: SO_0000010

position:26959:1
position: 26959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28164:1
position: 28164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26959-28164:1:exon

RD110_RS27120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27120
old locus tag: RD110_27120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein KlcB
translation: MAKRTKQPAQAGQDWSAPAAELLAELPADRDGLLAAAVAAVVEIDAAVMRGDGAAAELAGDRYEAIIWKLNGGTNFGCMADDEAAGRVIERHCAAVPGDVPLWGQRGQFLAVAGDVRALVEYEAGYGGPLNAHFQFHAVDLDRPFISATGYRSHFDTARGCMTVDEVARGILTAMLAEKKRPVLIEANYRDRLADAPLPDWLAGLVPPARREPATVTIPPGFVLVDVVLPAHKAFIARRWAAEAAGKVKAARAARSNAKGKAGGRERDPASAETAMRCSTAKADDCKAEAGPVSPEATMPGAGEASCSTARNGDAGPADLVEFTPAPGQRCEIVSVHHPVFAKEIGKRVIIVKVHPDTRQVWAHDDRPVTYKTNRAGRRVVDSDPSCIQSIYGFDQLRLIT
SIO_010081: RD110_RS27120
subclass of: SO_0000673
so part of: RD110_RS27120
location: 26959..28164
location: region:26959-28164:1
so has part: feature:26959-28164:1:exon

WP_011405605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26959-28164:1:exon

RD110_RS27125
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: korC
locus tag: RD110_RS27125
old locus tag: RD110_27125
so part of: sequence
location: 28181..28438
location: region:28181-28438:1
so has part: feature:28181-28438:1:exon
subclass of: SO_0000010

position:28181:1
position: 28181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28438:1
position: 28438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28181-28438:1:exon

RD110_RS27125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: korC
locus tag: RD110_RS27125
old locus tag: RD110_27125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011117141.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor KorC
translation: MTNDANIRLECLKPAERWAQPSGEEVREVLRLAGLTGGKAAKVLGLGPKGDRTIRRWVGEDTPIPYAAWALLCDYAGLGLIWKEA
SIO_010081: RD110_RS27125
subclass of: SO_0000673
so part of: RD110_RS27125
location: 28181..28438
location: region:28181-28438:1
so has part: feature:28181-28438:1:exon

WP_011117141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28181-28438:1:exon

RD110_RS27130
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: kleA
locus tag: RD110_RS27130
old locus tag: RD110_27130
so part of: sequence
location: 28598..28834
location: region:28598-28834:1
so has part: feature:28598-28834:1:exon
subclass of: SO_0000010

position:28598:1
position: 28598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28834:1
position: 28834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28598-28834:1:exon

RD110_RS27130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: kleA
locus tag: RD110_RS27130
old locus tag: RD110_27130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015913627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stable inheritance protein KleA
translation: MSKNKIMPWVDALPNVEATDFQARRDQIEATMAEAAELVKQAEELRGKAYFAALSLEASAKGEWSSQAVEQAKRSVGW
SIO_010081: RD110_RS27130
subclass of: SO_0000673
so part of: RD110_RS27130
location: 28598..28834
location: region:28598-28834:1
so has part: feature:28598-28834:1:exon

WP_000041932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28598-28834:1:exon

RD110_RS27135
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27135
old locus tag: RD110_27135
so part of: sequence
location: 28893..29108
location: region:28893-29108:1
so has part: feature:28893-29108:1:exon
subclass of: SO_0000010

position:28893:1
position: 28893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29108:1
position: 29108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28893-29108:1:exon

RD110_RS27135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27135
old locus tag: RD110_27135
function: plasmid maintenance
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890114.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2688 domain-containing protein
translation: MSKGKIEIIETCCRRCGKSIRTLSHTIIGADDAREKFGSICGGCITPEEDNELTEMLLAAAVRRMSGATLQ
SIO_010081: RD110_RS27135
subclass of: SO_0000673
so part of: RD110_RS27135
location: 28893..29108
location: region:28893-29108:1
so has part: feature:28893-29108:1:exon

WP_010890114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28893-29108:1:exon

RD110_RS27140
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: kleE
locus tag: RD110_RS27140
old locus tag: RD110_27140
so part of: sequence
location: 29253..29582
location: region:29253-29582:1
so has part: feature:29253-29582:1:exon
subclass of: SO_0000010

position:29253:1
position: 29253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29582:1
position: 29582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29253-29582:1:exon

RD110_RS27140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: kleE
locus tag: RD110_RS27140
old locus tag: RD110_27140
function: plasmid maintenance
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012478184.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KleE stable inheritance protein
translation: MSNIVKFPRASKPPAPEPVQPAAPAAAPAAPKAEGRGLVAGLVKFVWVATVLVWPVLKWVLAIITFFQFVRMLYHWNTPGVYAGWSFLAYFAALTAITYFVSIYKPKGL
SIO_010081: RD110_RS27140
subclass of: SO_0000673
so part of: RD110_RS27140
location: 29253..29582
location: region:29253-29582:1
so has part: feature:29253-29582:1:exon

WP_010890113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29253-29582:1:exon

RD110_RS27145
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27145
old locus tag: RD110_27145
so part of: sequence
location: 29584..30114
location: region:29584-30114:1
so has part: feature:29584-30114:1:exon
subclass of: SO_0000010

position:29584:1
position: 29584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30114:1
position: 30114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29584-30114:1:exon

RD110_RS27145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27145
old locus tag: RD110_27145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890112.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2761 domain-containing protein
translation: MAKQTLPYPPGFVEPTTGRVAVLVREYADSDLNGDAPAYWYSAQSEEWGLDPWRLVEGVDPHVGGGSFDVCFASGGTRTVGPLMTFFLSAAHAAQLIDAKGEELALQRATLAVIADGLGLPAKALRIEAKVEGRPAVFYDQDGATLCACAVDSDHWRQARATAATASAIDKARTNF
SIO_010081: RD110_RS27145
subclass of: SO_0000673
so part of: RD110_RS27145
location: 29584..30114
location: region:29584-30114:1
so has part: feature:29584-30114:1:exon

WP_011117143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29584-30114:1:exon

RD110_RS27150
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27150
old locus tag: RD110_27150
so part of: sequence
location: 30228..30530
location: region:30228-30530:1
so has part: feature:30228-30530:1:exon
subclass of: SO_0000010

position:30228:1
position: 30228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30530:1
position: 30530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30228-30530:1:exon

RD110_RS27150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27150
old locus tag: RD110_27150
function: regulation of gene expression
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator KorA
translation: MKKRLTEAQFQTAIKGLEIGQQTIDIARGVLVDGRPQAEFVTSLGLTKGAVSQAVSRVWAAAGEQLPEGFERVTAVLPEHQAFIVKKWEADAKRKQEPKS
SIO_010081: RD110_RS27150
subclass of: SO_0000673
so part of: RD110_RS27150
location: 30228..30530
location: region:30228-30530:1
so has part: feature:30228-30530:1:exon

WP_010890110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30228-30530:1:exon

RD110_RS27155
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27155
old locus tag: RD110_27155
so part of: sequence
location: 30527..31291
location: region:30527-31291:1
so has part: feature:30527-31291:1:exon
subclass of: SO_0000010

position:30527:1
position: 30527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31291:1
position: 31291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30527-31291:1:exon

RD110_RS27155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27155
old locus tag: RD110_27155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114061.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKTLVTAIQKGGQGKTFATCHLAFDFLERGLRVAVIDLDTQGNASFTLSAYQSGYLASQLFTGDTDDLRYWFGKREGESLALIAADANLANLDKMELSQAAAALRASVAALGEFFDVCLIDTAPSLGVAMTAAVLTADYMLSPIEMEAYSLQGMKKMVAVISNLRKQNPKLRFLGMVPNKVDARKPRHVNNLATLQQAYPQLILPFSIGARDSIAEALGEQMPVWKIKKTAARKATQEVRALADYVFTKMEIAQ
SIO_010081: RD110_RS27155
subclass of: SO_0000673
so part of: RD110_RS27155
location: 30527..31291
location: region:30527-31291:1
so has part: feature:30527-31291:1:exon

WP_000855329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30527-31291:1:exon

RD110_RS27160
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27160
old locus tag: RD110_27160
so part of: sequence
location: 31288..32337
location: region:31288-32337:1
so has part: feature:31288-32337:1:exon
subclass of: SO_0000010

position:31288:1
position: 31288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32337:1
position: 32337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31288-32337:1:exon

RD110_RS27160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27160
old locus tag: RD110_27160
function: DNA binding protein involved in transcriptional regulation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890108.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MSAKTNAKKKEQDKPQSSGLGLDGLGDLAGLLNEQPAANAGGAGPQELPLDLIDEDPHQPRTADNPGFSPESIAEIGETIKARGVKSPISVRENPDAPGRYLINHGARRYRGSKWAHKTTIPAFIDNDYNEADQVIENLQRNELTAREIADFIGRELAKGKKKGEIAKEIGKSPAFVTQHVTLLDLPEPIAEAFNSGRGKDVTVINELVTAYKKNPDEVAAWLADDSQELTRGSVKLLREFLEDKRSHEDGDRDPNTVDALTGKTDAEAGDGEQGPQDDDAKGKKEPKEADPDKLKKAIIQVKHDDRPARLILNRRPPAEGWAWLKYEDDGQEFEADLGTVQLVALLEG
SIO_010081: RD110_RS27160
subclass of: SO_0000673
so part of: RD110_RS27160
location: 31288..32337
location: region:31288-32337:1
so has part: feature:31288-32337:1:exon

WP_011114060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31288-32337:1:exon

RD110_RS27165
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27165
old locus tag: RD110_27165
so part of: sequence
location: 32517..33548
location: region:32517-33548:1
so has part: feature:32517-33548:1:exon
subclass of: SO_0000010

position:32517:1
position: 32517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33548:1
position: 33548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32517-33548:1:exon

RD110_RS27165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27165
old locus tag: RD110_27165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011342948.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MAISKEQIFAVADELDAAGQNPTLANVRKQLGSGSFTTISEAMNEWRARKASQAAPIREPAPQAITDKLAELGGDLWAVALEMANNRLAAEREALEAVRQETEAARQEAAELADQLTGELDEAKARVAALEAVEAAAKGEADELRGKLAATSERAATAEARAGELRTELDHAHQEARQARAERDKAQERATASADQVEALRADLAAANSRTAEIERRAGELRADLERANQATDQARAAQAEQRKATEAAAAERDQVRAELVKVQAKAEAAEQAHQEQRKAMAAEAHRQAERLTAAQGERDQAKRDAAQAREEAAGLRGRLEALETVMAQGRAADPTSGGRKKT
SIO_010081: RD110_RS27165
subclass of: SO_0000673
so part of: RD110_RS27165
location: 32517..33548
location: region:32517-33548:1
so has part: feature:32517-33548:1:exon

WP_011117145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32517-33548:1:exon

RD110_RS27170
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27170
old locus tag: RD110_27170
so part of: sequence
location: 33719..34066
location: region:33719-34066:1
so has part: feature:33719-34066:1:exon
subclass of: SO_0000010

position:33719:1
position: 33719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34066:1
position: 34066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33719-34066:1:exon

RD110_RS27170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27170
old locus tag: RD110_27170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000664557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKERLLVMNGQRIVQAEKDGAWTNQKVDKAGALKPGIYNLYTAQAADKKQTHAGVIVHADATNVYQQIGKNFVMHARSDFDKVPEIGSAKSISYNAQGKAAVAAEAPKLTRGRSM
SIO_010081: RD110_RS27170
subclass of: SO_0000673
so part of: RD110_RS27170
location: 33719..34066
location: region:33719-34066:1
so has part: feature:33719-34066:1:exon

WP_000664557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33719-34066:1:exon

RD110_RS27175
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27175
old locus tag: RD110_27175
so part of: sequence
location: 34095..34748
location: region:34095-34748:1
so has part: feature:34095-34748:1:exon
subclass of: SO_0000010

position:34095:1
position: 34095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34748:1
position: 34748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34095-34748:1:exon

RD110_RS27175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27175
old locus tag: RD110_27175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000826922.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRLTIPGSGTESRATKPARVSAPATLGGAAFGASREDTGADLLEAAQAAEIEQQATLEAAPVEQSYPETLALYVQAKHDQVEHIEDRLENLIDRQQARLQQTQASAPGRLSLPGSKRAWQNQQAQQQARLQTLHARLEAVREIKEGMGLHSPKIEELATRKMRAENPELASDWDAMREAARRHELLMRKQEQERKQSQAQERPGRSQSLGLSARPA
SIO_010081: RD110_RS27175
subclass of: SO_0000673
so part of: RD110_RS27175
location: 34095..34748
location: region:34095-34748:1
so has part: feature:34095-34748:1:exon

WP_000826922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34095-34748:1:exon

RD110_RS27180
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27180
old locus tag: RD110_27180
so part of: sequence
location: complement(34951..35391)
location: region:34951-35391:-1
so has part: feature:34951-35391:-1:exon
subclass of: SO_0000010

position:34951:-1
position: 34951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35391:-1
position: 35391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34951-35391:-1:exon

RD110_RS27180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27180
old locus tag: RD110_27180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000718516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraM
translation: MAADDKIEELIREIAAKHGIAVGRDDPILILQTINMKLMQDSASAQQEILDAFKSELESIAHRWGDDAKGKAERTLNAALAASKDAMTRGMQEGAKAAAEAVRREVEAVTAQLVAPIREARRVAMMNMVAAGMAVVAAGLALWASL
SIO_010081: RD110_RS27180
subclass of: SO_0000673
so part of: RD110_RS27180
location: complement(34951..35391)
location: region:34951-35391:-1
so has part: feature:34951-35391:-1:exon

WP_000718516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34951-35391:-1:exon

RD110_RS27185
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27185
old locus tag: RD110_27185
so part of: sequence
location: complement(35391..36116)
location: region:35391-36116:-1
so has part: feature:35391-36116:-1:exon
subclass of: SO_0000010

position:36116:-1
position: 36116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35391-36116:-1:exon

RD110_RS27185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27185
old locus tag: RD110_27185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011304098.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MAKIHMVLQGKGGVGKSMIAATIAQYKAGKGQKPLCIDTDPVNATFEGYKALNVRRLNIMDGDEINTRNFDALVEMIASAEGDVIIDNGASSFVPLSHYLISNQVPALLQDMGHELVVHTVVTGGQALVDTVSGFAQLASQFPAECLFVVWLNPYWGPIEHEGKGFEQLKAYTANKGRVSAIIQIPALKEETYGRDFAEMLQDRRTFDEALADSALTIMTRQRLKIVKTQLFAQLENAAVL
SIO_010081: RD110_RS27185
subclass of: SO_0000673
so part of: RD110_RS27185
location: complement(35391..36116)
location: region:35391-36116:-1
so has part: feature:35391-36116:-1:exon

WP_001062597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35391-36116:-1:exon

RD110_RS27190
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27190
old locus tag: RD110_27190
so part of: sequence
location: complement(36116..36514)
location: region:36116-36514:-1
so has part: feature:36116-36514:-1:exon
subclass of: SO_0000010

position:36514:-1
position: 36514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36116-36514:-1:exon

RD110_RS27190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27190
old locus tag: RD110_27190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001127128.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraK family protein
translation: MPKTYPEELAEWVKGREAKKPRQDKHVVAFLAVKSDVQAALDAGYAMKTIWEHMKETGRLRCRYETFTQHVKRYIKAAPVASPPPPATPPDSQPKGAKPEPKAAPPASESKSEPPKIGGFTFDATPKKEDLL
SIO_010081: RD110_RS27190
subclass of: SO_0000673
so part of: RD110_RS27190
location: complement(36116..36514)
location: region:36116-36514:-1
so has part: feature:36116-36514:-1:exon

WP_001127128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36116-36514:-1:exon

RD110_RS27195
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: traJ
locus tag: RD110_RS27195
old locus tag: RD110_27195
so part of: sequence
location: 36888..37262
location: region:36888-37262:1
so has part: feature:36888-37262:1:exon
subclass of: SO_0000010

position:36888:1
position: 36888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37262:1
position: 37262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36888-37262:1:exon

RD110_RS27195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: traJ
locus tag: RD110_RS27195
old locus tag: RD110_27195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000426567.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer transcriptional regulator TraJ
translation: MENDEKEHGRRRRQHLRVPVFPEEKDEIEANAKRAGVSVARYLRDVGQGYQIKGVMDYQHVRELVRVNGDLGRLGGLLKLWLTDDVRTLQFGEATILALLGRIEATQDEMSRIMKAVVQPRAEP
SIO_010081: RD110_RS27195
subclass of: SO_0000673
so part of: RD110_RS27195
location: 36888..37262
location: region:36888-37262:1
so has part: feature:36888-37262:1:exon

WP_000426567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36888-37262:1:exon

RD110_RS27200
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27200
old locus tag: RD110_27200
so part of: sequence
location: 37297..39537
location: region:37297-39537:1
so has part: feature:37297-39537:1:exon
subclass of: SO_0000010

position:37297:1
position: 37297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39537:1
position: 39537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37297-39537:1:exon

RD110_RS27200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27200
old locus tag: RD110_27200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011137971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MIAKHVPMRSLGKSDFAGLANYITDAQSKDHRLGHVQATNCEAGSIQDAITEVLATQHTNTRAKGDKTYHLIVSFRAGEQPSADTLRAIEERICVGLGYGEHQRISAVHNDTDNLHIHIAINKIHPTRHTMHEPYYPHRALAELCTALERDYGLERDNHEPRKRGAEGRAADMERHAGVESLVGWVKRECLDEIKGAQSWQELHQVMRDNGMELRVRANGLVFEAGDGTMVKASTVARDLSKPSLEARLGPFEASPERQAQTTAKRQYRKDPIRLRVNTVELYAKYKAEQQNLTTARAQALERARHRKDRLIEAAKRSNRLRRATIKVVGEGRANKKLLYAQASKALRSEIQAINKQFQQERTALYAEHRRRTWADWLKKEAQHGGADALAALRAREAAQGLKGNTIRGEGQAKPGHAPAVDNITKKGTIIFRAGMSAVRDDGDRLQVSREATREGLQEALRLAMQRYGNRITVNGTVEFKAQMIRAAVDSQLPITFTDPALESRRQALLNKENTHERTERPEHRGRTGRGAGGPGQRPAADQHATGAAAVARAGDGRPAAGRGDRADAGLHAATVHRKPDVGRLGRKPPPQSQHRLRALSELGVVRIAGGSEVLLPRDVPRHVEQQGTQPDHALRRGISRPGTGVGQTPPGVAAADKYIAEREAKRLKGFDIPKHSRYTAGDGALTFQGTRTIEGQALALLKRGDEVMVMPIDQATARRLTRIAVGDAVSITAKGSIKTSKGRSR
SIO_010081: RD110_RS27200
subclass of: SO_0000673
so part of: RD110_RS27200
location: 37297..39537
location: region:37297-39537:1
so has part: feature:37297-39537:1:exon

WP_011117146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37297-39537:1:exon

RD110_RS27205
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27205
old locus tag: RD110_27205
so part of: sequence
location: 39534..41447
location: region:39534-41447:1
so has part: feature:39534-41447:1:exon
subclass of: SO_0000010

position:39534:1
position: 39534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41447:1
position: 41447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39534-41447:1:exon

RD110_RS27205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27205
old locus tag: RD110_27205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655356.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MKIKMNNAVGPQVRTAKPKPSKLLPVLGAASMVGGLQAATQFFAHTFAYHATLGPNVGHVYAPWSILHWTYKWYSQYPDEIMKAGSMGMLVSTVGLLGVAVAKVVTSNSSKANEYLHGSARWAEKKDIQAAGLLPRERNVLEIVTGKAAPTATGVYVGGWQDKDGNFFYLRHSGPEHVLTYAPTRSGKGVGLVVPTLLSWGASSVITDLKGELWALTAGWRQKHAKNKVLRFEPASTSGGVCWNPLDEIRLGTEYEVGDVQNLATLIVDPDGKGLDSHWQKTAFALLVGVILHALYKAKDDGGTATLPSVDAMLADPNRDIGELWMEMATYGHVDGQNHHAIGSAARDMMDRPEEEAGSVLSTAKSYLALYRDPVVARNVSRSDFRIKQLMHEDDPVSLYIVTQPNDKARLRPLVRVMVNMIVRLLADKMDFEGGRPVAHYKHRLLMMLDEFPSLGKLEIMQESLAFVAGYGIKCYLICQDINQLKSRETGYGHDESITSNCHVQNAYPPNRVETAEHLSRLTGQTTVVKEQITTSGRRTAAMLGQVSRTYQEVQRPLLTPDECLRMPGPKKNAQGEIEEAGDMVIYVAGYPAIYGKQPLYFKDPVFSARAAIPAPKVSDRLRAVAQAETEGEGITI
SIO_010081: RD110_RS27205
subclass of: SO_0000673
so part of: RD110_RS27205
location: 39534..41447
location: region:39534-41447:1
so has part: feature:39534-41447:1:exon

WP_000694765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39534-41447:1:exon

RD110_RS27210
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: traF
locus tag: RD110_RS27210
old locus tag: RD110_27210
so part of: sequence
location: 41444..41980
location: region:41444-41980:1
so has part: feature:41444-41980:1:exon
subclass of: SO_0000010

position:41444:1
position: 41444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41980:1
position: 41980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41444-41980:1:exon

RD110_RS27210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: traF
locus tag: RD110_RS27210
old locus tag: RD110_27210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000086826.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer signal peptidase TraF
translation: MSRILKRIAAGVVIAGVAALLLAAGGYAAGARVNTTKSIPVGLYWTSSAPVEKGAYVLFCPPQLGVFDDAKERGYIGAGFCQGGYGYMMKRVLAAKDDAVAVADDGVRVNGELLPLSAPIKADKAGRPLPRYQSNSYTLGNSEVLLMSDVSATSFDGRYFGPINRSQIKTVIRPVITW
SIO_010081: RD110_RS27210
subclass of: SO_0000673
so part of: RD110_RS27210
location: 41444..41980
location: region:41444-41980:1
so has part: feature:41444-41980:1:exon

WP_006122512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41444-41980:1:exon

RD110_RS27215
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27215
old locus tag: RD110_27215
so part of: sequence
location: 41992..44055
location: region:41992-44055:1
so has part: feature:41992-44055:1:exon
subclass of: SO_0000010

position:41992:1
position: 41992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44055:1
position: 44055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41992-44055:1:exon

RD110_RS27215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27215
old locus tag: RD110_27215
EC number: 5.6.2.1
function: involved in conjugative DNA transfer
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase III
translation: MRLFIAEKPSVAKAIAGELGATGKGDGFIECGTDKVTWCFGHMLEQADPDEYTPDDVPRGQSGKKVWRVDELPIIPESWILKPKDDAKKQLAVIGKLLKEAKEIVNAGDPDREGQLLVDEVLEHFRNSKPVRRFWVSAQDSVSVKRGLAALKENTTYAGWADAARGRQRADWLIGMNLSRAYTLRAQRGGSRALLTVGRVQTPTLALVVARDREIEAFKAVPYHTIRAVVQHAGGSFAAAWKAKEDQAGLDSEGRLVDTAVADALVAAVKGQPGTIAAYKQEAKKQNQPLAFALSDITALASAKFGYSAEDVLNTCQALYETHKLTSYPRTDCAYLPESQHADAPRVLEAIKHVNPELAGLVDGADPRIKSKTWDDSKITAHHGIVPTMQKGSKAALSERERNIYDLIVRAYLAQFYPLHEYMQTTVGVEIAGENFAASGKVVTRNGWRDVYSQADEEGEKDEDDDSGTQALPSMAQGDAVTCTDATRKDAKTKPPARFTEGTLIRAMENIHKFVSDAEHKKMLREGDGIGTSATRASIISELKRREFLAVKGKQIISTTLGRSVIDALPEVVKSPVLTALYERMLKGVEQGTAALDAFITKQETFIRDQVAKANSGAVTIAGGKEAAPVSSLHKCMACGSGLSRRPSKKKGQFWWGCSNFPTCKQTYPDLKGRPDYSKGRNGPASE
SIO_010081: RD110_RS27215
subclass of: SO_0000673
so part of: RD110_RS27215
location: 41992..44055
location: region:41992-44055:1
so has part: feature:41992-44055:1:exon

WP_011114056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41992-44055:1:exon

RD110_RS27220
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27220
old locus tag: RD110_27220
so part of: sequence
location: 44077..44466
location: region:44077-44466:1
so has part: feature:44077-44466:1:exon
subclass of: SO_0000010

position:44077:1
position: 44077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44466:1
position: 44466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44077-44466:1:exon

RD110_RS27220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27220
old locus tag: RD110_27220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122510.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein TraD
translation: MNEQTTTNTAAHDEPLAVLPPVDDDAAGREAVREKMADALTPGFQVEFDPDEAERVGAFVEDALSEQDAAASGDDLVEVDGALEPAFLDDEGPSADIPPFITTTNARELYDLRPGETVAQAAARKASEG
SIO_010081: RD110_RS27220
subclass of: SO_0000673
so part of: RD110_RS27220
location: 44077..44466
location: region:44077-44466:1
so has part: feature:44077-44466:1:exon

WP_006122510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44077-44466:1:exon

RD110_RS27225
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27225
old locus tag: RD110_27225
so part of: sequence
location: 44470..48816
location: region:44470-48816:1
so has part: feature:44470-48816:1:exon
subclass of: SO_0000010

position:44470:1
position: 44470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48816:1
position: 48816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44470-48816:1:exon

RD110_RS27225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27225
old locus tag: RD110_27225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122509.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MPITKAEAQGVTRAFVRDYPGALELAYKFREDAAELYGPRAAEVPADMKGGYVPKETLHAGRAYRGRVDVPLQNVESASDLLMTLRHEVLGHYGANTFAPGEKRALLDGLAAARNEPTLKPLWDDVNRRYAGQSLDVRAEEVFALHCEGIEPSQHQVADQVQQRGQQSFTETCIARVRPMQADDLHNIVCMVAQGLRDRSRTQQNFPQFNELFRRDENMEPKKPFHEVVAEKLIEQLKAGTAPWQKPWEPGEPNAYLPMNPTTGKRYKGINAIHLMAQGRSDARWMTYKQAAAVGAQVRKGEKGTPVQYWKFSEEQDKLDDSGRPVLDAKGQPVKETVMLERPRVFFATVFNGEQIDGLPPLQPKKEQTWNAVERAEHILKASGATITHAAGDRAFYRPSTDSITLPERGQFPSSDRYYATALHELGHWTGHASRLDRDLAHPFGSEGYAKEELRAEIASMIVGDELGIGHDPGQHAAYVGSWIKALQDEPLEVFRAAADAEKIHDYVLAFEQKQVQEQDQQQSQAQDEAVAQALAVDIAEVLDNPDVSFSHYQAFQGDTLEDALRSRGLETVGSITGTDPEQFYAVAHDRLSPVFGIDPSHTDTDNAYLERKGLAQEFANMAEQLHLAQQLQQHGEQIVSSIDAEARWSDGQRIFAFHDQDGEPHQVRSLDELNNYAPDQLMALPALTQQQAAVADQEANMTPPTNDQAAALLAAHPADAVQGIEQAAAARRQLAAGEIDGQAFADATRQHLGVELPPDWSGELRIVGVAEQDGQTVDAAQAGIEPQAFQVYARKADAQFGEDAFAFVAGTRTEGQAEALAERLHLVDALGTDNQHERAAKLARVQEERVRRDPNATEEDISAAKEARKTAEASAMLNDSDAQRRAAELERQERERQQAQPQAEKPERQYINVPYKEKDEAKSLGARWDRQQQSWYVPPGTDAAPFAKWAQGAATAAVEPRSAQPAPEAQGEAQKPAQQAQQARQYLAVPYEQRNAAKAAGALWDKAAKSWYVGPRADAAKLERWKPENVQAQQGPAMTPREEFAEAMRSAGLFTGSNAQGDHPIMDGKRHRVPVEGGKKGALDGFYVGHLDGHPAGRIINNKTGTDITWKSKGYALSDQEKAKLQAEAAEKLAQRAVEQDKAQEATAQRVGRQMADLVPIEQPTPYLQAKGIQAQAGVMTDREGQKTYIPAFDAEGKQWTMQYIQEDGTKRFAKDSKKEGCFHPVGGMDALAAAPALVISEGYATAAQVAEAVGHATVAAFDSGNLEAVAKALHAKFPDKPVIIAGDDDRHLVMTHGNNPGREKAEAAAQAVGGKAIFPIFAPAENTYPRDLPAITPDSFKTHLRAEQRLADAAAGKVELAGDEAAKLKASMLSGAQIAALSTMKQHTDFNDLAHKSELGIEGVKRQIGAAISQVQRDEQQHQEQKHVEKKQQQIEQRPRRAARIG
SIO_010081: RD110_RS27225
subclass of: SO_0000673
so part of: RD110_RS27225
location: 44470..48816
location: region:44470-48816:1
so has part: feature:44470-48816:1:exon

WP_011117147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44470-48816:1:exon

RD110_RS27235
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27235
old locus tag: RD110_27235
so part of: sequence
location: 49107..52022
location: region:49107-52022:1
so has part: feature:49107-52022:1:exon
subclass of: SO_0000010

position:49107:1
position: 49107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52022:1
position: 52022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49107-52022:1:exon

RD110_RS27235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27235
old locus tag: RD110_27235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558120.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3-like element IS1071 family transposase
translation: MQGWHTTFLGMRGLPRDISDFEMKAFFTFDGAERDAINARRGDSHKLGLALHIGFLRMSGRLLGAFRVIPVALWRHLGNELGIAAPEVASLRAMYERGRTLFDHQQVACTVLGFQWMSEHQRRSLVRELRDEVARCADRDQLLVRARQWLYKNKLVIVHERAIRTLIAAALAQLEVETGTAIAASVDPATLDRWRASVSELRPDGQTQQSWLWAAPAKHSTRQISEVLERIDLLYTLDVHKHLADIPDLILRRYARRLVSRPPSAGAKIKEPARTVEVACFLRYCLFTTTDQLILMVQRRIADLWRQAAADVPATVNWAAMYKTLLGELVALSAQGAVPDAELRARLEALITETQKRKPPSRASLVREGLIDGIRPVRSLLVAIAKLPWQATGEHPAIEYLAKLQALYLKGSRKLPVEVVAPSLGMIWQVSISSPDRERAFQALEVATLFALRRAVRNGSVWIEHSLSFRGRARLFFTDERWQAESKKHYARLSLPSKAATFLKPLLARVTAGVDAVAAAARSGVLRVDDELHLSPLPAEDEDPEVTKLRAALDHRIGEVQLPEVILAVDAQVRFSWIMLGREPRSTDELLMVYAGIMAHGTSLTAVECARMIPQLSATSIRQAMRWARDERRLSQACQAVLEFMQRHPIAATWGRSDLASSDMMSMETTKRVWQARLDPRRNTPSIGIYSHVKDRWGIFHAQPFVLNERQAGVAIEGVIRQEKLETSQLAVDTHGYTDFAMSHARLLGFDLCPRLKELKQRHLFVPRGTKVPAEIAAVCEANVDVALIEKHWDSLVHLAASVMSGHASAVAALARFGSAAQGDPIYEAGVQLGRLLRTAFLADYFVKDAFRNELRRVLNRGEAVNALKRAIYTGRISPAQAKRVDEMQAVADALSLMANIVMAWNTSQMQAVLDRWSNRRQVIPPELIGKIAPTKLESINLRGVFRFPVDRYADQILPSRPNASITGTNG
SIO_010081: RD110_RS27235
subclass of: SO_0000673
so part of: RD110_RS27235
location: 49107..52022
location: region:49107-52022:1
so has part: feature:49107-52022:1:exon

WP_044402914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49107-52022:1:exon

RD110_RS27240
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27240
old locus tag: RD110_27240
pseudo: true
so part of: sequence
location: <52166..52759
location: region:52166-52759:1
so has part: feature:52166-52759:1:exon
subclass of: SO_0000010

position:52166:1
position: 52166
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:52759:1
position: 52759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52166-52759:1:exon

RD110_RS27240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27240
old locus tag: RD110_27240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012838311.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
SIO_010081: RD110_RS27240
subclass of: SO_0000673
so part of: RD110_RS27240
location: <52166..52759
location: region:52166-52759:1
so has part: feature:52166-52759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52166-52759:1:exon

RD110_RS27245
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27245
old locus tag: RD110_27245
so part of: sequence
location: 52868..54415
location: region:52868-54415:1
so has part: feature:52868-54415:1:exon
subclass of: SO_0000010

position:52868:1
position: 52868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54415:1
position: 54415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52868-54415:1:exon

RD110_RS27245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27245
old locus tag: RD110_27245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008328818.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS91-like element ISPps1 family transposase
translation: MSATSKPKLYNPRHPERTLLYQTVAEHYETWLELASAGQFDGQGDHHTPKPFVRKAFAKYLECGIFAHGFARARCGDCGHDYFVAFSCKGRGVCPSCTTRRMVETAAHLNDHVFPRLPVRQWVLSVPKRLRYFMQRDGAVLSMVLRIFLRVIAQTLQTHSPGAAHMDKAGLHIGAIAFIHRFGSSLNEHVHFHVCVVDGVFEEVEGEGDADATPRISSPGVIFHAATGIDAATVAPVQTTLQKRILRAFVARGLLENCDAKDMLGYKHSGFSVDAGVCIEAHDRAALERLLRYCARPPFSMERLRKEGSKLVYRCGKQRSEPTSDKRGAKVDELHLTPLELIDRIAALVPPPRTHRHRYFGVLAPNSPLRAAVTALAQPAASQPATVETAQPGAGVPGVAAPGNAATPTPEPEARPKRAAHYLWAVLIARIYEAFPLLCPMCGGQMRIIAFITHSAEIRHILNHIGVESAPPHITPARGPPLWEGCDAPVDDGAQGEPDWDLAAQPDEVDQRVNW
SIO_010081: RD110_RS27245
subclass of: SO_0000673
so part of: RD110_RS27245
location: 52868..54415
location: region:52868-54415:1
so has part: feature:52868-54415:1:exon

WP_076205821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52868-54415:1:exon

RD110_RS27250
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27250
old locus tag: RD110_27250
so part of: sequence
location: 54581..55249
location: region:54581-55249:1
so has part: feature:54581-55249:1:exon
subclass of: SO_0000010

position:54581:1
position: 54581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55249:1
position: 55249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54581-55249:1:exon

RD110_RS27250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27250
old locus tag: RD110_27250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000904941.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MRLNFLSVKFQAKVATMAVGDPREGKTPLGAVVDAKTVGYPLIAAGVDPAHLYEDQASGKREDRPGLLSCLKALRPGDTLMVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAEFERELITERTIAGLASARARGRKGGRPFKMTAAKLRLAMAAMGQPETKVGDLCQELGITRQTLYRHISPKGELRLDGEKLLSQV
SIO_010081: RD110_RS27250
subclass of: SO_0000673
so part of: RD110_RS27250
location: 54581..55249
location: region:54581-55249:1
so has part: feature:54581-55249:1:exon

WP_237306186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54581-55249:1:exon

RD110_RS27255
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27255
old locus tag: RD110_27255
so part of: sequence
location: complement(55316..55747)
location: region:55316-55747:-1
so has part: feature:55316-55747:-1:exon
subclass of: SO_0000010

position:55316:-1
position: 55316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55747:-1
position: 55747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55316-55747:-1:exon

RD110_RS27255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27255
old locus tag: RD110_27255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005797960.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MVNSAGWFYWALLSAILAALTAIFAKVGIQGVDSDLATLIRTAIIIVVLSAFVAYTGKWTNPLELSPKTWLFLGLSGLATGASWVCYFRALKIGDASKVAPVDKLSLVLVAVFAFAFLGERPSLREWSGISMVAGGVLLLAFK
SIO_010081: RD110_RS27255
subclass of: SO_0000673
so part of: RD110_RS27255
location: complement(55316..55747)
location: region:55316-55747:-1
so has part: feature:55316-55747:-1:exon

WP_005797960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55316-55747:-1:exon

RD110_RS27260
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27260
old locus tag: RD110_27260
so part of: sequence
location: complement(55776..57128)
location: region:55776-57128:-1
so has part: feature:55776-57128:-1:exon
subclass of: SO_0000010

position:55776:-1
position: 55776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57128:-1
position: 57128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55776-57128:-1:exon

RD110_RS27260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27260
old locus tag: RD110_27260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011875627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MDGLKRRLNESVQLKLSFTLSLAILVVAVVAGVFSFLSAFDEAHELQDDVLRQVAQLMDRQRLLPAVPTTDIRLKDVDEESRVIVQRLGEVSPSTVGVDAGGVLPLPATLADGLHTLEVGGETFRVLVKTTASGERIAVAQESGFRNEIARDGALRTVMPFLILVPVLLLIVADLVRKMFQPIAALSKEIDQRAEQELHPVEDRHLPVEVRPFVVAINRLLARVSQSMESQRRFVADAAHELRSPLTAMSLQAERLAEAEMSSVARERLTVLRQGIERGRSLLDQLLTLAKAQSATDLPKSPVSVQSIYRRVLEDLMPLAEAKHIDIGVEGALDAEVWASELDMIAVVKNLVDNAIRYTPEGGRVDLSVGVSEGKVVLRIQDSGPGIPLAERDRVFDPFYRTLGSEQIGSGLGLSIVQTIANRIGAEIRLDFSDQEKQTGLNVAVIAPMR
SIO_010081: RD110_RS27260
subclass of: SO_0000673
so part of: RD110_RS27260
location: complement(55776..57128)
location: region:55776-57128:-1
so has part: feature:55776-57128:-1:exon

WP_029310059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55776-57128:-1:exon

RD110_RS27265
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27265
old locus tag: RD110_27265
so part of: sequence
location: complement(57104..57769)
location: region:57104-57769:-1
so has part: feature:57104-57769:-1:exon
subclass of: SO_0000010

position:57104:-1
position: 57104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57769:-1
position: 57769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57104-57769:-1:exon

RD110_RS27265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27265
old locus tag: RD110_27265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003379522.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MRVLLVEDDPMIGDAIQGALKDASYAADWVKDGQTALTTLGCQHYDLVLLDLGLPGKDGLEVLASIRAKDNPVPLLIITARDGLDDRLRGLDGGADDYVSKPFQMAELLARMRAVLRRKGGTAAPVLSNGVVTLDPATKEACANDGPQVQLSNREFSLLQALLVRPGAILSRSELEDRIYGWGEEVESNAVEYLIHALRRKLGGEVIKNVRGVGWMVSKGA
SIO_010081: RD110_RS27265
subclass of: SO_0000673
so part of: RD110_RS27265
location: complement(57104..57769)
location: region:57104-57769:-1
so has part: feature:57104-57769:-1:exon

WP_005797956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57104-57769:-1:exon

RD110_RS27270
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27270
old locus tag: RD110_27270
so part of: sequence
location: complement(57792..58550)
location: region:57792-58550:-1
so has part: feature:57792-58550:-1:exon
subclass of: SO_0000010

position:57792:-1
position: 57792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58550:-1
position: 58550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57792-58550:-1:exon

RD110_RS27270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27270
old locus tag: RD110_27270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008921974.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein
translation: MKTSTEHALAKVPEVTLGFWLIKIAATTLGETGGDAVSMSMNLGYLVGTAIFAAIFLAAVVAQVKAKDFHPFLYWTTIIATTTVGTTLADFADRSLGIGYAGGSSLLLALLLGSLFVWHRTLGSVSVSTVSSPKAEAFYWLTIMFSQTLGTALGDWTADTAGLGYTGAAVVFGGLLALVVAAYYWTSVSRTLLFWAAFILTRPLGAVVGDFLDKPVSAGGLALSRYSASAALLTFIVVAILLFRQRAARTAH
SIO_010081: RD110_RS27270
subclass of: SO_0000673
so part of: RD110_RS27270
location: complement(57792..58550)
location: region:57792-58550:-1
so has part: feature:57792-58550:-1:exon

WP_011875625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57792-58550:-1:exon

RD110_RS27275
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27275
old locus tag: RD110_27275
so part of: sequence
location: complement(58560..59009)
location: region:58560-59009:-1
so has part: feature:58560-59009:-1:exon
subclass of: SO_0000010

position:58560:-1
position: 58560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59009:-1
position: 59009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58560-59009:-1:exon

RD110_RS27275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27275
old locus tag: RD110_27275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005797953.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFIQHSIARSVAAISAAVLLALAAGCSKSADQNNASSASTTPAQTVSALQVKTASKLGDLSAFRSIATDVAAIVDKGDLPAAKSRIKDLEVAWDSAEAGLKPRAADDWHLLDKAIDKSLATLRADTPSQADCKAAMDALLKTFNTLEGK
SIO_010081: RD110_RS27275
subclass of: SO_0000673
so part of: RD110_RS27275
location: complement(58560..59009)
location: region:58560-59009:-1
so has part: feature:58560-59009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58560-59009:-1:exon

RD110_RS27280
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27280
old locus tag: RD110_27280
so part of: sequence
location: complement(59039..59821)
location: region:59039-59821:-1
so has part: feature:59039-59821:-1:exon
subclass of: SO_0000010

position:59039:-1
position: 59039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59821:-1
position: 59821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59039-59821:-1:exon

RD110_RS27280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27280
old locus tag: RD110_27280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020200937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein
translation: MNKLPTSSTTGWLNKVPEVALSFWIIKIMSTTVGETGADFLAVNAGWGQGVTRTVMAALLAAALFMQLRTRRYTPWIYWLTVVLVSVVGTQITDLLTDGLGVSLYISTSAFAVALAAIFFVWYRIERTLSIHDIVTRSRELFYWAAILCTFALGTAAGDLATEALGLGFTWGAVAFGVLIGITYTAWRMGGNAVLTFWIAYILTRPFGAALGDLLTQAKTYGGLGMGAMWTSALFLTVIVMLVAVAQIGMNGRRSAQLVE
SIO_010081: RD110_RS27280
subclass of: SO_0000673
so part of: RD110_RS27280
location: complement(59039..59821)
location: region:59039-59821:-1
so has part: feature:59039-59821:-1:exon

WP_005797951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59039-59821:-1:exon

RD110_RS27285
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27285
old locus tag: RD110_27285
so part of: sequence
location: complement(59892..60488)
location: region:59892-60488:-1
so has part: feature:59892-60488:-1:exon
subclass of: SO_0000010

position:59892:-1
position: 59892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60488:-1
position: 60488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59892-60488:-1:exon

RD110_RS27285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27285
old locus tag: RD110_27285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011517526.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyl-diphosphatase
translation: MESLNHTFFLWLNAPEHPSALALTLATFFAEQLIWAVPLLIGIGWLRGGEPTRKTMLVASASGLLGLLINQIIGLAWLHPRPFMIGLGHTLIPHVADSSFPSDHLTLWWAVAFSLALQRGPRIAGVTLALLGVPIAWARIYLGVHFPFDMLGAIAVAAICAWLTLREAHWYLLPSYQLSTGIHRRLFSGLIALGWVRE
SIO_010081: RD110_RS27285
subclass of: SO_0000673
so part of: RD110_RS27285
location: complement(59892..60488)
location: region:59892-60488:-1
so has part: feature:59892-60488:-1:exon

WP_011517526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59892-60488:-1:exon

RD110_RS27290
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27290
old locus tag: RD110_27290
so part of: sequence
location: complement(60545..60880)
location: region:60545-60880:-1
so has part: feature:60545-60880:-1:exon
subclass of: SO_0000010

position:60545:-1
position: 60545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60880:-1
position: 60880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60545-60880:-1:exon

RD110_RS27290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27290
old locus tag: RD110_27290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011517525.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PepSY domain-containing protein
translation: MYRYTKLSLLAVAIAATGAVAYAANGGMENDALAISKAKIPLTQAVTVAEQHANGKASRAEYENSKQGWVYDVEVVSGAKVFDVRVDADKGTVISSAEDKADHDDDHDKRD
SIO_010081: RD110_RS27290
subclass of: SO_0000673
so part of: RD110_RS27290
location: complement(60545..60880)
location: region:60545-60880:-1
so has part: feature:60545-60880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60545-60880:-1:exon

RD110_RS27300
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27300
old locus tag: RD110_27300
so part of: sequence
location: complement(61425..62617)
location: region:61425-62617:-1
so has part: feature:61425-62617:-1:exon
subclass of: SO_0000010

position:61425:-1
position: 61425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62617:-1
position: 62617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61425-62617:-1:exon

RD110_RS27300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27300
old locus tag: RD110_27300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612070.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MSDKQVRAQYTREYKLEAVRQVKGGQSIAATAKVLGIPKASLSNWVRRGAKGDVGGVGDRPASVTPEQMELARLRAEVARLRMERDIGKKSRGVLRAGHAARYAWIYQMRNQYPVSISCEVLEVSASGYFVWQRRRDAARPGPAGRHSDEALLAHMRAIHIEVKQEYGWPRMHKELLARGIRVGKERVRHLMQQHGIKAKTKRKFVVTTDSRHSLPVAPDLVQRRFNPEAPNRLWSGDITYIATDEGWLYLAGVIDLFSRQVVGWSMQAHMQASLVKDALTMAWFRRRPEAGLIFHSDRGSQYCSHEFQDTLRVWEMRSSMSRKGNCWDNAPTESFWGRLKTASLYGRKFATRREAMDAVLDWMAFYNHRRLHSTLGYLSPMQYEQRWYEAQRKKAA
SIO_010081: RD110_RS27300
subclass of: SO_0000673
so part of: RD110_RS27300
location: complement(join(61425..62356,62356..62617))
location: region:61425-62617:-1
so has part: feature:62356-62617:-1:exon
so has part: feature:61425-62356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62356-62617:-1:exon

position:62356:-1
position: 62356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61425-62356:-1:exon

RD110_RS27315
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27315
old locus tag: RD110_27315
so part of: sequence
location: complement(62880..63443)
location: region:62880-63443:-1
so has part: feature:62880-63443:-1:exon
subclass of: SO_0000010

position:62880:-1
position: 62880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63443:-1
position: 63443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62880-63443:-1:exon

RD110_RS27315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27315
old locus tag: RD110_27315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MALIGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLAAALAYLRDGDVLAVWRLDRLGRSMPHLIETIGALEARGVGFRSLTESIDTTTPGGRLIFHVFGALGQFERDLIRERTKAGLTAAAARGRKGGRKPVVTADKLQRAQEHIANGLNVREAATRLKVSKTALYAALQGGSEQP
SIO_010081: RD110_RS27315
subclass of: SO_0000673
so part of: RD110_RS27315
location: complement(62880..63443)
location: region:62880-63443:-1
so has part: feature:62880-63443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62880-63443:-1:exon

RD110_RS27320
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27320
old locus tag: RD110_27320
so part of: sequence
location: complement(63679..63999)
location: region:63679-63999:-1
so has part: feature:63679-63999:-1:exon
subclass of: SO_0000010

position:63679:-1
position: 63679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63999:-1
position: 63999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63679-63999:-1:exon

RD110_RS27320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27320
old locus tag: RD110_27320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007974210.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MQRGDLVTVSLQGDYGKPRPALIVQSDLLTDLESVVLCPVTSDLRNAAFRVTVEPNPANGLRALSQVMVDKLSTLPRTKISEPFGRLDDERMKAIDRALLLVVGVI
SIO_010081: RD110_RS27320
subclass of: SO_0000673
so part of: RD110_RS27320
location: complement(63679..63999)
location: region:63679-63999:-1
so has part: feature:63679-63999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63679-63999:-1:exon

RD110_RS27325
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27325
old locus tag: RD110_27325
so part of: sequence
location: complement(63999..64214)
location: region:63999-64214:-1
so has part: feature:63999-64214:-1:exon
subclass of: SO_0000010

position:64214:-1
position: 64214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63999-64214:-1:exon

RD110_RS27325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27325
old locus tag: RD110_27325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345582.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin MazE family protein
translation: MPSIHESKVARHRERMRAAGLRPVQFWVPDTRSPEFTAQVRKQCQSLKGDPAEAEVLRFTEEAASHVEGWE
SIO_010081: RD110_RS27325
subclass of: SO_0000673
so part of: RD110_RS27325
location: complement(63999..64214)
location: region:63999-64214:-1
so has part: feature:63999-64214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63999-64214:-1:exon

RD110_RS27330
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27330
old locus tag: RD110_27330
so part of: sequence
location: 64503..65258
location: region:64503-65258:1
so has part: feature:64503-65258:1:exon
subclass of: SO_0000010

position:64503:1
position: 64503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65258:1
position: 65258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64503-65258:1:exon

RD110_RS27330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27330
old locus tag: RD110_27330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173692.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MPRQSRAARQALAKTPPLRVGGDGLVEGADRIMRTPTEHQAAGVAFKVARIYLRVSTDEQDLTRQAAIVESTRAAGFYVAGIYREKASGARADRAELLRMIGDLQPGEVVVAEKIDRISRLPLPEAERLVASIRAQGARLAVPGVVDLSDLAAEAKGVAKVVLESIQDMLLKLALQMARDDYEDRRERQRQGVELAKDAGRYTGRKANTKVHERIVALRSAGHSIPETARLAGCSESQVKRVWALHNQAQA
SIO_010081: RD110_RS27330
subclass of: SO_0000673
so part of: RD110_RS27330
location: 64503..65258
location: region:64503-65258:1
so has part: feature:64503-65258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64503-65258:1:exon

RD110_RS27335
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27335
old locus tag: RD110_27335
so part of: sequence
location: complement(65260..65934)
location: region:65260-65934:-1
so has part: feature:65260-65934:-1:exon
subclass of: SO_0000010

position:65260:-1
position: 65260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65934:-1
position: 65934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65260-65934:-1:exon

RD110_RS27335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27335
old locus tag: RD110_27335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011178411.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methylase
translation: MRYPGGKGGAGVYQTIINNIPPHDTYIETHLGGGNILERKRPAARSVGIDVDPEVIEVWQQLDVPGLELHHGDAVAWLESHQFTGSEFVYADPPYVMDSRRGGKLYRHEYDDADHVRLLDVLAGLPCAVMVSGYSSTIYDSSPLASWRTIDFNAMTRGGIAIERLWMNYPEPAELHDLRYLGSNFRERERIKRKKARWQAKLAKLDPLERAAIMECLRELEAAE
SIO_010081: RD110_RS27335
subclass of: SO_0000673
so part of: RD110_RS27335
location: complement(65260..65934)
location: region:65260-65934:-1
so has part: feature:65260-65934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65260-65934:-1:exon

RD110_RS27340
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27340
old locus tag: RD110_27340
so part of: sequence
location: complement(66089..66520)
location: region:66089-66520:-1
so has part: feature:66089-66520:-1:exon
subclass of: SO_0000010

position:66089:-1
position: 66089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66520:-1
position: 66520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66089-66520:-1:exon

RD110_RS27340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27340
old locus tag: RD110_27340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001665065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MRKPVLLALSLAFLVSAQSALAAGDAGNFGTPIKSGVSVSFPDSSATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADEALALRRALSARSYLVARGVSPLKIMVNFASAADFVADNSTAEGRRENQRVDIEVVYIPTY
SIO_010081: RD110_RS27340
subclass of: SO_0000673
so part of: RD110_RS27340
location: complement(66089..66520)
location: region:66089-66520:-1
so has part: feature:66089-66520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66089-66520:-1:exon

RD110_RS27345
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27345
old locus tag: RD110_27345
so part of: sequence
location: complement(66536..67234)
location: region:66536-67234:-1
so has part: feature:66536-67234:-1:exon
subclass of: SO_0000010

position:66536:-1
position: 66536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67234:-1
position: 67234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66536-67234:-1:exon

RD110_RS27345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27345
old locus tag: RD110_27345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraX family protein
translation: MKALRIPDGTVEALKWLALVLMTGDHVNKYLFNATLPVLFEAGRVALPLFVFVLAYNLARPGTLERGVYGRTMSRLAMFGALASVPFVALGGLYAGWWPLNVMFTLLVVTATAYLVERGGKLHLAAAGVVFLVGGSSVEYWWPAVAFGLAVWSYTRRPSWAAAAVAVLACAALWFVNRNLWALAALPVLFLASRVDVRVPRLRWAFYAYYPLHLASLWLIRIPMSKAGYLFF
SIO_010081: RD110_RS27345
subclass of: SO_0000673
so part of: RD110_RS27345
location: complement(66536..67234)
location: region:66536-67234:-1
so has part: feature:66536-67234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66536-67234:-1:exon

RD110_RS27350
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27350
old locus tag: RD110_27350
so part of: sequence
location: complement(67234..67500)
location: region:67234-67500:-1
so has part: feature:67234-67500:-1:exon
subclass of: SO_0000010

position:67500:-1
position: 67500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67234-67500:-1:exon

RD110_RS27350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27350
old locus tag: RD110_27350
function: unknown
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798697.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKFHAFMMRYTLGVGRLLQAYCKWAEGQAKNQLDLLLLGLGPIFALGLLLWALPAWIGKPIAFVLSLPALYIIFLVLRAYAIRGGRR
SIO_010081: RD110_RS27350
subclass of: SO_0000673
so part of: RD110_RS27350
location: complement(67234..67500)
location: region:67234-67500:-1
so has part: feature:67234-67500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67234-67500:-1:exon

RD110_RS27355
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27355
old locus tag: RD110_27355
so part of: sequence
location: complement(67529..68164)
location: region:67529-68164:-1
so has part: feature:67529-68164:-1:exon
subclass of: SO_0000010

position:67529:-1
position: 67529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68164:-1
position: 68164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67529-68164:-1:exon

RD110_RS27355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27355
old locus tag: RD110_27355
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798698.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase SLT domain-containing protein
translation: MPFFADLPPQLQERVVCSISAAVKYEVPVNIVLAVAEKEGGKPGQWVRNSNGTHDVGPMQFNTAYLGDLARYGITANDVAAAGCYSFDLAAWRLRMHIRNDKGDLWTKAANYHSRTPQYNAVYRADLMRKASKWADWLEARFVTLDVTKAGATPSTPSQPATVAQRATPAARPAPAPQQAAPAAAAARSVSVAGYVPRTVSFNTSREGSAE
SIO_010081: RD110_RS27355
subclass of: SO_0000673
so part of: RD110_RS27355
location: complement(67529..68164)
location: region:67529-68164:-1
so has part: feature:67529-68164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67529-68164:-1:exon

RD110_RS27360
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
locus tag: RD110_RS27360
old locus tag: RD110_27360
so part of: sequence
location: complement(68178..68765)
location: region:68178-68765:-1
so has part: feature:68178-68765:-1:exon
subclass of: SO_0000010

position:68178:-1
position: 68178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68765:-1
position: 68765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68178-68765:-1:exon

RD110_RS27360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
locus tag: RD110_RS27360
old locus tag: RD110_27360
function: probable role in the formation of the mating lock (cell-cell contact between donor and recipient) during conjugation on the basis that TrbM shows homology to Haemophilus influenzae adhesin and has an export signal sequence
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MKKKLFALAALVAALGSTAGTASAQDVLTGDTRLACEAILCLSSGTRPSECTPSLSRYFNITKRKLSDTIRARLNFLQLCPVASQTPEMQSLVSAISRGAGRCDAQSLNSTLVMWTGGYDDGRTYISNQLPDYCGAYTGHAYTDFASSGTLPRYVGTPERGGYWVEARDYDRALAEYNERIRREDEERRRQSWLN
SIO_010081: RD110_RS27360
subclass of: SO_0000673
so part of: RD110_RS27360
location: complement(68178..68765)
location: region:68178-68765:-1
so has part: feature:68178-68765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68178-68765:-1:exon

RD110_RS27365
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: trbL
locus tag: RD110_RS27365
old locus tag: RD110_27365
pseudo: true
so part of: sequence
location: complement(68783..70503)
location: region:68783-70503:-1
so has part: feature:68783-70503:-1:exon
subclass of: SO_0000010

position:68783:-1
position: 68783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70503:-1
position: 70503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68783-70503:-1:exon

RD110_RS27365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: trbL
locus tag: RD110_RS27365
old locus tag: RD110_27365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114051.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
SIO_010081: RD110_RS27365
subclass of: SO_0000673
so part of: RD110_RS27365
location: complement(68783..70503)
location: region:68783-70503:-1
so has part: feature:68783-70503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68783-70503:-1:exon

RD110_RS27370
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: trbK
locus tag: RD110_RS27370
old locus tag: RD110_27370
so part of: sequence
location: complement(70514..70741)
location: region:70514-70741:-1
so has part: feature:70514-70741:-1:exon
subclass of: SO_0000010

position:70514:-1
position: 70514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70741:-1
position: 70741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70514-70741:-1:exon

RD110_RS27370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: trbK
locus tag: RD110_RS27370
old locus tag: RD110_27370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000644148.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0009292 - horizontal gene transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: entry exclusion lipoprotein TrbK
translation: MKAIKALSLASAALVAALVAGCDNKPATAPMPEMNDENCKPENIAKIEDKGVQQAFSSLCLRRGGDFKPSPKREW
SIO_010081: RD110_RS27370
subclass of: SO_0000673
so part of: RD110_RS27370
location: complement(70514..70741)
location: region:70514-70741:-1
so has part: feature:70514-70741:-1:exon

WP_076205824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70514-70741:-1:exon

RD110_RS27375
type: Gene
subclass of: SO_0000704
RO_0002162: 1842727
gene: trbJ
locus tag: RD110_RS27375
old locus tag: RD110_27375
so part of: sequence
location: complement(70751..>71276)
location: region:70751-71276:-1
so has part: feature:70751-71276:-1:exon
subclass of: SO_0000010

position:70751:-1
position: 70751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71276:-1
position: 71276
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70751-71276:-1:exon

RD110_RS27375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1842727
gene: trbJ
locus tag: RD110_RS27375
old locus tag: RD110_27375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000802794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 2
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: DQAQSTINGLMNAVNTLDYYKTQLGSLDSYIGKFQDVNYYKNSPCFTAAGCSDAERAALRNVAQLASESQKKANDAFVQGLDRQQTNLTADAATLQRLQSAAQGAQGQMQAIGYANQLASQQANQLLQIRGLLIAQQNAMATKMQADADKEAQQAAAAAQLRQGSYRASPARTW
SIO_010081: RD110_RS27375
subclass of: SO_0000673
so part of: RD110_RS27375
location: complement(70751..>71276)
location: region:70751-71276:-1
so has part: feature:70751-71276:-1:exon

WP_076205826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70751-71276:-1:exon