Secondary endosymbiont of Trabutina mannipara isolate TRABTM chromosome I, complete sequence.
type: Entry
definition: Secondary endosymbiont of Trabutina mannipara isolate TRABTM chromosome I, complete sequence.
sequence version: NZ_LT594522.1
sequence date: 2022-12-24
sequence: sequence
division: CON
label: NZ_LT594522.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA3935976
keyword: RefSeq
source: secondary endosymbiont of Trabutina mannipara
organism: secondary endosymbiont of Trabutina mannipara
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLT594522.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 03:30:16\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 309\nCDSs (total) :: 263\nGenes (coding) :: 234\nCDSs (with protein) :: 234\nGenes (RNA) :: 46\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 41\nncRNAs :: 2\nPseudo Genes (total) :: 29\nCDSs (without protein) :: 29\nPseudo Genes (ambiguous residues) :: 0 of 29\nPseudo Genes (frameshifted) :: 14 of 29\nPseudo Genes (incomplete) :: 18 of 29\nPseudo Genes (internal stop) :: 8 of 29\nPseudo Genes (multiple problems) :: 9 of 29\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 298471
topology: circular
so has quality: SO_0000988
location: 1..298471
location: region:1-298471:1
RO_0002162: 1835721

NZ_LT594522
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA3935976
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Szabo, Gitta.
journal: Submitted (16-JUN-2016) Division of Microbial Ecology Department of Microbiology and Ecosystem Science University of Vienna, Althanstrasse 14, A-1090 Wien, Austria, Austria

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298471:1
position: 298471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-298471:1:source
so part of: sequence
organism: secondary endosymbiont of Trabutina mannipara
mol type: genomic DNA
isolate: TRABTM
chromosome: I

1835721
type: Taxonomy
SIO_000068: taxonomy

TREMTM_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tusC
locus tag: TREMTM_RS00005
old locus tag: TRABTM_A_00010
so part of: sequence
location: complement(160..525)
location: region:160-525:-1
so has part: feature:160-525:-1:exon
subclass of: SO_0000010

position:160:-1
position: 160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525:-1
position: 525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160-525:-1:exon

TREMTM_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tusC
locus tag: TREMTM_RS00005
old locus tag: TRABTM_A_00010
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004951206.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusC
translation: MKSIAFIFTNGPYGNTSSSEGLDLLLAISSLSKSNKIGVFFISDGVLLLLSKQQPAKILAKNFTVKFSILSIYDINQIYMCADSAMERGLNSNIEYILDFEFLSAKYLRHYLSKYNVILTF
SIO_010081: TREMTM_RS00005
subclass of: SO_0000673
so part of: TREMTM_RS00005
location: complement(160..525)
location: region:160-525:-1
so has part: feature:160-525:-1:exon

WP_083172216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160-525:-1:exon

TREMTM_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tusD
locus tag: TREMTM_RS00010
old locus tag: TRABTM_A_00020
so part of: sequence
location: complement(604..1002)
location: region:604-1002:-1
so has part: feature:604-1002:-1:exon
subclass of: SO_0000010

position:604:-1
position: 604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002:-1
position: 1002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604-1002:-1:exon

TREMTM_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tusD
locus tag: TREMTM_RS00010
old locus tag: TRABTM_A_00020
EC number: 2.8.1.-
inference: COORDINATES: protein motif:HMM:NF001237.0
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusD
translation: MNLNYCIMITATAYEKQNSIIALQFTKTLLESNNHISTIFFYQNGVNNANSLITSAIDEIDLILAWCELAKKYKIRLDICVSAAIRRGLVKTEQTIMLNKKNKIGNFQNYFNLVSLSYFAQALFFCDRFIQF
SIO_010081: TREMTM_RS00010
subclass of: SO_0000673
so part of: TREMTM_RS00010
location: complement(604..1002)
location: region:604-1002:-1
so has part: feature:604-1002:-1:exon

WP_269446329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:604-1002:-1:exon

TREMTM_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tusA
locus tag: TREMTM_RS00015
old locus tag: TRABTM_A_00030
so part of: sequence
location: 1229..1471
location: region:1229-1471:1
so has part: feature:1229-1471:1:exon
subclass of: SO_0000010

position:1229:1
position: 1229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471:1
position: 1471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229-1471:1:exon

TREMTM_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tusA
locus tag: TREMTM_RS00015
old locus tag: TRABTM_A_00030
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009638765.1
GO function: GO:0097163 - sulfur carrier activity [Evidence IEA]
GO process: GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA
translation: MFDTDQILDVCGLFCPEPLIMVRKIVRNMKDGQTLLIITDDLATVRYIPYFCHFMKHTLLEKKVDYLPYHFFLKKGINKS
SIO_010081: TREMTM_RS00015
subclass of: SO_0000673
so part of: TREMTM_RS00015
location: 1229..1471
location: region:1229-1471:1
so has part: feature:1229-1471:1:exon

WP_083172218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1229-1471:1:exon

TREMTM_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplU
locus tag: TREMTM_RS00020
old locus tag: TRABTM_A_00040
so part of: sequence
location: 1556..1870
location: region:1556-1870:1
so has part: feature:1556-1870:1:exon
subclass of: SO_0000010

position:1556:1
position: 1556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870:1
position: 1870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1556-1870:1:exon

TREMTM_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplU
locus tag: TREMTM_RS00020
old locus tag: TRABTM_A_00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013024339.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L21
translation: MYAVFQAGGKQHRVVKNQIIRIEKLNILVDKIIEFNQIIMIVNHPKIQIGNPFLIKSKIIAKIIAHGRYNKIMIIKFNRRKHYRKHIGHHQLFTDIKISDIVEN
SIO_010081: TREMTM_RS00020
subclass of: SO_0000673
so part of: TREMTM_RS00020
location: 1556..1870
location: region:1556-1870:1
so has part: feature:1556-1870:1:exon

WP_083172220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1556-1870:1:exon

TREMTM_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpmA
locus tag: TREMTM_RS00025
old locus tag: TRABTM_A_00050
so part of: sequence
location: 1874..2131
location: region:1874-2131:1
so has part: feature:1874-2131:1:exon
subclass of: SO_0000010

position:1874:1
position: 1874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2131:1
position: 2131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1874-2131:1:exon

TREMTM_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpmA
locus tag: TREMTM_RS00025
old locus tag: TRABTM_A_00050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888639.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L27
translation: MAHKKAGGSTRNGRDSKSKRLGVKHFDGEIINAGSIIIRQRGTHFHPGKNVGYGKDYTLFALISGTVKFNKKGPKGRKFISIIAN
SIO_010081: TREMTM_RS00025
subclass of: SO_0000673
so part of: TREMTM_RS00025
location: 1874..2131
location: region:1874-2131:1
so has part: feature:1874-2131:1:exon

WP_083172222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1874-2131:1:exon

TREMTM_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: cgtA
locus tag: TREMTM_RS00030
old locus tag: TRABTM_A_00060
pseudo: true
so part of: sequence
location: 2168..>3145
location: region:2168-3145:1
so has part: feature:2168-3145:1:exon
subclass of: SO_0000010

position:2168:1
position: 2168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145:1
position: 3145
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2168-3145:1:exon

TREMTM_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: cgtA
locus tag: TREMTM_RS00030
old locus tag: TRABTM_A_00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011092306.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Obg family GTPase CgtA
SIO_010081: TREMTM_RS00030
subclass of: SO_0000673
so part of: TREMTM_RS00030
location: 2168..>3145
location: region:2168-3145:1
so has part: feature:2168-3145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2168-3145:1:exon

TREMTM_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
alternative label: gicA
alternative label: msmC
gene: cspE
locus tag: TREMTM_RS00035
old locus tag: TRABTM_A_00070
gene synonym: gicA; msmC
so part of: sequence
location: complement(3335..3544)
location: region:3335-3544:-1
so has part: feature:3335-3544:-1:exon
subclass of: SO_0000010

position:3335:-1
position: 3335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3544:-1
position: 3544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3335-3544:-1:exon

TREMTM_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
alternative label: gicA
alternative label: msmC
gene: cspE
locus tag: TREMTM_RS00035
old locus tag: TRABTM_A_00070
gene synonym: gicA; msmC
inference: COORDINATES: similar to AA sequence:RefSeq:NP_310560.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription antiterminator/RNA stability regulator CspE
translation: MAKIKGQVKWFNESKGFGFITPNDGSKDVFVHFSAIQSNGFKTLVEGQNVEFEIQDGQKGPSAINVTTI
SIO_010081: TREMTM_RS00035
subclass of: SO_0000673
so part of: TREMTM_RS00035
location: complement(3335..3544)
location: region:3335-3544:-1
so has part: feature:3335-3544:-1:exon

WP_083172224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3335-3544:-1:exon

TREMTM_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01520
so part of: sequence
location: 4156..4299
location: region:4156-4299:1
so has part: feature:4156-4299:1:exon
subclass of: SO_0000010

position:4156:1
position: 4156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4299:1
position: 4299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4156-4299:1:exon

TREMTM_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLINRESFIITHDISSYSFVVMAKASRSMLKSSLITFDFYTFDFYRS
SIO_010081: TREMTM_RS01520
subclass of: SO_0000673
so part of: TREMTM_RS01520
location: 4156..4299
location: region:4156-4299:1
so has part: feature:4156-4299:1:exon

WP_156763236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4156-4299:1:exon

TREMTM_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: topA
locus tag: TREMTM_RS00040
old locus tag: TRABTM_A_00090
so part of: sequence
location: complement(4909..6906)
location: region:4909-6906:-1
so has part: feature:4909-6906:-1:exon
subclass of: SO_0000010

position:4909:-1
position: 4909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6906:-1
position: 6906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4909-6906:-1:exon

TREMTM_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: topA
locus tag: TREMTM_RS00040
old locus tag: TRABTM_A_00090
EC number: 5.6.2.1
inference: COORDINATES: protein motif:HMM:TIGR01051.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I DNA topoisomerase
translation: MLPGKEKIIIELKKIAKEVNHIYLATDLDREGEAIAWHLRKVIGGNNTNFSRVVFNEITHNAIIKAFKFTKKLNINYVNAQQTRRFMDRIIGYMISPLLCKKISRGLSAGRVQSVAVKLVVERERKIKSFVSEEYYKLYAYLKNSKNLPLTLQVTHKKEKIFKPKNKNKIKLAIDILKKIDFFVINSFEKITFSKPSAPFTTATLQQAANVRLNYNIKKTMLLAQQLYEAGYITYMRTDSTHLSQDAINMAREYILKVFGKSYLSKKERKYTNKNNLQEAHEAIRPSYINIISEKKIKNLKLDAQNLYNLIFNQFIACQMMSAKYNFINITVKADNFKLHTSGRTLLFDGWIKIMPLLGQHYNDKILPILKIGEKLKLIKLIPNQCFTKPPVRYCEASLVKELEKKGIGRPSTYVSIITTIKNRGYVHTIDNRFYAKKIGEIVTDRLEESFNELISYDFTAKMENNLDLIAINQQYWKNVLNIFFKKFLQKLEIAKKDPKDGGMQLNKSVITDIDCSICKKKMMICTTSTGVFLGCSSYTMNIKEKCKNTINLIPKLEILNIIKNFNLKKDILLPQQYCHNCNTIMDCYIIYGQHNIFYICGKNPLCNGYKIKKSNLNHIITTKCKKCSYNMYLKQGCFGNYMLCINDTCKNTIKILSKSDIATL
SIO_010081: TREMTM_RS00040
subclass of: SO_0000673
so part of: TREMTM_RS00040
location: complement(4909..6906)
location: region:4909-6906:-1
so has part: feature:4909-6906:-1:exon

WP_231893361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4909-6906:-1:exon

TREMTM_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01525
so part of: sequence
location: complement(6975..7124)
location: region:6975-7124:-1
so has part: feature:6975-7124:-1:exon
subclass of: SO_0000010

position:6975:-1
position: 6975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7124:-1
position: 7124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6975-7124:-1:exon

TREMTM_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01525
inference: COORDINATES: protein motif:HMM:NF013878.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toprim domain-containing protein
translation: MNKFLVIVESPAKAKTINKYLGEEYIVKSSFGHIRDLSQKNLNYKKKQN
SIO_010081: TREMTM_RS01525
subclass of: SO_0000673
so part of: TREMTM_RS01525
location: complement(6975..7124)
location: region:6975-7124:-1
so has part: feature:6975-7124:-1:exon

WP_156763238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6975-7124:-1:exon

TREMTM_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00045
old locus tag: TRABTM_A_00120
so part of: sequence
location: 7577..9154
location: region:7577-9154:1
so has part: feature:7577-9154:1:exon
subclass of: SO_0000010

position:7577:1
position: 7577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9154:1
position: 9154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7577-9154:1:exon

TREMTM_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00045
old locus tag: TRABTM_A_00120
EC number: 4.1.3.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012105107.1
GO function: GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anthranilate synthase component 1
translation: MLNNNIEVLYARANYNTNSIAIFNKLCGNRPATLLLESAEIDKKNDIESIIIIDSALRITSLGQTVIIKAISRNGYALLLQLKNILPKTIKIINYQFSMKLLFPLIDKNLDEDARLRSLSVFDCLRSLLKLVNQPPNMPKAMFFGGLFSYDLISVFENIPILQQKQHCPDYCFYLAETLLTINHQQKNCELQCSLFRSSLTEKNRLQHRLKELQYQINQSPELIQHQIIDNMKLTYNHSNEEYRKIIRCMQQKIIKGEIFQVVPSRRFFLPCPSTLAAYSTLKNINPSPYMFYMQDNEFTLFGASPERSLKYDPNTRQIEICPIAGTRIRGRHIDGTLDVDLDSRIELNMRSDHKELAEHLMLVDLARNDLARICDPGTRYVADLIKVDRYSFVMHLVSRVIGKLRSDLDMLHAYLACMNMGTLSGTPKIRAMQIIAEVEGERRGSYGGAIGYFTATGILDTCIVIRSAYVENNIATVQSGAGIVLDSIPQNEVDESINKARAVLHAIATAHEAKDILNGRYFTT
SIO_010081: TREMTM_RS00045
subclass of: SO_0000673
so part of: TREMTM_RS00045
location: 7577..9154
location: region:7577-9154:1
so has part: feature:7577-9154:1:exon

WP_083172226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7577-9154:1:exon

TREMTM_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00050
old locus tag: TRABTM_A_00130
pseudo: true
so part of: sequence
location: 9132..>9701
location: region:9132-9701:1
so has part: feature:9132-9701:1:exon
subclass of: SO_0000010

position:9132:1
position: 9132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9701:1
position: 9701
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9132-9701:1:exon

TREMTM_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00050
old locus tag: TRABTM_A_00130
inference: COORDINATES: similar to AA sequence:RefSeq:NP_309862.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26.; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
SIO_010081: TREMTM_RS00050
subclass of: SO_0000673
so part of: TREMTM_RS00050
location: 9132..>9701
location: region:9132-9701:1
so has part: feature:9132-9701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9132-9701:1:exon

TREMTM_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: trpCF
locus tag: TREMTM_RS00055
old locus tag: TRABTM_A_00140
so part of: sequence
location: 9805..11169
location: region:9805-11169:1
so has part: feature:9805-11169:1:exon
subclass of: SO_0000010

position:9805:1
position: 9805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11169:1
position: 11169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9805-11169:1:exon

TREMTM_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: trpCF
locus tag: TREMTM_RS00055
old locus tag: TRABTM_A_00140
EC number: 4.1.1.48
EC number: 5.3.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012667978.1
GO function: GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]; GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
GO process: GO:0006568 - tryptophan metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
translation: MKDTILTKIIKDKYEWITKLKKLYPLKSFNHKVNPSTRSFYHAISDNNKIEFILECKKASPSKGIICSDFDPINIASIYRHYASVISVLTEEKYFKGNLNFLRQVSQSINQPILCKDFIIDPWQIYLARLYQADAILLMLSILNDDNYCKLVTVAHHLNMGILTEVINNKERNRAISLKAKVIGINNRDLRYLSINLNRINVLSPKLPADINIISESGITICNKVRKISNYTNGFLIGSTLMAETNLITSLFKILLGANKVCGLTRTIDARASIESGAIYGGLIFIPGTPRVINENIAQNIISSAALHYVGVFSNNSIKKIVNITTKLAISILQLHGNENQNYIDILNQYLVSDGYLWKVFDIFNIILPINNLSKIDRYVLDNGGGSGKSFNWLLLNEIKLDNIMLAGGLTTANCIAATRLGCAGIDFNSKLEIEPGIKDHKKISTVFDTLRSY
SIO_010081: TREMTM_RS00055
subclass of: SO_0000673
so part of: TREMTM_RS00055
location: 9805..11169
location: region:9805-11169:1
so has part: feature:9805-11169:1:exon

WP_083172229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9805-11169:1:exon

TREMTM_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: trpB
locus tag: TREMTM_RS00060
old locus tag: TRABTM_A_00150
so part of: sequence
location: 11217..12407
location: region:11217-12407:1
so has part: feature:11217-12407:1:exon
subclass of: SO_0000010

position:11217:1
position: 11217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12407:1
position: 12407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11217-12407:1:exon

TREMTM_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: trpB
locus tag: TREMTM_RS00060
old locus tag: TRABTM_A_00150
EC number: 4.2.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019083174.1
GO function: GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan synthase subunit beta
translation: MTLINPYFGEFGGMYVPQILVPALLQLEEEFVNAQNDPKFNIEFKNMLTKYAGRPTPITECHNLTIGTNAKLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASALSSALLRLKCRIYMGAKDIERQSPNVFRMKLMGAEVIPVHSGSSTLKDACNEALRDWSGNYEKAHYMLGTAAGPHPFPTIVREFQKMIGEETRAQMYEQEHCLPNAIIACVGGGSNAIGIFNEFINEPKVRLIGVESGGLGIETGKHGASLKYGRTGIYFGMKSPMLQSSEGQIKESYSISAGLDFPSVGPQHAYLNSIGRAEYVSITDKEALDAFKILSRYEGIIPALESSHALAYALKMIRSEPDKKQILVVNLSGRGDKDIFTVHKILSSKGEI
SIO_010081: TREMTM_RS00060
subclass of: SO_0000673
so part of: TREMTM_RS00060
location: 11217..12407
location: region:11217-12407:1
so has part: feature:11217-12407:1:exon

WP_083172231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11217-12407:1:exon

TREMTM_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: trpA
locus tag: TREMTM_RS00065
old locus tag: TRABTM_A_00160
so part of: sequence
location: 12407..13228
location: region:12407-13228:1
so has part: feature:12407-13228:1:exon
subclass of: SO_0000010

position:13228:1
position: 13228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12407-13228:1:exon

TREMTM_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: trpA
locus tag: TREMTM_RS00065
old locus tag: TRABTM_A_00160
EC number: 4.2.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015834187.1
GO function: GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan synthase subunit alpha
translation: MERYKKLFSKLINSNEGAFVPFVILGDPNPIISLQIIDTIINAGADALELGIPFSDPLADGPTIQKANLRAFNSGVTFDSCFEMLTTIRKKYISIPIGLLIYANLVYNKGLDFFYYLCNKVGIDSVLVADVPLLESLSFRNSARRYNISPIFICPPNADLLLLQEITLYSKAYIYLLSRPGVTGIENKGNILLTNLVNKLKKYNAAPILQGFGISEPEQVRIALHNGISGVISGSAIISIIEYNLNNTSLIFKKIFKFIFEMKAATYLKKLSL
SIO_010081: TREMTM_RS00065
subclass of: SO_0000673
so part of: TREMTM_RS00065
location: 12407..13228
location: region:12407-13228:1
so has part: feature:12407-13228:1:exon

WP_083172232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12407-13228:1:exon

TREMTM_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: cls
locus tag: TREMTM_RS00070
old locus tag: TRABTM_A_00170
so part of: sequence
location: 13387..14844
location: region:13387-14844:1
so has part: feature:13387-14844:1:exon
subclass of: SO_0000010

position:13387:1
position: 13387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14844:1
position: 14844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13387-14844:1:exon

TREMTM_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: cls
locus tag: TREMTM_RS00070
old locus tag: TRABTM_A_00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1
GO function: GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO process: GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cardiolipin synthase
translation: MMLFCTISNWLSILFYWLLITSVTLRVIMKRRAVPAAMSWLLVIYILPLLGIMIYLLFGESNLDKYRKKRSKDIWQSTTKLIKNLKEYQRIFSNENSELASSLFKLCENRQGFKGLKGNKIKLLTNTDNALKMLINDVNKAQKNIEIVFYIWQIGGLVDKVAEALMAAARRGVHCRLILDSAGSMNFFRSSYHSKMRAAGINIVEALHVSILCIFIRRMDLRQHRKMVLIDNYIAYTGSMNMVDPRFFKKNIGIGQWIDILLRIEGPIAVVMGIIFSYDWEIETGERILPQPKINIIPFSKKSENIIQIIASGPCFHEGIIHQALLTSIYAARKKLVITTPYLVPSDDLLYAICTAAQRGVKVHIIVPRYNDSLLVSWASRAFFTELLEAGVHIYQFEDGLLHTKSVLVDGQLSLVGTVNLDMRSLWLNFEITLVIDDTNFGNDLAKVQNYYMKRSKILANRIWSQRPYWQRIIERLFYFLSPLL
SIO_010081: TREMTM_RS00070
subclass of: SO_0000673
so part of: TREMTM_RS00070
location: 13387..14844
location: region:13387-14844:1
so has part: feature:13387-14844:1:exon

WP_156763243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13387-14844:1:exon

TREMTM_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: xthA
locus tag: TREMTM_RS00075
old locus tag: TRABTM_A_00180
so part of: sequence
location: 15083..15892
location: region:15083-15892:1
so has part: feature:15083-15892:1:exon
subclass of: SO_0000010

position:15083:1
position: 15083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15892:1
position: 15892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15083-15892:1:exon

TREMTM_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: xthA
locus tag: TREMTM_RS00075
old locus tag: TRABTM_A_00180
EC number: 3.1.11.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017893059.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease III
translation: MIFVSFNINGLRARIHQLKEIITRLHPDVIGLQETKVHDNMFPVNEILSYGYNVYYHGQKSHYGVALLSRKKPLEIRRGFCTDNNQSQKRIIMADFITKKGLLTVINGYFPHGENRNHPIKFPAKEFFFQNLQKYVEKNHNSGKSLLIIMGDMNVCFTDLDIGIEEKNSNRWLSIGKCSFLYEERIWVKRLLDWGMIDTYRKMNPTNNDYYSWFDYRSRCFNNNLGLRIDFLLASLPLSTMIKNTGIDYNIRAMNNPSDHAPVWTDFNL
SIO_010081: TREMTM_RS00075
subclass of: SO_0000673
so part of: TREMTM_RS00075
location: 15083..15892
location: region:15083-15892:1
so has part: feature:15083-15892:1:exon

WP_083172235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15083-15892:1:exon

TREMTM_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: dsbB
locus tag: TREMTM_RS00080
old locus tag: TRABTM_A_00190
so part of: sequence
location: 16090..16656
location: region:16090-16656:1
so has part: feature:16090-16656:1:exon
subclass of: SO_0000010

position:16090:1
position: 16090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16656:1
position: 16656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16090-16656:1:exon

TREMTM_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: dsbB
locus tag: TREMTM_RS00080
old locus tag: TRABTM_A_00190
EC number: 1.8.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004145511.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: disulfide bond formation protein DsbB
translation: MKKSSIFFTKNIGFFFHMIKVLYYFSQNRIIWFLLALTTLTLESVALYMQHIMLLKPCVWCIYQRCTLYGLLIASLVGIIAPKTPLRFVGLAIWIYSALQGLLLAINYLNTSSFIICDNFSNLPILLPLYKWLPLVFNTNNSYCTISKLRFFSIEMPQLMIIIFIFYLIIAVIILVAQILPLYKDKLK
SIO_010081: TREMTM_RS00080
subclass of: SO_0000673
so part of: TREMTM_RS00080
location: 16090..16656
location: region:16090-16656:1
so has part: feature:16090-16656:1:exon

WP_231893355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16090-16656:1:exon

TREMTM_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tsaB
locus tag: TREMTM_RS00085
old locus tag: TRABTM_A_00200
so part of: sequence
location: complement(16679..17392)
location: region:16679-17392:-1
so has part: feature:16679-17392:-1:exon
subclass of: SO_0000010

position:16679:-1
position: 16679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17392:-1
position: 17392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16679-17392:-1:exon

TREMTM_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tsaB
locus tag: TREMTM_RS00085
old locus tag: TRABTM_A_00200
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015580569.1
GO function: GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
translation: MPTRILAIDTATEACSAAIMLDNDILLKKFTIAPKEHTQLILPMVDSLLSEAGITLSNLDALAFSCGPGNFTGVRISIGIAQGLALGADLPLIGISTLAILAEGAWRNTGANQVLTAINAHMQKVYWAPYQRQGPGIWIGEEHEVIVETRALDTIIADFIGCWAIAGTGWQNNSAFVNYEHLQLINGKILLPNAQDILPLALHKYYHGNMKPIGLVKQNYLHNEVLWKNFQKNRKVK
SIO_010081: TREMTM_RS00085
subclass of: SO_0000673
so part of: TREMTM_RS00085
location: complement(16679..17392)
location: region:16679-17392:-1
so has part: feature:16679-17392:-1:exon

WP_083172237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16679-17392:-1:exon

TREMTM_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: pcnB
locus tag: TREMTM_RS00090
old locus tag: TRABTM_A_00210
so part of: sequence
location: complement(17412..18677)
location: region:17412-18677:-1
so has part: feature:17412-18677:-1:exon
subclass of: SO_0000010

position:17412:-1
position: 17412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18677:-1
position: 18677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17412-18677:-1:exon

TREMTM_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: pcnB
locus tag: TREMTM_RS00090
old locus tag: TRABTM_A_00210
EC number: 2.7.7.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010723084.1
GO function: GO:0004652 - polynucleotide adenylyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006378 - mRNA polyadenylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polynucleotide adenylyltransferase PcnB
translation: MEKTQKKKSSLNIIPRAKHSISRKYISKNALKVLYRLNKAGYEAYLVGGSVRDILLDKKPKDFDITTNATPEQMRKLFRNCRLVGRRFRLARVIFRSEVIEVATFRGSNLIFKSNKKLDNYIIGHNGMILRDNIFGSIEEDAQRRDFSINSLYYNIADFSVRDYTGGIKDLHKGTIRLIGDPEISYREDPLRILRAIRFAAKLDMTISYETAEPICQLAILLHNIAPARLFEETIKLLHGGYGEATYYLLRKYNLFQLLFPLVSSNLTEHGDSYVELMIIRALYNIDQQLRKNIRVNPAFLFAAILWYPLLENTKKLIYERNISYIDAFSLAIHNIFDKKFQILAIPKRLTLLIREIWQLQLSMKQCYNKLIINHKFYAAYYFLNLRAKIEKNTELHKISKWWKNYIALQQDQKNNYNIYI
SIO_010081: TREMTM_RS00090
subclass of: SO_0000673
so part of: TREMTM_RS00090
location: complement(17412..18677)
location: region:17412-18677:-1
so has part: feature:17412-18677:-1:exon

WP_083172238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17412-18677:-1:exon

TREMTM_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: dksA
locus tag: TREMTM_RS00095
old locus tag: TRABTM_A_00220
so part of: sequence
location: complement(18785..19237)
location: region:18785-19237:-1
so has part: feature:18785-19237:-1:exon
subclass of: SO_0000010

position:18785:-1
position: 18785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19237:-1
position: 19237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18785-19237:-1:exon

TREMTM_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: dksA
locus tag: TREMTM_RS00095
old locus tag: TRABTM_A_00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015580502.1
GO function: GO:0019899 - enzyme binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase-binding protein DksA
translation: MPQNESRKKSSLSILTNAGVEAYQQKPGEKYMNEAQILHFKRILEAWRNQLKKEIGRISYMQDDSVNFPDPVDRAVQEEEFSFELRNRDREHKLIKKIEKTLKKVENKNFGFCDYCGVEIGIRRLEARPTANLCIDCKNIDEIRKKQIVV
SIO_010081: TREMTM_RS00095
subclass of: SO_0000673
so part of: TREMTM_RS00095
location: complement(18785..19237)
location: region:18785-19237:-1
so has part: feature:18785-19237:-1:exon

WP_083172240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18785-19237:-1:exon

TREMTM_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: erpA
locus tag: TREMTM_RS00100
old locus tag: TRABTM_A_00231
pseudo: true
so part of: sequence
location: 19663..19994
location: region:19663-19994:1
so has part: feature:19663-19994:1:exon
subclass of: SO_0000010

position:19663:1
position: 19663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19994:1
position: 19994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19663-19994:1:exon

TREMTM_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: erpA
locus tag: TREMTM_RS00100
old locus tag: TRABTM_A_00231
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005295096.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: iron-sulfur cluster insertion protein ErpA
SIO_010081: TREMTM_RS00100
subclass of: SO_0000673
so part of: TREMTM_RS00100
location: 19663..19994
location: region:19663-19994:1
so has part: feature:19663-19994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19663-19994:1:exon

TREMTM_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00105
old locus tag: TRABTM_A_00240
so part of: sequence
location: 20056..21279
location: region:20056-21279:1
so has part: feature:20056-21279:1:exon
subclass of: SO_0000010

position:20056:1
position: 20056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21279:1
position: 21279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20056-21279:1:exon

TREMTM_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00105
old locus tag: TRABTM_A_00240
EC number: 2.7.7.72
EC number: 3.1.3.-
EC number: 3.1.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000708474.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004810 - CCA tRNA nucleotidyltransferase [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multifunctional CCA addition/repair protein
translation: MKKYLVGGAVRNRILNIPVKERDWVVVGATPQEMLAQGYKQVGKDFPVFLHPKSREEYALARTERKLDQGLHTSFICYSSPEVTLEDDLRRRDLTINAIACDDAGNLIDPYKGYRDICQRYLRHVSDAFIEDPLRVLRVTRFAASLAHLNFRIAPETLLLMQHMTDKLLLLTPERVWKETKIALLTRNPQVYFKTLRECGALKALFPEIDALFGIPSVAKWHQEIDTGIHTLLTVSMAAKLSDDIAVRFAMLCHDIGKAITPRKIWPNHHGHGFIGSKLVENLCQRLKVPKSIRNLAKLITQYHDLLHNAYITPKIIIKIFNNINIWHKSERLEQMILASEANVRGHTVFENYASHQGEFLREAFKIASSITAHDIINAGFIGTQIGNELNRQRRLALVKWKKEKNN
SIO_010081: TREMTM_RS00105
subclass of: SO_0000673
so part of: TREMTM_RS00105
location: 20056..21279
location: region:20056-21279:1
so has part: feature:20056-21279:1:exon

WP_083172242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20056-21279:1:exon

TREMTM_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tsaD
locus tag: TREMTM_RS00110
old locus tag: TRABTM_A_00250
so part of: sequence
location: complement(21377..22408)
location: region:21377-22408:-1
so has part: feature:21377-22408:-1:exon
subclass of: SO_0000010

position:21377:-1
position: 21377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22408:-1
position: 22408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21377-22408:-1:exon

TREMTM_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tsaD
locus tag: TREMTM_RS00110
old locus tag: TRABTM_A_00250
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410117.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MRILGIETSCDETGVAIYDKRQGLLANKLYSQVKLHANYGGVVPEIASRDHIRKTVPLIQAALEQADIQASDINGVAYTAGPGLVGSLMVGATIGRALAYAWKIPAIAVNHMEGHLLTPMLEINQPKLPFLALLVSGSKTQLIAVSNIGKYQILGKSLDDAAGEAFDKTAKLLGLDYPGGSMLANLAQKGVPGRYIFPRPMTDRPGLEFSFSGIKTFAAKTILKSKNDYQTRSDIARAFEDAIVETLMIKCRRALDRTGLQRLVIAGGVSANKSLRYSLTKMMQQQGGKIFFARPELCTDNGAMIAYTGMIRFKDNVQSDLSISVRPRWPLEELPMLDMQHLK
SIO_010081: TREMTM_RS00110
subclass of: SO_0000673
so part of: TREMTM_RS00110
location: complement(21377..22408)
location: region:21377-22408:-1
so has part: feature:21377-22408:-1:exon

WP_083172243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21377-22408:-1:exon

TREMTM_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsU
locus tag: TREMTM_RS00115
old locus tag: TRABTM_A_00260
so part of: sequence
location: 22613..22828
location: region:22613-22828:1
so has part: feature:22613-22828:1:exon
subclass of: SO_0000010

position:22613:1
position: 22613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22828:1
position: 22828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22613-22828:1:exon

TREMTM_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsU
locus tag: TREMTM_RS00115
old locus tag: TRABTM_A_00260
inference: COORDINATES: similar to AA sequence:RefSeq:NP_311975.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MPIIKVRENEPFDVALRRFKRSCEKSGIFAEVRRREFYEKPTTKRKRAKIFAIKRHLKKIARENVYRNRLY
SIO_010081: TREMTM_RS00115
subclass of: SO_0000673
so part of: TREMTM_RS00115
location: 22613..22828
location: region:22613-22828:1
so has part: feature:22613-22828:1:exon

WP_083172245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22613-22828:1:exon

TREMTM_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: dnaG
locus tag: TREMTM_RS00120
old locus tag: TRABTM_A_00270
so part of: sequence
location: 22909..24654
location: region:22909-24654:1
so has part: feature:22909-24654:1:exon
subclass of: SO_0000010

position:22909:1
position: 22909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24654:1
position: 24654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22909-24654:1:exon

TREMTM_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: dnaG
locus tag: TREMTM_RS00120
old locus tag: TRABTM_A_00270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011817223.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MSLKIPRVFINNLLARTDIVNLINTRIKLKKKSKNFYACCPFHYDKIPSFVVNSEKQFYHCFGCGAHGNAIDFLVNYERIDFIETIEELAAYQGIEVPYEKKFSNKNELSYRQNLYKLMNKISCFYQHNLKKQTTEKAYYYLQQRGLSEKIITNFSIGFAPSGWDNIIHRFGSSKEDRALLNKAGMIINNNSQSYDRFRERIIFPIHDTRSRIIGFGGRMLDDRQPKYINSPETEIFHKGHQLYGLYEAKQQHLELEKLLVVEGYMDVIILAEFNINYAVALLGTSITIEHIKLLYRTTDFVVCCYDGDLAGRKAAWSTLEKALPYLNDGRQLRFMFLKEGEDPDKLIRKIGKEAFEQKIKKSYPMSTFFFETLMQQVDLSSPDGRTKLSKLALPLIEKIPGDTLRLYLRQQLGIKIGILDDNKLNKLLQNTTIKLNIKSPYQCIKITTMRSLIGLLVQYPRLSNLVPTVQGLEQVSQPGVSLFVELVKTCKLYPEITTGQLLEYYRDNKYHHQLETLAIWNHLIKDQLIEQMFIDILINFYDSILEKRQEKLIAIDRIQGLTGDERRELWLLNKTLAKTF
SIO_010081: TREMTM_RS00120
subclass of: SO_0000673
so part of: TREMTM_RS00120
location: 22909..24654
location: region:22909-24654:1
so has part: feature:22909-24654:1:exon

WP_083172247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22909-24654:1:exon

TREMTM_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpoD
locus tag: TREMTM_RS00125
old locus tag: TRABTM_A_00280
so part of: sequence
location: 24795..26615
location: region:24795-26615:1
so has part: feature:24795-26615:1:exon
subclass of: SO_0000010

position:24795:1
position: 24795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26615:1
position: 26615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24795-26615:1:exon

TREMTM_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpoD
locus tag: TREMTM_RS00125
old locus tag: TRABTM_A_00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017493531.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD
translation: MEQNSKSQLKLLVKRGKKQGYLTFSEVNDHLQDEVVDPDHIEDIIQMINNMGIQVMEDTPEVDDMLLVDSDNDEDTVEAATQVLSSVESGRTNDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPENIIYLLKQYTLIESGDARLSELITGFIDPNVEDSIFPNAIHVGSKLTTNEIEDVEEDHVDSPYLDSSIDPELAKQKFMRLREQYEITSNVIKQHGRNHEKSTLAIINLSDVFKQFRLVPKQFNYLINNMRTMMDRVRTQERIIMKLCVEISKMPKNNFITLFSGNETNSSWFKTAIDMNKPWSKKLHEFDSDIHCSLHKLRQIEEETGLTINQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEIGREPNPEELAEYMLIPEDKIRKIMKIAKDPISMETPIGEDEDAHLGDFIEDTTLELPLDSATSESLRVATHASLAGLTAREAKVLRMRFGIDMHTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSDVLRSFLED
SIO_010081: TREMTM_RS00125
subclass of: SO_0000673
so part of: TREMTM_RS00125
location: 24795..26615
location: region:24795-26615:1
so has part: feature:24795-26615:1:exon

WP_083172249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24795-26615:1:exon

TREMTM_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00130
old locus tag: TRABTM_A_T0010
so part of: sequence
location: 26695..26767
location: region:26695-26767:1
so has part: feature:26695-26767:1:exon
subclass of: SO_0000663

position:26695:1
position: 26695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26767:1
position: 26767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26695-26767:1:exon

TREMTM_RS00130
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00130
old locus tag: TRABTM_A_T0010
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:26728..26730,aa:Ile,seq:cat)
SIO_010081: TREMTM_RS00130
subclass of: SO_0000673
so part of: TREMTM_RS00130
location: 26695..26767
location: region:26695-26767:1
so has part: feature:26695-26767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26695-26767:1:exon

TREMTM_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01570
old locus tag: TRABTM_A_00290
pseudo: true
so part of: sequence
location: complement(<26936..27257)
location: region:26936-27257:-1
so has part: feature:26936-27257:-1:exon
subclass of: SO_0000010

position:26936:-1
position: 26936
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:27257:-1
position: 27257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26936-27257:-1:exon

TREMTM_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01570
old locus tag: TRABTM_A_00290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019081969.1
note: involved in methylation of ribosomal protein L3; frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 50S ribosomal protein L3 N(5)-glutamine methyltransferase
SIO_010081: TREMTM_RS01570
subclass of: SO_0000673
so part of: TREMTM_RS01570
location: complement(<26936..27257)
location: region:26936-27257:-1
so has part: feature:26936-27257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26936-27257:-1:exon

TREMTM_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: grpE
locus tag: TREMTM_RS00135
old locus tag: TRABTM_A_00300
so part of: sequence
location: complement(27352..27978)
location: region:27352-27978:-1
so has part: feature:27352-27978:-1:exon
subclass of: SO_0000010

position:27352:-1
position: 27352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27978:-1
position: 27978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27352-27978:-1:exon

TREMTM_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: grpE
locus tag: TREMTM_RS00135
old locus tag: TRABTM_A_00300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411622.1
GO function: GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide exchange factor GrpE
translation: MSDKEQNTPLNEPTSKESKISEKIKNKEKNLEDQEQYQDTEVDFNKSLDLKEKRILELETELVQLQQKERDNVLRAKAEIENLRRRSEQDIEKTHKFALERFTSELLPVIDNLERALDMSDKKNSMLASTIEGIELTLKSLLDVVNKFGLNVVGDSQVPFNPEIHQAMTLIESDEHEPNQVIMVMQKGYTLNGRLIRPAMVTVSKAKN
SIO_010081: TREMTM_RS00135
subclass of: SO_0000673
so part of: TREMTM_RS00135
location: complement(27352..27978)
location: region:27352-27978:-1
so has part: feature:27352-27978:-1:exon

WP_083172250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27352-27978:-1:exon

TREMTM_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: smpB
locus tag: TREMTM_RS00140
old locus tag: TRABTM_A_00310
so part of: sequence
location: 28300..28758
location: region:28300-28758:1
so has part: feature:28300-28758:1:exon
subclass of: SO_0000010

position:28300:1
position: 28300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28758:1
position: 28758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28300-28758:1:exon

TREMTM_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: smpB
locus tag: TREMTM_RS00140
old locus tag: TRABTM_A_00310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210714.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SsrA-binding protein SmpB
translation: MKKYQSGIINIWQNKHIKHKFFIEKELEAGLSLQGWEVKSLRVNKFNINNSYVILKHGEAYLLGAIFQPINISFFDSMRIRKLLLNKNELSLLFSKIKRTGYTVVPLSLYWKKSWVKIKIGIAKGKKEYDKRTDIKKREWNIDKARIRKYNI
SIO_010081: TREMTM_RS00140
subclass of: SO_0000673
so part of: TREMTM_RS00140
location: 28300..28758
location: region:28300-28758:1
so has part: feature:28300-28758:1:exon

WP_083172252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28300-28758:1:exon

TREMTM_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ssrA
locus tag: TREMTM_RS00145
old locus tag: TRABTM_A_NC0020
so part of: sequence
location: 28762..29142
location: region:28762-29142:1
so has part: feature:28762-29142:1:exon
subclass of: SO_0000659

position:28762:1
position: 28762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29142:1
position: 29142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28762-29142:1:exon

TREMTM_RS00145
type: Transfer Messenger RNA
subclass of: SO_0000584
RO_0002162: 1835721
gene: ssrA
locus tag: TREMTM_RS00145
old locus tag: TRABTM_A_NC0020
product: transfer-messenger RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00023
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TREMTM_RS00145
subclass of: SO_0000673
so part of: TREMTM_RS00145
location: 28762..29142
location: region:28762-29142:1
so has part: feature:28762-29142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28762-29142:1:exon

TREMTM_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tadA
locus tag: TREMTM_RS00150
old locus tag: TRABTM_A_00320
so part of: sequence
location: complement(29163..29648)
location: region:29163-29648:-1
so has part: feature:29163-29648:-1:exon
subclass of: SO_0000010

position:29163:-1
position: 29163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29648:-1
position: 29648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29163-29648:-1:exon

TREMTM_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tadA
locus tag: TREMTM_RS00150
old locus tag: TRABTM_A_00320
EC number: 3.5.4.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017489876.1
GO function: GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA adenosine(34) deaminase TadA
translation: MDIYMNYSDKLWMNHALMLTERAEVEEEIPVGAVLILNGNIIGEGWNSSIGHNDPTAHAEIIALRQGGQRIKNYRLLESIMYVTLEPCIMCAGAMIHARISRLVFGAKAKKNGAAGSFLNILKNKNINHKIIINSGIQAQQCSLQLSKFFQQCRYRKKIRF
SIO_010081: TREMTM_RS00150
subclass of: SO_0000673
so part of: TREMTM_RS00150
location: complement(29163..29648)
location: region:29163-29648:-1
so has part: feature:29163-29648:-1:exon

WP_083172253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29163-29648:-1:exon

TREMTM_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00155
old locus tag: TRABTM_A_00330
so part of: sequence
location: complement(29720..32071)
location: region:29720-32071:-1
so has part: feature:29720-32071:-1:exon
subclass of: SO_0000010

position:29720:-1
position: 29720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32071:-1
position: 32071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29720-32071:-1:exon

TREMTM_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00155
old locus tag: TRABTM_A_00330
inference: COORDINATES: protein motif:HMM:NF013117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3772 domain-containing protein
translation: MFKKILFKLFSLILILNLVLNITTTASANTLGASIPLKLNAVIEISKLQKDLDLLKQKLSKNITNNQLSILNTNTLQLTSAAETLITRLLPDSTQLQVQLDVIGPTPTSFVKETSTIAYSRDNINARKKLLDNQIECAKFIIFSANKILVQIVTIHRNNILSQLILNSGSIFSANFWSPILHPKLEDKHRITSLVNNINLCWQQAWSSDFILVSSILLVLTIILWFCSSLFLDKLLFWFSINMLPERMHCSFIVCSTVLITVLNISLGAQLFYLMVTSLPNVSYEVIDFADGIKCLIFFSSLIFGLGRAFLSKNCSYSQFLTIHDAIYHKIKKIPILLAILVFISGTIEQLNSSLSTSVSTTIWGYGISSLLITSVILFICFSKIRIKSTQLNLRSIKSKIEINSAIVDIIQICIFTFSITIFISLLIGYISLARFLTYELVWIAMVLFIFYLLMHFMVDFFESVFTPNTLIGVRIKHMFNIEERHLLQISTLLTAISKILLIMFAIIALINGNFEYITPLTLIPKVIKLCGVFEKLVVPANILNALIFFAIAIYILRLIKNWLEKDFLTKTMIEPGIRYSLVTLFSNFVYVLVIFILLAILGIKWDNIAWIVSALTVGIGFGLQEIVKNFISGLILLIEQKVKVGDLISISGIEGDIRCINIRATEIKINDRSTVIVPNFQLISQNVRNITMGNAQGVVTIELTFSLDINTEKVCMLLLEVYNKHKEIQVTPTPSVTFSQLNSAGIVLSITGFVRSSRIVASTKSELLVEILKNLRSNGIKL
SIO_010081: TREMTM_RS00155
subclass of: SO_0000673
so part of: TREMTM_RS00155
location: complement(29720..32071)
location: region:29720-32071:-1
so has part: feature:29720-32071:-1:exon

WP_083172255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29720-32071:-1:exon

TREMTM_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00160
old locus tag: TRABTM_A_T0020
so part of: sequence
location: 32183..32258
location: region:32183-32258:1
so has part: feature:32183-32258:1:exon
subclass of: SO_0000663

position:32183:1
position: 32183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32258:1
position: 32258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32183-32258:1:exon

TREMTM_RS00160
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00160
old locus tag: TRABTM_A_T0020
product: tRNA-Phe
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:32216..32218,aa:Phe,seq:gaa)
SIO_010081: TREMTM_RS00160
subclass of: SO_0000673
so part of: TREMTM_RS00160
location: 32183..32258
location: region:32183-32258:1
so has part: feature:32183-32258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32183-32258:1:exon

TREMTM_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: trpS
locus tag: TREMTM_RS00165
old locus tag: TRABTM_A_00340
so part of: sequence
location: complement(32290..33285)
location: region:32290-33285:-1
so has part: feature:32290-33285:-1:exon
subclass of: SO_0000010

position:32290:-1
position: 32290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33285:-1
position: 33285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32290-33285:-1:exon

TREMTM_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: trpS
locus tag: TREMTM_RS00165
old locus tag: TRABTM_A_00340
EC number: 6.1.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014539686.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MSKPIVFSGAQPSGELTIGNYIGAISKWVSMQNDYNCIYCIVDLHAITNRHNIQHLHKTTLDLTAMYLACGIDPFKSIIFIQSHIPEHSQMNWLLNCYTYLGELSRMTQFKDKYAHSAKNINAGLFNYPVLMAADILLYQTSKVPIGEDQKQHLELSRNIAKRFNALYGDIFTIPEPFISERNVRVMSLLNPKKKMSKSDINKKNIISLIEEPKSIVNKLKCAVTDSDYPPIIRYDPVNKPGVSNLLNILSSVTDTPIAKLEQNFNGKMYGYLKYVVTDALLEMLTSLQSRYYSLRADENYLKEILREGAKKAKIKANLTLYKSYKAVGFI
SIO_010081: TREMTM_RS00165
subclass of: SO_0000673
so part of: TREMTM_RS00165
location: complement(32290..33285)
location: region:32290-33285:-1
so has part: feature:32290-33285:-1:exon

WP_083172256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32290-33285:-1:exon

TREMTM_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: aroK
locus tag: TREMTM_RS00170
old locus tag: TRABTM_A_00350
so part of: sequence
location: complement(33417..33932)
location: region:33417-33932:-1
so has part: feature:33417-33932:-1:exon
subclass of: SO_0000010

position:33417:-1
position: 33417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33932:-1
position: 33932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33417-33932:-1:exon

TREMTM_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: aroK
locus tag: TREMTM_RS00170
old locus tag: TRABTM_A_00350
EC number: 2.7.1.71
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate kinase AroK
translation: MAEKRNIFLIGPIGAGKSTIGRQLAEQLNIEFFDSDKEIERRTGADLSWVFDVEGENGFRYREEKIINELTKKQGIVLATGGGSVKSCEISNLLASRGIVIYLKTTIEKQLDRTSLDKRRPLLQGKTNQRDIFTVLAKERNPLYEKIADITICTDKKSTKIVINKIINILK
SIO_010081: TREMTM_RS00170
subclass of: SO_0000673
so part of: TREMTM_RS00170
location: complement(33417..33932)
location: region:33417-33932:-1
so has part: feature:33417-33932:-1:exon

WP_083172258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33417-33932:-1:exon

TREMTM_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: sucC
locus tag: TREMTM_RS00175
old locus tag: TRABTM_A_00360
so part of: sequence
location: 34199..35356
location: region:34199-35356:1
so has part: feature:34199-35356:1:exon
subclass of: SO_0000010

position:34199:1
position: 34199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35356:1
position: 35356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34199-35356:1:exon

TREMTM_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: sucC
locus tag: TREMTM_RS00175
old locus tag: TRABTM_A_00360
EC number: 6.2.1.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP-forming succinate--CoA ligase subunit beta
translation: MNLYEYQSKQLFAKYGLPIPTGYICSSLSEVEKLSLGIEPWIAKCQVYAGGRGKAGGIKIIKSKEELRLFAKHWFGNRLITSQTDALGQQVNHILVEKATFITKELYLGLIIDRSICSIIFIASIEGGIEIEKIAEKNPHLIHKITLDNLTGPHPYQARQLAFKLGLFGKQISQFVKIFIGLATLFLERDLELVEINPLVINNNNDLICLDSKLSIDSNALFRQSKFRNIYNKNNQQDKCEAHHRQLNYLVLDGNIGCMVNGAGLAMGTMDIVKLYGGKPANFLDIGGGATKERVTEYFQLILSNKNVKAILINIFGGIVRCDLIADGIINAISKISINIPVVVRLEGNNAKQGNKILAKSMLNIIVTNNLIDAVKQVIAAVKDK
SIO_010081: TREMTM_RS00175
subclass of: SO_0000673
so part of: TREMTM_RS00175
location: 34199..35356
location: region:34199-35356:1
so has part: feature:34199-35356:1:exon

WP_083172624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34199-35356:1:exon

TREMTM_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: sucD
locus tag: TREMTM_RS00180
old locus tag: TRABTM_A_00370
so part of: sequence
location: 35356..36249
location: region:35356-36249:1
so has part: feature:35356-36249:1:exon
subclass of: SO_0000010

position:36249:1
position: 36249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35356-36249:1:exon

TREMTM_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: sucD
locus tag: TREMTM_RS00180
old locus tag: TRABTM_A_00370
EC number: 6.2.1.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017494262.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: succinate--CoA ligase subunit alpha
translation: MSILINKNTKVICQGFTGNQGTFHSKNALAYGTKIVGGVTPNKGGTKHLGLPVFNTVQEAVDKTCATTSVIYVPAPFCKDSILEAIDAGINLIICITEGIPTLDMLIVKAKLERNNKIRMIGPNSPGIITPGECKIGIMPENIHKSGLIGIISRSGTLTYEAVKQITDAGLGQSTCVGIGGDPISGSNFIDILKLFEKDQQTKAILMIGEIGGSAEEEAAAYIKKHKINKQVISYIAGVTAPKGKHMGHAGAIIAGSKGTANAKFKELESAGVKIVRNIADIGKFLKSIFYKKTDIS
SIO_010081: TREMTM_RS00180
subclass of: SO_0000673
so part of: TREMTM_RS00180
location: 35356..36249
location: region:35356-36249:1
so has part: feature:35356-36249:1:exon

WP_083172260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35356-36249:1:exon

TREMTM_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00185
old locus tag: TRABTM_A_00380
pseudo: true
so part of: sequence
location: 36321..37846
location: region:36321-37846:1
so has part: feature:36321-37846:1:exon
subclass of: SO_0000010

position:36321:1
position: 36321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37846:1
position: 37846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36321-37846:1:exon

TREMTM_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00185
old locus tag: TRABTM_A_00380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005125442.1
GO component: GO:0070069 - cytochrome complex [Evidence IEA]
GO function: GO:0009055 - electron transfer activity [Evidence IEA]
GO process: GO:0019646 - aerobic electron transport chain [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytochrome ubiquinol oxidase subunit I
SIO_010081: TREMTM_RS00185
subclass of: SO_0000673
so part of: TREMTM_RS00185
location: 36321..37846
location: region:36321-37846:1
so has part: feature:36321-37846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36321-37846:1:exon

TREMTM_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: cydB
locus tag: TREMTM_RS00190
old locus tag: TRABTM_A_00400
so part of: sequence
location: 37870..38973
location: region:37870-38973:1
so has part: feature:37870-38973:1:exon
subclass of: SO_0000010

position:37870:1
position: 37870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38973:1
position: 38973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37870-38973:1:exon

TREMTM_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: cydB
locus tag: TREMTM_RS00190
old locus tag: TRABTM_A_00400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004393310.1
GO function: GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome d ubiquinol oxidase subunit II
translation: MFNYEFLRFIWWVLIGLFIIIFTITEGFDMGVGILMRFSCYSDIERKIMINTIAPHWDGNQVWLITTIGALFAVWPIVYAIIFSGFYIAIILLLVSLFFRPISFEFLSKIDNLRWRNLCYWGIFIGSFISPIVMGIIFGNLLQGIPFYIDMYMRLYYTGNFFQLLNPFSLLLSTIIIAMFLTQGSTYIQMRTSSNSNLQVKMRNITKLTALITIIMFFLAIILFIKSIDGFTITSIIDQSAQSNPLHKEVKYHAGAWMVNYWNYPILLIFPLLGLLLPFFTIIYSYIKISVFAFISSSFTIACIISTIGITIFPFIIPSITMPNVSLTMWDATSSLNTLKLMFIIVIILLPIVLSYTIWCYYKMFNF
SIO_010081: TREMTM_RS00190
subclass of: SO_0000673
so part of: TREMTM_RS00190
location: 37870..38973
location: region:37870-38973:1
so has part: feature:37870-38973:1:exon

WP_083172261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37870-38973:1:exon

TREMTM_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00195
old locus tag: TRABTM_A_T0030
so part of: sequence
location: complement(39130..39205)
location: region:39130-39205:-1
so has part: feature:39130-39205:-1:exon
subclass of: SO_0000663

position:39130:-1
position: 39130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39205:-1
position: 39205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39130-39205:-1:exon

TREMTM_RS00195
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00195
old locus tag: TRABTM_A_T0030
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(39170..39172),aa:Asp,seq:gtc)
SIO_010081: TREMTM_RS00195
subclass of: SO_0000673
so part of: TREMTM_RS00195
location: complement(39130..39205)
location: region:39130-39205:-1
so has part: feature:39130-39205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39130-39205:-1:exon

TREMTM_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: dnaQ
locus tag: TREMTM_RS00200
old locus tag: TRABTM_A_00410
so part of: sequence
location: complement(39303..40046)
location: region:39303-40046:-1
so has part: feature:39303-40046:-1:exon
subclass of: SO_0000010

position:39303:-1
position: 39303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40046:-1
position: 40046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39303-40046:-1:exon

TREMTM_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: dnaQ
locus tag: TREMTM_RS00200
old locus tag: TRABTM_A_00410
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014887869.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit epsilon
translation: MNTNILRQISLDIETTGMKKFGLPYKGHRIIEIGAIEIINRKITGKYFHSYLKPNRTIDNEAFNLHGISNKFLNDKPIFAEIAEDFLNFIYDSELIIHNAFFDIGFIDYEFNMLNCGMNNIHTFCKITDSLLLARKIFPGKRNNLDALCDRYLIDNSKRTNHSALIDAKILAEIFLLMTSGQTVMEFLKEEEQEKYESEKNMQIQKMRHSKMMMKIIYANNEEILAHEQLLDIIQKKSGSCLWRTRF
SIO_010081: TREMTM_RS00200
subclass of: SO_0000673
so part of: TREMTM_RS00200
location: complement(39303..40046)
location: region:39303-40046:-1
so has part: feature:39303-40046:-1:exon

WP_083172263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39303-40046:-1:exon

TREMTM_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rnhA
locus tag: TREMTM_RS00205
old locus tag: TRABTM_A_00420
so part of: sequence
location: 40101..40610
location: region:40101-40610:1
so has part: feature:40101-40610:1:exon
subclass of: SO_0000010

position:40101:1
position: 40101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40610:1
position: 40610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40101-40610:1:exon

TREMTM_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rnhA
locus tag: TREMTM_RS00205
old locus tag: TRABTM_A_00420
EC number: 3.1.26.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410344.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HI
translation: MCQQIEIFTDGSCLGNPGPGGYCAILYYKKLFYKNYEKTFSAGYRLTTNNRMELMAAIIALESLTEKCKVVIITDSQYLRKGITEWVNNWKKRYWKTYDNKPVKNVDLWKRLDAAIKPHNLRWNWVKGHSGNFKNEQCNKIARIAANYPYLEDDIGYCIESSTNIYLSD
SIO_010081: TREMTM_RS00205
subclass of: SO_0000673
so part of: TREMTM_RS00205
location: 40101..40610
location: region:40101-40610:1
so has part: feature:40101-40610:1:exon

WP_083172265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40101-40610:1:exon

TREMTM_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00210
old locus tag: TRABTM_A_T0040
so part of: sequence
location: complement(40708..40780)
location: region:40708-40780:-1
so has part: feature:40708-40780:-1:exon
subclass of: SO_0000663

position:40708:-1
position: 40708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40780:-1
position: 40780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40708-40780:-1:exon

TREMTM_RS00210
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00210
old locus tag: TRABTM_A_T0040
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(40745..40747),aa:Lys,seq:ttt)
SIO_010081: TREMTM_RS00210
subclass of: SO_0000673
so part of: TREMTM_RS00210
location: complement(40708..40780)
location: region:40708-40780:-1
so has part: feature:40708-40780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40708-40780:-1:exon

TREMTM_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00215
old locus tag: TRABTM_A_T0050
so part of: sequence
location: complement(40789..40861)
location: region:40789-40861:-1
so has part: feature:40789-40861:-1:exon
subclass of: SO_0000663

position:40789:-1
position: 40789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40861:-1
position: 40861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40789-40861:-1:exon

TREMTM_RS00215
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00215
old locus tag: TRABTM_A_T0050
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(40826..40828),aa:Val,seq:tac)
SIO_010081: TREMTM_RS00215
subclass of: SO_0000673
so part of: TREMTM_RS00215
location: complement(40789..40861)
location: region:40789-40861:-1
so has part: feature:40789-40861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40789-40861:-1:exon

TREMTM_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: gltX
locus tag: TREMTM_RS00220
old locus tag: TRABTM_A_00430
so part of: sequence
location: 40999..42423
location: region:40999-42423:1
so has part: feature:40999-42423:1:exon
subclass of: SO_0000010

position:40999:1
position: 40999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42423:1
position: 42423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40999-42423:1:exon

TREMTM_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: gltX
locus tag: TREMTM_RS00220
old locus tag: TRABTM_A_00430
EC number: 6.1.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411501.1
GO component: GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO function: GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate--tRNA ligase
translation: MKIKTRFAPSPTGYLHIGSVRTALYSWLFACKKKGKFVLRVEDSDSERSTKLAIEAIIESMNWLNLSWDEGPYFQTKRLNRYNMIINDMLHKKIAYKCYCSKERLRNLRKLQIAQGKKPKYDGFCKNNYEHHTNDEPYVVRFSNPQTGSIVFNDLIRGSIEFKNKEMDDLIIRRTDGSYTYNFCVVVDDFDMKITHVIRGEDHINNTPRQINILKAIGAPVPYYAHVSMILGNDGKKLSKRHGAVGIMQYRDDGFLPEALINYLIRLGWSYGDQEIFSIEEMKKKFNIKAINKSASIFDIKKLLWFNQYYINKLPAEYIANNLIWHLNNQGIDTKNGPLLIDLVKILSKRCKTLKEMAANCCYFYNDFIEFDKNIAKKYLCSATQTLHKMRQKLISLNEWTPDSLNLIIKKTADELKISMENICMQLRVAVTGISSSPAINITIYTLGKLRSLAHIEQALNFINCHSSKEFTKY
SIO_010081: TREMTM_RS00220
subclass of: SO_0000673
so part of: TREMTM_RS00220
location: 40999..42423
location: region:40999-42423:1
so has part: feature:40999-42423:1:exon

WP_083172266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40999-42423:1:exon

TREMTM_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00225
old locus tag: TRABTM_A_T0060
so part of: sequence
location: 42474..42547
location: region:42474-42547:1
so has part: feature:42474-42547:1:exon
subclass of: SO_0000663

position:42474:1
position: 42474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42547:1
position: 42547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42474-42547:1:exon

TREMTM_RS00225
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00225
old locus tag: TRABTM_A_T0060
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:42508..42510,aa:Ala,seq:ggc)
SIO_010081: TREMTM_RS00225
subclass of: SO_0000673
so part of: TREMTM_RS00225
location: 42474..42547
location: region:42474-42547:1
so has part: feature:42474-42547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42474-42547:1:exon

TREMTM_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: bamD
locus tag: TREMTM_RS00230
old locus tag: TRABTM_A_00440
so part of: sequence
location: complement(42697..43407)
location: region:42697-43407:-1
so has part: feature:42697-43407:-1:exon
subclass of: SO_0000010

position:42697:-1
position: 42697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43407:-1
position: 43407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42697-43407:-1:exon

TREMTM_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: bamD
locus tag: TREMTM_RS00230
old locus tag: TRABTM_A_00440
inference: COORDINATES: protein motif:HMM:TIGR03302.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0065003 - protein-containing complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamD
translation: MQIKYITLAYSIGLLLIGCLNQDCLNHKNILIKNNPSDIYLYAQQKLYNGNCNNDTLIAIKNFKFLKNYNLITSYAQQIQLNLIYAYYKLTSFSFAQSSINNFLLFNSNHPNIDYVIYMQGLINMARDSNNLLQGLFGINSNTNTKYVRTALLNFIQLINTYPNSQYSDNIKYIIYLKNSIADYELSIIKYYYKCESYIAVNKRVEKMLRNFENTKAIKKALFFYEKSYEKLYLNY
SIO_010081: TREMTM_RS00230
subclass of: SO_0000673
so part of: TREMTM_RS00230
location: complement(42697..43407)
location: region:42697-43407:-1
so has part: feature:42697-43407:-1:exon

WP_083172268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42697-43407:-1:exon

TREMTM_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rluD
locus tag: TREMTM_RS00235
old locus tag: TRABTM_A_00450
so part of: sequence
location: 43483..44433
location: region:43483-44433:1
so has part: feature:43483-44433:1:exon
subclass of: SO_0000010

position:43483:1
position: 43483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44433:1
position: 44433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43483-44433:1:exon

TREMTM_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rluD
locus tag: TREMTM_RS00235
old locus tag: TRABTM_A_00450
EC number: 5.4.99.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017349744.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
translation: MVIITGILKKSQLGKRLDQALAELFSSYSRSQIKKFILKGLVRLNDKVKLIPKEKIYGNENVEIQIIKKEICKSQNIPLNIVYEDEYILVINKKANLVVHPGAGNSENTILNALLYYFPPIVKVPRAGIVHRLDKNTTGLMVIAKTILAYIRLVNFFKMRNIIREYEAITIGNIISGGTVNQPIARHYSNRMQMIVCSNGKKAITHYRIIERFRAHTHLRLRLDTGRTHQIRVHMAYINYPLLGDPLYSKKEKISKISSEKINNLLQYFNRQALHAVSLGFYHPITSIKMKWNISLPQDMLNLIIALREDSLNKSI
SIO_010081: TREMTM_RS00235
subclass of: SO_0000673
so part of: TREMTM_RS00235
location: 43483..44433
location: region:43483-44433:1
so has part: feature:43483-44433:1:exon

WP_083172270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43483-44433:1:exon

TREMTM_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: clpB
locus tag: TREMTM_RS00240
old locus tag: TRABTM_A_00460
so part of: sequence
location: 44468..47044
location: region:44468-47044:1
so has part: feature:44468-47044:1:exon
subclass of: SO_0000010

position:44468:1
position: 44468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47044:1
position: 47044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44468-47044:1:exon

TREMTM_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: clpB
locus tag: TREMTM_RS00240
old locus tag: TRABTM_A_00460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0042026 - protein refolding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent chaperone ClpB
translation: MHLDRFTNKFQLALAEAQYLSLERKNEFIEPIHVMLALLKNKNDNVYSLLQFADVNIVSFINSIEHACEHLPRKNEISGNVQLSQDLIRIFNLCDKIAQKYEENFISSKIFVLASLEVNGILKDILKSAGVTTTTITKAIEKIINGEFVKNKNTEDYSKVLKKFTIDLTEYAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIIEGLAQRIVNGEVPEGLKKNRVLSLDIGLLIAGAKYRGEFEERLKSLLNDLSKNEVNIILFIDELHTMVGTGNNDGAMDASNMLKPALARGELHCVGATTLDEYRKFIEKDAALERRFQKIFVFEPNIEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRKLPDKAIDLIDEAASSIRIQIDSKPEDLDRLERRIIQLKLEQQALKKESDESSIKRLKIINDELNQKEKDFSELEEEWKSEKNSLLKNQNLKKELEKAKILIEQAKRVGDLALMSELQYGKIPEIEKKIVTISQSVNKSLRLLRNRVTDIEIAEVLARWTGIPVSKMLETEREKILHIEHNLHQKIIGQNEAVEAVANAIRRSRTGLADPNRPIGSFMFLGPTGVGKTELCKTLAMFLFDSDSAIIRIDMSEFMEKHSVSKLVGAPPGYIGYEEGGFLTEAVKRRPYSVILLDEIEKAHSDVFNILLQLLDDGRLTDCKGRTVDFRNTIVILTSNLGSDIIQDRFNKINYFEIKKIVLNIVSHHFRPEFINRIDDIVVFHPLNNDHLIKIAQIQLKNLYQRLESKGYRLSSINDRVLNFLCKSSFDPIYGARPLKRIIKQEIENPLSQKILSENLLPNKSIILDVKDNHLIINQ
SIO_010081: TREMTM_RS00240
subclass of: SO_0000673
so part of: TREMTM_RS00240
location: 44468..47044
location: region:44468-47044:1
so has part: feature:44468-47044:1:exon

WP_083172272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44468-47044:1:exon

TREMTM_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00245
old locus tag: TRABTM_A_R0010
so part of: sequence
location: 47393..48942
location: region:47393-48942:1
so has part: feature:47393-48942:1:exon
subclass of: SO_0000573

position:47393:1
position: 47393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48942:1
position: 48942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47393-48942:1:exon

TREMTM_RS00245
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1835721
locus tag: TREMTM_RS00245
old locus tag: TRABTM_A_R0010
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TREMTM_RS00245
subclass of: SO_0000673
so part of: TREMTM_RS00245
location: 47393..48942
location: region:47393-48942:1
so has part: feature:47393-48942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47393-48942:1:exon

TREMTM_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00250
old locus tag: TRABTM_A_T0070
so part of: sequence
location: 49013..49089
location: region:49013-49089:1
so has part: feature:49013-49089:1:exon
subclass of: SO_0000663

position:49013:1
position: 49013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49089:1
position: 49089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49013-49089:1:exon

TREMTM_RS00250
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00250
old locus tag: TRABTM_A_T0070
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:49047..49049,aa:Ile,seq:gat)
SIO_010081: TREMTM_RS00250
subclass of: SO_0000673
so part of: TREMTM_RS00250
location: 49013..49089
location: region:49013-49089:1
so has part: feature:49013-49089:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49013-49089:1:exon

TREMTM_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00255
old locus tag: TRABTM_A_T0080
so part of: sequence
location: 49129..49204
location: region:49129-49204:1
so has part: feature:49129-49204:1:exon
subclass of: SO_0000663

position:49129:1
position: 49129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49204:1
position: 49204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49129-49204:1:exon

TREMTM_RS00255
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00255
old locus tag: TRABTM_A_T0080
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:49162..49164,aa:Ala,seq:tgc)
SIO_010081: TREMTM_RS00255
subclass of: SO_0000673
so part of: TREMTM_RS00255
location: 49129..49204
location: region:49129-49204:1
so has part: feature:49129-49204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49129-49204:1:exon

TREMTM_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00260
old locus tag: TRABTM_A_R0020
so part of: sequence
location: 49256..52177
location: region:49256-52177:1
so has part: feature:49256-52177:1:exon
subclass of: SO_0000573

position:49256:1
position: 49256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52177:1
position: 52177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49256-52177:1:exon

TREMTM_RS00260
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1835721
locus tag: TREMTM_RS00260
old locus tag: TRABTM_A_R0020
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TREMTM_RS00260
subclass of: SO_0000673
so part of: TREMTM_RS00260
location: 49256..52177
location: region:49256-52177:1
so has part: feature:49256-52177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49256-52177:1:exon

TREMTM_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rrf
locus tag: TREMTM_RS00265
old locus tag: TRABTM_A_R0030
so part of: sequence
location: 52210..52325
location: region:52210-52325:1
so has part: feature:52210-52325:1:exon
subclass of: SO_0000573

position:52210:1
position: 52210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52325:1
position: 52325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52210-52325:1:exon

TREMTM_RS00265
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1835721
gene: rrf
locus tag: TREMTM_RS00265
old locus tag: TRABTM_A_R0030
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TREMTM_RS00265
subclass of: SO_0000673
so part of: TREMTM_RS00265
location: 52210..52325
location: region:52210-52325:1
so has part: feature:52210-52325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52210-52325:1:exon

TREMTM_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: asnS
locus tag: TREMTM_RS00270
old locus tag: TRABTM_A_00630
so part of: sequence
location: complement(52335..53732)
location: region:52335-53732:-1
so has part: feature:52335-53732:-1:exon
subclass of: SO_0000010

position:52335:-1
position: 52335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53732:-1
position: 53732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52335-53732:-1:exon

TREMTM_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: asnS
locus tag: TREMTM_RS00270
old locus tag: TRABTM_A_00630
EC number: 6.1.1.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1
GO function: GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparagine--tRNA ligase
translation: MILSIVEVLQCRVIENSTVTVHGWVRTRRDSKTGISFLAIYDGSCFNSLQIVINNTLPNYNNEIRRLTTGCSVSITGKVVKSLSIGHNYEIKASKIEVIGWIDNPNTYPIAAKKHSLEYLREVSHLRSRTNIMGAVIRIRHTIAQAIHRFMNENGFLWVSTPLITASNTEGAGEMFRVSTLDLENLPRSHNGKVNYDKDFFGKEAFLTVSGQLNGESYACAMSKIYTFGPIFRAENSNTSRHLAEFWMVEPEIAFATLTDISVLAESMLKYLFKTVLIESYDDIQFFTKFFNKEVKNSIIKIINTDFAQIDYTEAISILQKNSKNFKNTVFWGMDLSSEYERFLAEKYFQAPVIVKNYPKNIKAFYMRINDDEKTVAAMDILVPGMGEIIGGSQREERLDRLDARLTEMGLNKENYWWYRDLRRYGTVPHSGFGLGLERLIAYITGIQNIRDVIPFPRTTKNISF
SIO_010081: TREMTM_RS00270
subclass of: SO_0000673
so part of: TREMTM_RS00270
location: complement(52335..53732)
location: region:52335-53732:-1
so has part: feature:52335-53732:-1:exon

WP_083172273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52335-53732:-1:exon

TREMTM_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00275
old locus tag: TRABTM_A_T0090
so part of: sequence
location: 54025..54111
location: region:54025-54111:1
so has part: feature:54025-54111:1:exon
subclass of: SO_0000663

position:54025:1
position: 54025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54111:1
position: 54111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54025-54111:1:exon

TREMTM_RS00275
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00275
old locus tag: TRABTM_A_T0090
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:54059..54061,aa:Ser,seq:cga)
SIO_010081: TREMTM_RS00275
subclass of: SO_0000673
so part of: TREMTM_RS00275
location: 54025..54111
location: region:54025-54111:1
so has part: feature:54025-54111:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54025-54111:1:exon

TREMTM_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: secA
locus tag: TREMTM_RS00280
old locus tag: TRABTM_A_00640
pseudo: true
so part of: sequence
location: complement(<54259..56745)
location: region:54259-56745:-1
so has part: feature:54259-56745:-1:exon
subclass of: SO_0000010

position:54259:-1
position: 54259
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:56745:-1
position: 56745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54259-56745:-1:exon

TREMTM_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: secA
locus tag: TREMTM_RS00280
old locus tag: TRABTM_A_00640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410430.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: preprotein translocase subunit SecA
SIO_010081: TREMTM_RS00280
subclass of: SO_0000673
so part of: TREMTM_RS00280
location: complement(<54259..56745)
location: region:54259-56745:-1
so has part: feature:54259-56745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54259-56745:-1:exon

TREMTM_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00285
old locus tag: TRABTM_A_00650
so part of: sequence
location: 56845..57327
location: region:56845-57327:1
so has part: feature:56845-57327:1:exon
subclass of: SO_0000010

position:56845:1
position: 56845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57327:1
position: 57327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56845-57327:1:exon

TREMTM_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00285
old locus tag: TRABTM_A_00650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004932751.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DciA family protein
translation: MRDILTSNLDILFTNKTPHMSLLYIQQRGIMLLNLNRIVNKLLPVPLRFWCRVANIHQSVMVIEIANASWKLRFLYEQHQLLSALKKQILPSLSSINIKINPDLDKKKERSIQNTEKKRHLSVQSAAYISNVAKKISQKKLKNALERLTKLSIESTDSFC
SIO_010081: TREMTM_RS00285
subclass of: SO_0000673
so part of: TREMTM_RS00285
location: 56845..57327
location: region:56845-57327:1
so has part: feature:56845-57327:1:exon

WP_083172275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56845-57327:1:exon

TREMTM_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rsmH
locus tag: TREMTM_RS00290
old locus tag: TRABTM_A_00660
so part of: sequence
location: complement(57414..58361)
location: region:57414-58361:-1
so has part: feature:57414-58361:-1:exon
subclass of: SO_0000010

position:57414:-1
position: 57414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58361:-1
position: 58361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57414-58361:-1:exon

TREMTM_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rsmH
locus tag: TREMTM_RS00290
old locus tag: TRABTM_A_00660
EC number: 2.1.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410414.1
GO function: GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
translation: MSKNYLHKTVFLNEAVKSLNINPDGVYLDGTFGRGGHSRLILSKINANGHLFAIDRDPTAVEIANNIKDYRFTIIHGLLSKITFHMAKWNLIGRINGILLDLGVSSPQFEDPKRGFSFKNDGLLDMRMDKNCGQSAAQWLTRASVDDITFVLKKFGDERFAKRIAKAIFLRNRHHPPITRNQELVALITNNIPFRDKHKHPARRSFQAIRIYINNELKEIKQALDGALTLLAPGGRLSVISFHSIEDRLVKQFIRQHSRIPQIIAKLPLTEQQISAQYNNNRLQLKSIGKILPSTQEINENQRSRSAVLRIAEKI
SIO_010081: TREMTM_RS00290
subclass of: SO_0000673
so part of: TREMTM_RS00290
location: complement(57414..58361)
location: region:57414-58361:-1
so has part: feature:57414-58361:-1:exon

WP_083172276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57414-58361:-1:exon

TREMTM_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: leuB
locus tag: TREMTM_RS00295
old locus tag: TRABTM_A_00670
so part of: sequence
location: 58542..59624
location: region:58542-59624:1
so has part: feature:58542-59624:1:exon
subclass of: SO_0000010

position:58542:1
position: 58542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59624:1
position: 59624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58542-59624:1:exon

TREMTM_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: leuB
locus tag: TREMTM_RS00295
old locus tag: TRABTM_A_00670
EC number: 1.1.1.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012105676.1
GO function: GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydrogenase
translation: MIKTYHIAVLPGDGIGPEVIKQAYKIINAVRRKFNVIISTKEYDVGGIAIDNYGKPLPVGTIAGCEQADAILLGSVGGPKWEHMPAAEQPERGALLPLRKHFRLFSNLRPSRLYPGLEYYCPLRTDIAKRGFDILCVRELTGGIYFGQKGREGAGQQEYAFDTELYYRFEIERIARIAFQSARKRRKIVASIDKANVLQSSILWREVVNTVAQNYPDVALSHLYVDNATMQLIKEPSQFDVMLCSNLFGDIISDECAMLTGSMGMLPSASLNEQKFGIYEPAGGSAPDIAGKNIANPVAQILSTALLFRYSLDLNDAADAIERAVNHAFKYGYRTADLVSDNNAVSTEEMGDIIAALILK
SIO_010081: TREMTM_RS00295
subclass of: SO_0000673
so part of: TREMTM_RS00295
location: 58542..59624
location: region:58542-59624:1
so has part: feature:58542-59624:1:exon

WP_083172278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58542-59624:1:exon

TREMTM_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: leuC
locus tag: TREMTM_RS00300
old locus tag: TRABTM_A_00680
so part of: sequence
location: 59644..61044
location: region:59644-61044:1
so has part: feature:59644-61044:1:exon
subclass of: SO_0000010

position:59644:1
position: 59644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61044:1
position: 61044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59644-61044:1:exon

TREMTM_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: leuC
locus tag: TREMTM_RS00300
old locus tag: TRABTM_A_00680
EC number: 4.2.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410298.1
GO component: GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO function: GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase large subunit
translation: MVKSLYQKLYDAHVVYEVENEAPLLYIDRHLVHEVTSPQAFDGLRTKGRIVRQPSKTFATMDHNVSTQTKDINACGDMARIQMQELIKNCTEFGIQLYDLKHPYQGIVHVIGPEQGITLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQSRSKTMRIDVIGNTASSITAKDIILAIIGKIGTAGGTGHVVEFSGVAIRSLSMEGRMTLCNMAIEMGAKAGLIAPDDITYSYLQNRQFSPKGENWHQALTYWNTLKSDNDAYFDKVITLDVQNIAPQITWGTNPGQVIAVNQPIPSPDSFIDPVERQSAAKALDYMDLKSGIYLTDVTIDKVFIGSCTNSRIEDLRAAAAVAHGRRVANGVHAIVVPGSGPVKMQAELEGLDIIFIEAGFEWRLPGCSMCIAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVFGRFTDIRELI
SIO_010081: TREMTM_RS00300
subclass of: SO_0000673
so part of: TREMTM_RS00300
location: 59644..61044
location: region:59644-61044:1
so has part: feature:59644-61044:1:exon

WP_083172280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59644-61044:1:exon

TREMTM_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: leuD
locus tag: TREMTM_RS00305
old locus tag: TRABTM_A_00690
so part of: sequence
location: 61081..61683
location: region:61081-61683:1
so has part: feature:61081-61683:1:exon
subclass of: SO_0000010

position:61081:1
position: 61081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61683:1
position: 61683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61081-61683:1:exon

TREMTM_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: leuD
locus tag: TREMTM_RS00305
old locus tag: TRABTM_A_00690
EC number: 4.2.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012005193.1
GO component: GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO function: GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase small subunit
translation: MAKFIKHTGIVLPLDVANVDTDAIIPKQFLQKVTRTGFGQHLFNDWRFLDNAGKKINQDFVLNQPRYHGASILLARENFGCGSSREHAPWALIDYGFHALIAPSFADIFYSNSINNQLLPITISENHVNDLFTMVTTQEVITFTVNLEHQQVVAGDKIYFFEIETFSRYCLINGIDSIGLTLRHDEAISKYEMHQLSFLN
SIO_010081: TREMTM_RS00305
subclass of: SO_0000673
so part of: TREMTM_RS00305
location: 61081..61683
location: region:61081-61683:1
so has part: feature:61081-61683:1:exon

WP_083172282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61081-61683:1:exon

TREMTM_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: surA
locus tag: TREMTM_RS00310
old locus tag: TRABTM_A_00700
so part of: sequence
location: 61779..63017
location: region:61779-63017:1
so has part: feature:61779-63017:1:exon
subclass of: SO_0000010

position:61779:1
position: 61779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63017:1
position: 63017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61779-63017:1:exon

TREMTM_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: surA
locus tag: TREMTM_RS00310
old locus tag: TRABTM_A_00700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013024579.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0042277 - peptide binding [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]; GO:0060274 - maintenance of stationary phase [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0050821 - protein stabilization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase SurA
translation: MHILVIFFILLLGTNSAFATLQVLDKVAAVVNKDIVLESDINSMLNMMKYGNKEYNQQFFEEKTLHSKILNRLIMENIILHLAQRAHISISSKYLDHVIRNIASKNYITIDQLRNYLAYDKLDYNTYRAQLSKEILISKVCNSEVRRRITIFPQEIDSIIQQIAIKNRNSTKFNINHILIKLPENPTQAAIFKAETLASYVVKYANNYQQEHKVQIGWKKFEELPALFAVSIQYAKKGNIVGPIRSEVGFHILKINDVRIEHKKITKEEVHIRHIFLRDSIIRNDQCARSKLENISDKISKGSISFEAVAKQQSEDPNSSNKGGDLGWRFTDAFDSNLRDVLMHLHKGEISTPVHSAFGWHIIQLIDIRQVDCTDSFSKENAYRILFKRKFYEEVQNWMQEQHSSSYIKILK
SIO_010081: TREMTM_RS00310
subclass of: SO_0000673
so part of: TREMTM_RS00310
location: 61779..63017
location: region:61779-63017:1
so has part: feature:61779-63017:1:exon

WP_083172284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61779-63017:1:exon

TREMTM_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rsmA
locus tag: TREMTM_RS00315
old locus tag: TRABTM_A_00710
so part of: sequence
location: 63021..63830
location: region:63021-63830:1
so has part: feature:63021-63830:1:exon
subclass of: SO_0000010

position:63021:1
position: 63021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63830:1
position: 63830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63021-63830:1:exon

TREMTM_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rsmA
locus tag: TREMTM_RS00315
old locus tag: TRABTM_A_00710
EC number: 2.1.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410287.1
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MNKCIYQGHLVRQRFGQHFLYDSNIIDAIVTAIAPEPSQAIVEIGPGLGALTIPVVKRVYNMTVIELDRNLVARLANNYFLNYRLNIVQADAMKIDFAKLSAKLGQSLRIFGNLPYNISTQLIFKLFNYTSAIIDMHFMLQKEVVNRMVAVPNSKSYGRLSVMSQYFCKIIPVLEVPPTSFKPEPKVNSMVVKLIPYTKLPFPVIDLNKLTTLTKVAFNQRRKTIRNSLINLFSTQQLEKHGINATLRAENLSIEHYSQLANVLAEKKI
SIO_010081: TREMTM_RS00315
subclass of: SO_0000673
so part of: TREMTM_RS00315
location: 63021..63830
location: region:63021-63830:1
so has part: feature:63021-63830:1:exon

WP_083172285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63021-63830:1:exon

TREMTM_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: carB
locus tag: TREMTM_RS00320
old locus tag: TRABTM_A_00720
so part of: sequence
location: complement(63843..67067)
location: region:63843-67067:-1
so has part: feature:63843-67067:-1:exon
subclass of: SO_0000010

position:63843:-1
position: 63843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67067:-1
position: 67067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63843-67067:-1:exon

TREMTM_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: carB
locus tag: TREMTM_RS00320
old locus tag: TRABTM_A_00720
EC number: 6.3.5.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003829707.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamoyl-phosphate synthase large subunit
translation: MSKRTDIKSILILGSGPIVIGQACEFDYSGTQACKALREEGYRIILVNSNPATIMTDPEMADATYIEPLHWEVIYKIIKKERPDALLPTMGGQTALNCALELARKCILKEFSIEIIGSTVDVIDKAEDRQRFNNAMKKIGLETARSGIAHTIDEALVVAANVGFPCIIRPSFTMGGTGSGIAYNREEFEKICKCGLDLSPTTELLIDESLIGWKEYEMEVVRDRKDNSIIICSIENIDPMGIHTGDSITVAPAQTLTDKEYQIMRSASIAVLREIGVENGGSNVQFAVNPKNGRLVIIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGRRTPASFEPSIDYVVTKIPRFNFEKFSGTNDRLTTQMKSVGEVMAIGRNQQESLQKALRGLELGVSGLDPKVNIDDPEALTILRRELKNAGSERIWYVADAFRAGMSVDVIFKLTNIDRWFLVQIEDLVKLETDVSDRGINALNAAYLRKLKRKGFADARLATLVGLTETEIRKLRESYNLHPVYKRVDTCAAEFATETAYMYSTYDEECESYPCKNIKKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDISDRLYFEPVTLEDVIEIVRIEKPKGVIIQYGGQTPLKLALALEKENVPVIGTCPYSINLAEDRKLFQQVVKRLKLKQPENTTVNNIDSAIEQSSRIGYPLVVRPSYVLGGRAMEIVYDEIDLMRYFNDAVNVSNDAPVLLDRFLDDAIEVDVDAVCDGKNILIGGIMEHIEQAGVHSGDSACSLPTYTLNSDIKNIIRSQVEKIAFELHVIGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVALAKVAARVMVGKSLIEQGIIHEVIPPYYSVKEVVLPFNKFHGVDPILGPEMRSTGEVMGIGRTFAEAFSKAKLGSQSYINKKGRALLSVRDYDKERIVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKIHEGRPHILDRIKNGEYSYIINTTSGRKAIEDSKLIRRSALHYKVYYDTTINGGLATTISFNAKATSQVSSLQEFHSQIIK
SIO_010081: TREMTM_RS00320
subclass of: SO_0000673
so part of: TREMTM_RS00320
location: complement(63843..67067)
location: region:63843-67067:-1
so has part: feature:63843-67067:-1:exon

WP_083172287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63843-67067:-1:exon

TREMTM_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: carA
locus tag: TREMTM_RS00325
old locus tag: TRABTM_A_00730
so part of: sequence
location: complement(67046..68209)
location: region:67046-68209:-1
so has part: feature:67046-68209:-1:exon
subclass of: SO_0000010

position:67046:-1
position: 67046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68209:-1
position: 68209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67046-68209:-1:exon

TREMTM_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: carA
locus tag: TREMTM_RS00325
old locus tag: TRABTM_A_00730
EC number: 6.3.5.5
inference: COORDINATES: similar to AA sequence:RefSeq:NP_459071.1
GO component: GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO function: GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
translation: MNSALLVLEDGTKFHGRSIGAEGTAVGEVVFNTSITGYQEILTDSSYSRQIVTLTYPHIGNTGINEVDNESPHVQAQALIIRDLPIIDSNFRRTLSLSTYLKQQNIIGIADIDTRKLTRLLREKGVQNGCIIADDTQDEQLALHKARKFTGLNGIDLAKEVSTNVPYSWTQGSWTLEKGLPAPSLDLPYHVVVYDYGIKRNIMRMLVDRGCRLTIVPAQTTAETVLKMNPEGIFLSNGPGDPAPCFYAITAIQNLLNLNIPIFGICLGHQLLALASGAKTIKMKFGHHGSNHPVKDLSTDRVIITAQNHGFAVDDKTLPPTIRVTHISLFDGTLQGLHRNDKPAFSFQGHPESSPGPHDAAFLFDYFIKLIKDYRFFRNIKCQNVPI
SIO_010081: TREMTM_RS00325
subclass of: SO_0000673
so part of: TREMTM_RS00325
location: complement(67046..68209)
location: region:67046-68209:-1
so has part: feature:67046-68209:-1:exon

WP_083172289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67046-68209:-1:exon

TREMTM_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: dapB
locus tag: TREMTM_RS00330
old locus tag: TRABTM_A_00740
so part of: sequence
location: complement(68259..69074)
location: region:68259-69074:-1
so has part: feature:68259-69074:-1:exon
subclass of: SO_0000010

position:68259:-1
position: 68259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69074:-1
position: 69074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68259-69074:-1:exon

TREMTM_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: dapB
locus tag: TREMTM_RS00330
old locus tag: TRABTM_A_00740
EC number: 1.17.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011095370.1
GO function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-tetrahydrodipicolinate reductase
translation: MSNKPTRIAVSGVSGKMGRKLIQAVVQSEQVVLGAALSRNCSELYGMDVGKITNMGILGVKIKSDINEIKEDFDIFIDFTRPDTSLTYLDFCRSYQKGIVIGTTGFSHTQKKIINLAAQDTSIVFAANFSVGINLMLKLLEKAAKVIGNDADIEIIEMHHRNKIDAPSGTALVIGETLAGALGRDLDSVAVYCREKNTVEQKEKSIGFSTIRAGDIVGEHTAIFASIGERLEITHKASSRMTFASGAVRAAVWLSSQKKGIFDMTHVLNIK
SIO_010081: TREMTM_RS00330
subclass of: SO_0000673
so part of: TREMTM_RS00330
location: complement(68259..69074)
location: region:68259-69074:-1
so has part: feature:68259-69074:-1:exon

WP_083172628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68259-69074:-1:exon

TREMTM_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: prmC
locus tag: TREMTM_RS00335
old locus tag: TRABTM_A_00750
so part of: sequence
location: complement(69215..70054)
location: region:69215-70054:-1
so has part: feature:69215-70054:-1:exon
subclass of: SO_0000010

position:69215:-1
position: 69215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70054:-1
position: 70054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69215-70054:-1:exon

TREMTM_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: prmC
locus tag: TREMTM_RS00335
old locus tag: TRABTM_A_00750
EC number: 2.1.1.297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008454188.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor N(5)-glutamine methyltransferase
translation: MNWQQWLTQAKKRLLISESPSAKRDAEILLSQVTGANRTKILAFGETLLTDAQNKKLNLLLERRERGEPIAYLTGEREFWSLKLRVTTDTLIPRADTECLVQCTLDIMSPICGAKVLDLGTGSGAIALAIAFERPAWYITGVDRIPSAVSIAQENAKILGINNVHFQESYWFQSVNIHNYNIVVSNPPYIYKNDPYLTQGDVRFEPKSSLVSGKNGFQDLEIICRESIKHLIPGGWLILEHGWRQGAYVRTLLANFGFSRIVTIRDYGDNDRVSKGQKL
SIO_010081: TREMTM_RS00335
subclass of: SO_0000673
so part of: TREMTM_RS00335
location: complement(69215..70054)
location: region:69215-70054:-1
so has part: feature:69215-70054:-1:exon

WP_083172290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69215-70054:-1:exon

TREMTM_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: prfA
locus tag: TREMTM_RS00340
old locus tag: TRABTM_A_00760
so part of: sequence
location: complement(70051..71130)
location: region:70051-71130:-1
so has part: feature:70051-71130:-1:exon
subclass of: SO_0000010

position:70051:-1
position: 70051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71130:-1
position: 71130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70051-71130:-1:exon

TREMTM_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: prfA
locus tag: TREMTM_RS00340
old locus tag: TRABTM_A_00760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012367851.1
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 1
translation: MKSSIIAKLEALQERRKKVEALLSDPNIISDQVRFRVLSKEYAQFLDVTSCFGRWKKVKENINIAERLLNDPEMHDIAHEELQEAILNKKKLEQQLQILLLPKDPDDERGCFIEIRAGTGGDEAALFVGELFRMYSRFAENRKWNIDIVSISDADHGGYKEIIAKISNKGAYGILKFESGGHRVQRIPETESQGRIHTSVCTVVVMPEVPEKELPKINDVDLRIDTFRSSGAGGQHVNTTESAIRITHIPTGLVVECQDERSQHKNKAKALAVLGARLRAIEVNRRQQDKSSTRRKLLGCGDRYDRIRTYNFSQRRVTDHRIYLTLYRLEEIIGGKLDILIQPIMQEYQADQLIALSEQ
SIO_010081: TREMTM_RS00340
subclass of: SO_0000673
so part of: TREMTM_RS00340
location: complement(70051..71130)
location: region:70051-71130:-1
so has part: feature:70051-71130:-1:exon

WP_083172292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70051-71130:-1:exon

TREMTM_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00345
old locus tag: TRABTM_A_00770
so part of: sequence
location: 71374..72318
location: region:71374-72318:1
so has part: feature:71374-72318:1:exon
subclass of: SO_0000010

position:71374:1
position: 71374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72318:1
position: 72318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71374-72318:1:exon

TREMTM_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00345
old locus tag: TRABTM_A_00770
EC number: 2.7.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose-phosphate pyrophosphokinase
translation: MPNIKLFSGNATTELAERIANILDTSLGNATVGRFTDGEINVQINENVRGDDIFIIQSTCAPTNDNFMELVIMVDALRRASAGRITTVIPYFGYARQDRRVRSARVPITAKVVADFLSIINVDRVLTVDLHAEQIHGFFNMPLDNLFGSTILIEDMLQHNLENPMIVSPDIGGVMRARSISKVLNNADMAIVDKYRSRANFSQVMHIIGNVKGRDCVLVDDMIDTGGTLCKAAEVLKEQGAKRVFAYATHPIFSGNAYENIKNSLIETVSVCDTIPLNPAIKALPNVRTLTLSGMLAEAIRRLSNEESISAMFT
SIO_010081: TREMTM_RS00345
subclass of: SO_0000673
so part of: TREMTM_RS00345
location: 71374..72318
location: region:71374-72318:1
so has part: feature:71374-72318:1:exon

WP_156763245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71374-72318:1:exon

TREMTM_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: pth
locus tag: TREMTM_RS00350
old locus tag: TRABTM_A_00780
so part of: sequence
location: 72373..72915
location: region:72373-72915:1
so has part: feature:72373-72915:1:exon
subclass of: SO_0000010

position:72373:1
position: 72373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72915:1
position: 72915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72373-72915:1:exon

TREMTM_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: pth
locus tag: TREMTM_RS00350
old locus tag: TRABTM_A_00780
EC number: 3.1.1.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975647.1
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoacyl-tRNA hydrolase
translation: MKIKLIVGLANPGTKYVATRHNYGSFYIKLLANRYLQTLKENSKFYGYTCKIPILGNNIYLLIPNTFMNLSGKAVAAIANFYHISPEEILVAHDELNMLPGNVKIKINGGHNGHNGLKDIIAHLGGNQFYRLRIGIGHPGNKNEVVYFVLNKPPTEEQKLINSAIDEAVRCTDIIINKIP
SIO_010081: TREMTM_RS00350
subclass of: SO_0000673
so part of: TREMTM_RS00350
location: 72373..72915
location: region:72373-72915:1
so has part: feature:72373-72915:1:exon

WP_083172293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72373-72915:1:exon

TREMTM_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ychF
locus tag: TREMTM_RS00355
old locus tag: TRABTM_A_00790
so part of: sequence
location: 72986..74071
location: region:72986-74071:1
so has part: feature:72986-74071:1:exon
subclass of: SO_0000010

position:72986:1
position: 72986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74071:1
position: 74071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72986-74071:1:exon

TREMTM_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ychF
locus tag: TREMTM_RS00355
old locus tag: TRABTM_A_00790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redox-regulated ATPase YchF
translation: MSVKCGIIGLPNVGKSTLFNALTNASVAAANFPFCTIEPNIGIVPIPDPRIYQLADIVKPQRVVFPKIEFIDIAGLLKGASKGEGLGNKFLSNIRKTEAIAHVVRCFESDNIIHMTGQVDPVKDIDIINTELALFDLDLCTKTIQQVQKRVQIGDKNARIELLVLEKCLPHLKEGGMLRMLNFSRDEKRAIRYIKFLTIKPIMYIANVSENDCNDNVYLSKLCEIASSERSIVIAVCAVVESYISKIKKKNQFLADLGIEEPGLNRIIRAGYNLLNLQTYFTAGVKELRAWTIPVGTTALQASGKIHTDFKKGFIRVKTISFDDFITYKGEQGAKKAGKIRFEGKEYIVMDGDVLNFLFNI
SIO_010081: TREMTM_RS00355
subclass of: SO_0000673
so part of: TREMTM_RS00355
location: 72986..74071
location: region:72986-74071:1
so has part: feature:72986-74071:1:exon

WP_083172632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72986-74071:1:exon

TREMTM_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00360
old locus tag: TRABTM_A_T0100
so part of: sequence
location: 74166..74241
location: region:74166-74241:1
so has part: feature:74166-74241:1:exon
subclass of: SO_0000663

position:74166:1
position: 74166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74241:1
position: 74241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74166-74241:1:exon

TREMTM_RS00360
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00360
old locus tag: TRABTM_A_T0100
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:74199..74201,aa:Asn,seq:gtt)
SIO_010081: TREMTM_RS00360
subclass of: SO_0000673
so part of: TREMTM_RS00360
location: 74166..74241
location: region:74166-74241:1
so has part: feature:74166-74241:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74166-74241:1:exon

TREMTM_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00365
old locus tag: TRABTM_A_T0110
so part of: sequence
location: 74252..74324
location: region:74252-74324:1
so has part: feature:74252-74324:1:exon
subclass of: SO_0000663

position:74252:1
position: 74252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74324:1
position: 74324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74252-74324:1:exon

TREMTM_RS00365
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00365
old locus tag: TRABTM_A_T0110
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:74286..74288,aa:Arg,seq:cct)
SIO_010081: TREMTM_RS00365
subclass of: SO_0000673
so part of: TREMTM_RS00365
location: 74252..74324
location: region:74252-74324:1
so has part: feature:74252-74324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74252-74324:1:exon

TREMTM_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: argS
locus tag: TREMTM_RS00370
old locus tag: TRABTM_A_00800
so part of: sequence
location: complement(74385..76115)
location: region:74385-76115:-1
so has part: feature:74385-76115:-1:exon
subclass of: SO_0000010

position:74385:-1
position: 74385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76115:-1
position: 76115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74385-76115:-1:exon

TREMTM_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: argS
locus tag: TREMTM_RS00370
old locus tag: TRABTM_A_00800
EC number: 6.1.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015870926.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine--tRNA ligase
translation: MNIQLFLSEKIKQALVDAGVHSECKAKVQQSTKKKFGNYQFNGVMEIAKRLGLPSIKLALKVVDLLALDGIACKIEIAGPGFINIFLEPHWLEDNLIAAISSPRLGISRSEPQTIVVDYSAPNVAKEMHVGHMRSTIIGDVSVRTLTFLGHNVIRANHIGDWGTQFGMLIAYLENIKDNCDIKLLNLENFYRAAKLQYDKDPIFAKRAREYVVKLQVGDEYYLQMWRKIVDITIIQNQKIYDLLNVTLTSADIMGESMYNKMLPNIVEDLQKKGLAVESEGSIIVFLNEFKNKKGNPMGVILKKKDGAYLYTTNDIACAKYRYEKLKADRIIYYIDSRQHQHLMQAWTIVRKAGYVPESIPIEHHMFGMMLGKDGKPFKTRDGGTVKLTKLLSEAILRARSIILAKNPDINTEYLDRLSRVLGIGAVKYADLSKNRITDYVFDWDKMLTFEGNTAPYMQYAYTRIVSIFKRSGQDEQQIQLNGNFKLKSEQEIQLAVRILQLKETILIVAKEGTPHVLCAYLYNLSVLFSAFYETCPILNAENETLRQSRLKLALITARTIKQGLELLGIETVEIM
SIO_010081: TREMTM_RS00370
subclass of: SO_0000673
so part of: TREMTM_RS00370
location: complement(74385..76115)
location: region:74385-76115:-1
so has part: feature:74385-76115:-1:exon

WP_083172634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74385-76115:-1:exon

TREMTM_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: aspS
locus tag: TREMTM_RS00375
old locus tag: TRABTM_A_00810
so part of: sequence
location: 76359..78071
location: region:76359-78071:1
so has part: feature:76359-78071:1:exon
subclass of: SO_0000010

position:76359:1
position: 76359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78071:1
position: 78071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76359-78071:1:exon

TREMTM_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: aspS
locus tag: TREMTM_RS00375
old locus tag: TRABTM_A_00810
EC number: 6.1.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010275907.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate--tRNA ligase
translation: MRTIYCGQLNMSHVSQKVTLCGWVNRRRDLGGLIFIDLRDLEGLVQVFFNPDLQDTFALAAEIRNEFCLQITGIVRSRPKNQVNNDLATGAIEIMATEFKILNRSEYLPIDNNQNNSEEQRLKFRYLDLRRHIMAQRLKTRSRISSFVRRFMEKQGFIDIETPMLTKATPEGARDYLVPSRLHKGKFYALPQSPQLFKQLLMISGFDRYYQIVKCFRDEDLRADRQSEFTQIDVEMSFMTATQVREIMEQLIRDLWLNITGIDLFVFPQMTYAEAMRRFGSDKPDLRNPMELVDVADLVKDTKLNIFSIPANDRKCRVTALRVPGGAQLSSKQIEEYNRYIQSYYGAKSLVWIKLIYCNDSVVVRSPLVKLLEQQVIKQIIARTGANDGDIIFLSADNLNVVTNSLGALRIKLGIDLQLIDTARWAPVWIVDFPMFKEDANGKLTAMHHPFTAPKNIDINTLNACPKEAIADAYDLVINGYEVGGGSVRIHSIAMQKNVFTILGIGEHEQYEKFGFLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRDVIAFPKTTTAADLMTEAPSF
SIO_010081: TREMTM_RS00375
subclass of: SO_0000673
so part of: TREMTM_RS00375
location: 76359..78071
location: region:76359-78071:1
so has part: feature:76359-78071:1:exon

WP_083172295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76359-78071:1:exon

TREMTM_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ruvC
locus tag: TREMTM_RS00380
old locus tag: TRABTM_A_00820
so part of: sequence
location: 78598..79083
location: region:78598-79083:1
so has part: feature:78598-79083:1:exon
subclass of: SO_0000010

position:78598:1
position: 78598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79083:1
position: 79083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78598-79083:1:exon

TREMTM_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ruvC
locus tag: TREMTM_RS00380
old locus tag: TRABTM_A_00820
EC number: 3.1.21.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007677938.1
GO function: GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: crossover junction endodeoxyribonuclease RuvC
translation: MTVILGIDPGSRITGYGIVSNNGHKLNYLGSGCIQTNVKYFPGRLKLIYAGISKIITQFQPNCIAVEQVFIAKNADSALKLGHARGVVIVAAINLDLPIFEYTARQVKQTVVGIGSADKIQVQHMVRSLLNLSYNNIQADSADALAIAITHCYFSQNHYSR
SIO_010081: TREMTM_RS00380
subclass of: SO_0000673
so part of: TREMTM_RS00380
location: 78598..79083
location: region:78598-79083:1
so has part: feature:78598-79083:1:exon

WP_083172297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78598-79083:1:exon

TREMTM_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ruvA
locus tag: TREMTM_RS00385
old locus tag: TRABTM_A_00830
so part of: sequence
location: 79136..79735
location: region:79136-79735:1
so has part: feature:79136-79735:1:exon
subclass of: SO_0000010

position:79136:1
position: 79136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79735:1
position: 79735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79136-79735:1:exon

TREMTM_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ruvA
locus tag: TREMTM_RS00385
old locus tag: TRABTM_A_00830
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006709047.1
GO component: GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO function: GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Holliday junction branch migration protein RuvA
translation: MIGRLRGIILEKQPPQVMLETNGIGYEVQLPMTCFYALPKIGQEAILFTHLVMRENSQMIFGFIYKHERVLFRELIKVNGVGPKLALAILSGMSAQQFVSAVERREINALVKLPGVGKKTAERLVVEIKDRLKNLSGERLLSTSISILNEDNKNTESEAIAALVSLGYKPHEASLMVGKVASDDADCEMIIRNALRSAL
SIO_010081: TREMTM_RS00385
subclass of: SO_0000673
so part of: TREMTM_RS00385
location: 79136..79735
location: region:79136-79735:1
so has part: feature:79136-79735:1:exon

WP_083172298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79136-79735:1:exon

TREMTM_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ruvB
locus tag: TREMTM_RS00390
old locus tag: TRABTM_A_00840
so part of: sequence
location: 79744..80748
location: region:79744-80748:1
so has part: feature:79744-80748:1:exon
subclass of: SO_0000010

position:79744:1
position: 79744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80748:1
position: 80748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79744-80748:1:exon

TREMTM_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ruvB
locus tag: TREMTM_RS00390
old locus tag: TRABTM_A_00840
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004715228.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Holliday junction branch migration DNA helicase RuvB
translation: MIDNDRIISGVAVTGEEVIDHAIRPKKLEEYIGQQQVCEQMNIFIQAAKRRGEALDHVLIWGPPGLGKTTLANIVANELEVNLRITSGPVLEKAGDLAAMLTNLEINDVLFIDEIHRLSPVIEEILYPAMEDYKLDIMIGEGPAARSIKVNLPPFTLVGATTRAGLLTSPLRDRFGIVQRLEFYQIRDLQHIVNRSANCMKLNITEKGALEIARRSRGTPRIANRLLRRVRDFAEVLTVGCITDDVAMNALNMLNVDPHGFDLMDRKLIMAVIDKFIGGPVGLDNLAAAIGEDRETIEDVLEPFLIQQGFIQRTPRGRIATVHAYRHFKKGYDK
SIO_010081: TREMTM_RS00390
subclass of: SO_0000673
so part of: TREMTM_RS00390
location: 79744..80748
location: region:79744-80748:1
so has part: feature:79744-80748:1:exon

WP_083172300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79744-80748:1:exon

TREMTM_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpmB
locus tag: TREMTM_RS00395
old locus tag: TRABTM_A_00850
so part of: sequence
location: 81017..81244
location: region:81017-81244:1
so has part: feature:81017-81244:1:exon
subclass of: SO_0000010

position:81017:1
position: 81017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81244:1
position: 81244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81017-81244:1:exon

TREMTM_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpmB
locus tag: TREMTM_RS00395
old locus tag: TRABTM_A_00850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975469.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L28
translation: MSRVCQVTGKITMNGNNRSHAMNATKRRFFPNLHYHRFWVDSKKIFITLRVSTKGIRIIDKKGIEKVLAENNILR
SIO_010081: TREMTM_RS00395
subclass of: SO_0000673
so part of: TREMTM_RS00395
location: 81017..81244
location: region:81017-81244:1
so has part: feature:81017-81244:1:exon

WP_083172301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81017-81244:1:exon

TREMTM_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpmG
locus tag: TREMTM_RS00400
old locus tag: TRABTM_A_00860
so part of: sequence
location: 81255..81422
location: region:81255-81422:1
so has part: feature:81255-81422:1:exon
subclass of: SO_0000010

position:81255:1
position: 81255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81422:1
position: 81422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81255-81422:1:exon

TREMTM_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpmG
locus tag: TREMTM_RS00400
old locus tag: TRABTM_A_00860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011520372.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L33
translation: MAKSVCEKIKLVSSAGTGHFYTTTKNKRNKSEKIEFKKFDPVVRKHVLYKEAKIK
SIO_010081: TREMTM_RS00400
subclass of: SO_0000673
so part of: TREMTM_RS00400
location: 81255..81422
location: region:81255-81422:1
so has part: feature:81255-81422:1:exon

WP_083172303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81255-81422:1:exon

TREMTM_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: mutM
locus tag: TREMTM_RS00405
old locus tag: TRABTM_A_00870
so part of: sequence
location: 81514..82323
location: region:81514-82323:1
so has part: feature:81514-82323:1:exon
subclass of: SO_0000010

position:81514:1
position: 81514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82323:1
position: 82323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81514-82323:1:exon

TREMTM_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: mutM
locus tag: TREMTM_RS00405
old locus tag: TRABTM_A_00870
EC number: 3.2.2.23
EC number: 4.2.99.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004710476.1
GO function: GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
translation: MPELPEVETCRLGIEPWLSGHTIIRVEVHNARLRWPVDKEILLLKKKQVLSVQRRAKYLLLELNEGWIIIHLGMSGCLRVMLYPQFPNKHDHIDLILNNGFMIRYTDPRRFGAWLWSDNIQKSSLLDHIGPEPLSDNFNNRWLYEKLRNKRTPIKTLLTDNKIVAGIGNIYASESLFIAGILPGRAASSLSEKDAETLVQSIKKVLLRSIHKGGTTLRNFLQSNGNPGNFIHELHVYGRKNKKCRLCGTLIQIVKHKQRSTFFCPKCQH
SIO_010081: TREMTM_RS00405
subclass of: SO_0000673
so part of: TREMTM_RS00405
location: 81514..82323
location: region:81514-82323:1
so has part: feature:81514-82323:1:exon

WP_083172304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81514-82323:1:exon

TREMTM_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: endA
locus tag: TREMTM_RS00410
old locus tag: TRABTM_A_00880
so part of: sequence
location: complement(82430..83125)
location: region:82430-83125:-1
so has part: feature:82430-83125:-1:exon
subclass of: SO_0000010

position:82430:-1
position: 82430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83125:-1
position: 83125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82430-83125:-1:exon

TREMTM_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: endA
locus tag: TREMTM_RS00410
old locus tag: TRABTM_A_00880
EC number: 3.1.21.1
inference: COORDINATES: protein motif:HMM:NF011716.0
GO function: GO:0004518 - nuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: deoxyribonuclease I
translation: MCSLVIYFFYTTDKVYNIENFNQAKSVALKINRDAPGTFYCGCPITWYGKKGTPDLSTCGYQVRKSKLLAKRIEWEHVMPAWEFGHQRQCWKKGGRKNCAKDFAYRKIENDLHNLQPVIGEVNKDRGNYQYSQWYSGKSQYGRCQMKIDFKNKQIDPPTRVRGVIARTYFYMRDHYKLRLSRAQTKLFELWNHTYPVTEWECKRNKRIAAIQGNPNPYIQLACNSKIKNLN
SIO_010081: TREMTM_RS00410
subclass of: SO_0000673
so part of: TREMTM_RS00410
location: complement(82430..83125)
location: region:82430-83125:-1
so has part: feature:82430-83125:-1:exon

WP_083172306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82430-83125:-1:exon

TREMTM_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00415
old locus tag: TRABTM_A_00900
so part of: sequence
location: complement(83329..83931)
location: region:83329-83931:-1
so has part: feature:83329-83931:-1:exon
subclass of: SO_0000010

position:83329:-1
position: 83329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83931:-1
position: 83931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83329-83931:-1:exon

TREMTM_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00415
old locus tag: TRABTM_A_00900
EC number: 1.11.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005225393.1
GO function: GO:0051920 - peroxiredoxin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin C
translation: MILVTRQAPDFTASAVLGNGKIVTNFNLKSQIKGKTAVLFFWPMDFTFVCPSELIAFDKRYVDFKKREVEIIGVSFDSEFVHNAWRKLSIDKGGIGPVQYPMVADIKREIIKSYNIEHPDIGIALRGSFLIDKNGIIRHQVVNDLPLGRNIDEMIRMVDALHFNAEHGQVCPAQWKKGQEGMIPSPEGVSAYLYKNLNKL
SIO_010081: TREMTM_RS00415
subclass of: SO_0000673
so part of: TREMTM_RS00415
location: complement(83329..83931)
location: region:83329-83931:-1
so has part: feature:83329-83931:-1:exon

WP_083172308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83329-83931:-1:exon

TREMTM_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ribE
locus tag: TREMTM_RS00420
old locus tag: TRABTM_A_00910
so part of: sequence
location: 84278..84748
location: region:84278-84748:1
so has part: feature:84278-84748:1:exon
subclass of: SO_0000010

position:84278:1
position: 84278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84748:1
position: 84748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84278-84748:1:exon

TREMTM_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ribE
locus tag: TREMTM_RS00420
old locus tag: TRABTM_A_00910
EC number: 2.5.1.78
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006657188.1
GO component: GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6,7-dimethyl-8-ribityllumazine synthase
translation: MKIIEGIITAPNARIAIAIARFNHFINESLLLGAVDALKRIGQVHNDNITVIWVPGAYELPLAVSALSVKKYDAIIALGTVIRGCTNHFEFIASECSSGIAAVAARTTIPVSFGVLTTDSIEQAIERAGTKAGNKGAEAAITALEMINVLQAIKAQ
SIO_010081: TREMTM_RS00420
subclass of: SO_0000673
so part of: TREMTM_RS00420
location: 84278..84748
location: region:84278-84748:1
so has part: feature:84278-84748:1:exon

WP_083172310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84278-84748:1:exon

TREMTM_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: nusB
locus tag: TREMTM_RS00425
old locus tag: TRABTM_A_00920
so part of: sequence
location: 84762..85181
location: region:84762-85181:1
so has part: feature:84762-85181:1:exon
subclass of: SO_0000010

position:84762:1
position: 84762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85181:1
position: 85181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84762-85181:1:exon

TREMTM_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: nusB
locus tag: TREMTM_RS00425
old locus tag: TRABTM_A_00920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004949263.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription antitermination factor NusB
translation: MKSTFRRRARECAVQALYSWQVSHNSILDIEKQFLTEWNTSYRGIAYFRKIYAGTATNAKEIDNIMAPYLLRNLKEISNIERAVLRIAIFELIKCQDVPYRVAINEAIELAKTFGAENSHKFINGVLDKVAPKIRLNKN
SIO_010081: TREMTM_RS00425
subclass of: SO_0000673
so part of: TREMTM_RS00425
location: 84762..85181
location: region:84762-85181:1
so has part: feature:84762-85181:1:exon

WP_083172312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84762-85181:1:exon

TREMTM_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: thiI
locus tag: TREMTM_RS00430
old locus tag: TRABTM_A_00930
so part of: sequence
location: 85334..86818
location: region:85334-86818:1
so has part: feature:85334-86818:1:exon
subclass of: SO_0000010

position:85334:1
position: 85334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86818:1
position: 86818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85334-86818:1:exon

TREMTM_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: thiI
locus tag: TREMTM_RS00430
old locus tag: TRABTM_A_00930
EC number: 2.8.1.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015683720.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uracil 4-sulfurtransferase ThiI
translation: MKFIIKIFPEIMIKSKSVRLLFIKILTGNIRNILKNYYESVAVVRYWDRIKVCIKDEKRSTQFTSVLTSIPGIHHVEIVEESTWKDMHDIYLQTLIRYRNLLIGKSFCVRVKRRGTQYFTSQDVERYIGSGLSKNINNTEVNLKKPDKKILLEIDNNRLIFIYERFEGIGGFPIGTQENVLSLISGGFDSAVSSYMMMRRGCRVNYCFFNIGGNTHEIGVRQAAYHLWYRFGFSHEVRFISIDFAPILNEILMKVNCTQMGIVLKRMMVRTASTIAERYGIQALVMGESLGQVSSQTLTNMRLIDNVSNILILRPLISHDKEHIIKIARHIGTEEYAKKMPEYCGVFSKNPTVRAVKKYIEQEEDKFNLEILNTALTKAQVLNIRDILDNKNTVPNFKEIETIAELGKEDIVLDIRLLDEQEVSPLTLNNIEVHKIPFYKLHSQFCKLDQSKSYLLYCSSGFMSRLQAIYLYEQGFHNVKIYCPINKKNKKKLL
SIO_010081: TREMTM_RS00430
subclass of: SO_0000673
so part of: TREMTM_RS00430
location: 85334..86818
location: region:85334-86818:1
so has part: feature:85334-86818:1:exon

WP_083172314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85334-86818:1:exon

TREMTM_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: aroQ
locus tag: TREMTM_RS00435
old locus tag: TRABTM_A_00940
so part of: sequence
location: 87204..87659
location: region:87204-87659:1
so has part: feature:87204-87659:1:exon
subclass of: SO_0000010

position:87204:1
position: 87204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87659:1
position: 87659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87204-87659:1:exon

TREMTM_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: aroQ
locus tag: TREMTM_RS00435
old locus tag: TRABTM_A_00940
EC number: 4.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010300311.1
GO function: GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II 3-dehydroquinate dehydratase
translation: MTNKFHILFLNGPNLNLLGIREPNKYGNINITDIISDLSTLASSLGAEISHFQSNAEHAIIDYIHHARGNTDFIVINPAAFTHTSIAIRDALLAVNIPFIEIHLSNVHAREPFRYHSYFSDIAVGVICGLGADGYHFALQTAIKRLSTTSN
SIO_010081: TREMTM_RS00435
subclass of: SO_0000673
so part of: TREMTM_RS00435
location: 87204..87659
location: region:87204-87659:1
so has part: feature:87204-87659:1:exon

WP_083172636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87204-87659:1:exon

TREMTM_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsF
locus tag: TREMTM_RS00440
old locus tag: TRABTM_A_00950
so part of: sequence
location: 88524..88916
location: region:88524-88916:1
so has part: feature:88524-88916:1:exon
subclass of: SO_0000010

position:88524:1
position: 88524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88916:1
position: 88916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88524-88916:1:exon

TREMTM_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsF
locus tag: TREMTM_RS00440
old locus tag: TRABTM_A_00950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S6
translation: MRHYEVIFMIHPDHSEQVANMIERYSSIITSAEGHIHRIEDWGRRQLAYPINKLHKAYYVLLNVEAPQKVIDKLETAFNFNDVVIRSIIMRVKQPVTEVSPMFKAKDEYRDRSENLNSESNENSDTLDYE
SIO_010081: TREMTM_RS00440
subclass of: SO_0000673
so part of: TREMTM_RS00440
location: 88524..88916
location: region:88524-88916:1
so has part: feature:88524-88916:1:exon

WP_083172315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88524-88916:1:exon

TREMTM_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsR
locus tag: TREMTM_RS00445
old locus tag: TRABTM_A_00960
so part of: sequence
location: 89183..89413
location: region:89183-89413:1
so has part: feature:89183-89413:1:exon
subclass of: SO_0000010

position:89183:1
position: 89183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89413:1
position: 89413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89183-89413:1:exon

TREMTM_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsR
locus tag: TREMTM_RS00445
old locus tag: TRABTM_A_00960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S18
translation: MTRYLRRRKFCRFTAEEIVEIDYKDISMLKNYITENGKIVPSRITGTSAKYQRQLARAIKRARYLSLLPYTDCHKF
SIO_010081: TREMTM_RS00445
subclass of: SO_0000673
so part of: TREMTM_RS00445
location: 89183..89413
location: region:89183-89413:1
so has part: feature:89183-89413:1:exon

WP_083172317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89183-89413:1:exon

TREMTM_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplI
locus tag: TREMTM_RS00450
old locus tag: TRABTM_A_00970
so part of: sequence
location: 89431..89880
location: region:89431-89880:1
so has part: feature:89431-89880:1:exon
subclass of: SO_0000010

position:89431:1
position: 89431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89880:1
position: 89880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89431-89880:1:exon

TREMTM_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplI
locus tag: TREMTM_RS00450
old locus tag: TRABTM_A_00970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004699845.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L9
translation: MQVILMVKVTNLGGVGEQVKVKTGYARNYLFPKGKAVPATKKNLESFDARRTELEAKMKFILAANEERIVKIKKLNSITILAKVGNKGKLFGSIGTRDIATAISNAGIKIAKNDVRLPNGVLRYVGRHEVIIHIGEIFTKFNVVLVPEA
SIO_010081: TREMTM_RS00450
subclass of: SO_0000673
so part of: TREMTM_RS00450
location: 89431..89880
location: region:89431-89880:1
so has part: feature:89431-89880:1:exon

WP_083172319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89431-89880:1:exon

TREMTM_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00455
old locus tag: TRABTM_A_T0120
so part of: sequence
location: complement(89889..89965)
location: region:89889-89965:-1
so has part: feature:89889-89965:-1:exon
subclass of: SO_0000663

position:89889:-1
position: 89889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89965:-1
position: 89965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89889-89965:-1:exon

TREMTM_RS00455
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00455
old locus tag: TRABTM_A_T0120
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(89929..89931),aa:Pro,seq:tgg)
SIO_010081: TREMTM_RS00455
subclass of: SO_0000673
so part of: TREMTM_RS00455
location: complement(89889..89965)
location: region:89889-89965:-1
so has part: feature:89889-89965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89889-89965:-1:exon

TREMTM_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00460
old locus tag: TRABTM_A_T0130
so part of: sequence
location: complement(89978..90061)
location: region:89978-90061:-1
so has part: feature:89978-90061:-1:exon
subclass of: SO_0000663

position:89978:-1
position: 89978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90061:-1
position: 90061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89978-90061:-1:exon

TREMTM_RS00460
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00460
old locus tag: TRABTM_A_T0130
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(90025..90027),aa:Leu,seq:cag)
SIO_010081: TREMTM_RS00460
subclass of: SO_0000673
so part of: TREMTM_RS00460
location: complement(89978..90061)
location: region:89978-90061:-1
so has part: feature:89978-90061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89978-90061:-1:exon

TREMTM_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00465
old locus tag: TRABTM_A_T0140
so part of: sequence
location: complement(90068..90140)
location: region:90068-90140:-1
so has part: feature:90068-90140:-1:exon
subclass of: SO_0000663

position:90068:-1
position: 90068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90140:-1
position: 90140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90068-90140:-1:exon

TREMTM_RS00465
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00465
old locus tag: TRABTM_A_T0140
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(90105..90107),aa:His,seq:gtg)
SIO_010081: TREMTM_RS00465
subclass of: SO_0000673
so part of: TREMTM_RS00465
location: complement(90068..90140)
location: region:90068-90140:-1
so has part: feature:90068-90140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90068-90140:-1:exon

TREMTM_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00470
old locus tag: TRABTM_A_T0150
so part of: sequence
location: complement(90150..90223)
location: region:90150-90223:-1
so has part: feature:90150-90223:-1:exon
subclass of: SO_0000663

position:90150:-1
position: 90150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90223:-1
position: 90223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90150-90223:-1:exon

TREMTM_RS00470
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00470
old locus tag: TRABTM_A_T0150
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(90187..90189),aa:Arg,seq:ccg)
SIO_010081: TREMTM_RS00470
subclass of: SO_0000673
so part of: TREMTM_RS00470
location: complement(90150..90223)
location: region:90150-90223:-1
so has part: feature:90150-90223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90150-90223:-1:exon

TREMTM_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rho
locus tag: TREMTM_RS00475
old locus tag: TRABTM_A_00980
so part of: sequence
location: complement(90343..91602)
location: region:90343-91602:-1
so has part: feature:90343-91602:-1:exon
subclass of: SO_0000010

position:90343:-1
position: 90343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91602:-1
position: 91602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90343-91602:-1:exon

TREMTM_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rho
locus tag: TREMTM_RS00475
old locus tag: TRABTM_A_00980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1
GO function: GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MNLTELKNTPVSELVLLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGILEILQDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNYDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARILDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSINYNHSDCVLIVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIVLLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNMEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSLKIAEKRDFPAIDYNRSGTRKEELLTNQEELQKMWILRKIIHPMNEIDAMEFLINKLAMTKTNDEFFDMMKRS
SIO_010081: TREMTM_RS00475
subclass of: SO_0000673
so part of: TREMTM_RS00475
location: complement(90343..91602)
location: region:90343-91602:-1
so has part: feature:90343-91602:-1:exon

WP_083172320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90343-91602:-1:exon

TREMTM_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00480
old locus tag: TRABTM_A_00981
pseudo: true
so part of: sequence
location: complement(91890..92177)
location: region:91890-92177:-1
so has part: feature:91890-92177:-1:exon
subclass of: SO_0000010

position:91890:-1
position: 91890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92177:-1
position: 92177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91890-92177:-1:exon

TREMTM_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00480
old locus tag: TRABTM_A_00981
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975457.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: thioredoxin domain-containing protein
SIO_010081: TREMTM_RS00480
subclass of: SO_0000673
so part of: TREMTM_RS00480
location: complement(91890..92177)
location: region:91890-92177:-1
so has part: feature:91890-92177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91890-92177:-1:exon

TREMTM_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00485
old locus tag: TRABTM_A_01000
so part of: sequence
location: 92911..93474
location: region:92911-93474:1
so has part: feature:92911-93474:1:exon
subclass of: SO_0000010

position:92911:1
position: 92911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93474:1
position: 93474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92911-93474:1:exon

TREMTM_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00485
old locus tag: TRABTM_A_01000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012442535.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqgE/AlgH family protein
translation: MNLQNHFLIAMPSLQDPLFKRSVVYICEHNSKGAMGIVINKPIEQFSIENVLYKLKMISSGKDLSILLDNPVFYGGPLAEDRGFILHTPQDGFGSSIGISEKTMMTTSKDVLETIGTDKQPEYLLVALGYSGWDQGQLESELLENNWLTTPANNKILFHTPIATRWSEAAKTLGIDIYSITTQVGHA
SIO_010081: TREMTM_RS00485
subclass of: SO_0000673
so part of: TREMTM_RS00485
location: 92911..93474
location: region:92911-93474:1
so has part: feature:92911-93474:1:exon

WP_083172322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92911-93474:1:exon

TREMTM_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ruvX
locus tag: TREMTM_RS00490
old locus tag: TRABTM_A_01010
so part of: sequence
location: 93474..93896
location: region:93474-93896:1
so has part: feature:93474-93896:1:exon
subclass of: SO_0000010

position:93896:1
position: 93896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93474-93896:1:exon

TREMTM_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ruvX
locus tag: TREMTM_RS00490
old locus tag: TRABTM_A_01010
EC number: 3.1.21.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007370208.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Holliday junction resolvase RuvX
translation: MDIYGCIIAFDFGTRSIGVAVGQHITCTAQPLTSFKARDGVPNWKDIEKLLKEWKPHTVVVGLPLNMDGSNQPLTAYTHKFANLLHSFFSVHVVLHDERLSTVEARINLFNCGGYRALDKGNVDASSAVIILESWLELSA
SIO_010081: TREMTM_RS00490
subclass of: SO_0000673
so part of: TREMTM_RS00490
location: 93474..93896
location: region:93474-93896:1
so has part: feature:93474-93896:1:exon

WP_083172324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93474-93896:1:exon

TREMTM_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00495
old locus tag: TRABTM_A_01020
so part of: sequence
location: 93982..94545
location: region:93982-94545:1
so has part: feature:93982-94545:1:exon
subclass of: SO_0000010

position:93982:1
position: 93982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94545:1
position: 94545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93982-94545:1:exon

TREMTM_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00495
old locus tag: TRABTM_A_01020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014605111.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YggT family protein
translation: MLIIFFVKTLINLYIMMMLLRFWMQLTHCDFSNTFSQLIVKITQPVIGRLNGIFPSLGNFDSASLIVALTFAMIKLPILTLIDMHVFIYNHIYLLVGLLALLKIAGELVFWIVFIRTLLSWRSHECSHKCSHMDVIIYKLSELLMHPIRLILPDMGGIDFSAMIVIVILYVLNHISAELFSEIWYRL
SIO_010081: TREMTM_RS00495
subclass of: SO_0000673
so part of: TREMTM_RS00495
location: 93982..94545
location: region:93982-94545:1
so has part: feature:93982-94545:1:exon

WP_083172325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93982-94545:1:exon

TREMTM_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: suhB
locus tag: TREMTM_RS00500
old locus tag: TRABTM_A_01030
so part of: sequence
location: complement(94802..95578)
location: region:94802-95578:-1
so has part: feature:94802-95578:-1:exon
subclass of: SO_0000010

position:94802:-1
position: 94802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95578:-1
position: 95578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94802-95578:-1:exon

TREMTM_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: suhB
locus tag: TREMTM_RS00500
old locus tag: TRABTM_A_01030
EC number: 3.1.3.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411596.1
GO function: GO:0008934 - inositol monophosphate 1-phosphatase activity [Evidence IEA]
GO process: GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]; GO:0046854 - phosphatidylinositol phosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inositol-1-monophosphatase
translation: MHPMLNIAISAARVAGNLIAKFYETPDNDEVNNCFVKKIKKKAEYLIVEVIRKFYPHHTILSEELGELYYCKNTDVQWIITPLSGTNNFIKRFPHFSVSIAVIIKKHTKIAVIYDPIRNELFTAYSGKGTQLNGYRLRGSTARNLNGTILVTGFPFNHKNYNLMNKLLIQCADLRRTGSTALDLAYVAAGRVDGFLEMGLKKWDFTGGELLVRESGSLVTDFTGGPDYIFSGNLIAGNYRIIKAIFNTMHKELMQCVE
SIO_010081: TREMTM_RS00500
subclass of: SO_0000673
so part of: TREMTM_RS00500
location: complement(94802..95578)
location: region:94802-95578:-1
so has part: feature:94802-95578:-1:exon

WP_083172638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94802-95578:-1:exon

TREMTM_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00505
old locus tag: TRABTM_A_01040
so part of: sequence
location: 95920..97077
location: region:95920-97077:1
so has part: feature:95920-97077:1:exon
subclass of: SO_0000010

position:95920:1
position: 95920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97077:1
position: 97077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95920-97077:1:exon

TREMTM_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00505
old locus tag: TRABTM_A_01040
EC number: 2.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975652.1
GO function: GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0044571 - [2Fe-2S] cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IscS subfamily cysteine desulfurase
translation: MKLPIYLDYSSTTPVDPLVADKMMQYLTFDGIFGNPSSRFHCYGWQAEEAVDIARNHIAVLVGADTREIIFTSGATESVNLAIKGAAYTNSVKGRHIITAVTEHKAVIDTCQQLETEGFTVTWLMPSKDGIISSKQLSNALRDDTIIVSLMHVNNETGMIHDIASFGEVCRSHGALYHVDATQSVGKLPIDLTLLPVDLMSFSAHKLYGPKGIGALFVRRDPRVCIKAQINGGGHELGIRSGTLPVHQIVGMGEAYSLASQEIKNKMPFLMALRDQLWKGMQQIDGVSVNGDLQQGIATILNLSFRDINGELLIMKLKNLAVSTGSACTSTSIEPSYVLRAMGLDDKLAHSSIRFSLGKFTTHEEINYAINQTIIAVSQLRKKND
SIO_010081: TREMTM_RS00505
subclass of: SO_0000673
so part of: TREMTM_RS00505
location: 95920..97077
location: region:95920-97077:1
so has part: feature:95920-97077:1:exon

WP_083172327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95920-97077:1:exon

TREMTM_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: hisS
locus tag: TREMTM_RS00510
old locus tag: TRABTM_A_01050
so part of: sequence
location: 97210..98490
location: region:97210-98490:1
so has part: feature:97210-98490:1:exon
subclass of: SO_0000010

position:97210:1
position: 97210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98490:1
position: 98490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97210-98490:1:exon

TREMTM_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: hisS
locus tag: TREMTM_RS00510
old locus tag: TRABTM_A_01050
EC number: 6.1.1.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015580451.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine--tRNA ligase
translation: MANNIEAIRGMKDYLPEEIVLWQRIEKTLKKVLDGYGYSEIRLPIVEHTLLFQRAIGKVTDVVEKEMYSFDDRKGDNLTLRPEGTAGCVRAGIKHSLIYKKEQRLWYIGPMFRYERPQKGRYRQFYQIGVEVFGQEGPDVDAELILIIARWWRELGISHHVSLEINSLGSMEARARYRNALVAFLVQNKEHLNENCRRRIYTNPMRVLDTKNSDIQALLKKAPVITDYLDDDSRFHFYSLCELLDLSCIPYRVNPHLVRGLDYYNRTVFEWITTFLGSQSTVCGGGHYDSLVEQLGGRATPAVGFAMGLERLVLLMQTVNPYFAVSNRIDAYLVVAGDKAKREALQLAEQLRDALPSLRMMTNYGVGSFKKQLAIADKQGARIAIIIGENETSTLQVIIKDLITGKQEKLARLDLVSRLISFLEIK
SIO_010081: TREMTM_RS00510
subclass of: SO_0000673
so part of: TREMTM_RS00510
location: 97210..98490
location: region:97210-98490:1
so has part: feature:97210-98490:1:exon

WP_083172328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97210-98490:1:exon

TREMTM_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: der
locus tag: TREMTM_RS00515
old locus tag: TRABTM_A_01060
so part of: sequence
location: 99107..100480
location: region:99107-100480:1
so has part: feature:99107-100480:1:exon
subclass of: SO_0000010

position:99107:1
position: 99107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100480:1
position: 100480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99107-100480:1:exon

TREMTM_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: der
locus tag: TREMTM_RS00515
old locus tag: TRABTM_A_01060
EC number: 3.6.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411580.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTPase Der
translation: MIPVVTIVGRPNVGKSTLFNQLTRTRDALVTDFQGLTRDRKYGRAKWSGHEFIVIDTGGIDNTKRGIETIITGQSLLAIKEADIVLFLVDGQSGIMEADQNIAKHLRSCRKKTVIVVNKTERLSTDSTCYFCNLGIDNIVSISAKYGRGFNNLIEHILLVSNNLPGADNNYDKADILALAPDAKEKKIEQSLLPIKIAIVGCPNVGKSTLINCLLGQKRVVVYDNPGTTRDSIYIPKVRNKREYILIDTAGVRKRSKVTDKVEKFSIIKTLQAIEYANVVLLVIDAYKGISDQDLYLLSFILKSGRSLVIAVNKFDDLYSPKRNEIKKTLNHHLKFLSFARVHFISALHNRGISNIYKSVNEAYQCATIRFSTALLTRIMHNAVNEYQLPFSDRVKLKYAHAGGYNPLILVMHGTKVKNIPNTYKRYLINYFQRSLEIIGTQIRIHFNESVNHYVVK
SIO_010081: TREMTM_RS00515
subclass of: SO_0000673
so part of: TREMTM_RS00515
location: 99107..100480
location: region:99107-100480:1
so has part: feature:99107-100480:1:exon

WP_083172330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99107-100480:1:exon

TREMTM_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: dnaB
locus tag: TREMTM_RS00520
old locus tag: TRABTM_A_01070
so part of: sequence
location: complement(100508..101905)
location: region:100508-101905:-1
so has part: feature:100508-101905:-1:exon
subclass of: SO_0000010

position:100508:-1
position: 100508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101905:-1
position: 101905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100508-101905:-1:exon

TREMTM_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: dnaB
locus tag: TREMTM_RS00520
old locus tag: TRABTM_A_01070
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014889070.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MSEKKNKANFISDHNVENIKIPPHSLEAEQSVLGGLMLDNERWDNVADRLTCNDFFNHQHRLIFIEMQRLLELGKPIDLITLSESMEQKGNLNAVGGFAYLAELSKNTPSAANISAYADIVRERAILRELISVAHEIADFGYNPQGRSSEDLLDIAESRVFKIAENRANKDEGTKNIDLILEDLVNRIEQLYHKPHNGVTGVSSGYLDLDKKTSGLQKSDLIIIAARPSMGKTTFAMNLCENAAMFEDKPVIIFSLEMPGEQIMMRMLASMSRVDQTRIRTGQLDDNDWARISSTMGILLEKCNIYIDDSSGLTPMEIRSRARRVFRENNGLSLIMIDYLQLMRVPYISENRNLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNENSNMKGIAEIIIGKQRNGPIGTVRLKFNGQWSRFDNYAEYQYKN
SIO_010081: TREMTM_RS00520
subclass of: SO_0000673
so part of: TREMTM_RS00520
location: complement(100508..101905)
location: region:100508-101905:-1
so has part: feature:100508-101905:-1:exon

WP_083172332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100508-101905:-1:exon

TREMTM_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00525
old locus tag: TRABTM_A_01080
so part of: sequence
location: 102174..102674
location: region:102174-102674:1
so has part: feature:102174-102674:1:exon
subclass of: SO_0000010

position:102174:1
position: 102174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102674:1
position: 102674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102174-102674:1:exon

TREMTM_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00525
old locus tag: TRABTM_A_01080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004936793.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MAGRGINKVIIVGNLGQDPEIRHMPNGGAVANITLATSESWRDKQTGEIKEKTEWHRVVLFGKLAEIAGEYLRKGSQVYIEGSLQTRKWQDNSGQDRYTTEILVNLGGTMQMIGGRPGNAQKGEWRQSTQVNTFSEGKTPKTLQSQNMSSASDNEHQIDFDDDIPF
SIO_010081: TREMTM_RS00525
subclass of: SO_0000673
so part of: TREMTM_RS00525
location: 102174..102674
location: region:102174-102674:1
so has part: feature:102174-102674:1:exon

WP_083172333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102174-102674:1:exon

TREMTM_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00530
old locus tag: TRABTM_A_T0160
so part of: sequence
location: complement(102697..102772)
location: region:102697-102772:-1
so has part: feature:102697-102772:-1:exon
subclass of: SO_0000663

position:102697:-1
position: 102697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102772:-1
position: 102772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102697-102772:-1:exon

TREMTM_RS00530
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00530
old locus tag: TRABTM_A_T0160
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(102737..102739),aa:Trp,seq:cca)
SIO_010081: TREMTM_RS00530
subclass of: SO_0000673
so part of: TREMTM_RS00530
location: complement(102697..102772)
location: region:102697-102772:-1
so has part: feature:102697-102772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102697-102772:-1:exon

TREMTM_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: proS
locus tag: TREMTM_RS00535
old locus tag: TRABTM_A_01090
so part of: sequence
location: 103029..104762
location: region:103029-104762:1
so has part: feature:103029-104762:1:exon
subclass of: SO_0000010

position:103029:1
position: 103029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104762:1
position: 104762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103029-104762:1:exon

TREMTM_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: proS
locus tag: TREMTM_RS00535
old locus tag: TRABTM_A_01090
EC number: 6.1.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411651.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO process: GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline--tRNA ligase
translation: MHTSQYMLSTLKEISTDVEVISHQLMLRAGMIRQLASGLYSWLPTGLQVLRKVEKIVREEMNNAGAIEVFMPIVQPADIWQKSKRWVQYGSELLRFIDRGARSFVLGPTHEEVITDLIRNEICSYKQLPLNFYQIQTKFRDELRPRFGVMRSREFLMKDAYSFHTNQDSLQITYDVMYQTYSNILNRMGLQFRAVQADTGSIGGSVSHEFHVLADSGEDYIVFSTSSNYAANIELAEAKDQVILRADPKEKMRLVDTNEACTLAKILEKFAIPVEKTVKTMLVRAKKNAIHPLLALIVRGDHHISDVKAAKILQVAAPLNFASEEEIRLFFGTRSDYIGPVNLQVPIIIDRSVAVMSDFTAGANADGKYFLGINWERDLPLPQVADLRKVSAGDRSPDGKGTLQIKRGIEVGHIFQLGTKYSDAMKAYVQNEEGRNKTLIMGCYGIGITRVVAAAIEQNHDDKGILWTESLAPFNVAIIPINMHNSFRVQQIAEEVYQQLKARGIDVILDDRKERPGVMFADMELIGIPHLLVIGDYNLNTGNIEYKNRRNGNKKIIKLGAIVDFILSEMATSFYKC
SIO_010081: TREMTM_RS00535
subclass of: SO_0000673
so part of: TREMTM_RS00535
location: 103029..104762
location: region:103029-104762:1
so has part: feature:103029-104762:1:exon

WP_083172335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103029-104762:1:exon

TREMTM_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tilS
locus tag: TREMTM_RS01575
so part of: sequence
location: complement(104843..105103)
location: region:104843-105103:-1
so has part: feature:104843-105103:-1:exon
subclass of: SO_0000010

position:104843:-1
position: 104843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105103:-1
position: 105103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104843-105103:-1:exon

TREMTM_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tilS
locus tag: TREMTM_RS01575
EC number: 6.3.4.19
inference: COORDINATES: protein motif:HMM:NF023162.2
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MVRSPNITEKVSVRFGSVHGLLYINGRRRGRKLKKILQELAIPPWQRGYIPLLFYNEKLIAAIGTFVTLEGTAHKFCSKWYLFRKS
SIO_010081: TREMTM_RS01575
subclass of: SO_0000673
so part of: TREMTM_RS01575
location: complement(104843..105103)
location: region:104843-105103:-1
so has part: feature:104843-105103:-1:exon

WP_231893356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104843-105103:-1:exon

TREMTM_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tilS
locus tag: TREMTM_RS00540
old locus tag: TRABTM_A_01110
so part of: sequence
location: complement(105109..106233)
location: region:105109-106233:-1
so has part: feature:105109-106233:-1:exon
subclass of: SO_0000010

position:105109:-1
position: 105109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106233:-1
position: 106233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105109-106233:-1:exon

TREMTM_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tilS
locus tag: TREMTM_RS00540
old locus tag: TRABTM_A_01110
EC number: 6.3.4.19
inference: COORDINATES: protein motif:HMM:TIGR02432.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MKNNTDDDQVQALCSSLSAKIKNYQGLLIAFSGGLDSTVLLDALYLIRNHKKFSRTCKNDLLLRAVYINHGLSIHADNWSVHCENECRRREIEFSTKYVNIVVNSESIEAAARTARYQALAENLVNDEILLTAHNKEDQVETLLLALKRGSGPAGLAAMAENYPFNGRLLLRPLLSYSRKELEIYANKRGLCWIEDDSNNNLRFDRNFLRIQILPPLLQRWPRFLDTVVRSAQICAEQEHLLDILLAETLAELIQPDGSLKFTKLIMMSDIKRAAILRRWLASNGVKMPTRKQLACIWQEVALSRHDAVAKIHINHHLQVRRFRECLYIIPILQQLPKKEIIFWPSKINKLILPIGLGTIIRSTIPNIKKNLTY
SIO_010081: TREMTM_RS00540
subclass of: SO_0000673
so part of: TREMTM_RS00540
location: complement(105109..106233)
location: region:105109-106233:-1
so has part: feature:105109-106233:-1:exon

WP_231893357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105109-106233:-1:exon

TREMTM_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: dnaE
locus tag: TREMTM_RS00545
old locus tag: TRABTM_A_01120
pseudo: true
so part of: sequence
location: complement(<106283..109586)
location: region:106283-109586:-1
so has part: feature:106283-109586:-1:exon
subclass of: SO_0000010

position:106283:-1
position: 106283
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:109586:-1
position: 109586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106283-109586:-1:exon

TREMTM_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: dnaE
locus tag: TREMTM_RS00545
old locus tag: TRABTM_A_01120
inference: COORDINATES: similar to AA sequence:RefSeq:NP_308213.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA polymerase III subunit alpha
SIO_010081: TREMTM_RS00545
subclass of: SO_0000673
so part of: TREMTM_RS00545
location: complement(<106283..109586)
location: region:106283-109586:-1
so has part: feature:106283-109586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106283-109586:-1:exon

TREMTM_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: fabZ
locus tag: TREMTM_RS00550
old locus tag: TRABTM_A_01130
pseudo: true
so part of: sequence
location: complement(109700..110172)
location: region:109700-110172:-1
so has part: feature:109700-110172:-1:exon
subclass of: SO_0000010

position:109700:-1
position: 109700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110172:-1
position: 110172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109700-110172:-1:exon

TREMTM_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: fabZ
locus tag: TREMTM_RS00550
old locus tag: TRABTM_A_01130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014354155.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3-hydroxyacyl-ACP dehydratase FabZ
SIO_010081: TREMTM_RS00550
subclass of: SO_0000673
so part of: TREMTM_RS00550
location: complement(109700..110172)
location: region:109700-110172:-1
so has part: feature:109700-110172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109700-110172:-1:exon

TREMTM_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00555
old locus tag: TRABTM_A_01140
so part of: sequence
location: complement(110337..110828)
location: region:110337-110828:-1
so has part: feature:110337-110828:-1:exon
subclass of: SO_0000010

position:110337:-1
position: 110337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110828:-1
position: 110828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110337-110828:-1:exon

TREMTM_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00555
old locus tag: TRABTM_A_01140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411665.1
GO function: GO:0051082 - unfolded protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpH family outer membrane protein
translation: MRIWLYAAVLAITIPNNAYAADKIAVVNISSIFQQSLHLNMIDKKLENEFKRRATELQFMELDLQTKIKILRQNISHIKTSEFSTLEKSVVAQRENLSKKAQEFEQDNRRRQTEERNKIMSNIQDAVKNVAIKEGYSVVIDASAVAYIKNAKDITANVIKNVR
SIO_010081: TREMTM_RS00555
subclass of: SO_0000673
so part of: TREMTM_RS00555
location: complement(110337..110828)
location: region:110337-110828:-1
so has part: feature:110337-110828:-1:exon

WP_083172336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110337-110828:-1:exon

TREMTM_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: bamA
locus tag: TREMTM_RS00560
old locus tag: TRABTM_A_01150
so part of: sequence
location: complement(111013..113439)
location: region:111013-113439:-1
so has part: feature:111013-113439:-1:exon
subclass of: SO_0000010

position:111013:-1
position: 111013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113439:-1
position: 113439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111013-113439:-1:exon

TREMTM_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: bamA
locus tag: TREMTM_RS00560
old locus tag: TRABTM_A_01150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004952214.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamA
translation: MAMKKLLLIVVALLLSSVNSATVYGTEYSENDAFVVKKIFFEGMHKITIDTALLFIPICIGDIITTEDISNTIRVLFATENFDDVRVLRNIDSLFINVKERPTITKITFSGNSLIKYYMLKQNLDIQGIIVGDNLDRAIIYHLKRWLEDFYYSNGKYNAIVKVLVMPQSLNCVDIKLVFNEGISAKVQQINIIGNHNFTKDNLTSKFKIRDKWYVGHRKYQKKNLAKDLESMYSFYLDYGYVRFNIESTQVNLTTDKKNIFITINITEGAQYKLCSTVVNGNMAGYFLEIENLTKVHHCELYNNSNIRKVKEKIKQLMGSYGYAYPSVLTQVEIKDVDKTVNLHIKIDAGKRFYVRKILFEGNDITKDLVIRREIPQKEGVKFCSDLIYQGKEHLNRLGYFEKVDVKTQPVPGYTNQIDVIYNIKERNTGSINMGIGLGTDSGVSFHFGIQQDNWLGTGNTVSLIGNKNNYKNYAELSINYPYLTVSGISLGSKLFYNDFINDKTDLSNYDLRSYGFSTTLCFPINKKNLLNISINYVHNNLLKREPKVTIWHYLNSIGINTKPKITTTNNKIKNNLSAYDFFIYIGLKYNNLDNGYFPTVGLNAIFNGKITMPGSNNKYYKITFDASKYIPLSESGNWVLKSRAHIGYADGFSGNEVPFYDNFYTGGASTVRGFRNNTIGPKEVYSRYNSSNISINYDYSDAVGGNVLAIASAEFIFPTPFLIKNSLRTSLFIDSGSVWNTDWQNNSATYYATIPDYSNPGNIRISTGIAMQWLSPLGPLSFSYAQPIKKYDGDKSEQLQFNIGKSW
SIO_010081: TREMTM_RS00560
subclass of: SO_0000673
so part of: TREMTM_RS00560
location: complement(111013..113439)
location: region:111013-113439:-1
so has part: feature:111013-113439:-1:exon

WP_083172338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111013-113439:-1:exon

TREMTM_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: frr
locus tag: TREMTM_RS00565
old locus tag: TRABTM_A_01160
so part of: sequence
location: complement(113844..114395)
location: region:113844-114395:-1
so has part: feature:113844-114395:-1:exon
subclass of: SO_0000010

position:113844:-1
position: 113844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114395:-1
position: 114395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113844-114395:-1:exon

TREMTM_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: frr
locus tag: TREMTM_RS00565
old locus tag: TRABTM_A_01160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011145051.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome recycling factor
translation: MINKICKDAEISMEKCVEAFKKHISKIRTGRASPSLLDSIQIEYYGKMMQLRQLSNILTEDSHTLSITLFDRTLIPAVEKAILTSDLGLTPSSTGTLIIVPIPPLTEERRRALIKAVNSEAEQCRVSVRNVRRYANVKIKSLLKDKIIDEDNDYRLQEIIQKLTNFWIKKIDILLKKKEEELM
SIO_010081: TREMTM_RS00565
subclass of: SO_0000673
so part of: TREMTM_RS00565
location: complement(113844..114395)
location: region:113844-114395:-1
so has part: feature:113844-114395:-1:exon

WP_083172339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113844-114395:-1:exon

TREMTM_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tsf
locus tag: TREMTM_RS00570
old locus tag: TRABTM_A_01170
so part of: sequence
location: complement(114446..115303)
location: region:114446-115303:-1
so has part: feature:114446-115303:-1:exon
subclass of: SO_0000010

position:114446:-1
position: 114446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115303:-1
position: 115303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114446-115303:-1:exon

TREMTM_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tsf
locus tag: TREMTM_RS00570
old locus tag: TRABTM_A_01170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009114147.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor Ts
translation: MANITTAMIKEIRERTGISIMECKKALVESKGDIELAIDKMRKLGKVKAAKKAGRVATEGIILNKITPDIKYGVLIEINCETDFVAKNVAFKAFCDEVINVATEERIMNIENIQTKFEKKRTELIVKFGENINIRRIGILEGDILVSYLHNNTHIGVIVSATNADIVSATDVTTKKLVMKHVAMHIAAIKPEYIKVEDIPSKMVYNENKIQLDIVRNLGCKSQEMTQKIVEGRMRKFFEEICLNDQLFVMDQSKTVGKLLCEYGIKINKFIRFEVGEGIQKRILF
SIO_010081: TREMTM_RS00570
subclass of: SO_0000673
so part of: TREMTM_RS00570
location: complement(114446..115303)
location: region:114446-115303:-1
so has part: feature:114446-115303:-1:exon

WP_083172341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114446-115303:-1:exon

TREMTM_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsB
locus tag: TREMTM_RS00575
old locus tag: TRABTM_A_01180
so part of: sequence
location: complement(115332..116039)
location: region:115332-116039:-1
so has part: feature:115332-116039:-1:exon
subclass of: SO_0000010

position:115332:-1
position: 115332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116039:-1
position: 116039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115332-116039:-1:exon

TREMTM_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsB
locus tag: TREMTM_RS00575
old locus tag: TRABTM_A_01180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012987187.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S2
translation: MTTISMRILFHAGVHFGHQTRYWNPKMKPFILGIRNKIHIINLDKTLIMFNEALKELKKIALRKGKILFVGTKKSANEEVKEAANSCNQFFVNYRWLGGMLTNWKTVRQSIKRLKELEIQSQDGTFEKITKKEALIRSREKNKLEKSLDGIKDMGGLPDALFVIDAKHEQIAIKEANNLGIPVFAIVDTNSDPECVNFIIPGNDDATRAIKLYLNVVTTTIRKDDSQNLVLERTG
SIO_010081: TREMTM_RS00575
subclass of: SO_0000673
so part of: TREMTM_RS00575
location: complement(115332..116039)
location: region:115332-116039:-1
so has part: feature:115332-116039:-1:exon

WP_083172342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115332-116039:-1:exon

TREMTM_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: map
locus tag: TREMTM_RS00580
old locus tag: TRABTM_A_01190
so part of: sequence
location: 116278..117072
location: region:116278-117072:1
so has part: feature:116278-117072:1:exon
subclass of: SO_0000010

position:116278:1
position: 116278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117072:1
position: 117072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116278-117072:1:exon

TREMTM_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: map
locus tag: TREMTM_RS00580
old locus tag: TRABTM_A_01190
EC number: 3.4.11.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411675.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MDILIKKPDDIAKMRIAGKLAAEVLEIIKPYIKIGVSTGELDHLCKKYITQKQNAISASLGYHGFPKSVCISVNEVVCHGIPCYKHKLKNGDILNIDVAVIKQGFYGDTSKMFIVGNPTIIGKRLCQITKESLYLAIRMVKPGIRLRTIGKAIQQFVEAKKFSVVREYCGHGIGKNFHEYPQVLHYDADDGGIVLKPGMVFTIEPMVNAGDFRIHTMKDGWTVKTTDRSLSAQYEHTVVVTEDGCEILTLNTDDTLQKVIHHLT
SIO_010081: TREMTM_RS00580
subclass of: SO_0000673
so part of: TREMTM_RS00580
location: 116278..117072
location: region:116278-117072:1
so has part: feature:116278-117072:1:exon

WP_083172642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116278-117072:1:exon

TREMTM_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00585
old locus tag: TRABTM_A_T0170
so part of: sequence
location: 117160..117233
location: region:117160-117233:1
so has part: feature:117160-117233:1:exon
subclass of: SO_0000663

position:117160:1
position: 117160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117233:1
position: 117233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117160-117233:1:exon

TREMTM_RS00585
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00585
old locus tag: TRABTM_A_T0170
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:117194..117196,aa:Met,seq:cat)
SIO_010081: TREMTM_RS00585
subclass of: SO_0000673
so part of: TREMTM_RS00585
location: 117160..117233
location: region:117160-117233:1
so has part: feature:117160-117233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117160-117233:1:exon

TREMTM_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
alternative label: mutU
alternative label: recL
gene: uvrD
locus tag: TREMTM_RS00590
old locus tag: TRABTM_A_01200
gene synonym: mutU; recL
pseudo: true
so part of: sequence
location: complement(117270..119408)
location: region:117270-119408:-1
so has part: feature:117270-119408:-1:exon
subclass of: SO_0000010

position:117270:-1
position: 117270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119408:-1
position: 119408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117270-119408:-1:exon

TREMTM_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
alternative label: mutU
alternative label: recL
gene: uvrD
locus tag: TREMTM_RS00590
old locus tag: TRABTM_A_01200
gene synonym: mutU; recL
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004957390.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA helicase II
SIO_010081: TREMTM_RS00590
subclass of: SO_0000673
so part of: TREMTM_RS00590
location: complement(117270..119408)
location: region:117270-119408:-1
so has part: feature:117270-119408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117270-119408:-1:exon

TREMTM_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ppa
locus tag: TREMTM_RS00595
old locus tag: TRABTM_A_01210
so part of: sequence
location: complement(119500..120039)
location: region:119500-120039:-1
so has part: feature:119500-120039:-1:exon
subclass of: SO_0000010

position:119500:-1
position: 119500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120039:-1
position: 120039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119500-120039:-1:exon

TREMTM_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ppa
locus tag: TREMTM_RS00595
old locus tag: TRABTM_A_01210
EC number: 3.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003855519.1
GO function: GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO process: GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic diphosphatase
translation: MIINKIPKIKNLPEDIYVIIEIPANADPIKYEIDKESGALFVERFLYATMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIKSRPVGILKMTDELGEDSKIVAVPHSKISKEYEHIKDIDNFPSLLKEQIIHFFEHYKDIEKGKWVKILGWDNAEAAKKEILNSLERAIKIKKI
SIO_010081: TREMTM_RS00595
subclass of: SO_0000673
so part of: TREMTM_RS00595
location: complement(119500..120039)
location: region:119500-120039:-1
so has part: feature:119500-120039:-1:exon

WP_083172344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119500-120039:-1:exon

TREMTM_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rsmD
locus tag: TREMTM_RS00600
old locus tag: TRABTM_A_01220
so part of: sequence
location: complement(120149..120742)
location: region:120149-120742:-1
so has part: feature:120149-120742:-1:exon
subclass of: SO_0000010

position:120149:-1
position: 120149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120742:-1
position: 120742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120149-120742:-1:exon

TREMTM_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rsmD
locus tag: TREMTM_RS00600
old locus tag: TRABTM_A_01220
EC number: 2.1.1.171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016157666.1
GO function: GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
translation: MIFKKNKKFTNNCPTGIIRIIGGMWRGSKILVPNRTALRPTPNRVRETLFNWLAPFIRGAHCLDCFAGSGALGIEALSRAAASVTLIEQDRLISQQLLNKLQLLQTKQAQVITTDTNLWLAHSSDANKFDIVFIDPPFNQGMISKTVAFLEYYNHLAKKSWIYIETEKKGTYSIPINWKIYKEKVAGKVAYRLYLRT
SIO_010081: TREMTM_RS00600
subclass of: SO_0000673
so part of: TREMTM_RS00600
location: complement(120149..120742)
location: region:120149-120742:-1
so has part: feature:120149-120742:-1:exon

WP_269446330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120149-120742:-1:exon

TREMTM_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpoH
locus tag: TREMTM_RS00605
old locus tag: TRABTM_A_01230
so part of: sequence
location: 121115..121972
location: region:121115-121972:1
so has part: feature:121115-121972:1:exon
subclass of: SO_0000010

position:121115:1
position: 121115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121972:1
position: 121972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121115-121972:1:exon

TREMTM_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpoH
locus tag: TREMTM_RS00605
old locus tag: TRABTM_A_01230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004245383.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoH
translation: MIKYMQILAYVPQGSLEYYVRTANAYPMLTAKEELELAERFHYHSDLEAAKQLILSHLRFVIHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPKVGVRLVSFVVHWIKAEIHEYVLRNWRIVKIATTKAQRKLFFNLRKTKPRLGWFNQKEVEMVAKELGVSSKDVREMESRMADQDIAFDPTPEDENSEGHTIAPLLYLHDKSSDFADSIEEANWDNHAVDKLSIALRALDERSRNIIRARWLDDTNKSTLQSLAYKYGISAERVRQLEKNAMKKIRLAIEE
SIO_010081: TREMTM_RS00605
subclass of: SO_0000673
so part of: TREMTM_RS00605
location: 121115..121972
location: region:121115-121972:1
so has part: feature:121115-121972:1:exon

WP_083172347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121115-121972:1:exon

TREMTM_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: serS
locus tag: TREMTM_RS00610
old locus tag: TRABTM_A_01240
so part of: sequence
location: complement(121986..123284)
location: region:121986-123284:-1
so has part: feature:121986-123284:-1:exon
subclass of: SO_0000010

position:121986:-1
position: 121986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123284:-1
position: 123284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121986-123284:-1:exon

TREMTM_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: serS
locus tag: TREMTM_RS00610
old locus tag: TRABTM_A_01240
EC number: 6.1.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888125.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine--tRNA ligase
translation: MLDPNLLRSNKLNTVTKKLALRKFKIDVVALRKQEEHRKLFQIKMEKLQAKRNALSKKIGFEKLRGEDIKLLCQEVNDLDEQLSTAKYELKALQESISNYALSLPNIPADEVPDGRQEKNNKEVLRWGKPKNYDFNIRDHVELGKVVEGFDFSAAVKLTGTRFVVMRGKIAQLHRALTQFMLDLHTEQHGYIEYYLPYIVNKFSLYGTGQLPKFSKDLFYVQSLNEEIEKKSYALIPTAEVPLTNLLRNQIIEEDALPLKMTAHTPCFRSEAGSYGRDNRGLIRMHQFEKVEIMQVVKPEQSMQALEEITGHAEKVLQLLQLPYRKILLSTVDMSFASCKTYDLEVWLPAQNTYREISSCSNIGDFQARRILARYRSKKDNKLQLVHTLNGSGLAVGRTLVAVLENYQLSDGRIEIPSIIRPYMGCITHINN
SIO_010081: TREMTM_RS00610
subclass of: SO_0000673
so part of: TREMTM_RS00610
location: complement(121986..123284)
location: region:121986-123284:-1
so has part: feature:121986-123284:-1:exon

WP_083172349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121986-123284:-1:exon

TREMTM_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: trxB
locus tag: TREMTM_RS00615
old locus tag: TRABTM_A_01250
so part of: sequence
location: 123630..124586
location: region:123630-124586:1
so has part: feature:123630-124586:1:exon
subclass of: SO_0000010

position:123630:1
position: 123630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124586:1
position: 124586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123630-124586:1:exon

TREMTM_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: trxB
locus tag: TREMTM_RS00615
old locus tag: TRABTM_A_01250
EC number: 1.8.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888190.1
GO function: GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin-disulfide reductase
translation: MYTMKNSKLLILGSGPAGYTAAIYAARANLNPVLITGMEQGGQLTTTSEIENWPGEHELLTGPLLMDRMYVHAKKFNTEIISDYITEVDLHKSPFFLIGDKEEYTCQALIIATGSSARYLGLPSEEAYKGKGVSTCATCDGFFYRNKKVAVVGGGNTAVEESLYLSKIAEKVHLIHRGNIFNSEKISLDRLMNKVNNNNIVLHKNSIIKEILGNERGVTGVYIKDINANKHEYIEVSGVFIAIGHSPNTAIFGSQLVLHKNGYLRVQSGINGNATSTSIPGVFAAGDVIDPNYGQAITSAGTGCMAALDAERYLNKID
SIO_010081: TREMTM_RS00615
subclass of: SO_0000673
so part of: TREMTM_RS00615
location: 123630..124586
location: region:123630-124586:1
so has part: feature:123630-124586:1:exon

WP_083172644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123630-124586:1:exon

TREMTM_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: cydD
locus tag: TREMTM_RS00620
old locus tag: TRABTM_A_01260
so part of: sequence
location: 124655..126391
location: region:124655-126391:1
so has part: feature:124655-126391:1:exon
subclass of: SO_0000010

position:124655:1
position: 124655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126391:1
position: 126391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124655-126391:1:exon

TREMTM_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: cydD
locus tag: TREMTM_RS00620
old locus tag: TRABTM_A_01260
EC number: 7.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975820.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0042883 - cysteine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
translation: MNNSRQKILIHWLNLQSKRIKGWLQLSILFGIIRALIIIAHSYILSFLLQALIIDRTQRSNLKEFFIALVTLFAFRAVVNYVHERIGFIAGSLLRRKIRAQILDQFERLGHAWIQRKKTGSWISMLLEQIENMQDFYARYLPQIFISAIVPFMILIVIFPINWISGLILFITAPMIPLFMFLVGTGAAEANRRNFLALEHLSGYFLDRLRGLETIRIFFNAKSEKNNICRLTEKFRQRTMEVLRLAFLSSGVLEFFSSIFIAILAVYFGFSYLGKLNLGSYSKKITLFDGFLVLILAPEFFQPLRDLGNFYHAKAKAVGAAESLVYFLEDDYDKVIGNKIPVSGPINLIARDLWILAPNGNKLAGPLNFSVKAGQRIAIIGTSGAGKSSLLKVLLGFLPYRGSILVNGIELRELAPLLWRKQLSWVSQNPLLPAITVRDNILLGAPDADDLQLMQVVNDTYLDDLLISLSDGINSSVGEDASLLSFGQAQRVALARALIRIPRLLLLDEPTASLDIHSERLIINTLEKTMLRQTTILVTHKLHLINYFDSIWVMNNGIIEHQGNYTNLVSTTGKIADF
SIO_010081: TREMTM_RS00620
subclass of: SO_0000673
so part of: TREMTM_RS00620
location: 124655..126391
location: region:124655-126391:1
so has part: feature:124655-126391:1:exon

WP_083172351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124655-126391:1:exon

TREMTM_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: cydC
locus tag: TREMTM_RS00625
old locus tag: TRABTM_A_01270
so part of: sequence
location: 126409..128130
location: region:126409-128130:1
so has part: feature:126409-128130:1:exon
subclass of: SO_0000010

position:126409:1
position: 126409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128130:1
position: 128130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126409-128130:1:exon

TREMTM_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: cydC
locus tag: TREMTM_RS00625
old locus tag: TRABTM_A_01270
EC number: 7.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019083457.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0034775 - glutathione transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
translation: MRVLLPYLFFLHRRLKQFFLGFLLTIVTLFAHICLLTVSGWFLASAATAGIVGNFNYMLPAAGMRIAAIIRTTCRWTERVVTHDATFNVLKYLRIYTFIRILPLFPSASNHFQRTELLNRLVSDVDTLDNLYLRVISPIAVAVVVILAVTSILYLLYPKFSLTLGILTLGILVLFSLLFYRYVKSVGELITIFRDNYRQQLNTLLSSNAELTVYGAVERYRNKLDNTEKKWQIHQSCQSSIGACAQSVLQLLTGLTLTFVLWISAGSVINDSFRELIALFFFATLSVFEAIVPVAGAFQYLGQVIASAVRLNILINQLPNVVFPHRGPVPATSVTFSAHKLYFKYPQHKVPAINNLSINVAAGEHIALLGHTGSGKSTMLQLLTRAWDPQKGYITFNGIPLPQWSESALRAMTAVVPQRVYIFSATLRDNLLLAAPYVNDEKICTILNLVGLEKLLKNKGLNLWLGDGGRSLSGGEHLRIGIARILLHEAPLWLLDEPTYGLDVVTEKQILQLLIKLGKGRTLIMVTHRLQELENLDRIYIMDRGTFIEKGSHKELMEQRGRYYNYHFAGGIV
SIO_010081: TREMTM_RS00625
subclass of: SO_0000673
so part of: TREMTM_RS00625
location: 126409..128130
location: region:126409-128130:1
so has part: feature:126409-128130:1:exon

WP_083172352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126409-128130:1:exon

TREMTM_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: infA
locus tag: TREMTM_RS00630
old locus tag: TRABTM_A_01280
so part of: sequence
location: 128206..128424
location: region:128206-128424:1
so has part: feature:128206-128424:1:exon
subclass of: SO_0000010

position:128206:1
position: 128206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128424:1
position: 128424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128206-128424:1:exon

TREMTM_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: infA
locus tag: TREMTM_RS00630
old locus tag: TRABTM_A_01280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-1
translation: MSKEDNIEMQGTVLETLPNTMFRVKLENGHVVSAHISGKIRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
SIO_010081: TREMTM_RS00630
subclass of: SO_0000673
so part of: TREMTM_RS00630
location: 128206..128424
location: region:128206-128424:1
so has part: feature:128206-128424:1:exon

WP_083172354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128206-128424:1:exon

TREMTM_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsA
locus tag: TREMTM_RS00635
old locus tag: TRABTM_A_01290
so part of: sequence
location: complement(128754..130397)
location: region:128754-130397:-1
so has part: feature:128754-130397:-1:exon
subclass of: SO_0000010

position:128754:-1
position: 128754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130397:-1
position: 130397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128754-130397:-1:exon

TREMTM_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsA
locus tag: TREMTM_RS00635
old locus tag: TRABTM_A_01290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007848972.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S1
translation: MTESFAQIFEEFIKKIETRPGSIIRGKVVSIAKDVVLIDAGLKSESTIPVEQFLDSQGKLEIKIGDQVDVTLDAVADGFGKTILSREKAKRHESWLMLEKAYKEVTNVIGVINGKVKGGFTVELNGIRAFLPGSLVDVRPIRDNLPLEGRELDFKIIKLDHKRNNVVVSRRAVIELENGADRDILLENLHEGKEVKGIVKNLTDYGAFVDLGGIDGLLHITDMAWKRVKHPKEIVNIGDEISVKVLKFDRDRTRVSLGMKQLIENPWVAIAKRYQEGTRLNGRVTNLTDYGCFVEIEEGIEGLVHVSEMDWTNKNIHPSKMVNVGELVEVIVLDIDEERHRISLGLKQCKINPWQQFAETFNKGDRVEGKIKSITDFGIFIGLKGGIDGLVHLSDISWNITGEEAIHNYKKGDEIAAIVLQVDAERERISLGIKQLAEDQFNNYLSLNKKGAIVTGKIVAVDTNKDITVVELANGVEGYLQLSEIFRNQEKSLIVGDNIEVKLIGIDRKNRVISLSTEVDKKKNISKKQEENFSNAMTEAFKAATKS
SIO_010081: TREMTM_RS00635
subclass of: SO_0000673
so part of: TREMTM_RS00635
location: complement(128754..130397)
location: region:128754-130397:-1
so has part: feature:128754-130397:-1:exon

WP_083172355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128754-130397:-1:exon

TREMTM_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: metG
locus tag: TREMTM_RS00640
old locus tag: TRABTM_A_01300
pseudo: true
so part of: sequence
location: 130733..>132361
location: region:130733-132361:1
so has part: feature:130733-132361:1:exon
subclass of: SO_0000010

position:130733:1
position: 130733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132361:1
position: 132361
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130733-132361:1:exon

TREMTM_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: metG
locus tag: TREMTM_RS00640
old locus tag: TRABTM_A_01300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013812187.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: methionine--tRNA ligase
SIO_010081: TREMTM_RS00640
subclass of: SO_0000673
so part of: TREMTM_RS00640
location: 130733..>132361
location: region:130733-132361:1
so has part: feature:130733-132361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130733-132361:1:exon

TREMTM_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: gyrB
locus tag: TREMTM_RS00645
old locus tag: TRABTM_A_01310
so part of: sequence
location: 132531..134948
location: region:132531-134948:1
so has part: feature:132531-134948:1:exon
subclass of: SO_0000010

position:132531:1
position: 132531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134948:1
position: 134948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132531-134948:1:exon

TREMTM_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: gyrB
locus tag: TREMTM_RS00645
old locus tag: TRABTM_A_01310
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MCNYYTSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGFCKEIVVVIHEGNSISVHDDGRGIPTGIHEEEGISAAEVIMTMLHAGGKFDDKSYKVSGGLHGVGISVVNALSQKLELIIKREGKIYQQIYHNGVPQFPLKIVGKTDHTGTIVRFWPSFDTFTNKTEFQYEILAKRLRELSFLNSGISIRLCDKRNYKEDHFHYEGGIKSFIESLNKNKISIHPNIFYFSTEKDNISVEIALQWNDSFQENIYCFTNNIPQQDGGTHLAGFRTAMTRTINYYLDKEGYSKKAKINVTGEDIREGIIAIISVKLSDPKFSSQTKNKLVSSEVKAAVESLINDRLFEFLLENPNDAKIIVEKIIDSARAREAARKAREITRRKGAIIDISGLPGKLADCQEQDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNAEKARFEKILSSQEVTTLITALGCGIGKEEYNQDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPKIIEQGHVFIAQPPLYKVKNGKKEQYFKDHEDMDRYMIAMAVHGATLYANSPKIVIKGKNLENLVTEYYGIQKMIERIEQRFPSLLLYSLIYHQVLTKEHLNQKNKVIFWIESLVQILKNNNKHGSIYNFEVKKNYESQLFEPILRIRTNGVDTDYILGYDFINSNEYLKLKNIGKKLDNLIKIDAFIKRGDRYQQINSFEQAFEWLIKESRRGLVIQRYKGLGEMNPKQLWETTMDPRRRCMLRVTINDVIAADQLFNTLMGDTVEPRRMFIQENALKAENIDI
SIO_010081: TREMTM_RS00645
subclass of: SO_0000673
so part of: TREMTM_RS00645
location: 132531..134948
location: region:132531-134948:1
so has part: feature:132531-134948:1:exon

WP_083172358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132531-134948:1:exon

TREMTM_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00650
old locus tag: TRABTM_A_T0180
so part of: sequence
location: 135060..135133
location: region:135060-135133:1
so has part: feature:135060-135133:1:exon
subclass of: SO_0000663

position:135060:1
position: 135060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135133:1
position: 135133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135060-135133:1:exon

TREMTM_RS00650
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00650
old locus tag: TRABTM_A_T0180
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:135094..135096,aa:Val,seq:gac)
SIO_010081: TREMTM_RS00650
subclass of: SO_0000673
so part of: TREMTM_RS00650
location: 135060..135133
location: region:135060-135133:1
so has part: feature:135060-135133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135060-135133:1:exon

TREMTM_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: pykF
locus tag: TREMTM_RS00655
old locus tag: TRABTM_A_01320
so part of: sequence
location: 135313..136716
location: region:135313-136716:1
so has part: feature:135313-136716:1:exon
subclass of: SO_0000010

position:135313:1
position: 135313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136716:1
position: 136716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135313-136716:1:exon

TREMTM_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: pykF
locus tag: TREMTM_RS00655
old locus tag: TRABTM_A_01320
EC number: 2.7.1.40
inference: COORDINATES: similar to AA sequence:RefSeq:NP_460343.1
GO function: GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate kinase PykF
translation: MKKTKIVCTIGPKTDSEEVLSSLLNAGMNVMRLNFSHGNYDEHEKKIKNLRAVLNKTALQAAIMLDTKGPEIRTMKLENGKDVSLSAGQIFTFTTDQNVIGNSKRVAVTYSGFNQDLKVGNTVLVDDGLLCMNVIEILQDQVLCQVLNNGDLGENKGINLPGVSLALPALSEKDKSDLIFGCKQGVDFIAASFIRKQSDVRKIRVHLKQHGGEHIQIISKIENQEGLDNFDKILEESDGIMVARGDLGVEIPVEEVIFAQKMIIAKCNKARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLESVTIMAKICNRTDRMLSSRINNISKLCITEAICRGAVETAEKLESPLIVVATESGKSAKYIRQYFPKSEILALTTNTFTARHLLLSKGITCKLIDKINSSDDFYRIGKATALKNNLAIKGNIIVMVSGSGVSSGTTNTLSVHIL
SIO_010081: TREMTM_RS00655
subclass of: SO_0000673
so part of: TREMTM_RS00655
location: 135313..136716
location: region:135313-136716:1
so has part: feature:135313-136716:1:exon

WP_083172360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135313-136716:1:exon

TREMTM_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00660
old locus tag: TRABTM_A_01330
pseudo: true
so part of: sequence
location: complement(136711..137106)
location: region:136711-137106:-1
so has part: feature:136711-137106:-1:exon
subclass of: SO_0000010

position:136711:-1
position: 136711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137106:-1
position: 137106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136711-137106:-1:exon

TREMTM_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00660
old locus tag: TRABTM_A_01330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017456581.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SufE family protein
SIO_010081: TREMTM_RS00660
subclass of: SO_0000673
so part of: TREMTM_RS00660
location: complement(136711..137106)
location: region:136711-137106:-1
so has part: feature:136711-137106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136711-137106:-1:exon

TREMTM_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01580
so part of: sequence
location: complement(137467..137541)
location: region:137467-137541:-1
so has part: feature:137467-137541:-1:exon
subclass of: SO_0000010

position:137467:-1
position: 137467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137541:-1
position: 137541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137467-137541:-1:exon

TREMTM_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01580
inference: COORDINATES: protein motif:HMM:NF012488.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKVRYRIARFINAESVDEIIFVY
SIO_010081: TREMTM_RS01580
subclass of: SO_0000673
so part of: TREMTM_RS01580
location: complement(137467..137541)
location: region:137467-137541:-1
so has part: feature:137467-137541:-1:exon

WP_231893360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137467-137541:-1:exon

TREMTM_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01585
pseudo: true
so part of: sequence
location: complement(137840..>138049)
location: region:137840-138049:-1
so has part: feature:137840-138049:-1:exon
subclass of: SO_0000010

position:137840:-1
position: 137840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138049:-1
position: 138049
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137840-138049:-1:exon

TREMTM_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01585
inference: COORDINATES: protein motif:HMM:NF013614.2
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SufD family Fe-S cluster assembly protein
SIO_010081: TREMTM_RS01585
subclass of: SO_0000673
so part of: TREMTM_RS01585
location: complement(137840..>138049)
location: region:137840-138049:-1
so has part: feature:137840-138049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137840-138049:-1:exon

TREMTM_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01590
so part of: sequence
location: complement(138492..138689)
location: region:138492-138689:-1
so has part: feature:138492-138689:-1:exon
subclass of: SO_0000010

position:138492:-1
position: 138492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138689:-1
position: 138689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138492-138689:-1:exon

TREMTM_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIDACRLVFVDGHYDPSLSDNDTWKIEKGAARKSLPAPIQPDFFLHLTERLSQETTKIYKNLLY
SIO_010081: TREMTM_RS01590
subclass of: SO_0000673
so part of: TREMTM_RS01590
location: complement(138492..138689)
location: region:138492-138689:-1
so has part: feature:138492-138689:-1:exon

WP_231893359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138492-138689:-1:exon

TREMTM_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01595
old locus tag: TRABTM_A_01370
pseudo: true
so part of: sequence
location: complement(<138964..139626)
location: region:138964-139626:-1
so has part: feature:138964-139626:-1:exon
subclass of: SO_0000010

position:138964:-1
position: 138964
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:139626:-1
position: 139626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138964-139626:-1:exon

TREMTM_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01595
old locus tag: TRABTM_A_01370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006324930.1
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SufD family Fe-S cluster assembly protein
SIO_010081: TREMTM_RS01595
subclass of: SO_0000673
so part of: TREMTM_RS01595
location: complement(<138964..139626)
location: region:138964-139626:-1
so has part: feature:138964-139626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138964-139626:-1:exon

TREMTM_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: sufA
locus tag: TREMTM_RS00680
old locus tag: TRABTM_A_01390
so part of: sequence
location: complement(139710..140087)
location: region:139710-140087:-1
so has part: feature:139710-140087:-1:exon
subclass of: SO_0000010

position:139710:-1
position: 139710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140087:-1
position: 140087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139710-140087:-1:exon

TREMTM_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: sufA
locus tag: TREMTM_RS00680
old locus tag: TRABTM_A_01390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411251.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly scaffold SufA
translation: MQLNDNKMKIFSLEKKILIGVTLTKSAIRQINKLIEADPNMLGLRFSIKKSGCAGLVYFMEKVTQINSSDIVYEHDGARLYVPMKAMPFIDGTVLDYIQEGVNYVFKFNNPKAKSTCGCGKSFGI
SIO_010081: TREMTM_RS00680
subclass of: SO_0000673
so part of: TREMTM_RS00680
location: complement(139710..140087)
location: region:139710-140087:-1
so has part: feature:139710-140087:-1:exon

WP_083172363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139710-140087:-1:exon

TREMTM_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: pheT
locus tag: TREMTM_RS00685
old locus tag: TRABTM_A_01400
so part of: sequence
location: complement(140179..142599)
location: region:140179-142599:-1
so has part: feature:140179-142599:-1:exon
subclass of: SO_0000010

position:140179:-1
position: 140179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142599:-1
position: 142599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140179-142599:-1:exon

TREMTM_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: pheT
locus tag: TREMTM_RS00685
old locus tag: TRABTM_A_01400
EC number: 6.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012144882.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit beta
translation: MKFSEFWLREWVNLAIDSNTLADQMTMAGLEVNSIEPVAGNFTGVVIGKIVECRPHINNDKLFITTVDIGDKILHNIACEAKNCRKNLIVAVATTGAVLPVTFKKSNFVSEGILCSFPTLGIEGNNNYIIELPEDAPIGKDIREYLQLEDNILDINITPNRTDCLGLLGIAREISVFNRINLKKTINNTVLPVINDKIFIGVDVADACPRYLGRIVKNININIRTPLWMKEKLRRCGYQSIDAIIDITNYVLLELGQPTHIFDFDSIESGILVRYARKNELLTLVNGSNITLTSDTLVIADYSKVLSIAGIIVGANSCINYSSTCNLFLECAFFNPLIITGAARRYKLRTNTLHRYERGVDPTMQQLAIERVTELLVAICGGQPGPVMDITSKIIQSNTIILHRKKLDRIIGHIIKNDDVNDLLTRIGCKVRRYTKEDYWQVTAPIWRFDISIEEDLIEEIARLYGYNMIPSVPVRANLTISPSSESLQLARVKMLLVDRGYQETIIYSFVDPKKQALFHPYQVPLVLQSPISSNRSVMRLSLWTGLIDTLIYNQNRQQQRIRLFESGFCFIPDNKNEIGIRQDFMFAGVITGTLFNEYWDKEQKLVDFYDIKGDIEAIFDILGKLEDIEFRVQQHPALHPGQSAAIYFQKEFIGFIGVIHPEIEAKLNLKSRTLVFEFLWDKVIKCKVHKIIDISKFPANRRDIAIVVSDNVAVADIINECKKVIGNQLVNITIFDIWYGIKKGFKSIAISLILQNKNHTLEEKEITDIIDKCIFYLKIKFNAYLRNENSIKLLNKNTSLLIHKY
SIO_010081: TREMTM_RS00685
subclass of: SO_0000673
so part of: TREMTM_RS00685
location: complement(140179..142599)
location: region:140179-142599:-1
so has part: feature:140179-142599:-1:exon

WP_083172364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140179-142599:-1:exon

TREMTM_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: pheS
locus tag: TREMTM_RS00690
old locus tag: TRABTM_A_01410
so part of: sequence
location: complement(142615..143598)
location: region:142615-143598:-1
so has part: feature:142615-143598:-1:exon
subclass of: SO_0000010

position:142615:-1
position: 142615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143598:-1
position: 143598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142615-143598:-1:exon

TREMTM_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: pheS
locus tag: TREMTM_RS00690
old locus tag: TRABTM_A_01410
EC number: 6.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit alpha
translation: MPKIEDLVAQAKKEIEQSQDTTTLDSIRIKYLGKKGFFSQEINNLRNLAPEERPFVGAILNKVKQEFKKELNKRKIILEKLTFDIKLANDTLDISLPGRRMENGGLHPISDTIARIEYFFGTLGFSVVTGPEIEDTYHNFDALNIPSHHSARTNKDTFWLDNTRLLRTHTSGVQIRIMKLQKPPIRIISSGRVYRNDYDYTHTPMFHQIEGLIIDTNISFTNLKGTLHDFLCNFFSENIQIRFRPSYFPFTELSAEVDLMRKKGNWLEVMGCGMIHPNVLRNVGIDPDIYSGFAFGIGIERLTMIYYNITDLRAFFENDLRFLKQFK
SIO_010081: TREMTM_RS00690
subclass of: SO_0000673
so part of: TREMTM_RS00690
location: complement(142615..143598)
location: region:142615-143598:-1
so has part: feature:142615-143598:-1:exon

WP_083172366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142615-143598:-1:exon

TREMTM_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplT
locus tag: TREMTM_RS00695
old locus tag: TRABTM_A_01420
so part of: sequence
location: complement(143623..143979)
location: region:143623-143979:-1
so has part: feature:143623-143979:-1:exon
subclass of: SO_0000010

position:143623:-1
position: 143623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143979:-1
position: 143979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143623-143979:-1:exon

TREMTM_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplT
locus tag: TREMTM_RS00695
old locus tag: TRABTM_A_01420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L20
translation: MARVKRSVVARARHKKILKKAKGYYGARSRIYRVAFQAVTKAGQYAYRDRRQKKRQFRKLWITRINAAARQNNICYSKFINKLKQASINIDRKILADIAVFDKSSFTVLVDKAKGALT
SIO_010081: TREMTM_RS00695
subclass of: SO_0000673
so part of: TREMTM_RS00695
location: complement(143623..143979)
location: region:143623-143979:-1
so has part: feature:143623-143979:-1:exon

WP_083172368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143623-143979:-1:exon

TREMTM_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpmI
locus tag: TREMTM_RS00700
old locus tag: TRABTM_A_01430
so part of: sequence
location: complement(144038..144229)
location: region:144038-144229:-1
so has part: feature:144038-144229:-1:exon
subclass of: SO_0000010

position:144038:-1
position: 144038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144229:-1
position: 144229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144038-144229:-1:exon

TREMTM_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpmI
locus tag: TREMTM_RS00700
old locus tag: TRABTM_A_01430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L35
translation: MLKIKSVRGAAKRFKKTASGGFKRKHANMRHILTKKATKRKRHLHQKTMVSKSDLGLVMRCLV
SIO_010081: TREMTM_RS00700
subclass of: SO_0000673
so part of: TREMTM_RS00700
location: complement(144038..144229)
location: region:144038-144229:-1
so has part: feature:144038-144229:-1:exon

WP_083172370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144038-144229:-1:exon

TREMTM_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: infC
locus tag: TREMTM_RS00705
old locus tag: TRABTM_A_01440
so part of: sequence
location: complement(144262..144810)
location: region:144262-144810:-1
so has part: feature:144262-144810:-1:exon
subclass of: SO_0000010

position:144262:-1
position: 144262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144810:-1
position: 144810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144262-144810:-1:exon

TREMTM_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: infC
locus tag: TREMTM_RS00705
old locus tag: TRABTM_A_01440
inference: COORDINATES: similar to AA sequence:RefSeq:NP_310452.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-3
translation: MKGGKRIQSMRSNRINREIRNAEVRLTDIDGRQIGIVSINEAIEKAEEAGVDLIEVSPNADPPVCRIMDYGKFIYEKSKLAKEQKKKQKVIQVKEIKFRPSTDKNDYQVKIRNLIRFLEEGDKAKIILRFRGREISHQHIGIEVLNRICNDLSEIAFVESFPSNIEGRQMIMFLAPKKQCKT
SIO_010081: TREMTM_RS00705
subclass of: SO_0000673
so part of: TREMTM_RS00705
location: complement(144262..144810)
location: region:144262-144810:-1
so has part: feature:144262-144810:-1:exon

WP_083172372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144262-144810:-1:exon

TREMTM_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: thrS
locus tag: TREMTM_RS00710
old locus tag: TRABTM_A_01450
so part of: sequence
location: complement(144814..146742)
location: region:144814-146742:-1
so has part: feature:144814-146742:-1:exon
subclass of: SO_0000010

position:144814:-1
position: 144814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146742:-1
position: 146742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144814-146742:-1:exon

TREMTM_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: thrS
locus tag: TREMTM_RS00710
old locus tag: TRABTM_A_01450
EC number: 6.1.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010245687.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine--tRNA ligase
translation: MLVITLPSGIQRKFANPVSTIDIARDICPKLAKYCIAGSVNGKLVDAVDIIDHNAEIVIFTAKDEVSLEIIRYSCAHLLGHAIKQLWPNTKMVIGSIIDKGFYYDIDRDISLTKNDLNLLEIRMHKLAEKNYDIIKEKVSWKQARDIFINRGEDYKVAFLDEEISRNTYLELYHYEEYIDICCGIHVPNIRFCHNFSIEKISGVYWRGNNKNKMLQRIYGTAWENKKKLNTYLQQLEEAVKRDHRKIGKQLDLYHIKEDAPGMVFWHNDGWTIFKELESFIRSKLKLYQYQEVKGPFMIDRVLWEKTGHWDNYAENIFTTSSENREYCIKPMNCLGHVLIFNQGLKSYRDLPVRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIQDEVNNCIKMVYNVYSTFGFENILVKLSTRPEKRIGNDDTWNRAEHYLATALIENNITFEYKPGDGAFYGPKIEFTLLDCLDRSWQCGTVQLDFSLPGRLNAFYIGENNVRTAPVMIHRAILGSIERFIGILTEEYAGFYPTWMAPLQVVVMNITDNQSIYVAKLTEQLSAEGIRVKADLRNETIGLKIREHTLRRVPYMLVCGDKEMATSNVAVRTNRGKDLGRINVKDFIAKLKQEIANYNIYQLEE
SIO_010081: TREMTM_RS00710
subclass of: SO_0000673
so part of: TREMTM_RS00710
location: complement(144814..146742)
location: region:144814-146742:-1
so has part: feature:144814-146742:-1:exon

WP_083172374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144814-146742:-1:exon

TREMTM_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: lysS
locus tag: TREMTM_RS00715
old locus tag: TRABTM_A_01460
so part of: sequence
location: complement(146826..148337)
location: region:146826-148337:-1
so has part: feature:146826-148337:-1:exon
subclass of: SO_0000010

position:146826:-1
position: 146826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148337:-1
position: 148337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146826-148337:-1:exon

TREMTM_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: lysS
locus tag: TREMTM_RS00715
old locus tag: TRABTM_A_01460
EC number: 6.1.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888567.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine--tRNA ligase
translation: MSEHLHNSAISKKKNNELRSRHEKLTLLRQQGIAFPNDFRKNAVSNQLYTKYGNKNNKELKALNIEVSIAGRMMTRRIMGKASFVTLQDIGGKIQLYISCNDIYETYYNEHFKKWDLGDIIGARGRLFKTSTGELSVHCIEIRLLTKAMRPLPDKFHGLADQENKYRQRYLNLITNEKSRKTFKIRSRIMEEIRRFMIDNDFMEVETPMMQTIPGGATARPFITHHNALDIDLYLRIAPELYLKRLVIGGFERVFEINRNFRNEGLSPRHNPEFTMLELYIAYADYLDLILFVEKFFKTLTKKVLGTNLIYYGDKKLDFSKKFKQITMKEAICHYCPEIRPQMIENMISATNIAEYLGIKINKSWGLGRLQTEIFEKKTKNYLIQPTFITAYPAEVSPLARRNDENHFLSDRFEFFICGREIGNGFSELNDAEDQAERLLAQAKAKKNGDDEAMFYDEDYITALEYGLPPTAGLGIGIDRLIMLLTNNHTINDVILFPTLRPK
SIO_010081: TREMTM_RS00715
subclass of: SO_0000673
so part of: TREMTM_RS00715
location: complement(146826..148337)
location: region:146826-148337:-1
so has part: feature:146826-148337:-1:exon

WP_083172376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146826-148337:-1:exon

TREMTM_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: prfB
locus tag: TREMTM_RS00720
old locus tag: TRABTM_A_01470
so part of: sequence
location: complement(148347..149445)
location: region:148347-149445:-1
so has part: feature:148347-149445:-1:exon
subclass of: SO_0000010

position:148347:-1
position: 148347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149445:-1
position: 149445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148347-149445:-1:exon

TREMTM_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: prfB
locus tag: TREMTM_RS00720
old locus tag: TRABTM_A_01470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_095522726.1
ribosomal slippage: true
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 2
translation: MFEINLVKNHIKNISERITFIRGYLNHDIKKERLAELKIKLEQPEIWQNPKLAKFLVKERSYLENIVKTIDQFIHDLENITDIFKIASEDDEKEIFIELKRELSSLEVKLGQLEFSKMFSRKYDSADCYVDIQAGSGGTEAQDWASMLLRMYLRWSEYHGFKTKIIEESEGEVVGIKSVTIKVIGPYAYGWLRTETGVHRLVRKSPFNSGRQRHTSFSSAFVYPEIDDDIDIEIKPTELRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQSDRSQHKNKDQAIKQLKAKLYEFKLQKKNAEKKAIEENKSDICWGSQIRSYVLDKSRIKDLRTGMETRNAQSVLDGNLDKFIEASLKAGL
SIO_010081: TREMTM_RS00720
subclass of: SO_0000673
so part of: TREMTM_RS00720
location: complement(join(148347..149369,149371..149445))
location: region:148347-149445:-1
so has part: feature:149371-149445:-1:exon
so has part: feature:148347-149369:-1:exon

WP_156763239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149371-149445:-1:exon

position:149371:-1
position: 149371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148347-149369:-1:exon

position:149369:-1
position: 149369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TREMTM_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00725
old locus tag: TRABTM_A_01490
pseudo: true
so part of: sequence
location: complement(149571..150978)
location: region:149571-150978:-1
so has part: feature:149571-150978:-1:exon
subclass of: SO_0000010

position:149571:-1
position: 149571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150978:-1
position: 150978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149571-150978:-1:exon

TREMTM_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00725
old locus tag: TRABTM_A_01490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014889142.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Do family serine endopeptidase
SIO_010081: TREMTM_RS00725
subclass of: SO_0000673
so part of: TREMTM_RS00725
location: complement(149571..150978)
location: region:149571-150978:-1
so has part: feature:149571-150978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149571-150978:-1:exon

TREMTM_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplM
locus tag: TREMTM_RS00730
old locus tag: TRABTM_A_01500
so part of: sequence
location: 151496..151924
location: region:151496-151924:1
so has part: feature:151496-151924:1:exon
subclass of: SO_0000010

position:151496:1
position: 151496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151924:1
position: 151924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151496-151924:1:exon

TREMTM_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplM
locus tag: TREMTM_RS00730
old locus tag: TRABTM_A_01500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MKTFIVKPNMVKHDWYIIDAKEKILGRIATEIAFRLRGKHKAEYTPHVDIGDYIIVLNAEKVVVSGNKNNDKIYYHYTGYVGGIKKSNFKDMIARNSKLVIEIAVKGMLPTGPLGRAMFRKLKVYEGTEHNHSAQKPKVLNI
SIO_010081: TREMTM_RS00730
subclass of: SO_0000673
so part of: TREMTM_RS00730
location: 151496..151924
location: region:151496-151924:1
so has part: feature:151496-151924:1:exon

WP_083172378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151496-151924:1:exon

TREMTM_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsI
locus tag: TREMTM_RS00735
old locus tag: TRABTM_A_01510
so part of: sequence
location: 151940..152332
location: region:151940-152332:1
so has part: feature:151940-152332:1:exon
subclass of: SO_0000010

position:151940:1
position: 151940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152332:1
position: 152332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151940-152332:1:exon

TREMTM_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsI
locus tag: TREMTM_RS00735
old locus tag: TRABTM_A_01510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MVINQYYGTGRRKSSSARVFIKDGNGNIIINKRSLDQYFGLETTRIRVFQPLELVNMKGKLDIYITVKGGGISGQAGAIRHGITRALIEYDEKLRPYFRKAGFVTRDSRHVERKKFGLHKSRKRPQFSKR
SIO_010081: TREMTM_RS00735
subclass of: SO_0000673
so part of: TREMTM_RS00735
location: 151940..152332
location: region:151940-152332:1
so has part: feature:151940-152332:1:exon

WP_083172380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151940-152332:1:exon

TREMTM_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rsmI
locus tag: TREMTM_RS00740
old locus tag: TRABTM_A_01520
so part of: sequence
location: 152604..153494
location: region:152604-153494:1
so has part: feature:152604-153494:1:exon
subclass of: SO_0000010

position:152604:1
position: 152604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153494:1
position: 153494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152604-153494:1:exon

TREMTM_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rsmI
locus tag: TREMTM_RS00740
old locus tag: TRABTM_A_01520
EC number: 2.1.1.198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410090.1
GO function: GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
translation: MNQYQEINISASTLYIVPTPIGNLGDITYRSLSVLQGVDIIAAENTRNTGFLLQHFAINAKLFTFHNYNEKQRTKILLEQLQNGKSIALVSDAGTPLINDSGYHLVRICHECSIRIVPLPGACAAITALSASGLPSNRFCYEGFIPAKRKARLDFLQYLAKESRTMIFYESTHRLLESLADMVIVWGSLRYIVLARELTKTWETIYGAPVAKLISWIHEDKMRCRGEISLIVKGYQEQKNVLYPKYLRTLSLLLEELPLKKAVSMVAKLHSVKKNIMYRCALDLQKKRNLAHFHRK
SIO_010081: TREMTM_RS00740
subclass of: SO_0000673
so part of: TREMTM_RS00740
location: 152604..153494
location: region:152604-153494:1
so has part: feature:152604-153494:1:exon

WP_083172646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152604-153494:1:exon

TREMTM_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rnpB
locus tag: TREMTM_RS00745
old locus tag: TRABTM_A_NC0060
so part of: sequence
location: 153522..153887
location: region:153522-153887:1
so has part: feature:153522-153887:1:exon
subclass of: SO_0000011

position:153522:1
position: 153522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153887:1
position: 153887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153522-153887:1:exon

TREMTM_RS00745
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1835721
nc RNA class: RNase_P_RNA
gene: rnpB
locus tag: TREMTM_RS00745
old locus tag: TRABTM_A_NC0060
product: RNase P RNA component class A
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00010
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TREMTM_RS00745
subclass of: SO_0000673
so part of: TREMTM_RS00745
location: 153522..153887
location: region:153522-153887:1
so has part: feature:153522-153887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153522-153887:1:exon

TREMTM_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00750
old locus tag: TRABTM_A_T0190
so part of: sequence
location: complement(154014..154087)
location: region:154014-154087:-1
so has part: feature:154014-154087:-1:exon
subclass of: SO_0000663

position:154014:-1
position: 154014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154087:-1
position: 154087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154014-154087:-1:exon

TREMTM_RS00750
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00750
old locus tag: TRABTM_A_T0190
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(154051..154053),aa:Arg,seq:tct)
SIO_010081: TREMTM_RS00750
subclass of: SO_0000673
so part of: TREMTM_RS00750
location: complement(154014..154087)
location: region:154014-154087:-1
so has part: feature:154014-154087:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154014-154087:-1:exon

TREMTM_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: cysS
locus tag: TREMTM_RS00755
old locus tag: TRABTM_A_01540
so part of: sequence
location: complement(154258..155664)
location: region:154258-155664:-1
so has part: feature:154258-155664:-1:exon
subclass of: SO_0000010

position:154258:-1
position: 154258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155664:-1
position: 155664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154258-155664:-1:exon

TREMTM_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: cysS
locus tag: TREMTM_RS00755
old locus tag: TRABTM_A_01540
EC number: 6.1.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004244247.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine--tRNA ligase
translation: MLKIFNTLTRKKEKFKPISSSKVGIYVCGITVYDLCHIGHGRTFVFFDIVTRYLRYRGFNVNYIRNITDIDDKIIKRATEKGDTVQHLTESMILEMHRDFEILNILRPDNEPRATHYIDAIIEMVSKLIEKKHAYVAYNGDIMFSVKTQNNYGLLSQQNIEQLQVFSCTEVNKVKKNPIDFVLWKMSKYGEPSWQSPWGKGRPGWHIECSAMNIKHLGYHFDIHGGGSDLIFPHHENEIAQSTCIHNGPYVNIWMHSGMVMVNGNKMSKSTGNFFTVRDVLQNYDAETIRYFLISGHYRNQLNYSKENIKQARAAIERLYIALRGTDTTIAPTGGTKFVEQFIAAMDDDFNTPEAYAVLFSIAREINRLKSQHPDAVPGMAATLRHLAGVLGLLQQDPGTFLQQKANTADKSNKVNNNENIQIAALIKQRNKARNCKQWAIADQIRDKLNMLGIVLEDNHKGTTWRRN
SIO_010081: TREMTM_RS00755
subclass of: SO_0000673
so part of: TREMTM_RS00755
location: complement(154258..155664)
location: region:154258-155664:-1
so has part: feature:154258-155664:-1:exon

WP_083172382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154258-155664:-1:exon

TREMTM_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: dnaX
locus tag: TREMTM_RS00760
old locus tag: TRABTM_A_01550
so part of: sequence
location: complement(156148..157812)
location: region:156148-157812:-1
so has part: feature:156148-157812:-1:exon
subclass of: SO_0000010

position:156148:-1
position: 156148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157812:-1
position: 157812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156148-157812:-1:exon

TREMTM_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: dnaX
locus tag: TREMTM_RS00760
old locus tag: TRABTM_A_01550
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:NF005942.0
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MNYQVLARKWRPQKFADVVGQKHILTALANSILLGRIHHSYLLSGMRGVGKTTIARLLAKGLNCKIGITDSPCDQCQNCREIAQSCFVDLIEIDAASRTKVEDTRELIDNVQYVPTRGRFKIYIIDEVHMLSRYSFNALLKTLEEPPEHVKFLLATTDPQKIPVTIISRCLQFHLKAIDIEQIRNYLSKILHKENIAVEPQALQLLARAAAGSMRDALSLTDQAILIGQGKISTDTVNIMLGTLNTDQPLTIIESLAKADGGTMLKQLAKYAKSGIDWENLLVEILYLLHRIAIGQLLQDQLKYEENNDIMLRLQKLAQRLSPEELQLYYQTILIGRKELPFAPNPRIGVEITLLRALAFYPNTMQAKIIPASAEKKTSKFSSVINKKISLSRETVTIDGLNKKKTNIDINKNKIIHKIIKKNYNNILTNNILTSNIFLSDRMICAEDQKKKFEIMQISFNSFYRIATAVEEQTVEEQNLNIIQIASANIFVENKILPDDTMHILQARTALLRSKKLKKNKNDQLITLQHKKIANRVLEKLSKFGFNKYNKNNK
SIO_010081: TREMTM_RS00760
subclass of: SO_0000673
so part of: TREMTM_RS00760
location: complement(156148..157812)
location: region:156148-157812:-1
so has part: feature:156148-157812:-1:exon

WP_083172384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156148-157812:-1:exon

TREMTM_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsP
locus tag: TREMTM_RS00765
old locus tag: TRABTM_A_01560
so part of: sequence
location: 158284..158529
location: region:158284-158529:1
so has part: feature:158284-158529:1:exon
subclass of: SO_0000010

position:158284:1
position: 158284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158529:1
position: 158529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158284-158529:1:exon

TREMTM_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsP
locus tag: TREMTM_RS00765
old locus tag: TRABTM_A_01560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209458.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S16
translation: MVTIRLARGGAKKHPFYHIVVTDSRNARDGNFIERIGFLNPIPTGRAVSFFLDLDRIKHWISKGATVSNRVSILIKNAKKA
SIO_010081: TREMTM_RS00765
subclass of: SO_0000673
so part of: TREMTM_RS00765
location: 158284..158529
location: region:158284-158529:1
so has part: feature:158284-158529:1:exon

WP_083172386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158284-158529:1:exon

TREMTM_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rimM
locus tag: TREMTM_RS00770
old locus tag: TRABTM_A_01570
so part of: sequence
location: 158560..159123
location: region:158560-159123:1
so has part: feature:158560-159123:1:exon
subclass of: SO_0000010

position:158560:1
position: 158560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159123:1
position: 159123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158560-159123:1:exon

TREMTM_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rimM
locus tag: TREMTM_RS00770
old locus tag: TRABTM_A_01570
inference: COORDINATES: similar to AA sequence:RefSeq:NP_461605.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006364 - rRNA processing [Evidence IEA]
note: Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome maturation factor RimM
translation: MNKLLSSIITAAQVKPIKPIIIGKIKSAYGIRGQLKVVSFTKETANIFTYQPWFVKKNQWQQIKLESWKLYNKNLIISIINIKNREAAILLTNCEIVIETAQLPELEKGQYYWKDLIGCQVITVNGYNMGKVVNLIETGSNEVLVVKSNPKDAFGIRERLIPFLDIQVIKNVDIMAKFIEVIWDPKF
SIO_010081: TREMTM_RS00770
subclass of: SO_0000673
so part of: TREMTM_RS00770
location: 158560..159123
location: region:158560-159123:1
so has part: feature:158560-159123:1:exon

WP_083172388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158560-159123:1:exon

TREMTM_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: trmD
locus tag: TREMTM_RS00775
old locus tag: TRABTM_A_01580
so part of: sequence
location: 159150..159908
location: region:159150-159908:1
so has part: feature:159150-159908:1:exon
subclass of: SO_0000010

position:159150:1
position: 159150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159908:1
position: 159908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159150-159908:1:exon

TREMTM_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: trmD
locus tag: TREMTM_RS00775
old locus tag: TRABTM_A_01580
EC number: 2.1.1.228
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012989637.1
GO function: GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (guanosine(37)-N1)-methyltransferase TrmD
translation: MWIGVISLFPEMFRVITNYGVTGRAVKNGLLKVQCWSPRDFTDDKHHTVDDRPYGGGPGMLMMVQPLRDAINKAKNHASEGEKVKVIYLSPTGRKLDNLGVSELSYNKKMILVCGRYEGIDERLIATEIDEEWSIGDYVLSGGELAAMVVIDSISRFIPGILGHEYSVKEDSFAKGLLDCPHYTRPKVLDGMAVPPVLLSGNHKEIRRWRLKQNLGRTWLKRPELLEKIAITKEESNLLIEFQQEYQECKLI
SIO_010081: TREMTM_RS00775
subclass of: SO_0000673
so part of: TREMTM_RS00775
location: 159150..159908
location: region:159150-159908:1
so has part: feature:159150-159908:1:exon

WP_083172648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159150-159908:1:exon

TREMTM_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplS
locus tag: TREMTM_RS00780
old locus tag: TRABTM_A_01590
so part of: sequence
location: 159945..160301
location: region:159945-160301:1
so has part: feature:159945-160301:1:exon
subclass of: SO_0000010

position:159945:1
position: 159945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160301:1
position: 160301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159945-160301:1:exon

TREMTM_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplS
locus tag: TREMTM_RS00780
old locus tag: TRABTM_A_01590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004716691.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L19
translation: MSNIINQIEQEQLKQNIPIFRSGDSVEVKVWVIEGSKKRLQAFEGLVIAIRNRGLHSAFTVRKISNGSVVERVFQIHSLVIDSITVKRCGVVRKAKLYYLRKRTGKAARIKERIKRIN
SIO_010081: TREMTM_RS00780
subclass of: SO_0000673
so part of: TREMTM_RS00780
location: 159945..160301
location: region:159945-160301:1
so has part: feature:159945-160301:1:exon

WP_083172390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159945-160301:1:exon

TREMTM_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00785
old locus tag: TRABTM_A_T0200
so part of: sequence
location: 160417..160498
location: region:160417-160498:1
so has part: feature:160417-160498:1:exon
subclass of: SO_0000663

position:160417:1
position: 160417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160498:1
position: 160498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160417-160498:1:exon

TREMTM_RS00785
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00785
old locus tag: TRABTM_A_T0200
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:160451..160453,aa:Leu,seq:caa)
SIO_010081: TREMTM_RS00785
subclass of: SO_0000673
so part of: TREMTM_RS00785
location: 160417..160498
location: region:160417-160498:1
so has part: feature:160417-160498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160417-160498:1:exon

TREMTM_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01600
pseudo: true
so part of: sequence
location: <161165..161266
location: region:161165-161266:1
so has part: feature:161165-161266:1:exon
subclass of: SO_0000010

position:161165:1
position: 161165
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:161266:1
position: 161266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161165-161266:1:exon

TREMTM_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01600
inference: COORDINATES: protein motif:HMM:NF016267.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: TREMTM_RS01600
subclass of: SO_0000673
so part of: TREMTM_RS01600
location: <161165..161266
location: region:161165-161266:1
so has part: feature:161165-161266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161165-161266:1:exon

TREMTM_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00795
old locus tag: TRABTM_A_01600
so part of: sequence
location: 161439..164294
location: region:161439-164294:1
so has part: feature:161439-164294:1:exon
subclass of: SO_0000010

position:161439:1
position: 161439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164294:1
position: 164294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161439-164294:1:exon

TREMTM_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00795
old locus tag: TRABTM_A_01600
EC number: 6.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: valine--tRNA ligase
translation: MEKIYNPKDIEQHLYAKWEHNGYFKPSGNILHDSYCIMIPPPNVTGRLHMGHAFQQVIMDTLIRYQRMQGKNTLWQVGTDHAGIATQMLVERKISEEEKKTCHDYGRDAFTKKIWQWKAQSSSTITYQMRRLGNSVDWERERFTMDDGISNSVKEVFVCLYQEGFIYRGKRLVNWDPKLHTAISDLEVENRELKGSIWHLRYQLADNVRTKDGLDYLVVATTRPETIFGDTGIAVNPADHRYQNLIGKFVILPLLGRRIKILGDDYVDIKKGTGCVKITPAHDFNDYEVGKRHALPMVNILTFDGNIHQEAQVFDTNGKPSQLLSGEIPAAFRGLDLFTARKAIVTELDRLGFIVEVKDHNITVPYSNRGGVVIEPMLTDQWYVRTAPLAKVAIKAVEQGAIKFIPKQYENMYFSWMRDIKDWCISRQLWWGHRIPAWYDIEGKVYVGRNENEVRKMHKLGNKVILYQDEDVLDTWFSSGIWTFSTLGWPENTESLSIFHPTNLVVSGFDIIFFWIARMIMLTMHFIKDKNGRPQVPFKNVYITGLIRDEEGQKMSKSKGNIIDPLDMIDGISLENLLKKRTGNMMNPKLADKIRKSTTKQFPNGIEPHGTDALRLTIIALASTGRDINWDMNRLKGYYHFCNKLWNASRFVLINTEEQDCGFYGGYKTLSIADRWIMTKFNNTVKLFRDALNNYRFDLAAGILYEFTWNQFCGWYLELTKPIISCGSDAELRGTRHTLVKVLEALLRLAHPILPFITETIWQRVKMLTRKQGPTIMLQPFPDYDTKIADVNALTDIEWIKQTIIAVRNLRTKMNIAPNKQLSVLFRQASSAVVHRIHNNMKFIINIAKLDSITILPVNDKGPISVTQIIEGAELLIPIAGIINKNTELERLEKEKKCIEREIDRITTKLSNKKFIDHAPEKVVAKELEKLKKYHKYRTKLLEQHTLIATS
SIO_010081: TREMTM_RS00795
subclass of: SO_0000673
so part of: TREMTM_RS00795
location: 161439..164294
location: region:161439-164294:1
so has part: feature:161439-164294:1:exon

WP_083172392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161439-164294:1:exon

TREMTM_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: argF
locus tag: TREMTM_RS00800
old locus tag: TRABTM_A_01610
so part of: sequence
location: 164364..165377
location: region:164364-165377:1
so has part: feature:164364-165377:1:exon
subclass of: SO_0000010

position:164364:1
position: 164364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165377:1
position: 165377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164364-165377:1:exon

TREMTM_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: argF
locus tag: TREMTM_RS00800
old locus tag: TRABTM_A_01610
EC number: 2.1.3.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012105725.1
GO function: GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO process: GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ornithine carbamoyltransferase
translation: MNKLVKRNFLRLMDFTSAEINQLLALATSLKYQKRTKCEIPLLAGKNIALIFEKDSTRTRCSFEVAAFDQGARVTYLGLNGSHIGYKESIKDSAIILGRMYDAIQYRGYDQSIVEKIALYAGVPVWNGLTNEFHPTQVLADMLTMQEFLPEKKFNKMKLAYVGDARNNISNTLLEAAALTGINLRIIAPSTFWPNYDLVVSCRKLAHKNGGNITLTQDIATGVKNVDFIYTDVWVSMGEDKNVWQERIEMLRSYQINMTMLHQTGNSKVKFLHCLPAFHNKQTIIGKQLIEQYGLVGGIEVTNDVFESPHSVVFDQAENRLHTIKAVMVATLVTNIN
SIO_010081: TREMTM_RS00800
subclass of: SO_0000673
so part of: TREMTM_RS00800
location: 164364..165377
location: region:164364-165377:1
so has part: feature:164364-165377:1:exon

WP_083172650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164364-165377:1:exon

TREMTM_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: asd
locus tag: TREMTM_RS00805
old locus tag: TRABTM_A_01620
so part of: sequence
location: 165514..166620
location: region:165514-166620:1
so has part: feature:165514-166620:1:exon
subclass of: SO_0000010

position:165514:1
position: 165514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166620:1
position: 166620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165514-166620:1:exon

TREMTM_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: asd
locus tag: TREMTM_RS00805
old locus tag: TRABTM_A_01620
EC number: 1.2.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975583.1
GO function: GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate-semialdehyde dehydrogenase
translation: MKNVGFIGWRGLVGSVLMQRMIEEHDFDHIRPVFFSSTQYGQSAPLVNSYHNRLHNAMDLKMLRDLDIIVTCQGGDYTKEIYPQLRKIGWQGYWIDAASSLRMYDDAIIILDPINKSLIQQGLNQGIKTFVGGNCTVSLMLMALGGLFANNLVEWISVATYQAASGGGARHMRELLVQMVQFYDTIAKPLQDPAFSILEIERRFTELTRSGTLMTDNFGVPLVGSLIPWIDKQLENGQSREEWKGQAETNKILNTSKLIPIDGLCVRIGALRCHSQAFTLKLKKNVSLAEIEILLATHNEWVSVVPNDRELSIQELTPAVVTGTLKIPVGRLRKLNIGPEYISAFTVGDQLLWGAAEPLRRMLRQLSN
SIO_010081: TREMTM_RS00805
subclass of: SO_0000673
so part of: TREMTM_RS00805
location: 165514..166620
location: region:165514-166620:1
so has part: feature:165514-166620:1:exon

WP_083172394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165514-166620:1:exon

TREMTM_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00810
old locus tag: TRABTM_A_T0210
so part of: sequence
location: complement(166635..166722)
location: region:166635-166722:-1
so has part: feature:166635-166722:-1:exon
subclass of: SO_0000663

position:166635:-1
position: 166635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166722:-1
position: 166722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166635-166722:-1:exon

TREMTM_RS00810
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00810
old locus tag: TRABTM_A_T0210
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(166686..166688),aa:Ser,seq:gga)
SIO_010081: TREMTM_RS00810
subclass of: SO_0000673
so part of: TREMTM_RS00810
location: complement(166635..166722)
location: region:166635-166722:-1
so has part: feature:166635-166722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166635-166722:-1:exon

TREMTM_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01540
so part of: sequence
location: 166877..167050
location: region:166877-167050:1
so has part: feature:166877-167050:1:exon
subclass of: SO_0000010

position:166877:1
position: 166877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167050:1
position: 167050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166877-167050:1:exon

TREMTM_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQFIILLQDNLLSNEMNIHGEKIQRAYSYVNALQNYKLEFYIISVPNGKLSHALWQ
SIO_010081: TREMTM_RS01540
subclass of: SO_0000673
so part of: TREMTM_RS01540
location: 166877..167050
location: region:166877-167050:1
so has part: feature:166877-167050:1:exon

WP_156763240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166877-167050:1:exon

TREMTM_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01605
so part of: sequence
location: 167247..167381
location: region:167247-167381:1
so has part: feature:167247-167381:1:exon
subclass of: SO_0000010

position:167247:1
position: 167247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167381:1
position: 167381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167247-167381:1:exon

TREMTM_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRISCEKVPGYLTGRIPSLIANGSLELAVDLKLDIENSHIMCKS
SIO_010081: TREMTM_RS01605
subclass of: SO_0000673
so part of: TREMTM_RS01605
location: 167247..167381
location: region:167247-167381:1
so has part: feature:167247-167381:1:exon

WP_269446328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167247-167381:1:exon

TREMTM_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00820
old locus tag: TRABTM_A_T0220
so part of: sequence
location: complement(167624..167709)
location: region:167624-167709:-1
so has part: feature:167624-167709:-1:exon
subclass of: SO_0000663

position:167624:-1
position: 167624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167709:-1
position: 167709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167624-167709:-1:exon

TREMTM_RS00820
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00820
old locus tag: TRABTM_A_T0220
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(167673..167675),aa:Leu,seq:taa)
SIO_010081: TREMTM_RS00820
subclass of: SO_0000673
so part of: TREMTM_RS00820
location: complement(167624..167709)
location: region:167624-167709:-1
so has part: feature:167624-167709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167624-167709:-1:exon

TREMTM_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00825
old locus tag: TRABTM_A_T0230
so part of: sequence
location: complement(167726..167796)
location: region:167726-167796:-1
so has part: feature:167726-167796:-1:exon
subclass of: SO_0000663

position:167726:-1
position: 167726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167796:-1
position: 167796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167726-167796:-1:exon

TREMTM_RS00825
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00825
old locus tag: TRABTM_A_T0230
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(167762..167764),aa:Cys,seq:gca)
SIO_010081: TREMTM_RS00825
subclass of: SO_0000673
so part of: TREMTM_RS00825
location: complement(167726..167796)
location: region:167726-167796:-1
so has part: feature:167726-167796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167726-167796:-1:exon

TREMTM_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00830
old locus tag: TRABTM_A_T0240
so part of: sequence
location: complement(167808..167882)
location: region:167808-167882:-1
so has part: feature:167808-167882:-1:exon
subclass of: SO_0000663

position:167808:-1
position: 167808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167882:-1
position: 167882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167808-167882:-1:exon

TREMTM_RS00830
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00830
old locus tag: TRABTM_A_T0240
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(167848..167850),aa:Gly,seq:gcc)
SIO_010081: TREMTM_RS00830
subclass of: SO_0000673
so part of: TREMTM_RS00830
location: complement(167808..167882)
location: region:167808-167882:-1
so has part: feature:167808-167882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167808-167882:-1:exon

TREMTM_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpmF
locus tag: TREMTM_RS00835
old locus tag: TRABTM_A_01650
so part of: sequence
location: 168226..168402
location: region:168226-168402:1
so has part: feature:168226-168402:1:exon
subclass of: SO_0000010

position:168226:1
position: 168226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168402:1
position: 168402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168226-168402:1:exon

TREMTM_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpmF
locus tag: TREMTM_RS00835
old locus tag: TRABTM_A_01650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011147057.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L32
translation: MAVQQNKHTRSKRGMRRSHDALITSTLTIDKTSGEIHRLHHITAKGFYRGRKVISISK
SIO_010081: TREMTM_RS00835
subclass of: SO_0000673
so part of: TREMTM_RS00835
location: 168226..168402
location: region:168226-168402:1
so has part: feature:168226-168402:1:exon

WP_083172396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168226-168402:1:exon

TREMTM_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01545
old locus tag: TRABTM_A_01651
pseudo: true
so part of: sequence
location: <168416..168582
location: region:168416-168582:1
so has part: feature:168416-168582:1:exon
subclass of: SO_0000010

position:168416:1
position: 168416
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:168582:1
position: 168582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168416-168582:1:exon

TREMTM_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01545
old locus tag: TRABTM_A_01651
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SDR family oxidoreductase
SIO_010081: TREMTM_RS01545
subclass of: SO_0000673
so part of: TREMTM_RS01545
location: <168416..168582
location: region:168416-168582:1
so has part: feature:168416-168582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:168416-168582:1:exon

TREMTM_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: acpP
locus tag: TREMTM_RS00845
old locus tag: TRABTM_A_01660
so part of: sequence
location: 168693..168926
location: region:168693-168926:1
so has part: feature:168693-168926:1:exon
subclass of: SO_0000010

position:168693:1
position: 168693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168926:1
position: 168926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168693-168926:1:exon

TREMTM_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: acpP
locus tag: TREMTM_RS00845
old locus tag: TRABTM_A_01660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016940845.1
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl carrier protein
translation: MSTIEDSVKEIIVDQLGVKKEEVINSASFVDDLGADSLDTVELIMALEEEFDIEITDEEAEKITTVQAAIDFIQYNQ
SIO_010081: TREMTM_RS00845
subclass of: SO_0000673
so part of: TREMTM_RS00845
location: 168693..168926
location: region:168693-168926:1
so has part: feature:168693-168926:1:exon

WP_083172398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168693-168926:1:exon

TREMTM_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ligA
locus tag: TREMTM_RS00850
old locus tag: TRABTM_A_01670
so part of: sequence
location: 169040..170809
location: region:169040-170809:1
so has part: feature:169040-170809:1:exon
subclass of: SO_0000010

position:169040:1
position: 169040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170809:1
position: 170809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169040-170809:1:exon

TREMTM_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ligA
locus tag: TREMTM_RS00850
old locus tag: TRABTM_A_01670
EC number: 6.5.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015580571.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent DNA ligase LigA
translation: MEKIEQHIIKLREKLQHWEYLYYLENYPEVPDIEYDIVMEELRYLEYKRPDLLTIDSPSQRVGVKVTNKFGKVHHEVPMLSLDNVFDNSGFLRFDNRLRKRLKYNNDIVYCCELKLDGLAVSIIYDSGVLVQAATRGDGNTGENITANIRTISTIPLSLKNYDNWPSLIEIRGEVFMSQAGFLQLNTMAKKEGSKLFSNPRNAAAGSLRQLDPAITACRPLIFNCYGVGLVKEGVLLSDSHWELLQQLKAWGIPVSNYSRRCIGSAEVLDFYQKANKNRSLFGFDIDGVVIKVDSLLLQQRLGFISRAPRWAIAYKLPAHEQLTKVQKVDFQVGRTGIITPVARLKPVLVSGAIVSNATLHNINEVKRLGIMIGDTVVVRRAGNVIPQIIGIVSFKRPKKALQVIFPSQCPICGSKIEHIEGNALLRCSAGLFCAAQRKEAIKRFVSRLAMDIEGMGDKIIDQLVKRHLVKTPADLFRLNEDILIKLERIGPKSAKKLLQSLKISKKTTLARFIYALGIYEVGEATAANLAASYKTLDALITADLDSLKENIGKIVATHVCNFFKKSYNLNVIQDLLNPPICISISEKK
SIO_010081: TREMTM_RS00850
subclass of: SO_0000673
so part of: TREMTM_RS00850
location: 169040..170809
location: region:169040-170809:1
so has part: feature:169040-170809:1:exon

WP_083172400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169040-170809:1:exon

TREMTM_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: mutH
locus tag: TREMTM_RS00855
old locus tag: TRABTM_A_01680
so part of: sequence
location: complement(170877..171593)
location: region:170877-171593:-1
so has part: feature:170877-171593:-1:exon
subclass of: SO_0000010

position:170877:-1
position: 170877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171593:-1
position: 171593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170877-171593:-1:exon

TREMTM_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: mutH
locus tag: TREMTM_RS00855
old locus tag: TRABTM_A_01680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411711.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair endonuclease MutH
translation: MNTKIKNFIPYTFPLDPPKDENALLHRANSLFGYTLGELSIYAKLEIPPNLKRNKGWIGMLLERYLGASAKSKSEQDFASIGIELKTIPVDISRRPLETTFICVAPLTGNSGVTWETSYVRYKLSRVLWIPIEGHRTIPLAMRRIGVPLLWSLNAKEELQLKSDWEELMDLIVLGKVENITAHHGDMLHLRPKASNGKALTAAIGKFGQPILTMPLGFYLRKKFTAKILERYSIYYLL
SIO_010081: TREMTM_RS00855
subclass of: SO_0000673
so part of: TREMTM_RS00855
location: complement(170877..171593)
location: region:170877-171593:-1
so has part: feature:170877-171593:-1:exon

WP_083172402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170877-171593:-1:exon

TREMTM_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rppH
locus tag: TREMTM_RS00860
old locus tag: TRABTM_A_01690
so part of: sequence
location: 171813..172334
location: region:171813-172334:1
so has part: feature:171813-172334:1:exon
subclass of: SO_0000010

position:171813:1
position: 171813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172334:1
position: 172334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171813-172334:1:exon

TREMTM_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rppH
locus tag: TREMTM_RS00860
old locus tag: TRABTM_A_01690
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:NP_461921.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA pyrophosphohydrolase
translation: MIDGDGYRQNVGIVICNLDRKVLWARRYRHHSWQFPQGGINDCETAEQAMYRELFEEVGLSHKDVRVLASTHNWIRYKLPKRLVRWDMKPVCIGQKQKWFLLQLVCSDRDINMRIGGIPEFDCWRWVNFWYPVRQIIYFKRGVYRRVMNEFYRVVMPLHNNVVPCLKQAHLMQ
SIO_010081: TREMTM_RS00860
subclass of: SO_0000673
so part of: TREMTM_RS00860
location: 171813..172334
location: region:171813-172334:1
so has part: feature:171813-172334:1:exon

WP_083172404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171813-172334:1:exon

TREMTM_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: truA
locus tag: TREMTM_RS00865
old locus tag: TRABTM_A_01700
so part of: sequence
location: complement(172577..173356)
location: region:172577-173356:-1
so has part: feature:172577-173356:-1:exon
subclass of: SO_0000010

position:172577:-1
position: 172577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173356:-1
position: 173356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172577-173356:-1:exon

TREMTM_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: truA
locus tag: TREMTM_RS00865
old locus tag: TRABTM_A_01700
EC number: 5.4.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017345406.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(38-40) synthase TruA
translation: MKLVLGIEYNGSAYYGWQRQKKVHNVQTCLERAISNVANELVTVYCAGRTDTGVHATGQVVHFETKVCRSDAAWTFGVNANLPDDIAVRWVTQVADNFHARFSATSRRYRYIIYNYRLRTALLARRITCYYHHLDAPSMARAGQFLIGEHDFTSFSTKECQSRSSWRNVHHLYVNRYGQYIIFDIKANAFLHHMVRNIVGSLLEVGCGKKHESWISELITCRDKTQAGATSKAEGLYLIEVDYPSHFNLPKSSDGPLFF
SIO_010081: TREMTM_RS00865
subclass of: SO_0000673
so part of: TREMTM_RS00865
location: complement(172577..173356)
location: region:172577-173356:-1
so has part: feature:172577-173356:-1:exon

WP_083172406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172577-173356:-1:exon

TREMTM_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: gyrA
locus tag: TREMTM_RS00870
old locus tag: TRABTM_A_01710
pseudo: true
so part of: sequence
location: 173657..>176167
location: region:173657-176167:1
so has part: feature:173657-176167:1:exon
subclass of: SO_0000010

position:173657:1
position: 173657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176167:1
position: 176167
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173657-176167:1:exon

TREMTM_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: gyrA
locus tag: TREMTM_RS00870
old locus tag: TRABTM_A_01710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210821.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit A
SIO_010081: TREMTM_RS00870
subclass of: SO_0000673
so part of: TREMTM_RS00870
location: 173657..>176167
location: region:173657-176167:1
so has part: feature:173657-176167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173657-176167:1:exon

TREMTM_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00875
old locus tag: TRABTM_A_T0250
so part of: sequence
location: 176308..176392
location: region:176308-176392:1
so has part: feature:176308-176392:1:exon
subclass of: SO_0000663

position:176308:1
position: 176308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176392:1
position: 176392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176308-176392:1:exon

TREMTM_RS00875
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00875
old locus tag: TRABTM_A_T0250
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:176342..176344,aa:Leu,seq:tag)
SIO_010081: TREMTM_RS00875
subclass of: SO_0000673
so part of: TREMTM_RS00875
location: 176308..176392
location: region:176308-176392:1
so has part: feature:176308-176392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176308-176392:1:exon

TREMTM_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00880
old locus tag: TRABTM_A_T0260
so part of: sequence
location: 176435..176506
location: region:176435-176506:1
so has part: feature:176435-176506:1:exon
subclass of: SO_0000663

position:176435:1
position: 176435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176506:1
position: 176506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176435-176506:1:exon

TREMTM_RS00880
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00880
old locus tag: TRABTM_A_T0260
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:176467..176469,aa:Gln,seq:ttg)
SIO_010081: TREMTM_RS00880
subclass of: SO_0000673
so part of: TREMTM_RS00880
location: 176435..176506
location: region:176435-176506:1
so has part: feature:176435-176506:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176435-176506:1:exon

TREMTM_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00885
old locus tag: TRABTM_A_T0270
so part of: sequence
location: 176587..176660
location: region:176587-176660:1
so has part: feature:176587-176660:1:exon
subclass of: SO_0000663

position:176587:1
position: 176587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176660:1
position: 176660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176587-176660:1:exon

TREMTM_RS00885
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00885
old locus tag: TRABTM_A_T0270
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:176621..176623,aa:Met,seq:cat)
SIO_010081: TREMTM_RS00885
subclass of: SO_0000673
so part of: TREMTM_RS00885
location: 176587..176660
location: region:176587-176660:1
so has part: feature:176587-176660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176587-176660:1:exon

TREMTM_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00890
old locus tag: TRABTM_A_T0280
so part of: sequence
location: 176671..176742
location: region:176671-176742:1
so has part: feature:176671-176742:1:exon
subclass of: SO_0000663

position:176671:1
position: 176671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176742:1
position: 176742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176671-176742:1:exon

TREMTM_RS00890
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00890
old locus tag: TRABTM_A_T0280
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:176703..176705,aa:Gln,seq:ctg)
SIO_010081: TREMTM_RS00890
subclass of: SO_0000673
so part of: TREMTM_RS00890
location: 176671..176742
location: region:176671-176742:1
so has part: feature:176671-176742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176671-176742:1:exon

TREMTM_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ybeY
locus tag: TREMTM_RS00895
old locus tag: TRABTM_A_01740
so part of: sequence
location: 176848..177309
location: region:176848-177309:1
so has part: feature:176848-177309:1:exon
subclass of: SO_0000010

position:176848:1
position: 176848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177309:1
position: 177309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176848-177309:1:exon

TREMTM_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ybeY
locus tag: TREMTM_RS00895
old locus tag: TRABTM_A_01740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975673.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rRNA maturation RNase YbeY
translation: MSQVILNFQLACDNASGIPEKRDFIRWLKGALLLFRDYYEVTIRLVNEDEIHKLNMTYRGKNRPTNILSFKFESTSKVNLHFLGDLVICSQIVKREAQKQKKAIKAHWAHIVIHGSLHLLGYNHLLENEALVMESLETEIMQKFGYPDPYLGR
SIO_010081: TREMTM_RS00895
subclass of: SO_0000673
so part of: TREMTM_RS00895
location: 176848..177309
location: region:176848-177309:1
so has part: feature:176848-177309:1:exon

WP_083172410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176848-177309:1:exon

TREMTM_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: leuS
locus tag: TREMTM_RS00900
old locus tag: TRABTM_A_01750
so part of: sequence
location: 177637..180216
location: region:177637-180216:1
so has part: feature:177637-180216:1:exon
subclass of: SO_0000010

position:177637:1
position: 177637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180216:1
position: 180216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177637-180216:1:exon

TREMTM_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: leuS
locus tag: TREMTM_RS00900
old locus tag: TRABTM_A_01750
EC number: 6.1.1.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucine--tRNA ligase
translation: MQEIYRPEEIESTVQQYWHKNNTFMVTEDPVKEKYYCLSMLPYPSGCLHMGHVRNYTIGDVIARYQRMLGKNVLHPIGWDAFGLPAEIAAVKNNMAPSRWTYANINNMKKQLKLLGFGYDWSREITTCSPEYYRWEQWFFIYLYKKGLVYKKNAAVNWCPQDKTVLANEQVIEGCCWRCDTQVERKEIPQWFIKITDYADELLQDLDKLDGWFEQVKTMQRNWIGRSEGIEITFQVVDSEDKLTIYTTRKDTFMGVTYIAIAADHHLSLQAATANSALADFIHKCRTTTVLEVDVAKMEKKGMATGLYVMHPFNGEILPVWVANFVLMDYGTSAIMAVPGHDQRDFEFARKYSLPIKPVILNADGSKPDISLKAMTLKGVLFNSGEFDGLDFKSGSRAIADALVARGIGKRKINYRLHDWVVSRQRYWGAPIPMMTLENGTVVPTPEDQLPVILPEYVMIDGISNPLKEDPSWFRTTYHGKPALRETDTFDTFMESSWYYARYTCPSYKSGMLDYTAAKYWLPVDQYIGGIEHAVMHLMYFRFYHKLLRDAGIVISDEPAKRLLCQGMVLADAFYYITANGERIWVSPLEISIERDNKGRIIKATDVSGRDLVYAGMSKMSKSKNNGINPQEIVEKYGADTVRLFMMFASPAEMTLEWHKSGIEGSNRFIKRFWKLAYEHKQRGSSVEDLNIMSLNKDQKALRREVHKTIAKVTDDIGRRQTFNTAIAAIMELINKLIHVDQHTEQDHALMHESLMAVVRMLYPFIPHTCFMIWQSLGGEGDIDNAQWPVADEAAIVEDAKLIVIQVNGKFRGRIILPADADETLVRDRAEYMVAKSIYGKNVHKVIYIPGKLLNLVVG
SIO_010081: TREMTM_RS00900
subclass of: SO_0000673
so part of: TREMTM_RS00900
location: 177637..180216
location: region:177637-180216:1
so has part: feature:177637-180216:1:exon

WP_083172412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177637-180216:1:exon

TREMTM_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: holA
locus tag: TREMTM_RS00905
old locus tag: TRABTM_A_01760
so part of: sequence
location: 180309..181361
location: region:180309-181361:1
so has part: feature:180309-181361:1:exon
subclass of: SO_0000010

position:180309:1
position: 180309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181361:1
position: 181361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180309-181361:1:exon

TREMTM_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: holA
locus tag: TREMTM_RS00905
old locus tag: TRABTM_A_01760
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410664.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit delta
translation: MIRLYAEQLNLQLSKSLSTCYLLFGNEPLLLQESQDLICKIARKQQFDEYFSIMLDAHTDWYSIFSLCKERSLFSRRQVLLLLLPEESIKSDMGDNLLHLSSLLHDDLLLIIRGTNITSTLEKSAWFKELKSIAVLVICMTPEQTQLPQWVMKRANSMKLKLDNAACQLLCYCYEGNLPALVQVLEMLCLIYPDRNITFPRVEITVNDSSHFTIFNLVDAVLAGKSKRAIHILQQLQLEATDNTIIILLRSIQREIMLLLMLKRHTAASSRDMLKLWSKRKLLLNQAVERLTMLQLRNAIALAAKIEIAIKQDYKDYVWSDFNALILILCSKLMPEAMFSGSISRFQIKI
SIO_010081: TREMTM_RS00905
subclass of: SO_0000673
so part of: TREMTM_RS00905
location: 180309..181361
location: region:180309-181361:1
so has part: feature:180309-181361:1:exon

WP_083172414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180309-181361:1:exon

TREMTM_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01550
so part of: sequence
location: 181585..181737
location: region:181585-181737:1
so has part: feature:181585-181737:1:exon
subclass of: SO_0000010

position:181585:1
position: 181585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181737:1
position: 181737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181585-181737:1:exon

TREMTM_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGSNAQITVSADEIWLQNLPEFTQGHAGNANHLLHSGHCLYVLLDLRRRS
SIO_010081: TREMTM_RS01550
subclass of: SO_0000673
so part of: TREMTM_RS01550
location: 181585..181737
location: region:181585-181737:1
so has part: feature:181585-181737:1:exon

WP_156763241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181585-181737:1:exon

TREMTM_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00910
old locus tag: TRABTM_A_01780
pseudo: true
so part of: sequence
location: 182065..182666
location: region:182065-182666:1
so has part: feature:182065-182666:1:exon
subclass of: SO_0000010

position:182065:1
position: 182065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182666:1
position: 182666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182065-182666:1:exon

TREMTM_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00910
old locus tag: TRABTM_A_01780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: TREMTM_RS00910
subclass of: SO_0000673
so part of: TREMTM_RS00910
location: 182065..182666
location: region:182065-182666:1
so has part: feature:182065-182666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182065-182666:1:exon

TREMTM_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00915
old locus tag: TRABTM_A_01800
so part of: sequence
location: complement(182724..183467)
location: region:182724-183467:-1
so has part: feature:182724-183467:-1:exon
subclass of: SO_0000010

position:182724:-1
position: 182724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183467:-1
position: 183467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182724-183467:-1:exon

TREMTM_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00915
old locus tag: TRABTM_A_01800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410648.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF481 domain-containing protein
translation: MLRKKKYKVFFSLITFNMLLLASFTVFANTNYQKNIEGNVQTIYNWQSSNSSNIRNSYLAASTRITWFQQPKSFISWKKEYHNFYDNHLLFKKCHDIAFSKKIILQKFFFANGSWLSDRYNGYRSLDTLVAGCGFQILTGPSYTIRMEAGPGINYNEYQNGENTTKAIGYAAVSYSYKLTKNANFLQGLSIFANNNTTFNSETGLNIDINEHFSLKVAYNVICNKEQPEASQNTNTRTSVSLIYKMQ
SIO_010081: TREMTM_RS00915
subclass of: SO_0000673
so part of: TREMTM_RS00915
location: complement(182724..183467)
location: region:182724-183467:-1
so has part: feature:182724-183467:-1:exon

WP_083172416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182724-183467:-1:exon

TREMTM_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00920
pseudo: true
so part of: sequence
location: 183660..184082
location: region:183660-184082:1
so has part: feature:183660-184082:1:exon
subclass of: SO_0000010

position:183660:1
position: 183660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184082:1
position: 184082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183660-184082:1:exon

TREMTM_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004130478.1
GO function: GO:0010181 - FMN binding [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flavodoxin domain-containing protein
SIO_010081: TREMTM_RS00920
subclass of: SO_0000673
so part of: TREMTM_RS00920
location: 183660..184082
location: region:183660-184082:1
so has part: feature:183660-184082:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183660-184082:1:exon

TREMTM_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: glnS
locus tag: TREMTM_RS00925
old locus tag: TRABTM_A_01820
so part of: sequence
location: complement(184108..185799)
location: region:184108-185799:-1
so has part: feature:184108-185799:-1:exon
subclass of: SO_0000010

position:184108:-1
position: 184108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185799:-1
position: 185799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184108-185799:-1:exon

TREMTM_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: glnS
locus tag: TREMTM_RS00925
old locus tag: TRABTM_A_01820
EC number: 6.1.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015376953.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine--tRNA ligase
translation: MSNDRDNNTNTCTTNFIRKIIDEDLASGKQKSVYTRFPPEPNGYLHIGHAKSICLNFGIAHDYRGKCNLRFDDTNPVKEHLEYIKSIKYDVQWLGFKWSGKIRYSSDYFDRIYEYALELISKGLAYVDQLSPEEIHDYRGTLTLPGKNSPYRNQTIEENLSLFVKMRNGEFEEGKACLRAIIDMASPFMVMRDPVLYRIKFVNHHHTGDKWCIYPMYDFTHCISDAIEGITHSLCTLEFQDNRRLYDWILDNITIDVHPRQYEFSRLNIEYTILSKRKLNLLVMKKIVDGWDDPRMPTLSGFRRRGYTAASIREFCHRINITKKDNNVEIATLESCIREELNNNAPRAMAIINPVRVIIESLPLEYEQNIVMPNHPNRPEMGNRQVAFSREIYIDQADFREENNNKQYKRLVLGKEVRLRYSYVIKAERVEKNFQGKITTIFCCHDPSTFNKNPGNNRKVKGVIHWVSATRSLAAEFRLYNRLFNNVNPTTAEDFISTLNPDSLVIRYGFVESGILAADIGKPFQFEREGYFYADSRYFSHYYPVFNRTVKLRDTLKVESTLK
SIO_010081: TREMTM_RS00925
subclass of: SO_0000673
so part of: TREMTM_RS00925
location: complement(184108..185799)
location: region:184108-185799:-1
so has part: feature:184108-185799:-1:exon

WP_083172418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184108-185799:-1:exon

TREMTM_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: eno
locus tag: TREMTM_RS00930
old locus tag: TRABTM_A_01830
so part of: sequence
location: complement(186021..187319)
location: region:186021-187319:-1
so has part: feature:186021-187319:-1:exon
subclass of: SO_0000010

position:186021:-1
position: 186021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187319:-1
position: 187319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186021-187319:-1:exon

TREMTM_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: eno
locus tag: TREMTM_RS00930
old locus tag: TRABTM_A_01830
EC number: 4.2.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012005243.1
GO function: GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphopyruvate hydratase
translation: MSRITKIIGREIIDSRGNPTVEVEVHLNGGFVGLAAAPSGASTGSREALELRDGNMSRFLGKGVTKAVDAVNGPLANALLGKNARDQVILDKTMIDMDGTENKSKFGSNAIIAVSLAAAKAAAVSKRMPLYEHIADINGTQGKFSMPLPMINIINGGKHADNNIDIQEFMIQPVGAKNIKEAVRMGSEVFQNLAKVLKSKGMNTAVGDEGGYAPNLESNAAALAIIKESVDKSGYVLGKDITLAIDCAASEFFEEYTGNYNLKGEGKIFTSKEFTHYLEDLTKQYPIVSIEDGMSESDWNGFAYQTKILGGKIQLVGDDLFVTNTKILKDGIDKGIANSILINFNQSGSLTETLAAIQMAKDAGYTTVISHRSGETEDATIADLAVGTSAGQIKTGSMSRSDRVAKYNQLLRIEEALNGNASFNFLSKIKKS
SIO_010081: TREMTM_RS00930
subclass of: SO_0000673
so part of: TREMTM_RS00930
location: complement(186021..187319)
location: region:186021-187319:-1
so has part: feature:186021-187319:-1:exon

WP_083172420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186021-187319:-1:exon

TREMTM_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: lepA
locus tag: TREMTM_RS00935
old locus tag: TRABTM_A_01840
so part of: sequence
location: 187903..189702
location: region:187903-189702:1
so has part: feature:187903-189702:1:exon
subclass of: SO_0000010

position:187903:1
position: 187903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189702:1
position: 189702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187903-189702:1:exon

TREMTM_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: lepA
locus tag: TREMTM_RS00935
old locus tag: TRABTM_A_01840
EC number: 3.6.5.n1
inference: COORDINATES: similar to AA sequence:RefSeq:NP_311462.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor 4
translation: MKNIRNFSIIAHIDHGKSTLSDCFIKICGGLSKYQMDDKVLYPMELERERGITIKSRSVMLNYKALNGQYYQLNFIDTPGHVDFLYEVSRSLAACEGALLLVDAGQGVEAQTLANCYTALEMNLEVVPVLNKIDLPFANPDLVAHEIEDIIGIDATDAVRCSAKTGLGVFDVLERVVRDIPPPKGDPSISLQALIIDSWFDNYLGVVSLVRIKNGTLRKGDKIKVMSTCKIYCVASIGVFTPKRIELAVLNCGEVGWLVCAIKDIHGAPVGDTLTFAHQPADKVLPGFKKVKPQVYTGLFPMSSEDYELFRDALSKLSLNDASLFYEPENSTALGFGFRCGFLGLLHMEIIKERLKREYDLDIITTAPTVIYEVLTTDNKKIYVDSPSKLPTMNNIAEIREPIAECHMLLPNNYLGRIINLCIEKRGVQINMVYYGNNVALTYDIPMNEVVFDFFDRIKATSSGYASLEYGFKRFQTSDMVRIDILINGQRVDALSLIIHRNNILYRGNEFVDQLKKMIPRQQFDIKIQAAIGKNIIASSTIKQMRKNVIAKCYGGDVSRKKKLLQKQKEGKKRMKHVGNVKLPKEVFLAFLQIGKKNK
SIO_010081: TREMTM_RS00935
subclass of: SO_0000673
so part of: TREMTM_RS00935
location: 187903..189702
location: region:187903-189702:1
so has part: feature:187903-189702:1:exon

WP_083172422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187903-189702:1:exon

TREMTM_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: lepB
locus tag: TREMTM_RS00940
old locus tag: TRABTM_A_01850
so part of: sequence
location: 189721..190701
location: region:189721-190701:1
so has part: feature:189721-190701:1:exon
subclass of: SO_0000010

position:189721:1
position: 189721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190701:1
position: 190701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189721-190701:1:exon

TREMTM_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: lepB
locus tag: TREMTM_RS00940
old locus tag: TRABTM_A_01850
EC number: 3.4.21.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006327380.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase I
translation: MTNDTFSLFLAITTLITGIIWFLTKLLPFRCTNTSKQQRIFFAKKTSDNNLINVDLRNTCTLFFPVLLVVFLVRSFIFEPFQISSGSMMPTLLLGDFIFVEKFYYGIKNPITQKTLIKFFSPKRGDVVVFKYPIDPKINYIKRVVGLPGDLIIYDSVNKQLKVHPFGNLKEQKFVPSLPIAYSKITYSDFVQIFDLNKKINSLIMQVPINNQVPINNNINKGGIRLMQNKESLGSLVYNILILPGSKDQLINYYQHNGCSIAKWVVPPGEYFMMGDNRDNSADSRYWGFVPEKNIVGKATAILISFDIQKEQWPPIIRFNRIGSIN
SIO_010081: TREMTM_RS00940
subclass of: SO_0000673
so part of: TREMTM_RS00940
location: 189721..190701
location: region:189721-190701:1
so has part: feature:189721-190701:1:exon

WP_083172424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189721-190701:1:exon

TREMTM_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rnc
locus tag: TREMTM_RS00945
old locus tag: TRABTM_A_01860
so part of: sequence
location: 190822..191502
location: region:190822-191502:1
so has part: feature:190822-191502:1:exon
subclass of: SO_0000010

position:190822:1
position: 190822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191502:1
position: 191502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190822-191502:1:exon

TREMTM_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rnc
locus tag: TREMTM_RS00945
old locus tag: TRABTM_A_01860
EC number: 3.1.26.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1
GO function: GO:0004525 - ribonuclease III activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease III
translation: MDLKLLNSLQKKIGYFFQKHELLFKALTHRSANINHNERLEFLGDSILNYVIAHAIYQRFPYADEGNMSRMRATLVRGNTLTEIAKEFNIGNCLILGPGELKSGGFYRESILANTVEALFGSVFLDSDIQTVEKIILKLYNTRLTKISTVDTQKDSKTRLQEYLQRRHLPLPIYMMVQGPCNTPDLDFIIHCKVSGLAQPVIGNGLSRRKAEHNAAKQALKILNIE
SIO_010081: TREMTM_RS00945
subclass of: SO_0000673
so part of: TREMTM_RS00945
location: 190822..191502
location: region:190822-191502:1
so has part: feature:190822-191502:1:exon

WP_083172426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190822-191502:1:exon

TREMTM_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: era
locus tag: TREMTM_RS00950
old locus tag: TRABTM_A_01870
so part of: sequence
location: 191499..192389
location: region:191499-192389:1
so has part: feature:191499-192389:1:exon
subclass of: SO_0000010

position:191499:1
position: 191499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192389:1
position: 192389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191499-192389:1:exon

TREMTM_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: era
locus tag: TREMTM_RS00950
old locus tag: TRABTM_A_01870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010302495.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase Era
translation: MKKYCGFVAIVGRSNVGKSTLLNKLLKQKISITSSKPQTTRYKIMGINTVDPYQTIYLDTPGIHIKEKKEINFLMNRVATSSISDVEIVIFVVEGTKWMVDDEIVINKLQHISCPIILAINKIDNIINKKHLLPHIKLLSSKKIHFHDIVPISSKNGMNINILANIVRKLLPESIYYFPKNYITDRSKRFRASEIIREILINFLEKELPYSITVEIEKFQYNDIGVYDIHGIIFVERISQKKIVIGNKGSKIKIISVKSKKELEFRLDTKVNLKLWVKVKSGWTDNQFTLRSLGYN
SIO_010081: TREMTM_RS00950
subclass of: SO_0000673
so part of: TREMTM_RS00950
location: 191499..192389
location: region:191499-192389:1
so has part: feature:191499-192389:1:exon

WP_083172428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191499-192389:1:exon

TREMTM_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: acpS
locus tag: TREMTM_RS00955
old locus tag: TRABTM_A_01880
so part of: sequence
location: 192543..192923
location: region:192543-192923:1
so has part: feature:192543-192923:1:exon
subclass of: SO_0000010

position:192543:1
position: 192543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192923:1
position: 192923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192543-192923:1:exon

TREMTM_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: acpS
locus tag: TREMTM_RS00955
old locus tag: TRABTM_A_01880
EC number: 2.7.8.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411607.1
GO function: GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0008610 - lipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: holo-ACP synthase
translation: MAIIGIGTDIVDIKRIEAVVFRNGDQLARRVLSSNELIQYHQHNRPVRFLAKRFAVKEAASKALGTGIRNGLTFSQFEIYNDKKGKPSLKLFAKADEIARRLSITGMYVTLTDERRYACATVIFER
SIO_010081: TREMTM_RS00955
subclass of: SO_0000673
so part of: TREMTM_RS00955
location: 192543..192923
location: region:192543-192923:1
so has part: feature:192543-192923:1:exon

WP_083172430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192543-192923:1:exon

TREMTM_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: priA
locus tag: TREMTM_RS00960
old locus tag: TRABTM_A_01890
so part of: sequence
location: complement(193176..195392)
location: region:193176-195392:-1
so has part: feature:193176-195392:-1:exon
subclass of: SO_0000010

position:193176:-1
position: 193176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195392:-1
position: 195392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193176-195392:-1:exon

TREMTM_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: priA
locus tag: TREMTM_RS00960
old locus tag: TRABTM_A_01890
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005175847.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primosomal protein N'
translation: MLIVNVALPMPIDRTFYYLLPDNVAPVVGGRVRVPFGQRKVIGIVISIIEYSEKLTVDKDKLKYISEVIDNHSLFSKSLWRILNWAIRYYHYPTGIVLFHALPILLRKGKPAEIAPLWQWFATEKGHSTIPESLKLVPKQQQALLILMQGPVYCNQVKNLQLINPTLKALRNKGLCDMRLHKVNYSCEWRSQFCIKNKLLHCSLTTEQALAVDSIRSEDDRFSVWLLAGVTGSGKTEVYLNVLEHILAKGKQALVLVPEINLTPQTIVLFRNRFNAPVEVLHSELNANERLNVWLKAKQGECAIVIGTRSALFTSFAQLGMIIIDEEHDISYKQHEGWRYHARDLAVFLAKEENIPIVLGTATPSLETLYNVQQKKYRQLTLSKRAGKAKPTEQQLLDIKGLPLMHGLSAPLLDKMREHLQVDNQVMLFLNRRGFAPAMLCHECGWSAECKRCDHSYTLHQQQRKLLCHYCNSKRTLPHQCSKCGSTQLITIGWGTEQLETTLKNIFPEVPVTRIDRDTTKRKGTLENYLAKVQHGGAQILIGTKMLATGHHFPDVTLVSLLDVDGALFSSDFRAPEHFAQLYTQVAGRAGRAEKFGEVLLQTHHPEHPLLQTLLQHNGYMDYAKKTLKERSQAGLPPFTNHILFRANDHDNRQAGLFLDQLRQLLESSTLRDNSLWIIGPIPALVPKRGGRFRWKLLLSHPLRPQLQRLITESLPIINTLSQASKVKWSLDVDPIDC
SIO_010081: TREMTM_RS00960
subclass of: SO_0000673
so part of: TREMTM_RS00960
location: complement(193176..195392)
location: region:193176-195392:-1
so has part: feature:193176-195392:-1:exon

WP_083172432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193176-195392:-1:exon

TREMTM_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpmE
locus tag: TREMTM_RS00965
old locus tag: TRABTM_A_01900
so part of: sequence
location: 195503..195712
location: region:195503-195712:1
so has part: feature:195503-195712:1:exon
subclass of: SO_0000010

position:195503:1
position: 195503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195712:1
position: 195712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195503-195712:1:exon

TREMTM_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpmE
locus tag: TREMTM_RS00965
old locus tag: TRABTM_A_01900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975436.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MQKNIHPKYVEIIATCSCGNVISINSTIGHNINLDVCGVCHPFYTGKQRVVDTGGRVNRFNKRFHIPKN
SIO_010081: TREMTM_RS00965
subclass of: SO_0000673
so part of: TREMTM_RS00965
location: 195503..195712
location: region:195503-195712:1
so has part: feature:195503-195712:1:exon

WP_083172434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195503-195712:1:exon

TREMTM_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00970
old locus tag: TRABTM_A_T0290
so part of: sequence
location: complement(195809..195893)
location: region:195809-195893:-1
so has part: feature:195809-195893:-1:exon
subclass of: SO_0000663

position:195809:-1
position: 195809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195893:-1
position: 195893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195809-195893:-1:exon

TREMTM_RS00970
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00970
old locus tag: TRABTM_A_T0290
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(195857..195859),aa:Ser,seq:tga)
SIO_010081: TREMTM_RS00970
subclass of: SO_0000673
so part of: TREMTM_RS00970
location: complement(195809..195893)
location: region:195809-195893:-1
so has part: feature:195809-195893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195809-195893:-1:exon

TREMTM_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00975
old locus tag: TRABTM_A_T0300
so part of: sequence
location: complement(196319..196392)
location: region:196319-196392:-1
so has part: feature:196319-196392:-1:exon
subclass of: SO_0000663

position:196319:-1
position: 196319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196392:-1
position: 196392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196319-196392:-1:exon

TREMTM_RS00975
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS00975
old locus tag: TRABTM_A_T0300
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(196356..196358),aa:Pro,seq:ggg)
SIO_010081: TREMTM_RS00975
subclass of: SO_0000673
so part of: TREMTM_RS00975
location: complement(196319..196392)
location: region:196319-196392:-1
so has part: feature:196319-196392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196319-196392:-1:exon

TREMTM_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplY
locus tag: TREMTM_RS00980
old locus tag: TRABTM_A_01910
so part of: sequence
location: complement(196435..196710)
location: region:196435-196710:-1
so has part: feature:196435-196710:-1:exon
subclass of: SO_0000010

position:196435:-1
position: 196435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196710:-1
position: 196710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196435-196710:-1:exon

TREMTM_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplY
locus tag: TREMTM_RS00980
old locus tag: TRABTM_A_01910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000494183.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L25
translation: MLTINAEIRKYKGKSASRRLRFLNKIPAIIYGKFKQPLAIEVDHDVVLNNKMHGNTLIIIINGKEESIVKLKSMQYHPFKPKVTHIDFINA
SIO_010081: TREMTM_RS00980
subclass of: SO_0000673
so part of: TREMTM_RS00980
location: complement(196435..196710)
location: region:196435-196710:-1
so has part: feature:196435-196710:-1:exon

WP_083172436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196435-196710:-1:exon

TREMTM_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ibpA
locus tag: TREMTM_RS00985
old locus tag: TRABTM_A_01920
so part of: sequence
location: 197006..197419
location: region:197006-197419:1
so has part: feature:197006-197419:1:exon
subclass of: SO_0000010

position:197006:1
position: 197006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197419:1
position: 197419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197006-197419:1:exon

TREMTM_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ibpA
locus tag: TREMTM_RS00985
old locus tag: TRABTM_A_01920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: small heat shock chaperone IbpA
translation: MRNFDFSPLYRSAIGFDRLVNLLEASQNKGSNSYPPYNVELVSENKYRVSIAVAGFAEKELDITAHDNIMTIKGVHTSENNQNNYLYQSIEDCNFERKFQLSEFIQIKGAHLVNGLLFIDLERIMPETLKPRRIEIN
SIO_010081: TREMTM_RS00985
subclass of: SO_0000673
so part of: TREMTM_RS00985
location: 197006..197419
location: region:197006-197419:1
so has part: feature:197006-197419:1:exon

WP_083172438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197006-197419:1:exon

TREMTM_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS00990
old locus tag: TRABTM_A_01930
so part of: sequence
location: 197452..197910
location: region:197452-197910:1
so has part: feature:197452-197910:1:exon
subclass of: SO_0000010

position:197452:1
position: 197452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197910:1
position: 197910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197452-197910:1:exon

TREMTM_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS00990
old locus tag: TRABTM_A_01930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009110834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20 family protein
translation: MLNYKLSPLFNQWIGFDKLANNIQDDLEDIGYPPYNIEKKDDKNYSITLALAGFKQEGLSIELEGPRLTIKGKPVLDIKETHYLHQGLVCKEFSLSFTLAEHMTVKQANFNYGLLKIELELHIPESMQPRHIAISGNNNYYSGLQDRILNKK
SIO_010081: TREMTM_RS00990
subclass of: SO_0000673
so part of: TREMTM_RS00990
location: 197452..197910
location: region:197452-197910:1
so has part: feature:197452-197910:1:exon

WP_083172440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197452-197910:1:exon

TREMTM_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: glyQ
locus tag: TREMTM_RS00995
old locus tag: TRABTM_A_01940
so part of: sequence
location: 198016..198930
location: region:198016-198930:1
so has part: feature:198016-198930:1:exon
subclass of: SO_0000010

position:198016:1
position: 198016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198930:1
position: 198930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198016-198930:1:exon

TREMTM_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: glyQ
locus tag: TREMTM_RS00995
old locus tag: TRABTM_A_01940
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409876.1
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit alpha
translation: MQNFNRKTFQGLILTLQEYWVRYGCTLVQPLDIEVGAGTSHPMTCLQAIGPEPIANAYVQNSRRPKDGRYGENPNRLQHYYQFQVIMKPSPDNIQELYLNSIIKLGLDLTINDLRFVEDNWENPTLGASGIGWEVWLNGMEVTQLTYFQQIGCLECRPVTGEITYGLERLAMYLQDVDSVYDLVWSEGTLGRRTYGDLLHQNEVEQSTYNFEYADVDFLFYCFEQYEKEVKSLLSLEKPLPLPAYERILKAAHSFNLLDARKAISVTVRQYYILRIRTLTKAVAEAYYASRESLGFPLCEKIKN
SIO_010081: TREMTM_RS00995
subclass of: SO_0000673
so part of: TREMTM_RS00995
location: 198016..198930
location: region:198016-198930:1
so has part: feature:198016-198930:1:exon

WP_083172442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198016-198930:1:exon

TREMTM_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: glyS
locus tag: TREMTM_RS01000
old locus tag: TRABTM_A_01950
so part of: sequence
location: 198951..201026
location: region:198951-201026:1
so has part: feature:198951-201026:1:exon
subclass of: SO_0000010

position:198951:1
position: 198951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201026:1
position: 201026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198951-201026:1:exon

TREMTM_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: glyS
locus tag: TREMTM_RS01000
old locus tag: TRABTM_A_01950
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409877.1
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit beta
translation: MTTNNFPTFLVEIGTEELPPKRLRNLAETFATKINSELDINGVSHGEISWFATPRRIAVKVAAMNETQEDSNIENLGPTIAQAFDAKGNPTKAALGWARDCGITISQAEYLVNKKGKWLVYNSIVKGKPVQNLLCGIVSNALEKLAILKIIRWVDNKFIWPLRTVTLLLNDLIIYGNILGINVDRVVLGHRFMGEQEIFLDHANNYPQVLVTRGRVIADYFQRKETIRRDVEFAAKKIGGVADLSDLMLEEVTSLVEWPVVLTARFEEKFLSVPAEVLVCTMKKDQKYFPVYDSVRNLLPYFIFVANIESKNPQKIIAGNEKVVRSRLADAEFFFNTDLKQRLEDRLSGLNSVLFQKNLGTIRDKSERVQALAAWIAGNIGANVQHAARAGLLSKCDLITNMVFEFTETQGVMGMHYALHDNEPEAIALAQKEQYHPRFSGDALPTTLVSCAVAIADKMDTLTGILGIGQYPRGDKDPFALRRIAIGVLRIIVEKKLSLDLQTMTLKTRSFYGDKLNNDSVVNDVIDFMFSRFRTWYQDQGYDLNIIQAVLAISPTCPVDFDARVRAVSYFCNFKESATLAVVHKRVSNILAKYDNNTVYGSIKTSILKDPAEINLATYLNVISEKLQPLFDTKRYQDALIELASLSEHVTAFFDNVMVMTDDYQVRINRLTLLSQLHKLFLKIADISLLQ
SIO_010081: TREMTM_RS01000
subclass of: SO_0000673
so part of: TREMTM_RS01000
location: 198951..201026
location: region:198951-201026:1
so has part: feature:198951-201026:1:exon

WP_083172444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198951-201026:1:exon

TREMTM_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: mutS
locus tag: TREMTM_RS01005
old locus tag: TRABTM_A_01960
so part of: sequence
location: 201094..203661
location: region:201094-203661:1
so has part: feature:201094-203661:1:exon
subclass of: SO_0000010

position:201094:1
position: 201094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203661:1
position: 203661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201094-203661:1:exon

TREMTM_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: mutS
locus tag: TREMTM_RS01005
old locus tag: TRABTM_A_01960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708182.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair protein MutS
translation: MSIFDIKDKDLDSYTPMMQQYLKLKAQHPDVLLFYRMGDFYELFYDDAKKASQLMDISLTKRGTIAGEPIPMAGIPYHAVDNYLAKLVSMGESIAICEQIDSHLATKVPVERRVVRIVTPGTLSEESLLNDRQDNLLAAIWQDQHRFGYATLDITSGRFLISEQIDREVMAAELQRTNPAELLYPENFQDISLIEHRRGLRRRQLWEFELDTARQQLTMHFGTHDLTCFGVDRAHLALCAAGCLLQYTKNTQCTSSLPHINTISLENKQEGILMDATTQRNLEITQNFSGGSKNTLADVIDRTVTPMGSRMLKRWLHMPIRNITTVNFRQKIIRVLHDQVSYLQPLLRQIGDLERILARLALRSARPRDLSRMRSAFAQIPSIKKLLINKDLDLIQLLNRIGDFEKIRYLLSQSIIESPPMLVRDGGVIAPGYNAELDELRGLATGATDYLYRLELSEREKTGIYNLKIGFNTVHGYFIQLSRNQSHLVPIHYVRRQTLKNAERYIIPELKKFEDKVLTAKSKALTLEKVLYDELFDLLLPNLAMMQQSAEALAELDVLCNLAERAETLNYVCPTLEARSGIYIKGGRHPVVEHLLKEPFIANKLMLSDKQCMLIITGPNMGGKSTYMRQNALIVLLAYIGSFVPAECAIIGPVDRIFTRIGAADDLASGRSTFMVEMTEIANILHNATHHSLVLIDEIGRGTSTYDGLAIAWACAENFASCIKSMTLFATHYFELTTIPDKMDGVVNVHLDAVEHGDTIAFMHNVQNGAANKSYGLSVAELAGIPRKIIKRARKKLHELEIISREKKFKNIDYLQFKQEDQKIPLLVKKLKNLKLDKISPLQALEVLYKIKKIL
SIO_010081: TREMTM_RS01005
subclass of: SO_0000673
so part of: TREMTM_RS01005
location: 201094..203661
location: region:201094-203661:1
so has part: feature:201094-203661:1:exon

WP_083172446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201094-203661:1:exon

TREMTM_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: lon
locus tag: TREMTM_RS01010
old locus tag: TRABTM_A_01970
so part of: sequence
location: complement(203791..206124)
location: region:203791-206124:-1
so has part: feature:203791-206124:-1:exon
subclass of: SO_0000010

position:203791:-1
position: 203791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206124:-1
position: 206124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203791-206124:-1:exon

TREMTM_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: lon
locus tag: TREMTM_RS01010
old locus tag: TRABTM_A_01970
EC number: 3.4.21.53
inference: COORDINATES: similar to AA sequence:RefSeq:NP_459446.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endopeptidase La
translation: MNAECSERIKIPVLPLRDVVVYPYMVIPLFVGREKSIRCLEAAVGSDKKIMLVAQKKASTDEPCIDDLFSVGTVSSILQILKLADGTVKLLVEGLSRARIKSWADRGDYFTADVDYFEAPELNNENERKLLIRTAINHFEVYISLNKKISTEILTSLKNIDDAVRLADTIAAHIPLKLTDKQSVLEMASVTERLEYLIAMMESEIDLLQVEKRIRHRVKKQMEKSQKEYYLNEQIKAIQKELGDLDDTPDENEVFKRKIDAAKMPNEAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLSVPWNLRSKVKKNLIKAQETLDRDHYGLEKVKERILEYLAVQSRISKIKGPILCLLGPPGVGKTSLGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKLSKVGVKNPLFLLDEIDKMSSDIRGDPASALLEVLDPEQNVTFNDHYLEVNYDLSDVMFVATSNTMNIPAPLLDRMEVIRLSGYTEEEKLNIAQQHLLSKQLKRNALKKSELKIEESAILGIIRYYTRESGVRSLEREISKICRKTVKNLLMNNNIKNMVISADNLKNFLGVQRFDYGRAEEKNIIGQVTGLAWTEVGGDLLIIETACVPGKGKLIYTGSLGEVMQESIQTAMTVVRARAEKIGISNNFYEKNDIHVHVPEGATPKDGPSAGIAICTAMVSCLSGNYVKANIAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVIIPFENKRDLEEMPTNVIKDLHIHPVQHIDEVLHMALQNNTF
SIO_010081: TREMTM_RS01010
subclass of: SO_0000673
so part of: TREMTM_RS01010
location: complement(203791..206124)
location: region:203791-206124:-1
so has part: feature:203791-206124:-1:exon

WP_083172448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203791-206124:-1:exon

TREMTM_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: clpX
locus tag: TREMTM_RS01015
old locus tag: TRABTM_A_01980
so part of: sequence
location: complement(206289..207557)
location: region:206289-207557:-1
so has part: feature:206289-207557:-1:exon
subclass of: SO_0000010

position:206289:-1
position: 206289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207557:-1
position: 207557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206289-207557:-1:exon

TREMTM_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: clpX
locus tag: TREMTM_RS01015
old locus tag: TRABTM_A_01980
EC number: 3.4.21.92
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1
GO component: GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease ATP-binding subunit ClpX
translation: MTDKSKNCSEKLLYCSFCSKNQSEVQKLIAGKSVYICDECVYLCNNIISEDIEITRSELRVLPTPHEINKYLNDYVIGQDKAQKVLSVAVYNHYKRLRHYNINNPIEIGKSNILLIGPTGSGKTLLAETMARFLDVPFIIADATTLTEAGYVGEDVENIIQKLLQKCNYDVQKAQYGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGGRKHPQQEFIRVDTSKILFICGGAFAGLNKVIEHRTGTRGIGFSAYIKGNSEKNNESRLLAQVEPEDLIKFGLIPEFIGRLPVVTTLNELSEEALIQILQKPKNALTKQYQALFNIEGVELEFNEEAITAIAKKAMKRKTGARGLRSIIENVLLETMYELPSKNNIDKVIIDESVIAGKSDPLFIYGNRRKEQQKSGN
SIO_010081: TREMTM_RS01015
subclass of: SO_0000673
so part of: TREMTM_RS01015
location: complement(206289..207557)
location: region:206289-207557:-1
so has part: feature:206289-207557:-1:exon

WP_083172450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206289-207557:-1:exon

TREMTM_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: clpP
locus tag: TREMTM_RS01020
old locus tag: TRABTM_A_01990
so part of: sequence
location: complement(207618..208220)
location: region:207618-208220:-1
so has part: feature:207618-208220:-1:exon
subclass of: SO_0000010

position:207618:-1
position: 207618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208220:-1
position: 208220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207618-208220:-1:exon

TREMTM_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: clpP
locus tag: TREMTM_RS01020
old locus tag: TRABTM_A_01990
EC number: 3.4.21.92
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975724.1
GO component: GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp endopeptidase proteolytic subunit ClpP
translation: MFIKNFMALVPMVVEQNSREERSYDIFSRLLKERIIFMTGKIEDYMANLIIAQMMFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTLSMGQTASISAFLLTAGAKGKRFCLPNSRIMIHQPLGGFYGQATDIKIHAREILYIKERINKLMAKHTGQSIEVIERDTERDRFLSASEAVDYGLVDFVLSQRL
SIO_010081: TREMTM_RS01020
subclass of: SO_0000673
so part of: TREMTM_RS01020
location: complement(207618..208220)
location: region:207618-208220:-1
so has part: feature:207618-208220:-1:exon

WP_172796631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207618-208220:-1:exon

TREMTM_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01025
old locus tag: TRABTM_A_T0310
so part of: sequence
location: complement(208392..208464)
location: region:208392-208464:-1
so has part: feature:208392-208464:-1:exon
subclass of: SO_0000663

position:208392:-1
position: 208392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208464:-1
position: 208464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208392-208464:-1:exon

TREMTM_RS01025
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS01025
old locus tag: TRABTM_A_T0310
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(208429..208431),aa:Thr,seq:cgt)
SIO_010081: TREMTM_RS01025
subclass of: SO_0000673
so part of: TREMTM_RS01025
location: complement(208392..208464)
location: region:208392-208464:-1
so has part: feature:208392-208464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208392-208464:-1:exon

TREMTM_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: dnaK
locus tag: TREMTM_RS01030
old locus tag: TRABTM_A_02010
so part of: sequence
location: 208736..210655
location: region:208736-210655:1
so has part: feature:208736-210655:1:exon
subclass of: SO_0000010

position:208736:1
position: 208736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210655:1
position: 210655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208736-210655:1:exon

TREMTM_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: dnaK
locus tag: TREMTM_RS01030
old locus tag: TRABTM_A_02010
inference: COORDINATES: similar to AA sequence:RefSeq:NP_308041.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaK
translation: MGKIIGIDLGTTNSCIAIIEGNKPRVLENSEGDRTTPSIIAYTQDGKILVGQPAKRQSITNPKNTLFAIKRLIGRRFQDNEVQRDVNIMPYKIIAADNGDAWIEVKDQKIAPQQISAEILKKMKKTVEDYLGESVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKETSNRTIAVYDLGGGTFDISIIEVDDVDGEKTFEVLSTNGDTHLGGEDFDSRLINYLVDEFKKDHGIDLRNDPLAMQRLKEAAEKAKIELSSSQQTDVNLPYITADNFGPKHMNLKVTRAKLELLVEELVNRTLEPLKLALKDTGLSVSDIKDVILVGGQTRMPLVQRKVTEFFGKEPRKDVNPDEAVAIGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGIMTQLISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAVDNKSLGQFNLDGIAPAMRGTPQIEVTFDIDADGILHVSAKDKNSGREQKITIKASSGLKEEEIQKMVQEAEANAESDRKFEELVQIRNQADHLLHSTRKQLKEYGAKLLENDKLAIEEALKNLDTSLKGEVKSDIENKIQLLIKVSSKLIEVAQHQKNEKDEVKESGDNNNAKTENEVVDAEFEEVKDKK
SIO_010081: TREMTM_RS01030
subclass of: SO_0000673
so part of: TREMTM_RS01030
location: 208736..210655
location: region:208736-210655:1
so has part: feature:208736-210655:1:exon

WP_083172452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208736-210655:1:exon

TREMTM_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: dnaJ
locus tag: TREMTM_RS01035
old locus tag: TRABTM_A_02020
so part of: sequence
location: 210774..211901
location: region:210774-211901:1
so has part: feature:210774-211901:1:exon
subclass of: SO_0000010

position:210774:1
position: 210774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211901:1
position: 211901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210774-211901:1:exon

TREMTM_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: dnaJ
locus tag: TREMTM_RS01035
old locus tag: TRABTM_A_02020
EC number: 1.8.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:NP_308042.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaJ
translation: MAKSDYYKILGISKNAEDREIKKAYKRLAMKFHPDRNQGNTEAEAKFKEIKEAYEVLADAKKRAAYDQYGHSAFEQGSMGGGSGSSSGTDFSEIFGDVFGDIFGSSRRQRTKRGSDLRYDIELSLEEAVRGVTREIRFPTLEECDICHGSGTRKGTSAVRCPTCNGQGQIQIRQSFFSVQQTCPNCQGQGKIIKYPCTNCNSNGRVEKVKTISVKIPAGIDTGDRIRLSGEGETGEHSAAGDLYVQVQVRKHPLFKREDNDLYCEVPINFAMAALGGEIEVPTLNSRVKLKIPAETQTGKLFRIRGKGVKSVRGGSQGDLLCRVVVETPVKLSEHQKKLLHELEKSFQGSIGYQNSPRSKNFFDGVKKFFDDLTS
SIO_010081: TREMTM_RS01035
subclass of: SO_0000673
so part of: TREMTM_RS01035
location: 210774..211901
location: region:210774-211901:1
so has part: feature:210774-211901:1:exon

WP_083172454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210774-211901:1:exon

TREMTM_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsT
locus tag: TREMTM_RS01040
old locus tag: TRABTM_A_02030
so part of: sequence
location: complement(211971..212267)
location: region:211971-212267:-1
so has part: feature:211971-212267:-1:exon
subclass of: SO_0000010

position:211971:-1
position: 211971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212267:-1
position: 212267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211971-212267:-1:exon

TREMTM_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsT
locus tag: TREMTM_RS01040
old locus tag: TRABTM_A_02030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
translation: MVSIKSAKKRTIQSEKRRQYNASNRSMMRTLLRKVHTAIALKDNEAAQNAFYVMQKIIDRKASNGLLHKNKASRYKSIINAKINTLLQNSNNKNNNNN
SIO_010081: TREMTM_RS01040
subclass of: SO_0000673
so part of: TREMTM_RS01040
location: complement(211971..212267)
location: region:211971-212267:-1
so has part: feature:211971-212267:-1:exon

WP_083172456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211971-212267:-1:exon

TREMTM_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ileS
locus tag: TREMTM_RS01045
old locus tag: TRABTM_A_02040
so part of: sequence
location: 212362..215184
location: region:212362-215184:1
so has part: feature:212362-215184:1:exon
subclass of: SO_0000010

position:212362:1
position: 212362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215184:1
position: 215184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212362-215184:1:exon

TREMTM_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ileS
locus tag: TREMTM_RS01045
old locus tag: TRABTM_A_02040
EC number: 6.1.1.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015841784.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoleucine--tRNA ligase
translation: MNNCKKYTINLPYTKFPMRGNLANREPNMLERWYINDLYGLIRKSRKGKEKFILHDGPPYANGSIHIGHSVNKILKDIIIKSKILMGYDSPYVPGWDCHGLPIELKVEQLIGKPGNKVNTSDFRVACRKYAAKQVEKQKRDFMRLGILGDWKHPYLTMNFITEANTIRAFGKIIANGYLYKGAKPVHWCIDCCSALAESEIEYYEQTSPSIDVTFEAADSLSLAKKFQANNFTGKISIVIWTTTPWTLPANRAIAINPNLNYQLVEINGKGYILAADLVKNLIIRTNIQHWKIIGVPTKGSNLELLKFRHPFMDFNVSIILSNHVTLSTGTGAVHIAPGHGLEDYILSQKYGLEVTNLVGPDGYYLSGILKELDGIQFLKANDIVIEILRAKEAIMHADKLQHSYSYCWRHKTPIIFRTTPQWFISLDLLNLRKNTLEEIKKVNWIPNCGQERIKNMVANCPDWCISRQRIWGVPMVLFVHKKTQLLHPSTIEIIEKVAKMVEKKGVQAWWDLNPINLLGEDAIHYHKVPDTLDVWFDSGSTYFSVVSVHPDFEKATPDLYLEGYDQHRGWFMSSLIISTAIYGKAPYRQVLTHGFIVDEKSRKMSKSLGNVVSPQQIVDKLGADILRLWVASSDYTGEMAISNEILKRAVDIYRRIRNTIRFLLANLNFFDPNKHIVNPEHMVLLDRWAVSCALTAQEEIIAAYNRYDFHNVIQRIMQFCSIEMGSFYLDIIKDRQYTAKADSIARRSCQTALYHICEAIVRWIAPIMSFTADEIWEFMPGKRMQYVFTEEWYKGLFKLDYNQPFNDKYWRTLLKVRNETNKIIEIARADKRICASLEASVTLYAKPSLATLLRKVGNELYFALLTSNAVVADYDAAGNDAMQCQGLKGLKITLERAVGKKCQRCWHYELNIGQNTNYPEICSRCVTNIAGYGEKRKFI
SIO_010081: TREMTM_RS01045
subclass of: SO_0000673
so part of: TREMTM_RS01045
location: 212362..215184
location: region:212362-215184:1
so has part: feature:212362-215184:1:exon

WP_083172458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212362-215184:1:exon

TREMTM_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: recA
locus tag: TREMTM_RS01050
old locus tag: TRABTM_A_02050
pseudo: true
so part of: sequence
location: 215642..>216628
location: region:215642-216628:1
so has part: feature:215642-216628:1:exon
subclass of: SO_0000010

position:215642:1
position: 215642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216628:1
position: 216628
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215642-216628:1:exon

TREMTM_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: recA
locus tag: TREMTM_RS01050
old locus tag: TRABTM_A_02050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209446.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase RecA
SIO_010081: TREMTM_RS01050
subclass of: SO_0000673
so part of: TREMTM_RS01050
location: 215642..>216628
location: region:215642-216628:1
so has part: feature:215642-216628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215642-216628:1:exon

TREMTM_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: alaS
locus tag: TREMTM_RS01055
old locus tag: TRABTM_A_02060
so part of: sequence
location: 216701..219334
location: region:216701-219334:1
so has part: feature:216701-219334:1:exon
subclass of: SO_0000010

position:216701:1
position: 216701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219334:1
position: 219334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216701-219334:1:exon

TREMTM_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: alaS
locus tag: TREMTM_RS01055
old locus tag: TRABTM_A_02060
EC number: 6.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011094879.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--tRNA ligase
translation: MSNSTDDIRQKFINFFNSKEHQLVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDNRSYRRATTSQRCVRAGGKHNDLENVGYTTRHHTFFEMLGNFSFGDYFKYDAIRFAWELLTSEQWFNLPKDKLWVTVYATDYESYNIWANDIGVPLKHIIRIGDNKGIAYNSDNFWKMGETGPCGPCSEIFYDHGNHILGNPPGSIDKNGDRYIEIWNLVFMQFNRHTDGTLLLLPKPSVDTGMGLERIAAVLQNVDSNYDIDFFKKIIDAAAWATGTNNLNSKSLRVIADHIRSCAFIISDGVVPSNEGRGYVLRRIIRRALRHGNILGVSNTFFYKLVAPLIEVMGNVAGNLKLQRSIVEQILRTEEEQFNRTIKRGLTLLDEELEKLTGDTLNGETAFRLYDTYGFPLDFTLDICRERNLSVDKAGFKSALEAQRKKARDSRHFSFDYNSHILLQQVEEISSFIGYEQLKHQSIVIAIFRNGHRVNIIFNGEEAIIVLKETPFYSEMGGQIGDQGELKAASGIFQVTDTQKYGRAICHLGKINYGEIRLGMNVTAQVNDLLRKKICLNHSATHLLHAALRQVLGPHIKQKSSSVKDKYLRFDFLHSKAMELEQIRQVEKIVNKQIRRNISIKTEILTLEEACKKGAIALFNDKYVRMLSIGDFSKELCGGTHANRTGDIGIFSITKESGIAANIRRIEAVTGEEAIILFNNQNNLLNQVTKLIKSDSKTIVNKVRALQEHSRQLEKDIQELKNKYATQIVISIIQNVRNIKGVKVLVTKLDNIEYKVLRIMVDHLKNKLGSAVIVLATTIAGKIYIIAGVTKDLIERIKAYDIVIHIAQQVGVKGGGRADIAQASGKNNNTTTLSTVLENVDAIIAVSI
SIO_010081: TREMTM_RS01055
subclass of: SO_0000673
so part of: TREMTM_RS01055
location: 216701..219334
location: region:216701-219334:1
so has part: feature:216701-219334:1:exon

WP_083172462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216701-219334:1:exon

TREMTM_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: csrA
locus tag: TREMTM_RS01060
old locus tag: TRABTM_A_02070
so part of: sequence
location: 219365..219544
location: region:219365-219544:1
so has part: feature:219365-219544:1:exon
subclass of: SO_0000010

position:219365:1
position: 219365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219544:1
position: 219544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219365-219544:1:exon

TREMTM_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: csrA
locus tag: TREMTM_RS01060
old locus tag: TRABTM_A_02070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007370562.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon storage regulator CsrA
translation: MLILNRKVGETLIISNSNVTMVTVLSIKGNKVRIGVNAPKEISVYREEIYQRLQDNTKS
SIO_010081: TREMTM_RS01060
subclass of: SO_0000673
so part of: TREMTM_RS01060
location: 219365..219544
location: region:219365-219544:1
so has part: feature:219365-219544:1:exon

WP_083172464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219365-219544:1:exon

TREMTM_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01065
old locus tag: TRABTM_A_T0320
so part of: sequence
location: 219705..219797
location: region:219705-219797:1
so has part: feature:219705-219797:1:exon
subclass of: SO_0000663

position:219705:1
position: 219705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219797:1
position: 219797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219705-219797:1:exon

TREMTM_RS01065
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS01065
old locus tag: TRABTM_A_T0320
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:219739..219741,aa:Ser,seq:gct)
SIO_010081: TREMTM_RS01065
subclass of: SO_0000673
so part of: TREMTM_RS01065
location: 219705..219797
location: region:219705-219797:1
so has part: feature:219705-219797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219705-219797:1:exon

TREMTM_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01070
old locus tag: TRABTM_A_T0330
so part of: sequence
location: 219808..219881
location: region:219808-219881:1
so has part: feature:219808-219881:1:exon
subclass of: SO_0000663

position:219808:1
position: 219808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219881:1
position: 219881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219808-219881:1:exon

TREMTM_RS01070
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS01070
old locus tag: TRABTM_A_T0330
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:219842..219844,aa:Arg,seq:acg)
SIO_010081: TREMTM_RS01070
subclass of: SO_0000673
so part of: TREMTM_RS01070
location: 219808..219881
location: region:219808-219881:1
so has part: feature:219808-219881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219808-219881:1:exon

TREMTM_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tyrS
locus tag: TREMTM_RS01075
old locus tag: TRABTM_A_02090
so part of: sequence
location: complement(219935..221218)
location: region:219935-221218:-1
so has part: feature:219935-221218:-1:exon
subclass of: SO_0000010

position:219935:-1
position: 219935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221218:-1
position: 221218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219935-221218:-1:exon

TREMTM_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tyrS
locus tag: TREMTM_RS01075
old locus tag: TRABTM_A_02090
EC number: 6.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020884327.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine--tRNA ligase
translation: MVSNNLLQKLHKRGFIAQITNKKELADRLNSGPIVFYCGFDPTSDSLHLGHLVPLFCLKHFQLAGHRPIALVGGATGLIGDPSYKTTERKLNTVESIREWVEKIKYQVSSILDFNCGNNSAIVVNNYDWFRSISVLTFLRYIGKYFSVNQMIKKETVKQRFKRANNGISFTEFSYNVLQGYDFAYLNKKYGVALQIGGSDQWGNITSGIDLTRRLNNHTVYGLTLPIINKKNGNKFGKTESDTIWIDPNKTSPYKFYQFWINTADSDVYRFLKIFTFLELATIEAIEQADLDRGSKAPSAQYILAEEITRIIHGKHGLATAKRITASIFTGTIANLTKADLDQMAQDGIPTVVIERNIDLQQALLTSDIAISRRQARILIKSHAISINGKKQTSEDYVFNEYDKLYGSYTLLRKGKKHNFLLHWKIT
SIO_010081: TREMTM_RS01075
subclass of: SO_0000673
so part of: TREMTM_RS01075
location: complement(219935..221218)
location: region:219935-221218:-1
so has part: feature:219935-221218:-1:exon

WP_083172466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219935-221218:-1:exon

TREMTM_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rnt
locus tag: TREMTM_RS01080
old locus tag: TRABTM_A_02110
so part of: sequence
location: 221743..222393
location: region:221743-222393:1
so has part: feature:221743-222393:1:exon
subclass of: SO_0000010

position:221743:1
position: 221743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222393:1
position: 222393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221743-222393:1:exon

TREMTM_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rnt
locus tag: TREMTM_RS01080
old locus tag: TRABTM_A_02110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014887883.1
GO function: GO:0016896 - exoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO process: GO:0006364 - rRNA processing [Evidence IEA]; GO:0042780 - tRNA 3'-end processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease T
translation: MDKLVNLENINTLSIRFRGFYPVVIDVETAGFNAGTDALLEIAAVTLKMDKKGWLHADNTLHFHITPFHGAQLQPEALAFNGIDPLNPLRGAVTEHEALHKIFKMVRKGIKEHDCNRAIIVAHNAAFDHDFLMVAASRADLKNNPFHPFVTFDTAALSGLVLGQTVLAKACNAAGIEFDNNEAHSALYDTERTAALFCELVNRWKRLGGWPVVDLP
SIO_010081: TREMTM_RS01080
subclass of: SO_0000673
so part of: TREMTM_RS01080
location: 221743..222393
location: region:221743-222393:1
so has part: feature:221743-222393:1:exon

WP_083172468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221743-222393:1:exon

TREMTM_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01085
old locus tag: TRABTM_A_02120
pseudo: true
so part of: sequence
location: complement(<222509..222745)
location: region:222509-222745:-1
so has part: feature:222509-222745:-1:exon
subclass of: SO_0000010

position:222509:-1
position: 222509
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:222745:-1
position: 222745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222509-222745:-1:exon

TREMTM_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01085
old locus tag: TRABTM_A_02120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004701358.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: BolA/IbaG family iron-sulfur metabolism protein
SIO_010081: TREMTM_RS01085
subclass of: SO_0000673
so part of: TREMTM_RS01085
location: complement(<222509..222745)
location: region:222509-222745:-1
so has part: feature:222509-222745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222509-222745:-1:exon

TREMTM_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01090
old locus tag: TRABTM_A_02130
so part of: sequence
location: 222990..223604
location: region:222990-223604:1
so has part: feature:222990-223604:1:exon
subclass of: SO_0000010

position:222990:1
position: 222990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223604:1
position: 223604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222990-223604:1:exon

TREMTM_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01090
old locus tag: TRABTM_A_02130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975517.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: riboflavin synthase subunit alpha
translation: MFTGIIQATAPIIAIKEKKFFRTHYVRLPVALLPNLNIGASVAHNGCCLTVTGINGNLVSFDIMKETLRITNLGNLKVGDEINIERAAKINSEISGHLISGHIICIAELIKIIISENNLNIWFSLHDNTLIKYVMHKGYIAVDGISLTLGKVVNNCFCVHLIPETLLRTTLGKKLLGDSVNIEIDSHTQLIVNTVEQLLAKKIY
SIO_010081: TREMTM_RS01090
subclass of: SO_0000673
so part of: TREMTM_RS01090
location: 222990..223604
location: region:222990-223604:1
so has part: feature:222990-223604:1:exon

WP_083172472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222990-223604:1:exon

TREMTM_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01095
pseudo: true
so part of: sequence
location: <223635..>223736
location: region:223635-223736:1
so has part: feature:223635-223736:1:exon
subclass of: SO_0000010

position:223635:1
position: 223635
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:223736:1
position: 223736
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223635-223736:1:exon

TREMTM_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010276591.1
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutaredoxin domain-containing protein
SIO_010081: TREMTM_RS01095
subclass of: SO_0000673
so part of: TREMTM_RS01095
location: <223635..>223736
location: region:223635-223736:1
so has part: feature:223635-223736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223635-223736:1:exon

TREMTM_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01100
old locus tag: TRABTM_A_T0340
so part of: sequence
location: 223885..223958
location: region:223885-223958:1
so has part: feature:223885-223958:1:exon
subclass of: SO_0000663

position:223885:1
position: 223885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223958:1
position: 223958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223885-223958:1:exon

TREMTM_RS01100
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS01100
old locus tag: TRABTM_A_T0340
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:223919..223921,aa:Pro,seq:cgg)
SIO_010081: TREMTM_RS01100
subclass of: SO_0000673
so part of: TREMTM_RS01100
location: 223885..223958
location: region:223885-223958:1
so has part: feature:223885-223958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223885-223958:1:exon

TREMTM_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: greA
locus tag: TREMTM_RS01105
old locus tag: TRABTM_A_02140
so part of: sequence
location: 224152..224628
location: region:224152-224628:1
so has part: feature:224152-224628:1:exon
subclass of: SO_0000010

position:224152:1
position: 224152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224628:1
position: 224628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224152-224628:1:exon

TREMTM_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: greA
locus tag: TREMTM_RS01105
old locus tag: TRABTM_A_02140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreA
translation: MNKIPMTIRGAEKLRKELEYLKNVCRPKITRSIADAREYGDLKENAEYHAAREQQVFCEGRIEKIEAKLFNAQVIDVTKLTPNGRVIFGATVSVENINNKEKQKYCIVGDDEADFKKNLISINSPIARGLIGKIEGDIVVIKTPNGIVEYKIIRVDYL
SIO_010081: TREMTM_RS01105
subclass of: SO_0000673
so part of: TREMTM_RS01105
location: 224152..224628
location: region:224152-224628:1
so has part: feature:224152-224628:1:exon

WP_083172476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224152-224628:1:exon

TREMTM_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rlmE
locus tag: TREMTM_RS01110
old locus tag: TRABTM_A_02150
so part of: sequence
location: 224713..225342
location: region:224713-225342:1
so has part: feature:224713-225342:1:exon
subclass of: SO_0000010

position:224713:1
position: 224713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225342:1
position: 225342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224713-225342:1:exon

TREMTM_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rlmE
locus tag: TREMTM_RS01110
old locus tag: TRABTM_A_02150
EC number: 2.1.1.166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005156285.1
GO function: GO:0016436 - rRNA (uridine) methyltransferase activity [Evidence IEA]
GO process: GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
translation: MTTKKRSASSIFWLKEHFNDKYVQHAQKKQLRSRAWFKLHQIQQSDNIFYPGITVVDLGSSPGGWSKYVVMQIGNKGRVIACDILPMESIVGVEFIQGDFRNPLVLNSLIEVIGKKKVQVVLSDMAPNISGTPEVDIPKTMYLVELALDMCLDVLAPGGSFLVKIFQGENFDKYLHTISSLFKKVKIRKPEASRASSREVYIVAKERKL
SIO_010081: TREMTM_RS01110
subclass of: SO_0000673
so part of: TREMTM_RS01110
location: 224713..225342
location: region:224713-225342:1
so has part: feature:224713-225342:1:exon

WP_083172478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224713-225342:1:exon

TREMTM_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: ftsH
locus tag: TREMTM_RS01115
old locus tag: TRABTM_A_02160
pseudo: true
so part of: sequence
location: 225402..>227225
location: region:225402-227225:1
so has part: feature:225402-227225:1:exon
subclass of: SO_0000010

position:225402:1
position: 225402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227225:1
position: 227225
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225402-227225:1:exon

TREMTM_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: ftsH
locus tag: TREMTM_RS01115
old locus tag: TRABTM_A_02160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410234.1
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
SIO_010081: TREMTM_RS01115
subclass of: SO_0000673
so part of: TREMTM_RS01115
location: 225402..>227225
location: region:225402-227225:1
so has part: feature:225402-227225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225402-227225:1:exon

TREMTM_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: secG
locus tag: TREMTM_RS01120
old locus tag: TRABTM_A_02170
so part of: sequence
location: 227465..227746
location: region:227465-227746:1
so has part: feature:227465-227746:1:exon
subclass of: SO_0000010

position:227465:1
position: 227465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227746:1
position: 227746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227465-227746:1:exon

TREMTM_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: secG
locus tag: TREMTM_RS01120
old locus tag: TRABTM_A_02170
inference: COORDINATES: protein motif:HMM:TIGR00810.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecG
translation: MYRFLLIIFIVISIVLITLIMLQKIKGANNVSTSSSIGSSSTILGFKKSSNFVTRITFMLAALFFIISLILGKLNNKYILKKNGNKRSKKVTN
SIO_010081: TREMTM_RS01120
subclass of: SO_0000673
so part of: TREMTM_RS01120
location: 227465..227746
location: region:227465-227746:1
so has part: feature:227465-227746:1:exon

WP_083172482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227465-227746:1:exon

TREMTM_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01125
old locus tag: TRABTM_A_T0350
so part of: sequence
location: 227805..227893
location: region:227805-227893:1
so has part: feature:227805-227893:1:exon
subclass of: SO_0000663

position:227805:1
position: 227805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227893:1
position: 227893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227805-227893:1:exon

TREMTM_RS01125
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS01125
old locus tag: TRABTM_A_T0350
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:227839..227841,aa:Leu,seq:gag)
SIO_010081: TREMTM_RS01125
subclass of: SO_0000673
so part of: TREMTM_RS01125
location: 227805..227893
location: region:227805-227893:1
so has part: feature:227805-227893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227805-227893:1:exon

TREMTM_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: nusA
locus tag: TREMTM_RS01130
old locus tag: TRABTM_A_02180
so part of: sequence
location: 228047..229528
location: region:228047-229528:1
so has part: feature:228047-229528:1:exon
subclass of: SO_0000010

position:228047:1
position: 228047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229528:1
position: 229528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228047-229528:1:exon

TREMTM_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: nusA
locus tag: TREMTM_RS01130
old locus tag: TRABTM_A_02180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012771124.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor NusA
translation: MNKEILAVVEAVSNEKSIPKDKLFEALETALVTATKKKYENEIDVRVSINHKSGDFNTFRRWIIVDKVTQPTLEITLEAAKMEDPLAKIGGYIEYQIESITFDRITTQTAKQVIIQKMREAERAIVINQFCNYEGKLITSLVKKVNRDNIILDLGSNVEALIGREDMLPHENFRPGDRIRGILYSIRPELRGAQLFVSRSRPEMLVELLRIEVPEISDEIIEIKAAARDPGSRAKIAVKTNDKRIDPIGACVGMRGARVQAVSKELNGERIDIVLWDNNPAKFVINAMAPADVVSIVVDEDKHTMDIAVEADNLAQAIGRNGQNVRLASQLSGWELNVITVEDMKLKHQAENNEAIDILTSNLHINKNLATVLVAAGFSSIEELAYVPLNELLEIKLLNEETIKMLREKAKNALTKLALAKQKNRIPAKDLLELQELDRCIAFNLAKYGVCNLQDLAEQSVEDISDIDGLSSEKAGEIIMAARNICWFRDNDK
SIO_010081: TREMTM_RS01130
subclass of: SO_0000673
so part of: TREMTM_RS01130
location: 228047..229528
location: region:228047-229528:1
so has part: feature:228047-229528:1:exon

WP_083172485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228047-229528:1:exon

TREMTM_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: infB
locus tag: TREMTM_RS01135
old locus tag: TRABTM_A_02190
so part of: sequence
location: 229551..232055
location: region:229551-232055:1
so has part: feature:229551-232055:1:exon
subclass of: SO_0000010

position:229551:1
position: 229551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232055:1
position: 232055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229551-232055:1:exon

TREMTM_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: infB
locus tag: TREMTM_RS01135
old locus tag: TRABTM_A_02190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012773288.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-2
translation: MTDVNMKSLAAEIQIPVDHLIKQFADAGIDKTAADSVTEMEKKIFFAYLNNRNILSNKLTLQHKIRSTLNISSTGGKNKSIQIEVRRKRNYQQVQEQAEEKAKRDAEEKAKRDAEEKAKRDAEEKAKCDAEEKAKRKKDKTKRKELAEFKRKDKMHHEEKLYKKADKKRIFTEKVGNNFFDNASLDEDLINYIEGDRRRNPVVKYSNKKTSSLSEEDNADIEESRAVGRKNKSKISTLLHSFNKPTKVLNRDVIIGETITVAELAKKMAIKGSQVIKKMMKLGAATTSNQVLDQETAQLIAEEMGHNVILRLENELEKSLMYERNTDTPELRAPVVTIMGHVDHGKTSLLDYIRIAKVAAEEVGGITQHISAYHFKTDKGMITFIDTPGHAAFTAMRARGVQITDIVVLVVAADDGVMLQTIEAIKHAKAAKVPIVVAVNKIDKLEADPDRVKNELIQYDLLPEEWGGENQFVHVSAKTGSGIDKLIEAILLQAEILELKAIHKGMASGVVIESFLDKGLGPVAIVLVLEGTLNRGDVVICGIEYGRVRAMRNEFDFDLESAGPSVPVKILGLSGIPAAGDKVTVVRDDKKAREVAIYRQGKFREIKLALQQKSKLEKMENMFAITKSEVSELNIVLKSDVQGSAEAISNALKNLSNDEVKVKIIVSGVGSINETDVTLAAASNAIILGFNVRADNYVNKLLESEKLEIRYYSVIYDLLNEVKQAMNSMLLPAYKQEIVGIAKVSDVFNSPKLGVIAGCIVTEGVVKCHNPIRILRKNIVIYKGEIESLRHFKDDVNEVRNGLTCGIGIKNYNNIILGDVIEVFKNVEIKNTIA
SIO_010081: TREMTM_RS01135
subclass of: SO_0000673
so part of: TREMTM_RS01135
location: 229551..232055
location: region:229551-232055:1
so has part: feature:229551-232055:1:exon

WP_083172487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229551-232055:1:exon

TREMTM_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rbfA
locus tag: TREMTM_RS01140
old locus tag: TRABTM_A_02200
so part of: sequence
location: 232091..232456
location: region:232091-232456:1
so has part: feature:232091-232456:1:exon
subclass of: SO_0000010

position:232091:1
position: 232091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232456:1
position: 232456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232091-232456:1:exon

TREMTM_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rbfA
locus tag: TREMTM_RS01140
old locus tag: TRABTM_A_02200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975691.1
GO function: GO:0019843 - rRNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosome-binding factor RbfA
translation: MAKEYSRIQRVSQEIKKNTAIILQREIQDPRIKITTVSYVKVSRDLASAKIFVTFLNNEHPEQVKHNIRILQGAAYKVRSLLGKAMYLRIVPELHFIYDNSLLEGIRISKLVRQVVQNKNN
SIO_010081: TREMTM_RS01140
subclass of: SO_0000673
so part of: TREMTM_RS01140
location: 232091..232456
location: region:232091-232456:1
so has part: feature:232091-232456:1:exon

WP_083172489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232091-232456:1:exon

TREMTM_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: truB
locus tag: TREMTM_RS01145
old locus tag: TRABTM_A_02210
so part of: sequence
location: 232462..233400
location: region:232462-233400:1
so has part: feature:232462-233400:1:exon
subclass of: SO_0000010

position:232462:1
position: 232462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233400:1
position: 233400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232462-233400:1:exon

TREMTM_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: truB
locus tag: TREMTM_RS01145
old locus tag: TRABTM_A_02210
EC number: 5.4.99.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888188.1
GO function: GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(55) synthase TruB
translation: MNRLKGNCRYRNINGIVLLDKPINISSNDVLQTVKRIYYANKAGHTGSLDPLATGMLPICLGEATKFSQYLLNADKRYKVTAKLGERTNTSDANGQTISIRPVSLNKTKLIKELKYFCGESNQVPSMFSALKYHGRPLYEYARKGINVVREARKINVYDLKLHNWNLNKLELEIHCSKGTYIRTIIDDLGERLGCGAHVIALRRTAVANYSSSDMITLTALQAIYAETLNNKEKFSYLDALLLPIDSALIAMPTINIPSYLAYRLLLGQNIKVIAPHVGLVRIIYDNSNFLGIGEINSQALLIPRCLVKNRT
SIO_010081: TREMTM_RS01145
subclass of: SO_0000673
so part of: TREMTM_RS01145
location: 232462..233400
location: region:232462-233400:1
so has part: feature:232462-233400:1:exon

WP_083172491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232462-233400:1:exon

TREMTM_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsO
locus tag: TREMTM_RS01150
old locus tag: TRABTM_A_02220
so part of: sequence
location: 233520..233789
location: region:233520-233789:1
so has part: feature:233520-233789:1:exon
subclass of: SO_0000010

position:233520:1
position: 233520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233789:1
position: 233789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233520-233789:1:exon

TREMTM_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsO
locus tag: TREMTM_RS01150
old locus tag: TRABTM_A_02220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S15
translation: MSLSFEIKKKIISTFGRNAKDSGYTEVQIAILTAQISHLHNHFMENKNDHHSRRGLLRMVSKRRKLLEYLKKKDIVRYTNLIERLDLRH
SIO_010081: TREMTM_RS01150
subclass of: SO_0000673
so part of: TREMTM_RS01150
location: 233520..233789
location: region:233520-233789:1
so has part: feature:233520-233789:1:exon

WP_083172494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233520-233789:1:exon

TREMTM_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: pnp
locus tag: TREMTM_RS01155
old locus tag: TRABTM_A_02230
so part of: sequence
location: 233988..236072
location: region:233988-236072:1
so has part: feature:233988-236072:1:exon
subclass of: SO_0000010

position:233988:1
position: 233988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236072:1
position: 236072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233988-236072:1:exon

TREMTM_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: pnp
locus tag: TREMTM_RS01155
old locus tag: TRABTM_A_02230
EC number: 2.7.7.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002228303.1
GO function: GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyribonucleotide nucleotidyltransferase
translation: MLNPIVCKFQYGYHTVTIETGLMARQATAAVMITMEDTAVFVAVVGAKQEKTGHNFFPLTVNYQERTYAAGRFPGGFFRREGRPSESETLISRLIDRPIRPLFPEGFFNEVQIIATVVSINPQISPDIVAMIGASAALSLSGIPFNGPIGAARIGFINNKYVLNPTKVELTESRLDLVVAGTANTVLMVESEAQLLKEDQMLEAIVYGHDQQQVVIENINQLVAKAGKPKWQWKHQDVNVSLKTKVVELAESRIGDAYRITEKQNRYAVVDAIKKDTIETLKYQDNTLEESEIHSILWMLEKNVVRSRVLRGKPRIDGRENDMIRNLDVRIGVLPRTHGSALFTRGETQALVTVTLGTERDAQNIDDLTGERIDRFLLHYNFPLYCVGETGMVGSPKRREIGHGSLAKRGIMAVMPNASEFPYTIRVVAEITESNGSSSMASVCGASLALMDAGVPIKTAVAGIAIGLIKEEEKFVVLSDIIGDEDHLGDMDLKVAGSMEGITALQMDIKIEGITSKIMNIALEQAKIARNHILRIMERSISSPRCNISEFAPRIHTVKINPDKIKDLIGKGGSVIRVLTEETGTTIEIEDDGTVKVVATSIDKANHAIRRIKEITAEIEVGRIYNGKVARIVDFGAFVVISGGKEGLVHISQIVDKRVEKVTDYLELGQEVPVKVIEVDRQGRVRLSIKEAIT
SIO_010081: TREMTM_RS01155
subclass of: SO_0000673
so part of: TREMTM_RS01155
location: 233988..236072
location: region:233988-236072:1
so has part: feature:233988-236072:1:exon

WP_083172496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233988-236072:1:exon

TREMTM_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01160
old locus tag: TRABTM_A_02240
pseudo: true
so part of: sequence
location: 236151..>237467
location: region:236151-237467:1
so has part: feature:236151-237467:1:exon
subclass of: SO_0000010

position:236151:1
position: 236151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237467:1
position: 237467
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236151-237467:1:exon

TREMTM_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01160
old locus tag: TRABTM_A_02240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943788.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
SIO_010081: TREMTM_RS01160
subclass of: SO_0000673
so part of: TREMTM_RS01160
location: 236151..>237467
location: region:236151-237467:1
so has part: feature:236151-237467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236151-237467:1:exon

TREMTM_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01165
old locus tag: TRABTM_A_T0360
so part of: sequence
location: complement(237909..237981)
location: region:237909-237981:-1
so has part: feature:237909-237981:-1:exon
subclass of: SO_0000663

position:237909:-1
position: 237909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237981:-1
position: 237981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237909-237981:-1:exon

TREMTM_RS01165
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS01165
old locus tag: TRABTM_A_T0360
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(237946..237948),aa:Lys,seq:ctt)
SIO_010081: TREMTM_RS01165
subclass of: SO_0000673
so part of: TREMTM_RS01165
location: complement(237909..237981)
location: region:237909-237981:-1
so has part: feature:237909-237981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237909-237981:-1:exon

TREMTM_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: mnmE
locus tag: TREMTM_RS01170
old locus tag: TRABTM_A_02250
so part of: sequence
location: complement(238050..239426)
location: region:238050-239426:-1
so has part: feature:238050-239426:-1:exon
subclass of: SO_0000010

position:238050:-1
position: 238050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239426:-1
position: 239426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238050-239426:-1:exon

TREMTM_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: mnmE
locus tag: TREMTM_RS01170
old locus tag: TRABTM_A_02250
EC number: 3.6.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848543.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
translation: MSIDTDTITAIATPQGRGGIGILRVSGPLATSVARMLLGKLPIPRQAEYLPFCDMNGNHIDHGIALFFPGPFSFTGEDILELQGHGGPIILDLLLQQIISLQGVRIAHPGEFSKRAFINNKLDLAQAEAIADLIDASSVQAARSAFNSLQGKFSIRIHELVEMLTNLRIAVEAAIDFPDEDIDFISKSKIETSINDIITRLNMVIAEAHQGSILREGIKVVIAGKPNAGKSSLLNAIAGREVAIVTAVAGTTRDILREYIHINGIPMHIIDTAGLHESEDEVEKIGIERAWREIKQADHVLLIDSDSKEEIDSTETTLKMIQKFIARIPSGIDVTIVRNKADITGEKIGIRKIKDYSIITLSAKAGIGLNFLFEHLKQINGFTGSTEGQFLARRRHIEALKNAAKHLFQGKEQLVNACYCELLAEELRLAQKMLSEITGEFSSNDLLKNIFSSFCIGK
SIO_010081: TREMTM_RS01170
subclass of: SO_0000673
so part of: TREMTM_RS01170
location: complement(238050..239426)
location: region:238050-239426:-1
so has part: feature:238050-239426:-1:exon

WP_083172498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238050-239426:-1:exon

TREMTM_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: yidC
locus tag: TREMTM_RS01175
old locus tag: TRABTM_A_02260
pseudo: true
so part of: sequence
location: complement(239429..241032)
location: region:239429-241032:-1
so has part: feature:239429-241032:-1:exon
subclass of: SO_0000010

position:239429:-1
position: 239429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241032:-1
position: 241032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239429-241032:-1:exon

TREMTM_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: yidC
locus tag: TREMTM_RS01175
old locus tag: TRABTM_A_02260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000378275.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0032977 - membrane insertase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: membrane protein insertase YidC
SIO_010081: TREMTM_RS01175
subclass of: SO_0000673
so part of: TREMTM_RS01175
location: complement(239429..241032)
location: region:239429-241032:-1
so has part: feature:239429-241032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239429-241032:-1:exon

TREMTM_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rnpA
locus tag: TREMTM_RS01180
old locus tag: TRABTM_A_02270
so part of: sequence
location: complement(241079..241435)
location: region:241079-241435:-1
so has part: feature:241079-241435:-1:exon
subclass of: SO_0000010

position:241079:-1
position: 241079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241435:-1
position: 241435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241079-241435:-1:exon

TREMTM_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rnpA
locus tag: TREMTM_RS01180
old locus tag: TRABTM_A_02270
EC number: 3.1.26.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1
GO function: GO:0004526 - ribonuclease P activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease P protein component
translation: MIKIAFTRKLRLLTSNDFFFVFQKPHRVGTQYILILSRLNTLGYPRVGFTIAKKYIKKAHERNKIKRLIRESFRRQQHTLPTMDFVVIAKKDFTNFYKNNSAITETLDKLWNYHCLHF
SIO_010081: TREMTM_RS01180
subclass of: SO_0000673
so part of: TREMTM_RS01180
location: complement(241079..241435)
location: region:241079-241435:-1
so has part: feature:241079-241435:-1:exon

WP_083172500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241079-241435:-1:exon

TREMTM_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpmH
locus tag: TREMTM_RS01185
old locus tag: TRABTM_A_02280
so part of: sequence
location: complement(241435..241584)
location: region:241435-241584:-1
so has part: feature:241435-241584:-1:exon
subclass of: SO_0000010

position:241584:-1
position: 241584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241435-241584:-1:exon

TREMTM_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpmH
locus tag: TREMTM_RS01185
old locus tag: TRABTM_A_02280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009873975.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L34
translation: MKRTFQPSVLKRNRTHGFRIRMANKKGRHILARRRAKGRSYLTVSSKEN
SIO_010081: TREMTM_RS01185
subclass of: SO_0000673
so part of: TREMTM_RS01185
location: complement(241435..241584)
location: region:241435-241584:-1
so has part: feature:241435-241584:-1:exon

WP_083172502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241435-241584:-1:exon

TREMTM_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: dnaN
locus tag: TREMTM_RS01190
old locus tag: TRABTM_A_02290
so part of: sequence
location: 241793..242905
location: region:241793-242905:1
so has part: feature:241793-242905:1:exon
subclass of: SO_0000010

position:241793:1
position: 241793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242905:1
position: 242905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241793-242905:1:exon

TREMTM_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: dnaN
locus tag: TREMTM_RS01190
old locus tag: TRABTM_A_02290
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKFIIKREHLIKPLQQVSNTLGVRRPLLPILNNILLQINKDNLLLTGTDLELEIVAKVVLNNFYEQSVATTVPARKFFDICRGLPAEAEIAVTLVEGERILIKSGRSRYLLSTLPAVNFPNIDDWQIIVQFTIKQSSLKKLIESTQFSMAHQDVRYYLNGMLFETEVDALRAVATDGHRLAMCVIPVIGNILPLHSVIIPRKSIIELVRILDSSDNPVKVQIGSNNIRISVGNYMFTSKLVNGRFPDYRRVFLKNPDKKIEAKCEALKQALTRAAILSSDRFHGVRLYLSTNQLKITANNPKQEEAEEIIDAYYHGSEVEIAFNVSYVLDVLNALKCDVVRILLTDGVSSVQIVDSANKVAIYIIMPIRL
SIO_010081: TREMTM_RS01190
subclass of: SO_0000673
so part of: TREMTM_RS01190
location: 241793..242905
location: region:241793-242905:1
so has part: feature:241793-242905:1:exon

WP_083172504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241793-242905:1:exon

TREMTM_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: fmt
locus tag: TREMTM_RS01195
old locus tag: TRABTM_A_02300
so part of: sequence
location: complement(243005..243958)
location: region:243005-243958:-1
so has part: feature:243005-243958:-1:exon
subclass of: SO_0000010

position:243005:-1
position: 243005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243958:-1
position: 243958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243005-243958:-1:exon

TREMTM_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: fmt
locus tag: TREMTM_RS01195
old locus tag: TRABTM_A_02300
EC number: 2.1.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209020.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionyl-tRNA formyltransferase
translation: MLYSLRILFAGTPNFASCHLNALINTKHNLIGVLTQPDRPAGHGNIFTPSPVKQLAESYNVPVFQPFSLHNIEVQRCIEELNADILVVVAYSMILPKAVLDIPKIGCINVHGSLLPKWRGAAPIHRALLAGDDFTGITIIKMDAGLDTGPVLYRNICTIQPDDTSASLYAKLAKMGSNALLKTLELLIAGSVTAEPQNNELASYAYKISKEEARIDWSLSAVQLERCIRAFNPWPISYFLINGHYIRVWAARVNKQLHTASYLPGTIFAADKKGIHITTGDGILTLTKLQPESKKVMQVHELLNSRRELFIPGMVLV
SIO_010081: TREMTM_RS01195
subclass of: SO_0000673
so part of: TREMTM_RS01195
location: complement(243005..243958)
location: region:243005-243958:-1
so has part: feature:243005-243958:-1:exon

WP_156763248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243005-243958:-1:exon

TREMTM_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: def
locus tag: TREMTM_RS01200
old locus tag: TRABTM_A_02310
so part of: sequence
location: complement(244009..244473)
location: region:244009-244473:-1
so has part: feature:244009-244473:-1:exon
subclass of: SO_0000010

position:244009:-1
position: 244009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244473:-1
position: 244473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244009-244473:-1:exon

TREMTM_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: def
locus tag: TREMTM_RS01200
old locus tag: TRABTM_A_02310
EC number: 3.5.1.88
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312179.1
GO function: GO:0042586 - peptide deformylase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide deformylase
translation: MALLQVLHYPDERLRKIAKPVAEINDTIQRIVDDMFETMYAEDGIGLAATQVDIHQRIIVIDVSENRDQRLVLINPEILKKSGKIGLDEGCLSIPGFRGFVSRAETIKVLALDRTGKFFKFEADAILAICIQHEIDHLVGRLFIDYLSPKTSAL
SIO_010081: TREMTM_RS01200
subclass of: SO_0000673
so part of: TREMTM_RS01200
location: complement(244009..244473)
location: region:244009-244473:-1
so has part: feature:244009-244473:-1:exon

WP_083172508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244009-244473:-1:exon

TREMTM_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01205
old locus tag: TRABTM_A_T0370
so part of: sequence
location: 244656..244728
location: region:244656-244728:1
so has part: feature:244656-244728:1:exon
subclass of: SO_0000663

position:244656:1
position: 244656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244728:1
position: 244728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244656-244728:1:exon

TREMTM_RS01205
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS01205
old locus tag: TRABTM_A_T0370
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:244690..244692,aa:Glu,seq:ttc)
SIO_010081: TREMTM_RS01205
subclass of: SO_0000673
so part of: TREMTM_RS01205
location: 244656..244728
location: region:244656-244728:1
so has part: feature:244656-244728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244656-244728:1:exon

TREMTM_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: efp
locus tag: TREMTM_RS01210
old locus tag: TRABTM_A_02320
so part of: sequence
location: complement(244739..245305)
location: region:244739-245305:-1
so has part: feature:244739-245305:-1:exon
subclass of: SO_0000010

position:244739:-1
position: 244739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245305:-1
position: 245305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244739-245305:-1:exon

TREMTM_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: efp
locus tag: TREMTM_RS01210
old locus tag: TRABTM_A_02320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor P
translation: MVYYYSTKEFSCGIKIMFDGEPCSIIDNQFVNPGKGQAFNRVRMKKLISGKILEKVFKSGRLVEAADVIDINFIYLYNDGKFCYFMNNSNFEQLAVNIKLVGDTIKWMVEQTEYVITLWNGQVIAVTTPNFVALKIIKTDPYGYNISTSGKKIAILTTGAIVKVPLFVNVGEIIKVDTRSSEYVSREK
SIO_010081: TREMTM_RS01210
subclass of: SO_0000673
so part of: TREMTM_RS01210
location: complement(244739..245305)
location: region:244739-245305:-1
so has part: feature:244739-245305:-1:exon

WP_083172510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244739-245305:-1:exon

TREMTM_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01215
so part of: sequence
location: complement(245289..245402)
location: region:245289-245402:-1
so has part: feature:245289-245402:-1:exon
subclass of: SO_0000010

position:245289:-1
position: 245289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245402:-1
position: 245402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245289-245402:-1:exon

TREMTM_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01215
inference: COORDINATES: protein motif:HMM:NF019814.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDGEPCSIIDNQFVNPGKGQALFSLLKITIYYGILL
SIO_010081: TREMTM_RS01215
subclass of: SO_0000673
so part of: TREMTM_RS01215
location: complement(245289..245402)
location: region:245289-245402:-1
so has part: feature:245289-245402:-1:exon

WP_083172512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245289-245402:-1:exon

TREMTM_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: groL
locus tag: TREMTM_RS01220
old locus tag: TRABTM_A_02340
so part of: sequence
location: complement(245547..247184)
location: region:245547-247184:-1
so has part: feature:245547-247184:-1:exon
subclass of: SO_0000010

position:245547:-1
position: 245547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247184:-1
position: 247184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245547-247184:-1:exon

TREMTM_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: groL
locus tag: TREMTM_RS01220
old locus tag: TRABTM_A_02340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperonin GroEL
translation: MTAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPAITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVVAAVAELRKLSVPCSDSKAIAQVGTISANSDETVGTLIAEAMAKVGKEGVITVEEGSGLQDELDVVEGMQFDRGYLSPYFVNKQETGIVELESPFILLVDKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVTAVKAPGFGDRRKAMMQDIAILTSGTVISEEIGLELEKAKLEDMGQAKRVVITKDTTTIIDGMGDKALISSRVAQINQQRDEATSDYDREKLQERIAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVANSIAELKGNNEDQNVGIKVARRAMESTLRQIVANAGEEPSVIANKVKASEGDIGYNAATEEYGNMIDMGILDPTKVTRSALQYAASIAGLMITTECMVTELPKDEKTDMGSANGGMGSGSMM
SIO_010081: TREMTM_RS01220
subclass of: SO_0000673
so part of: TREMTM_RS01220
location: complement(245547..247184)
location: region:245547-247184:-1
so has part: feature:245547-247184:-1:exon

WP_083172654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245547-247184:-1:exon

TREMTM_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01225
old locus tag: TRABTM_A_02350
so part of: sequence
location: complement(247246..247539)
location: region:247246-247539:-1
so has part: feature:247246-247539:-1:exon
subclass of: SO_0000010

position:247246:-1
position: 247246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247539:-1
position: 247539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247246-247539:-1:exon

TREMTM_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01225
old locus tag: TRABTM_A_02350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015835839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone GroES
translation: MKIRPLHDRVIVKRKEIEAKSAGGIVLTGSAAGKSTRGEVLAVGRGRILENGEVKALDVKVGDIVIFNEGYSVKVEKIDNDEVLIMSENDILAIVED
SIO_010081: TREMTM_RS01225
subclass of: SO_0000673
so part of: TREMTM_RS01225
location: complement(247246..247539)
location: region:247246-247539:-1
so has part: feature:247246-247539:-1:exon

WP_083172514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247246-247539:-1:exon

TREMTM_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: mutL
locus tag: TREMTM_RS01230
old locus tag: TRABTM_A_02360
so part of: sequence
location: 248031..249893
location: region:248031-249893:1
so has part: feature:248031-249893:1:exon
subclass of: SO_0000010

position:248031:1
position: 248031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249893:1
position: 249893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248031-249893:1:exon

TREMTM_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: mutL
locus tag: TREMTM_RS01230
old locus tag: TRABTM_A_02360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015580547.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair endonuclease MutL
translation: MSIKVLPPHIANQIAAGEVVFRPASVVKEIIENSLDAGATRIEINIERGGTKRISIIDNGNGIAKEELKIALKRHSTSKITSMKDLENITSMGFRGEALNSISSVSRLTLTSRTTSQNEAWQVYSEGSDLAVTLKPAAHPVGTTIEVLDLFYNMPARRKFMRTEKTEFTYIDEIIRRMALSRFDVTFILQHNGKIVRNYLAVSQQRKHRSRMIKICGTAFVEQSLEIYWQHNSNIAIQGWISNPTCKKINMQYIYVNKRTIRNNKLIKNAVLQAYQEKITGTQHPAFVLFLDVKSNKVDINVHPTKNDVLFYHNRLIHDFIYQAVVTALQHHNFISEKIKIIKNSQSSGHNSFSNHDDTLISSVSHPTGWMPHELQKEQRNILEKPLKLGDGINLVEKKQYGSTCNDTIKINATRINKNKPDMISGNYYSFGRILTLIAPCYALLELENSLALLSLSVANRCLIEYKLTTGIIDDTLIYQPLLIPLRINLCKEKKIVLKYYQQVLKKIGFSFELHRNQATLKAVPLLFKKNLKNLITDLLVYLQLNRVAVTHQQIIVWITNHLHKEKKSVAWNYYQAMQLLADIELIWPQWLKNAQYRLLVTLNVETAIQALNQDKALNE
SIO_010081: TREMTM_RS01230
subclass of: SO_0000673
so part of: TREMTM_RS01230
location: 248031..249893
location: region:248031-249893:1
so has part: feature:248031-249893:1:exon

WP_083172517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248031-249893:1:exon

TREMTM_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: miaA
locus tag: TREMTM_RS01235
old locus tag: TRABTM_A_02370
so part of: sequence
location: 249886..250839
location: region:249886-250839:1
so has part: feature:249886-250839:1:exon
subclass of: SO_0000010

position:249886:1
position: 249886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250839:1
position: 250839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249886-250839:1:exon

TREMTM_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: miaA
locus tag: TREMTM_RS01235
old locus tag: TRABTM_A_02370
EC number: 2.5.1.75
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015966214.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
translation: MNKLNPQNKLNPQAIFLMGPTASGKTKLVIALYKQLPVDIISVDSALIYRGMNIGTAKPDVKQMALVPHRMIDIRDPLDSYSVADFRRDAIKEMTEITEAGRIPLLVGGTMLYFKALLYGLSSQLPPANTEVRYYIKHVAKIVGWNTLHLHLKNIDPIAANRIHQHDLQRLSRALEIFFITGNSITELRKKTGEEVLNYRVHSFAIVPFDRALLHQRIAQRFHMMLAIGFENEVCTLFARGDLNREMSSIRCVGYRQMWSYISNEISYDDMVFSGICATRQLAKRQITWLRRWPNVHYLDIDNQYNALNKILKIISI
SIO_010081: TREMTM_RS01235
subclass of: SO_0000673
so part of: TREMTM_RS01235
location: 249886..250839
location: region:249886-250839:1
so has part: feature:249886-250839:1:exon

WP_083172519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249886-250839:1:exon

TREMTM_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rlmB
locus tag: TREMTM_RS01240
old locus tag: TRABTM_A_02380
so part of: sequence
location: 251378..252115
location: region:251378-252115:1
so has part: feature:251378-252115:1:exon
subclass of: SO_0000010

position:251378:1
position: 251378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252115:1
position: 252115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251378-252115:1:exon

TREMTM_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rlmB
locus tag: TREMTM_RS01240
old locus tag: TRABTM_A_02380
EC number: 2.1.1.185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410207.1
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
translation: MIRIIYGIHTIQSILERNPQRLLDIYLSQSHKNRRLHKLIQQLDKKGLVIKMASRQWLDKKTDGAVHQGIIARVHELQFQEKDLLSLLAQQATPLLLILDSVIDPHNLGACLRCADAAGVHAVIVPRKRTAPLNATAQKVASGAAETVPLIRVTNLARTLRLLQIHKLWIVGTDDKNVDHDLYKSKLTGPLALIMGGENKGMRSLTRKYCDELISIPMAGTVFSLNVSVATGICLFEAVRQRNKK
SIO_010081: TREMTM_RS01240
subclass of: SO_0000673
so part of: TREMTM_RS01240
location: 251378..252115
location: region:251378-252115:1
so has part: feature:251378-252115:1:exon

WP_083172521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251378-252115:1:exon

TREMTM_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: mnmA
locus tag: TREMTM_RS01245
old locus tag: TRABTM_A_02390
so part of: sequence
location: 252416..253519
location: region:252416-253519:1
so has part: feature:252416-253519:1:exon
subclass of: SO_0000010

position:252416:1
position: 252416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253519:1
position: 253519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252416-253519:1:exon

TREMTM_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: mnmA
locus tag: TREMTM_RS01245
old locus tag: TRABTM_A_02390
EC number: 2.8.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410945.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0004808 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]; GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 2-thiouridine(34) synthase MnmA
translation: MSDKKVIVGLSGGVDSSVTAWLLQQQGYLVEGLFMKNWEEYDNEKYCHVANDLVDTQIICDQLGIILHTVNFAAEYWDKVFVKFIAEYQALRTPNPDILCNKEIKFKTFLDFATESLGADFIATGHYVRRYDINGKIRLLRGIDKNKDQSYFLYTLGYTQLSRCLFPIGELVKTEVRRIASKLRLVTATKKDSTGICFIGKRKFRNFIESYLPIAPQGAIVSVDGQQLGYHQGLMYYTLGQRKGLGIGGTRKGNEYPWYVVDKDIKNNQLIVAQGNQHPRLMSTSFVTNQLYWVDREPIREQMYCTVKTRSRQPDINCLVKPISDGHLQVILEHPLAAVTPGQSAVFYLEERCLGGGIIKSNKLLSY
SIO_010081: TREMTM_RS01245
subclass of: SO_0000673
so part of: TREMTM_RS01245
location: 252416..253519
location: region:252416-253519:1
so has part: feature:252416-253519:1:exon

WP_083172656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252416-253519:1:exon

TREMTM_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: mfd
locus tag: TREMTM_RS01250
old locus tag: TRABTM_A_02400
so part of: sequence
location: 253872..255911
location: region:253872-255911:1
so has part: feature:253872-255911:1:exon
subclass of: SO_0000010

position:253872:1
position: 253872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255911:1
position: 255911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253872-255911:1:exon

TREMTM_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: mfd
locus tag: TREMTM_RS01250
old locus tag: TRABTM_A_02400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410935.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription-repair coupling factor
translation: MHNNVAMHEGQLMVHLEHGIGRYDGMTTIEIGGIKSEYLILTYADNDKLYVPVYSLHLISNYDCCTDNVPLHKLGSDVWTRARKKAADRVRDVASELLDIYAQRASKSGFAFYYNKKKYQRFCEQFQFELTVDQVQVINEVLSDMCKPLAMDRLICGDVGFGKTEIAMRAAFLAIENNKQVAVLVPTTLLAQQHFENFSERFANLTVKIDIISRFRSASNRNLILDNTAKGKVDILIGTHILLQGKVKWHNLGLLILDEEHRFGVLHKERFKAIRSDIDILTLTATPIPRTLNMAMSGMRNISIISTPPASRLMVKTFVCEYDALVVRKAILREVLRGGQVYYLSNNVDNIEKTARRLENLVPEARINIGHGQLRDRDLEKVMNDFYHNRFNVLVCTTIIETGINIANANTIIIEQANQFGLAQLHQLRGRVGRSHHQAYAYLLTSSPKSLSKETHKRLKAIASLEELGAGFALATHDLEIRGYGELLGSNQSGQIKAMGFTLYTKILKNAVEAIKYGREPSLENLTSITDIELHIPAILPEEYIPNVNTRLSLYKRIASVEDYCELEKLKIEIIDRFGMMPKQARYLLMITVIRQRAQSLGIQRIEGSNKGGAIIFSKNNCIDPTYILKLIEQEPNTYRLDGPTSFKFICDLSNFTTRLQYIDDILVKLQQHTLKKLP
SIO_010081: TREMTM_RS01250
subclass of: SO_0000673
so part of: TREMTM_RS01250
location: 253872..255911
location: region:253872-255911:1
so has part: feature:253872-255911:1:exon

WP_269446331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253872-255911:1:exon

TREMTM_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01255
old locus tag: TRABTM_A_02401
pseudo: true
so part of: sequence
location: complement(255920..256236)
location: region:255920-256236:-1
so has part: feature:255920-256236:-1:exon
subclass of: SO_0000010

position:255920:-1
position: 255920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256236:-1
position: 256236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255920-256236:-1:exon

TREMTM_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01255
old locus tag: TRABTM_A_02401
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014069796.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: HIT domain-containing protein
SIO_010081: TREMTM_RS01255
subclass of: SO_0000673
so part of: TREMTM_RS01255
location: complement(255920..256236)
location: region:255920-256236:-1
so has part: feature:255920-256236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255920-256236:-1:exon

TREMTM_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01260
old locus tag: TRABTM_A_02410
so part of: sequence
location: complement(256287..257087)
location: region:256287-257087:-1
so has part: feature:256287-257087:-1:exon
subclass of: SO_0000010

position:256287:-1
position: 256287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257087:-1
position: 257087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256287-257087:-1:exon

TREMTM_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01260
old locus tag: TRABTM_A_02410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410927.1
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent hydrolase
translation: MFLIDSHCHIDNLNYKTLHLNVADVVKKARLHNVKLILAVCTTLSSFYDMKAMIGCRDDVLFSCGIHPLNINEPYDFAEMQLLASEKSVVALGETGLDYYYQKDNKAQQQEVFREHIRVGRALKKPVIVHNRCAQEDTIVILRNENVSECGGVLHCFNEDRITAKKLLDIGFYISFSGMVTFKNAETLRETVRYVPIDQLLLETDSPYLTPVPYRGKENQPAYVRHIAEFIAKLKGVSLINLAKVTTENFGRLFNLDMQHYLDLDT
SIO_010081: TREMTM_RS01260
subclass of: SO_0000673
so part of: TREMTM_RS01260
location: complement(256287..257087)
location: region:256287-257087:-1
so has part: feature:256287-257087:-1:exon

WP_083172525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256287-257087:-1:exon

TREMTM_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01265
old locus tag: TRABTM_A_02420
so part of: sequence
location: complement(257101..258096)
location: region:257101-258096:-1
so has part: feature:257101-258096:-1:exon
subclass of: SO_0000010

position:257101:-1
position: 257101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258096:-1
position: 258096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257101-258096:-1:exon

TREMTM_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01265
old locus tag: TRABTM_A_02420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014889182.1
note: catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit delta' C-terminal domain-containing protein
translation: MKWYPWLNRPYRQILNCYQQNSGHHALLLHSQQGNGELSLCYAIIRWLMCQQHNGIKSCGICHSCQLMKSGNHPDFYQLEIETDSKILGVNSIRTIIDRVYERARQGGVKIVWLPQSDYLTVQAATALLKTIEEPPEDTYFLLGCQKRLRLLPTLRSRCLYWSLLAPEESIGILWLKQYGYYDLLSARTALRLCSGAVPAAEVLLQPKRWQERLNLCDALQNAYTNSDFLALLPSLNKDDNGPLYWLLSFLSDALKWQQGAQEFLVNSDRTLLVDSIAARWPAIVLHSQWQQWLYCLRQLQEINVTNSELLLTHYLLNWEHGIVENYIYSQ
SIO_010081: TREMTM_RS01265
subclass of: SO_0000673
so part of: TREMTM_RS01265
location: complement(257101..258096)
location: region:257101-258096:-1
so has part: feature:257101-258096:-1:exon

WP_083172527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257101-258096:-1:exon

TREMTM_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: mnmG
locus tag: TREMTM_RS01270
old locus tag: TRABTM_A_02430
so part of: sequence
location: complement(258139..260031)
location: region:258139-260031:-1
so has part: feature:258139-260031:-1:exon
subclass of: SO_0000010

position:258139:-1
position: 258139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260031:-1
position: 260031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258139-260031:-1:exon

TREMTM_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: mnmG
locus tag: TREMTM_RS01270
old locus tag: TRABTM_A_02430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011144461.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
translation: MFFYPDHFDVIVIGGGHAGTEAAMASARIGCKTLLLTHSIDTLGQMSCNPSIGGIGKGHLVKEIDAMGGLMAQAIDQAGIHFRILNYSKGPAVRATRAQADRVLYRQAVRCALEKQPNLTIFQQTVEDLIIKVDRVVGVVTQTKTKLSASAVVLTVGTFLNGRIHIGMDNYSGGRAGDLPSISLSYCLRKLPLRVNRLKTGTPPRIDARSINFSQLAVQHGDNPLPFFSFLGSDDKHQQQIPCYITYTNENTHDIIRNNLDRSPLYAGIIDSVGPRYCPSIEDKILRFADRNAHQVFLEPEGLTSNEIYPNGISTSLPFDVQIKIVQSIKGLEKACIMRPGYAIEYDFFDPRDLKLTLESKLIKRLFLAGQINGTTGYEEAAAQGMLAGLNAARLVKDKEEWSPRRDQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLLLREDNADLRLTEIGRKLKMVDDVRWASFCLKQELLEQERQRLRNIWVNPYSKGIDKLNLLLKSPLIREYNGEELLRRPEINYCNLTNFDLFSPSVEDKKVAEQIEIQIKYQGYIARQQDDIMRQIRYEHIKIPEYINFSDISGLSNEARDKLNDHKPCSIGQASRISGITSASISILLVWLKKQGLLHHNN
SIO_010081: TREMTM_RS01270
subclass of: SO_0000673
so part of: TREMTM_RS01270
location: complement(258139..260031)
location: region:258139-260031:-1
so has part: feature:258139-260031:-1:exon

WP_083172529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258139-260031:-1:exon

TREMTM_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rluC
locus tag: TREMTM_RS01275
old locus tag: TRABTM_A_02440
so part of: sequence
location: complement(260180..261130)
location: region:260180-261130:-1
so has part: feature:260180-261130:-1:exon
subclass of: SO_0000010

position:260180:-1
position: 260180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261130:-1
position: 261130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260180-261130:-1:exon

TREMTM_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rluC
locus tag: TREMTM_RS01275
old locus tag: TRABTM_A_02440
EC number: 5.4.99.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014729140.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA pseudouridine(955/2504/2580) synthase RluC
translation: MKTQNTFVHFITISEDEAGQRIDNFLHTHLKGMPRSMIYRIVRKGEVRVNKKRIKHAYKLKNNDKVRIPPVIYKNKVSLSPYSNKFAALNDAVIYEDDYLLVLNKPAGTAVHGGSSIHFGVIEILRALRPSAHFLELVHRLDRDTSGVLLVAKKRSALIALHDQLRTKKMQKYYLALVRGQWQLHLKKVAEPLFKKTLARGERIVRVTSKGKPSETRFKVKEPFKLATLVLASPITGRTHQIRVHAQYAGHPIALDRRYGDSTFDQQLRCCGLHRLFLHAVALRFFHPGNGEILHIEAPLDKHLRQCLLYLRAHYK
SIO_010081: TREMTM_RS01275
subclass of: SO_0000673
so part of: TREMTM_RS01275
location: complement(260180..261130)
location: region:260180-261130:-1
so has part: feature:260180-261130:-1:exon

WP_083172531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260180-261130:-1:exon

TREMTM_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rne
locus tag: TREMTM_RS01280
old locus tag: TRABTM_A_02450
pseudo: true
so part of: sequence
location: 261404..>263473
location: region:261404-263473:1
so has part: feature:261404-263473:1:exon
subclass of: SO_0000010

position:261404:1
position: 261404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263473:1
position: 263473
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261404-263473:1:exon

TREMTM_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rne
locus tag: TREMTM_RS01280
old locus tag: TRABTM_A_02450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004157094.1
GO function: GO:0008995 - ribonuclease E activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ribonuclease E
SIO_010081: TREMTM_RS01280
subclass of: SO_0000673
so part of: TREMTM_RS01280
location: 261404..>263473
location: region:261404-263473:1
so has part: feature:261404-263473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261404-263473:1:exon

TREMTM_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01285
old locus tag: TRABTM_A_02460
pseudo: true
so part of: sequence
location: 263634..>264512
location: region:263634-264512:1
so has part: feature:263634-264512:1:exon
subclass of: SO_0000010

position:263634:1
position: 263634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264512:1
position: 264512
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263634-264512:1:exon

TREMTM_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
locus tag: TREMTM_RS01285
old locus tag: TRABTM_A_02460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013359538.1
note: has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA polymerase I
SIO_010081: TREMTM_RS01285
subclass of: SO_0000673
so part of: TREMTM_RS01285
location: 263634..>264512
location: region:263634-264512:1
so has part: feature:263634-264512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263634-264512:1:exon

TREMTM_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: yihA
locus tag: TREMTM_RS01290
old locus tag: TRABTM_A_02470
so part of: sequence
location: complement(264723..265349)
location: region:264723-265349:-1
so has part: feature:264723-265349:-1:exon
subclass of: SO_0000010

position:264723:-1
position: 264723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265349:-1
position: 265349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264723-265349:-1:exon

TREMTM_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: yihA
locus tag: TREMTM_RS01290
old locus tag: TRABTM_A_02470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855611.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTP-binding protein YihA/YsxC
translation: MKKYFNYLGTYFLFSVPNIRLLPVNNGIEIAFVGRSNSGKSSAINTLTSNKSLAKTSKTPGRTQLINFFEVEPGLRIVDLPGYGYAKVPENIKRQWQHTISEYLQRRDNLKGLVVLMDIRHPMKYLDQKIIILAKNLNIPILILLTKSDKLTYKARNDQLNKVRKMTIPLFKGDIHIEIFSSIKKHGVETLRQKLNTWFSIKCTILQK
SIO_010081: TREMTM_RS01290
subclass of: SO_0000673
so part of: TREMTM_RS01290
location: complement(264723..265349)
location: region:264723-265349:-1
so has part: feature:264723-265349:-1:exon

WP_083172537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264723-265349:-1:exon

TREMTM_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: typA
locus tag: TREMTM_RS01295
old locus tag: TRABTM_A_02480
so part of: sequence
location: 265466..267280
location: region:265466-267280:1
so has part: feature:265466-267280:1:exon
subclass of: SO_0000010

position:265466:1
position: 265466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267280:1
position: 267280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265466-267280:1:exon

TREMTM_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: typA
locus tag: TREMTM_RS01295
old locus tag: TRABTM_A_02480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855603.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translational GTPase TypA
translation: MIKKLRNIAIIAHVDHGKTTLVDKLLQQSGTISERSSTLERVMDYNYLEKERGITIFAKNTAINWRDYRINIVDTPGHSDFGGEVERVMSMVDSVLLLVDAIDGPMPQTRFVTQKAFLHSLKPIVVINKVDRPGSRPDWVVDQVFDLFVNLGATNEQLDFPIVYTSALNGIAGLEHENMSNDMTPLFESIVKNVDAPQIYANGLFQMQISQLDYNSYVGVIGIGRIKRGYVKKNQHVTILDKEGKRRNGKVGKILSYIGLQRIEVKIAEAGDIIAITGLGKLNISDTICDSAQIEALPPLIIDEPTVSMSFGVNTSPFCGREGKYVTSRQIRDRLNKELVHNVALRVEETDDPDTFCVSGRGELHLSVLIENMRREGFEIAVSRPKVIFRTVDGVKQEPFESLILDIEEQHQGQVMDSIGVRKGVICDMLPDRKGRVRLNYVIPSRGLLGFRTDFLTMTSGTGLLHSTFSHYDNVLTGKIGQRKYGVLISNGQGKTVAYALYGLQDRGRLFLGHGVEVYKGQIIGIHNRSNDLTVNCLMGKKLTNLRASGTDEATNLIPLIKMSLEQAIEFVDDDELVEVTPQSIRLRKRYLTENERKRAHRSN
SIO_010081: TREMTM_RS01295
subclass of: SO_0000673
so part of: TREMTM_RS01295
location: 265466..267280
location: region:265466-267280:1
so has part: feature:265466-267280:1:exon

WP_083172539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265466-267280:1:exon

TREMTM_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplQ
locus tag: TREMTM_RS01300
old locus tag: TRABTM_A_02490
so part of: sequence
location: complement(267294..267668)
location: region:267294-267668:-1
so has part: feature:267294-267668:-1:exon
subclass of: SO_0000010

position:267294:-1
position: 267294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267668:-1
position: 267668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267294-267668:-1:exon

TREMTM_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplQ
locus tag: TREMTM_RS01300
old locus tag: TRABTM_A_02490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017374137.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L17
translation: MHHRKIGRQLNRNSSHLKAMFRNMASSLVYYEIIKTTLPKAKELRRFVEPLVTIAKNDSVANRRLAFSRIRDNVIVTKLFNELGPRFKIRAGGYTRILKCGFRTGDNAPMAYIEFVDRDKKITE
SIO_010081: TREMTM_RS01300
subclass of: SO_0000673
so part of: TREMTM_RS01300
location: complement(267294..267668)
location: region:267294-267668:-1
so has part: feature:267294-267668:-1:exon

WP_083172541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267294-267668:-1:exon

TREMTM_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpoA
locus tag: TREMTM_RS01305
old locus tag: TRABTM_A_02500
so part of: sequence
location: complement(267691..268668)
location: region:267691-268668:-1
so has part: feature:267691-268668:-1:exon
subclass of: SO_0000010

position:267691:-1
position: 267691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268668:-1
position: 268668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267691-268668:-1:exon

TREMTM_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpoA
locus tag: TREMTM_RS01305
old locus tag: TRABTM_A_02500
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
translation: MQNSVTDFLKPRLVDIEKISSTHAKVTLEPLERGFGHTIGNALRRILLSSIPGYAVTEVKMDGVLHEYSSKEGVQEDILEILLNLKCLAVKVNGENDVILNLNKSGIGPVIAADITYNSNIEIINPQHILCHLTDKNASINMQIKIQLGRGYVPASTRINKDEYKPIGLLMVDACYSPIERISYNVEAARVKHRTDLDKLVIDIETNGTLDPEEAIRRSATILAEQLEAFVDLRDIRHQEIKEEKTDFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLALHGLSLGMCLDNWPPASN
SIO_010081: TREMTM_RS01305
subclass of: SO_0000673
so part of: TREMTM_RS01305
location: complement(267691..268668)
location: region:267691-268668:-1
so has part: feature:267691-268668:-1:exon

WP_083172543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267691-268668:-1:exon

TREMTM_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsD
locus tag: TREMTM_RS01310
old locus tag: TRABTM_A_02510
so part of: sequence
location: complement(268736..269356)
location: region:268736-269356:-1
so has part: feature:268736-269356:-1:exon
subclass of: SO_0000010

position:268736:-1
position: 268736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269356:-1
position: 269356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268736-269356:-1:exon

TREMTM_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsD
locus tag: TREMTM_RS01310
old locus tag: TRABTM_A_02510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MARYLGPKLKLSRRENTDLFLKSGVQAINSKCKIEQIPGQHGTRKIRLSDYGIQLREKQKVRRIYGVLERQFHNYYKEAVRRKGNTGENLLQLLESRLDNVVYRIGFGATRAESRQLVSHKAIIVNGRIVNIASYQVTKNDVISINEKAKKQSRIMASLELSNQREKPTWIEINFDKMEGIFKKYPERTDLSADINEHLIVELYSK
SIO_010081: TREMTM_RS01310
subclass of: SO_0000673
so part of: TREMTM_RS01310
location: complement(268736..269356)
location: region:268736-269356:-1
so has part: feature:268736-269356:-1:exon

WP_083172545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268736-269356:-1:exon

TREMTM_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsK
locus tag: TREMTM_RS01315
old locus tag: TRABTM_A_02520
so part of: sequence
location: complement(269402..269791)
location: region:269402-269791:-1
so has part: feature:269402-269791:-1:exon
subclass of: SO_0000010

position:269402:-1
position: 269402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269791:-1
position: 269791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269402-269791:-1:exon

TREMTM_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsK
locus tag: TREMTM_RS01315
old locus tag: TRABTM_A_02520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MNKIPPKTRNRIKKQVLDGIAHIYASFNNTIITITDRQGNTLGWATSGCSGFRGSRKSTPFASQVAAERCTEAVKEYGIKNLEVMIKGPGPGRESTIRALNAAGFHITNITDVTPIPHNGCRPPKKRRV
SIO_010081: TREMTM_RS01315
subclass of: SO_0000673
so part of: TREMTM_RS01315
location: complement(269402..269791)
location: region:269402-269791:-1
so has part: feature:269402-269791:-1:exon

WP_083172547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269402-269791:-1:exon

TREMTM_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsM
locus tag: TREMTM_RS01320
old locus tag: TRABTM_A_02530
so part of: sequence
location: complement(269801..270157)
location: region:269801-270157:-1
so has part: feature:269801-270157:-1:exon
subclass of: SO_0000010

position:269801:-1
position: 269801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270157:-1
position: 270157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269801-270157:-1:exon

TREMTM_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsM
locus tag: TREMTM_RS01320
old locus tag: TRABTM_A_02530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MVRIAGINIPDNKHTVIALTSIFGIGKSCSKHICAATGIAENIKINDLSEEQLEKLRDAVAKFVVEGDLRRELTINIKRLIDLNTYRGLRHRRNLPVHGQRTKTNARTCKGTRKKVNK
SIO_010081: TREMTM_RS01320
subclass of: SO_0000673
so part of: TREMTM_RS01320
location: complement(269801..270157)
location: region:269801-270157:-1
so has part: feature:269801-270157:-1:exon

WP_083172549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269801-270157:-1:exon

TREMTM_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpmJ
locus tag: TREMTM_RS01325
old locus tag: TRABTM_A_02531
so part of: sequence
location: complement(270196..270312)
location: region:270196-270312:-1
so has part: feature:270196-270312:-1:exon
subclass of: SO_0000010

position:270196:-1
position: 270196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270312:-1
position: 270312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270196-270312:-1:exon

TREMTM_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpmJ
locus tag: TREMTM_RS01325
old locus tag: TRABTM_A_02531
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006232360.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVRASVKKICHNCKIIKRNGVVCVICSVAPKHKQRQG
SIO_010081: TREMTM_RS01325
subclass of: SO_0000673
so part of: TREMTM_RS01325
location: complement(270196..270312)
location: region:270196-270312:-1
so has part: feature:270196-270312:-1:exon

WP_083172551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270196-270312:-1:exon

TREMTM_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: secY
locus tag: TREMTM_RS01330
old locus tag: TRABTM_A_02540
so part of: sequence
location: complement(270344..271669)
location: region:270344-271669:-1
so has part: feature:270344-271669:-1:exon
subclass of: SO_0000010

position:270344:-1
position: 270344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271669:-1
position: 271669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270344-271669:-1:exon

TREMTM_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: secY
locus tag: TREMTM_RS01330
old locus tag: TRABTM_A_02540
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312192.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecY
translation: MDKDKKIEWNVKRGIKELKSRFLFVIGSLIVFRIGSFIPIPGINSTVFTKLIEQQRSTIIDMFNMFSGGALNRASVFALGIMPYISSSIIIQLLTVIHPTLSEIKKEGEFGIQKINQYARYGALVLAIFQAISFTIGLPNMPEMQSLVIIPGISFYLTAILSLVCGTIFLMWLGEQITDRGIGNGISLIIFTGIIAGLPTAISYTIKQTIKGYFPFLCLLLVAFLVFAVTFFVIFIEHGQRRIIVNYAKHQQQGRCVYLNQNTHLPLKVNMAGVLPAIFASSIILFPATIVSWFGGSPYCGWLTNISLYLQPGQPLYALLYASAIIFLCYFYTTIVLNSRETADNLKKLGVFVPGIRPGEQTAKYIDQVMNRLTLVGAMYITFICLIPEFMRNAMKVPFYFGGTSLLIVVVVIMDFMTQVQTMSTQYEYAFLKETLKSYNR
SIO_010081: TREMTM_RS01330
subclass of: SO_0000673
so part of: TREMTM_RS01330
location: complement(270344..271669)
location: region:270344-271669:-1
so has part: feature:270344-271669:-1:exon

WP_083172553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270344-271669:-1:exon

TREMTM_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplO
locus tag: TREMTM_RS01335
old locus tag: TRABTM_A_02550
so part of: sequence
location: complement(271672..272115)
location: region:271672-272115:-1
so has part: feature:271672-272115:-1:exon
subclass of: SO_0000010

position:271672:-1
position: 271672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272115:-1
position: 272115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271672-272115:-1:exon

TREMTM_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplO
locus tag: TREMTM_RS01335
old locus tag: TRABTM_A_02550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MRLNDLSPADGSKFASKRLGRGIGSGLGKTSGRGHKGQKSRSGGKIYRGFEGGQMPLCRRLPKFGFNSHKAILTAEVSLSDLANIEGNIVDIKVLKSAKIVNIKTKCAKIILSGKIKKAVTIITTAGIRISKGARYAIEAAGGKFEE
SIO_010081: TREMTM_RS01335
subclass of: SO_0000673
so part of: TREMTM_RS01335
location: complement(271672..272115)
location: region:271672-272115:-1
so has part: feature:271672-272115:-1:exon

WP_083172555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271672-272115:-1:exon

TREMTM_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpmD
locus tag: TREMTM_RS01340
old locus tag: TRABTM_A_02560
so part of: sequence
location: complement(272119..272301)
location: region:272119-272301:-1
so has part: feature:272119-272301:-1:exon
subclass of: SO_0000010

position:272119:-1
position: 272119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272301:-1
position: 272301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272119-272301:-1:exon

TREMTM_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpmD
locus tag: TREMTM_RS01340
old locus tag: TRABTM_A_02560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704129.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L30
translation: MIKNIKIIQIRSSIGCLPKHKATLVGLGLRHIGHTIVREDTTAIRGMINLISYMVRIIEE
SIO_010081: TREMTM_RS01340
subclass of: SO_0000673
so part of: TREMTM_RS01340
location: complement(272119..272301)
location: region:272119-272301:-1
so has part: feature:272119-272301:-1:exon

WP_083172557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272119-272301:-1:exon

TREMTM_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsE
locus tag: TREMTM_RS01345
old locus tag: TRABTM_A_02570
so part of: sequence
location: complement(272311..272811)
location: region:272311-272811:-1
so has part: feature:272311-272811:-1:exon
subclass of: SO_0000010

position:272311:-1
position: 272311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272811:-1
position: 272811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272311-272811:-1:exon

TREMTM_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsE
locus tag: TREMTM_RS01345
old locus tag: TRABTM_A_02570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002445361.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MAQIEKKSVFLQEKLIAVNRVSKTVKGGRIFSFSAMIVVGNGNGRVGFGYGKAREVPSAIQKAIEKARRNMINIAIKSGTLQHPIKGTYTGSVVFMKPAFKGTGIIAGGAMRAIFEVAGIHNVLAKAYGSTNPINVIRATIEALIKMNSPEIIAAKRGKLVEEIRN
SIO_010081: TREMTM_RS01345
subclass of: SO_0000673
so part of: TREMTM_RS01345
location: complement(272311..272811)
location: region:272311-272811:-1
so has part: feature:272311-272811:-1:exon

WP_083172559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272311-272811:-1:exon

TREMTM_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplR
locus tag: TREMTM_RS01350
old locus tag: TRABTM_A_02580
so part of: sequence
location: complement(272826..273176)
location: region:272826-273176:-1
so has part: feature:272826-273176:-1:exon
subclass of: SO_0000010

position:272826:-1
position: 272826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273176:-1
position: 273176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272826-273176:-1:exon

TREMTM_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplR
locus tag: TREMTM_RS01350
old locus tag: TRABTM_A_02580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MNKKIARIRRSIRTKSKIKKLGSMRLVIHRTLRHIYAHIFEPTSYKILVAASTVEKNILEINVTGNKYAASEIGRTIAIRALEKGIKKVSFDRSGFKYHGRVQALANAARIAGLQF
SIO_010081: TREMTM_RS01350
subclass of: SO_0000673
so part of: TREMTM_RS01350
location: complement(272826..273176)
location: region:272826-273176:-1
so has part: feature:272826-273176:-1:exon

WP_083172561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272826-273176:-1:exon

TREMTM_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplF
locus tag: TREMTM_RS01355
old locus tag: TRABTM_A_02590
so part of: sequence
location: complement(273194..273727)
location: region:273194-273727:-1
so has part: feature:273194-273727:-1:exon
subclass of: SO_0000010

position:273194:-1
position: 273194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273727:-1
position: 273727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273194-273727:-1:exon

TREMTM_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplF
locus tag: TREMTM_RS01355
old locus tag: TRABTM_A_02590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MSRVAKTPVIIPAGVDVKIKGKDIFMKGKNGELIYTIHEMINIEYANKQLTFAPTINNKKYAAIAGTTRSLINGMVIGVTYGFIKKLQLVGVGYRATVKDNIVNLSLGFSHPINYNLPKGITAECTTQNEIIIKGSNKQILGQVAADLRNYRRPEPYKGKGVRYADEVIRIKEKNKK
SIO_010081: TREMTM_RS01355
subclass of: SO_0000673
so part of: TREMTM_RS01355
location: complement(273194..273727)
location: region:273194-273727:-1
so has part: feature:273194-273727:-1:exon

WP_083172563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273194-273727:-1:exon

TREMTM_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsH
locus tag: TREMTM_RS01360
old locus tag: TRABTM_A_02600
so part of: sequence
location: complement(273738..274130)
location: region:273738-274130:-1
so has part: feature:273738-274130:-1:exon
subclass of: SO_0000010

position:273738:-1
position: 273738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274130:-1
position: 274130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273738-274130:-1:exon

TREMTM_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsH
locus tag: TREMTM_RS01360
old locus tag: TRABTM_A_02600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MSMQDPIADMLTRIRNGQIAKKTAVYIPNSKVKLAIANLLKEEGFIDNYKVLGSTKLKLEIILKYFKGKPVLENIQRISRPGRRIYNKKNKLPKVMAGMGVAVISSSLGIITDRAARKAGIGGEVICYIA
SIO_010081: TREMTM_RS01360
subclass of: SO_0000673
so part of: TREMTM_RS01360
location: complement(273738..274130)
location: region:273738-274130:-1
so has part: feature:273738-274130:-1:exon

WP_083172565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273738-274130:-1:exon

TREMTM_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsN
locus tag: TREMTM_RS01365
old locus tag: TRABTM_A_02610
so part of: sequence
location: complement(274156..274461)
location: region:274156-274461:-1
so has part: feature:274156-274461:-1:exon
subclass of: SO_0000010

position:274156:-1
position: 274156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274461:-1
position: 274461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274156-274461:-1:exon

TREMTM_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsN
locus tag: TREMTM_RS01365
old locus tag: TRABTM_A_02610
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462331.3
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S14
translation: MAKESMKAREVKRMKLSNKFFKKRTELKNIISSINVADEERWNAVLKLQTLPRDSSPSRKRNRCRQTGRPHAYLRKFGLSRIKVREAAMRGEIPGLRKASW
SIO_010081: TREMTM_RS01365
subclass of: SO_0000673
so part of: TREMTM_RS01365
location: complement(274156..274461)
location: region:274156-274461:-1
so has part: feature:274156-274461:-1:exon

WP_083172567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274156-274461:-1:exon

TREMTM_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplE
locus tag: TREMTM_RS01370
old locus tag: TRABTM_A_02620
so part of: sequence
location: complement(274461..275012)
location: region:274461-275012:-1
so has part: feature:274461-275012:-1:exon
subclass of: SO_0000010

position:275012:-1
position: 275012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274461-275012:-1:exon

TREMTM_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplE
locus tag: TREMTM_RS01370
old locus tag: TRABTM_A_02620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MAKLYEYYKNEVVFQLIKKFNYSSVMQVPNLYKITLNMGVGKSISNQNFLDNAKEYLAAISGQKPIITKARKSIAGFKIRKGYPIGCKVTLRGKRMWDFLERLLFIAIPRIRDFRGLSIKSFDGNGNYNIGVQENIIFPEISYERADNVCGLDIAITTTAKSDNEGCNLLTALNFPFWKEGSY
SIO_010081: TREMTM_RS01370
subclass of: SO_0000673
so part of: TREMTM_RS01370
location: complement(274461..275012)
location: region:274461-275012:-1
so has part: feature:274461-275012:-1:exon

WP_083172570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274461-275012:-1:exon

TREMTM_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplX
locus tag: TREMTM_RS01375
old locus tag: TRABTM_A_02630
so part of: sequence
location: complement(275026..275334)
location: region:275026-275334:-1
so has part: feature:275026-275334:-1:exon
subclass of: SO_0000010

position:275026:-1
position: 275026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275334:-1
position: 275334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275026-275334:-1:exon

TREMTM_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplX
locus tag: TREMTM_RS01375
old locus tag: TRABTM_A_02630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MAAKICIDDEVIVITGKDKGKRGKIKTILPNGKCIINGINLVKKHKKLMPNNSGGILKKESKIDLSNIAIFNLATNKADRVGFKIENSNKFRIFKSNGKLIK
SIO_010081: TREMTM_RS01375
subclass of: SO_0000673
so part of: TREMTM_RS01375
location: complement(275026..275334)
location: region:275026-275334:-1
so has part: feature:275026-275334:-1:exon

WP_083172572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275026-275334:-1:exon

TREMTM_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplN
locus tag: TREMTM_RS01380
old locus tag: TRABTM_A_02640
so part of: sequence
location: complement(275384..275755)
location: region:275384-275755:-1
so has part: feature:275384-275755:-1:exon
subclass of: SO_0000010

position:275384:-1
position: 275384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275755:-1
position: 275755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275384-275755:-1:exon

TREMTM_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplN
locus tag: TREMTM_RS01380
old locus tag: TRABTM_A_02640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005501250.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQEQTMLSVADNSGARRVMCIKVLGGSHRRYANIGNIIKIAIKEAIFRGKVKKGDVLKAVVVRTKKGIRRSDDSLIRFDDNACVLLNDNNDQPIGTRIFGPVTRELRTEKFMKIISLAPEVI
SIO_010081: TREMTM_RS01380
subclass of: SO_0000673
so part of: TREMTM_RS01380
location: complement(275384..275755)
location: region:275384-275755:-1
so has part: feature:275384-275755:-1:exon

WP_083172574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275384-275755:-1:exon

TREMTM_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsQ
locus tag: TREMTM_RS01385
old locus tag: TRABTM_A_02650
so part of: sequence
location: complement(275801..276046)
location: region:275801-276046:-1
so has part: feature:275801-276046:-1:exon
subclass of: SO_0000010

position:275801:-1
position: 275801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276046:-1
position: 276046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275801-276046:-1:exon

TREMTM_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsQ
locus tag: TREMTM_RS01385
old locus tag: TRABTM_A_02650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004929760.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MIHTLQGRVVSNKMEKSIVVIIERFVKHPIYGKFIKRTTKLHVHDENNESNIGDIVEINECRPISKSKSWKLIRVIERAIL
SIO_010081: TREMTM_RS01385
subclass of: SO_0000673
so part of: TREMTM_RS01385
location: complement(275801..276046)
location: region:275801-276046:-1
so has part: feature:275801-276046:-1:exon

WP_083172576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275801-276046:-1:exon

TREMTM_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplP
locus tag: TREMTM_RS01390
old locus tag: TRABTM_A_02660
so part of: sequence
location: complement(276138..276566)
location: region:276138-276566:-1
so has part: feature:276138-276566:-1:exon
subclass of: SO_0000010

position:276138:-1
position: 276138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276566:-1
position: 276566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276138-276566:-1:exon

TREMTM_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplP
locus tag: TREMTM_RS01390
old locus tag: TRABTM_A_02660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975772.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MLQPKRTKFRKMHKGHNRGLAVSMDIKFGSFGLKAIGRGYLTSCQIEAARRAITHEIKHQGRIWIRIFPDKPITKKPLEVRMGKGKGNVEYWVALIQPGKILYEIDGITEELAHEAFNLASAKLPIKTIFIKKHMETTEVFN
SIO_010081: TREMTM_RS01390
subclass of: SO_0000673
so part of: TREMTM_RS01390
location: complement(276138..276566)
location: region:276138-276566:-1
so has part: feature:276138-276566:-1:exon

WP_083172578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276138-276566:-1:exon

TREMTM_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsC
locus tag: TREMTM_RS01395
old locus tag: TRABTM_A_02670
so part of: sequence
location: complement(276612..277277)
location: region:276612-277277:-1
so has part: feature:276612-277277:-1:exon
subclass of: SO_0000010

position:276612:-1
position: 276612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277277:-1
position: 277277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276612-277277:-1:exon

TREMTM_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsC
locus tag: TREMTM_RS01395
old locus tag: TRABTM_A_02670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975771.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGHKVNPNGIRLGIVKLWNSTWYANTKEFANNLDNDFKIRKFLINELSNSFISRIVIDRPANSIMVTIHTARPGLVIGKKGEDIEKLRKIISHIAKLPAQININEIRKPEMDAKLVAESISSQLERRILFRRVMKRAVQNAMRIGAKGIKIEVSGRLGGSEIARTEWYREGCVPLHTLRADIDYSTSEAYTIYGVIGLKVWIFKGEILGNMNTIEHKKTNN
SIO_010081: TREMTM_RS01395
subclass of: SO_0000673
so part of: TREMTM_RS01395
location: complement(276612..277277)
location: region:276612-277277:-1
so has part: feature:276612-277277:-1:exon

WP_083172580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276612-277277:-1:exon

TREMTM_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplV
locus tag: TREMTM_RS01400
old locus tag: TRABTM_A_02680
so part of: sequence
location: complement(277295..277627)
location: region:277295-277627:-1
so has part: feature:277295-277627:-1:exon
subclass of: SO_0000010

position:277295:-1
position: 277295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277627:-1
position: 277627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277295-277627:-1:exon

TREMTM_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplV
locus tag: TREMTM_RS01400
old locus tag: TRABTM_A_02680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: METIAQYRYANSSAQKVRLVANLIRGKKVSQALKELTYNKKKAAGIIKKTIKSAIANAEHNNGVEDIDDLKIAKIFVDIGPSIKRIMPRAKGRADRILKRKNHITVILSI
SIO_010081: TREMTM_RS01400
subclass of: SO_0000673
so part of: TREMTM_RS01400
location: complement(277295..277627)
location: region:277295-277627:-1
so has part: feature:277295-277627:-1:exon

WP_083172582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277295-277627:-1:exon

TREMTM_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsS
locus tag: TREMTM_RS01405
old locus tag: TRABTM_A_02690
so part of: sequence
location: complement(277645..277923)
location: region:277645-277923:-1
so has part: feature:277645-277923:-1:exon
subclass of: SO_0000010

position:277645:-1
position: 277645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277923:-1
position: 277923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277645-277923:-1:exon

TREMTM_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsS
locus tag: TREMTM_RS01405
old locus tag: TRABTM_A_02690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001138116.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MPRSLKKGPFIDLHLLKKIEKAVKIGEKKTIRTWSRRSIIYPAMIGLTIAIHNGRQHVPVFVVDEMVGHKLGEFSPTRTYRGHAADKTTKKN
SIO_010081: TREMTM_RS01405
subclass of: SO_0000673
so part of: TREMTM_RS01405
location: complement(277645..277923)
location: region:277645-277923:-1
so has part: feature:277645-277923:-1:exon

WP_083172584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277645-277923:-1:exon

TREMTM_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplB
locus tag: TREMTM_RS01410
old locus tag: TRABTM_A_02700
so part of: sequence
location: complement(277934..278758)
location: region:277934-278758:-1
so has part: feature:277934-278758:-1:exon
subclass of: SO_0000010

position:277934:-1
position: 277934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278758:-1
position: 278758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277934-278758:-1:exon

TREMTM_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplB
locus tag: TREMTM_RS01410
old locus tag: TRABTM_A_02700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002213425.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MSIVKCKPTSPGRRHVVKIINSNIHKGKPYNKLLKPLNKSGGRNNNGRITMRHIGGGHKKKYRIIDFKRNKDDIPAIIERFEYDPNRSANITLVMYKDGERRYIIAPKGLKVGDQIESGVDVAIKIGNALPMRKIPIGSIIHNVEMKPGKGGQLARSAGSYIQIVSRDSAYVTLRLRSGEIRKINSECRATLGEVDNAEHMLCILGKAGAKRWRGIRSTVRGTAMNPVDHPHGGGEGRNFGKHPVSPWGLQTKGKKTRSNKRTDKFIVCRRIIN
SIO_010081: TREMTM_RS01410
subclass of: SO_0000673
so part of: TREMTM_RS01410
location: complement(277934..278758)
location: region:277934-278758:-1
so has part: feature:277934-278758:-1:exon

WP_083172586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277934-278758:-1:exon

TREMTM_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplD
locus tag: TREMTM_RS01420
old locus tag: TRABTM_A_02720
so part of: sequence
location: complement(279088..279693)
location: region:279088-279693:-1
so has part: feature:279088-279693:-1:exon
subclass of: SO_0000010

position:279088:-1
position: 279088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279693:-1
position: 279693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279088-279693:-1:exon

TREMTM_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplD
locus tag: TREMTM_RS01420
old locus tag: TRABTM_A_02720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: MELVLKDTQDILNVSEKIFGFNFNKALIHQIIIAYFAGSRQGTSCQKNRGEVIGSNKKPWRQKGTGRARSGSVKSPIWRSGGITFAAKQQDYSKKVNKKMYRGALKSIFSELIRQNRLIIVEYFYIKAPKTKFLVQKLQNLLLDDVLIITDKLNENLFLAARNLYKVEVSDTKSVNPISLIVFDKVIITVNAIKQFEDMLV
SIO_010081: TREMTM_RS01420
subclass of: SO_0000673
so part of: TREMTM_RS01420
location: complement(279088..279693)
location: region:279088-279693:-1
so has part: feature:279088-279693:-1:exon

WP_083172590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279088-279693:-1:exon

TREMTM_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplC
locus tag: TREMTM_RS01425
old locus tag: TRABTM_A_02730
so part of: sequence
location: complement(279711..280337)
location: region:279711-280337:-1
so has part: feature:279711-280337:-1:exon
subclass of: SO_0000010

position:279711:-1
position: 279711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280337:-1
position: 280337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279711-280337:-1:exon

TREMTM_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplC
locus tag: TREMTM_RS01425
old locus tag: TRABTM_A_02730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MKGLIGRKVGMTRLFTEGISIPITVIEIKENSVIQIKNFKNDGYNAIQITSGIKNKKRINKSEAGHFAKSGVEVGCGLWEFKINNIEEMTVGQNISVEIFSTIKKVDITGISKGKGFAGTVKRWNFHTQDSTHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGQLGNKKVTIQNLDIIRIDIQRNLLLVKGAVPGAISNHLIIKPAIKA
SIO_010081: TREMTM_RS01425
subclass of: SO_0000673
so part of: TREMTM_RS01425
location: complement(279711..280337)
location: region:279711-280337:-1
so has part: feature:279711-280337:-1:exon

WP_083172592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279711-280337:-1:exon

TREMTM_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsJ
locus tag: TREMTM_RS01430
old locus tag: TRABTM_A_02740
so part of: sequence
location: complement(280365..280676)
location: region:280365-280676:-1
so has part: feature:280365-280676:-1:exon
subclass of: SO_0000010

position:280365:-1
position: 280365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280676:-1
position: 280676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280365-280676:-1:exon

TREMTM_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsJ
locus tag: TREMTM_RS01430
old locus tag: TRABTM_A_02740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MQNQRIRIRLKAFDYRLIDQSTVEIVETAKRTGAQVRGPIPLPTRKERFTILISPHVNKDARDQYEMRTHKRLIDIVEPTKKTVDALMRLDLAAGVDVHISLG
SIO_010081: TREMTM_RS01430
subclass of: SO_0000673
so part of: TREMTM_RS01430
location: complement(280365..280676)
location: region:280365-280676:-1
so has part: feature:280365-280676:-1:exon

WP_083172594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280365-280676:-1:exon

TREMTM_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tuf
locus tag: TREMTM_RS01435
old locus tag: TRABTM_A_02750
so part of: sequence
location: complement(280800..281984)
location: region:280800-281984:-1
so has part: feature:280800-281984:-1:exon
subclass of: SO_0000010

position:280800:-1
position: 280800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281984:-1
position: 281984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280800-281984:-1:exon

TREMTM_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tuf
locus tag: TREMTM_RS01435
old locus tag: TRABTM_A_02750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210669.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MSKEKFQRTKPHINVGTIGHVDHGKTTLTAAITTVLAKAYGGNARACEQIDNAPEEKARGITINASHVEYDTLNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIVVFMNKCDIVDDEELLELVEMEVRELLSQYDFPGEKTPIIRGSALKALEGNEIWTKKIIELAEALDKYIPEPKRIIDQPFLLPIEDVFSISGRGTVVTGRIERGIIKVGDEIEIVGIKNTVRTICTGVEMFRKLLDEGRAGDNVGILLRGTKRDEVERGQVLAKIGSIKPYTKFDSEVYILNKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGIEMVMPGDNIKMVVNLISPIAMDNGLRFAIREGGHTIGAGVVAKIIE
SIO_010081: TREMTM_RS01435
subclass of: SO_0000673
so part of: TREMTM_RS01435
location: complement(280800..281984)
location: region:280800-281984:-1
so has part: feature:280800-281984:-1:exon

WP_083172596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280800-281984:-1:exon

TREMTM_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01440
old locus tag: TRABTM_A_T0380
so part of: sequence
location: complement(282085..282157)
location: region:282085-282157:-1
so has part: feature:282085-282157:-1:exon
subclass of: SO_0000663

position:282085:-1
position: 282085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282157:-1
position: 282157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282085-282157:-1:exon

TREMTM_RS01440
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS01440
old locus tag: TRABTM_A_T0380
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(282122..282124),aa:Thr,seq:ggt)
SIO_010081: TREMTM_RS01440
subclass of: SO_0000673
so part of: TREMTM_RS01440
location: complement(282085..282157)
location: region:282085-282157:-1
so has part: feature:282085-282157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282085-282157:-1:exon

TREMTM_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01445
old locus tag: TRABTM_A_T0390
so part of: sequence
location: complement(282167..282241)
location: region:282167-282241:-1
so has part: feature:282167-282241:-1:exon
subclass of: SO_0000663

position:282167:-1
position: 282167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282241:-1
position: 282241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282167-282241:-1:exon

TREMTM_RS01445
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS01445
old locus tag: TRABTM_A_T0390
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(282206..282208),aa:Gly,seq:tcc)
SIO_010081: TREMTM_RS01445
subclass of: SO_0000673
so part of: TREMTM_RS01445
location: complement(282167..282241)
location: region:282167-282241:-1
so has part: feature:282167-282241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282167-282241:-1:exon

TREMTM_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01450
old locus tag: TRABTM_A_T0400
so part of: sequence
location: complement(282255..282336)
location: region:282255-282336:-1
so has part: feature:282255-282336:-1:exon
subclass of: SO_0000663

position:282255:-1
position: 282255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282336:-1
position: 282336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282255-282336:-1:exon

TREMTM_RS01450
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS01450
old locus tag: TRABTM_A_T0400
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(282300..282302),aa:Tyr,seq:gta)
SIO_010081: TREMTM_RS01450
subclass of: SO_0000673
so part of: TREMTM_RS01450
location: complement(282255..282336)
location: region:282255-282336:-1
so has part: feature:282255-282336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282255-282336:-1:exon

TREMTM_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
locus tag: TREMTM_RS01455
old locus tag: TRABTM_A_T0410
so part of: sequence
location: complement(282351..282423)
location: region:282351-282423:-1
so has part: feature:282351-282423:-1:exon
subclass of: SO_0000663

position:282351:-1
position: 282351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282423:-1
position: 282423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282351-282423:-1:exon

TREMTM_RS01455
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1835721
locus tag: TREMTM_RS01455
old locus tag: TRABTM_A_T0410
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(282388..282390),aa:Thr,seq:tgt)
SIO_010081: TREMTM_RS01455
subclass of: SO_0000673
so part of: TREMTM_RS01455
location: complement(282351..282423)
location: region:282351-282423:-1
so has part: feature:282351-282423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282351-282423:-1:exon

TREMTM_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpoC
locus tag: TREMTM_RS01460
old locus tag: TRABTM_A_02760
so part of: sequence
location: complement(282527..286729)
location: region:282527-286729:-1
so has part: feature:282527-286729:-1:exon
subclass of: SO_0000010

position:282527:-1
position: 282527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286729:-1
position: 286729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282527-286729:-1:exon

TREMTM_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpoC
locus tag: TREMTM_RS01460
old locus tag: TRABTM_A_02760
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409999.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MKDLFNFLKKQNKNEEFDAIKITLASPEMIRSWSFGEVKKAETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMSLRDIESVLYFESYIVVESGMTNLECRQILTEDQYLNALEEFGDEFKAKMGAESIYDILKNLDLKYECENLREELEHTNFETKRKKITKRIKILESFLESGNKPEWMILTVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALIDNGRRGRAITGSNKRSLKSMSDMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLHLHQCGLPKKMALELFKPFIYGKLEIRGFATTIKAAKKMVEREETIVWDILDEVIHEHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTSEAQMEARTLMMSTKNILSPANGEPIIVPSQDVVLGLYYMTRDRINAKGEGMVLTGPKEAEKIYLLGIVELHARVKVRITEYTKNNNSEWIENTSIINTTIGRAILWLIVPNGLPFSLVNQVLGKKSISKMLNTCYRLLGLKSTVIFADQIMYTGFYYAARSGSSVGIDDMVIPEKKIEIIDEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANERIAKAMMDNLSTDTVINNDGIEENQVSFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLIITEKDCGTFSGILMTPVIEGGEIKEPLREKVLGRVTVENILKPGTSDILIERNSLLNEQCCDILEKFLVDSIKVRSVVTCDTDFGVCANCYGRDLARGNLVNEGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGIISLINAKFVFNCNGKLVITSRNTELKLIDKFGRTKEIYKVPYGAVMDKVNLSEVKSGEIVANWDPHTMPIIAEVNGFVHFIDMIDGQTITRQTDELTGLFSLVVLDTSERTISGKDLRPTLQIVDINGNDVFLPGTEIPAQYFLPGKAIVHLVDGAKITCGDTLARLPQETSGIKDITGGLPRVADLFEARCPKEPAILAEISGIVTFGKETKGKRRLLISSIENNNSYEEMIPKCRHLNVFEGERVEQGDVISDGPESPHDILRLRGVHEVTRYIVNEVQEVYRLQGVKINDKHIEVIIRQMLRKVTITKSNNSEFLEGEQVEYSRIKIANRNLEKNGKEKISYIRNLLGITKASLATNSFISAASFQETTRVLTEAAVAGKYDELRGLKENVIVGRLIPAGTGYNFHKNSAIPKNILSKVPTITADKASANLAELLNKKND
SIO_010081: TREMTM_RS01460
subclass of: SO_0000673
so part of: TREMTM_RS01460
location: complement(282527..286729)
location: region:282527-286729:-1
so has part: feature:282527-286729:-1:exon

WP_083172598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282527-286729:-1:exon

TREMTM_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpoB
locus tag: TREMTM_RS01465
old locus tag: TRABTM_A_02770
so part of: sequence
location: complement(286820..290854)
location: region:286820-290854:-1
so has part: feature:286820-290854:-1:exon
subclass of: SO_0000010

position:286820:-1
position: 286820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290854:-1
position: 290854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286820-290854:-1:exon

TREMTM_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpoB
locus tag: TREMTM_RS01465
old locus tag: TRABTM_A_02770
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409998.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: MFFYSHTEKKRIRKDFGKRPQILDIPYLLSIQLDSFQKFIEQDIEGQYGLEAVFRSIFPIKSYNGKSELQYVTYRLGDPIFDIKECQMRGITFSSPLRVKLRLIIYEREISEITVKNIKEQEVYMGEIPLMTDNGTFIINGTERVVVSQLHRSPGVFFDSDKGKIHSSGKILYNARIIPYRGSWLDFEFDLKDNLFFRIDRRRKLPVTLLLRALNYSTNQILDIFFKKVIYEINNQNLIMNLIPEFLRGETALFDIKEKGILYVEKGRRVTSRHIDHLKKDNIEQINVPIEYIIGKIVAKDYFDEKTGENIIYANKALTIDIINKLIKAGHKIIETLFINNLDNGAYISETLLIDPTNDRLNALLEIYRMMRPGELPTNEAAENLFKNLFFSEERYDLSAVGRMKFNRSLLRKESEGPGILEKKDIVDVIKKLIDIRNGKGEIDDIDHLGNRRIRAVGEMAENQFRIGLLRVERAVKERLSLGDMDNLMPQDMINAKPISAAIKEFFSSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERASFEVRDVHPTHYGRICSIETPEGPNIGLINSLSVYAQTNEYGFLETPYRLVQNGVVTDEIHYLSAIEEGYFVIAQANTNLSKDGHFVDEFITCRNKGESSLFNSKQINYMDVSTQQIVSVGASLIPFLEHNDANRALMGANMQRQAIPNLITDKPLVGTGMERIVAVDSGVTIVAKRSGKVQYVDASRIVINVNSDETFSGEAGIDIYNLKKYIRSNQNTCINQKPCVSLGELINRGDVIADGPSTDLGELALGQNMRIAFMPWNGYNFEDSMLISEKVVQEDRFTTVHIQEMTCISRDTKLGSEEITADIPNVGESALSKLDESGIVYIGAEVSDGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPNGTSGVVIDVQIFTRDGVKKDKRALEIEEIQLQQIKKDLTEELHIFENGLFSRIRNLLILSGIESSKLDKLTRKNWLEIDIINKDIKNQFDQLIEQYQELKYEFQKKLEAKKNKIIQYDNLAPGILKVVKVYLAVKLQIQPGDKMAGRHGNKGVISKINPIEDMPYDENGVPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINYMLNQHNNIKKLRKFIQKAYNVGDNLRQKINIDSFSDEEILCLANNLKKGMPIATPVFDGAKEKEIKELLKLSGLPSSGQITLFDGRTGEKFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYSLQEMLTIKSDDVNGRTKMYKNIIDGNYMMEPSMPESFNVLLKEIRSLGINIELEKNK
SIO_010081: TREMTM_RS01465
subclass of: SO_0000673
so part of: TREMTM_RS01465
location: complement(286820..290854)
location: region:286820-290854:-1
so has part: feature:286820-290854:-1:exon

WP_083172600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286820-290854:-1:exon

TREMTM_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplL
locus tag: TREMTM_RS01470
old locus tag: TRABTM_A_02780
so part of: sequence
location: complement(291037..291417)
location: region:291037-291417:-1
so has part: feature:291037-291417:-1:exon
subclass of: SO_0000010

position:291037:-1
position: 291037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291417:-1
position: 291417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291037-291417:-1:exon

TREMTM_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplL
locus tag: TREMTM_RS01470
old locus tag: TRABTM_A_02780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004387079.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L7/L12
translation: MFITKEQIIDTIAKMSVLDVVELISMMEKKFSISANQTAIDVAITKEVPIEKTIEEQTEFKVFLNEIGTNKIAVIKAVRGATGLGLKESKDLVESAPAIIKTGLNKNDAENLKNLLEKVGATISIN
SIO_010081: TREMTM_RS01470
subclass of: SO_0000673
so part of: TREMTM_RS01470
location: complement(291037..291417)
location: region:291037-291417:-1
so has part: feature:291037-291417:-1:exon

WP_083172602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291037-291417:-1:exon

TREMTM_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplJ
locus tag: TREMTM_RS01475
old locus tag: TRABTM_A_02790
so part of: sequence
location: complement(291455..291958)
location: region:291455-291958:-1
so has part: feature:291455-291958:-1:exon
subclass of: SO_0000010

position:291455:-1
position: 291455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291958:-1
position: 291958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291455-291958:-1:exon

TREMTM_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplJ
locus tag: TREMTM_RS01475
old locus tag: TRABTM_A_02790
inference: COORDINATES: protein motif:HMM:NF000955.1
GO component: GO:0015934 - large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L10
translation: MVLNFKNKKNIINKFKQISMNAISAFIMDFSGITANQMTELRKLSRESNIQLYIVRNRLMQRAVKGTSLECLKDKFIGPNIIAFSKENVNTSARLLTSFSKKNTNLKIKMAVLEGNLIQDSQIESLVNMPNYKESVIFLVSTIKNISITKLFRTLIAVCNKKEKYNI
SIO_010081: TREMTM_RS01475
subclass of: SO_0000673
so part of: TREMTM_RS01475
location: complement(291455..291958)
location: region:291455-291958:-1
so has part: feature:291455-291958:-1:exon

WP_083172604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291455-291958:-1:exon

TREMTM_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplA
locus tag: TREMTM_RS01480
old locus tag: TRABTM_A_02800
so part of: sequence
location: complement(292029..292733)
location: region:292029-292733:-1
so has part: feature:292029-292733:-1:exon
subclass of: SO_0000010

position:292029:-1
position: 292029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292733:-1
position: 292733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292029-292733:-1:exon

TREMTM_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplA
locus tag: TREMTM_RS01480
old locus tag: TRABTM_A_02800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005192339.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L1
translation: MTKLTKRMRIIRDQINFSKQYDINSALFLLKKFTLVNFNESVDIAIQLNIDTHKSNHNICGTVVFPHGNGRNVRVAVFAQGINAQIAKTAGADIIGINNLVDNIKIGKFDFDIVIASPDLMHIVSKLGKFLGPRNLMPNPKLGTVTSNISEAVKNAKYGQIQYRTDKKGIIHTTIGKINFDSNKLEENLETLLLALKKDKPIPTKGIYIKKISISTTMGAGIVINKNCLSRFVI
SIO_010081: TREMTM_RS01480
subclass of: SO_0000673
so part of: TREMTM_RS01480
location: complement(292029..292733)
location: region:292029-292733:-1
so has part: feature:292029-292733:-1:exon

WP_083172606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292029-292733:-1:exon

TREMTM_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rplK
locus tag: TREMTM_RS01485
old locus tag: TRABTM_A_02810
so part of: sequence
location: complement(292737..293165)
location: region:292737-293165:-1
so has part: feature:292737-293165:-1:exon
subclass of: SO_0000010

position:292737:-1
position: 292737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293165:-1
position: 293165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292737-293165:-1:exon

TREMTM_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rplK
locus tag: TREMTM_RS01485
old locus tag: TRABTM_A_02810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11
translation: MVKKIKSYVKLQIAAGMANPSPPVGPSLGQHGINIIEFCKLFNTKTDSLEKGLPIPVVITVYSDRSFTFITKSTPTAILLKKTVSIKSGSSKPNKNKVGKITNAQIIEIAKIKAPDMTGSDISAMVRSIIGTAYSIGIEIES
SIO_010081: TREMTM_RS01485
subclass of: SO_0000673
so part of: TREMTM_RS01485
location: complement(292737..293165)
location: region:292737-293165:-1
so has part: feature:292737-293165:-1:exon

WP_083172608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292737-293165:-1:exon

TREMTM_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: nusG
locus tag: TREMTM_RS01490
old locus tag: TRABTM_A_02820
so part of: sequence
location: complement(293275..293820)
location: region:293275-293820:-1
so has part: feature:293275-293820:-1:exon
subclass of: SO_0000010

position:293275:-1
position: 293275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293820:-1
position: 293820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293275-293820:-1:exon

TREMTM_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: nusG
locus tag: TREMTM_RS01490
old locus tag: TRABTM_A_02820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010848552.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination protein NusG
translation: MSESFQKNWYVIQAFSGFEKRVARSIIEHIKLQNMENFFGTVLIPKEDIIEIRGNQRRKSERKFFPGYILVQMVMNNDSWHLVRNISHVMGFVGGTSDRPAPISNKEVDIIINRLKKIGDKPRPKIIFEPGELIRVIDGPFSDFNCTVEEVDYEKNRLKVSVSIFGRATSVELDFNQVEKN
SIO_010081: TREMTM_RS01490
subclass of: SO_0000673
so part of: TREMTM_RS01490
location: complement(293275..293820)
location: region:293275-293820:-1
so has part: feature:293275-293820:-1:exon

WP_083172610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293275-293820:-1:exon

TREMTM_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: secE
locus tag: TREMTM_RS01495
old locus tag: TRABTM_A_02830
so part of: sequence
location: complement(293833..294024)
location: region:293833-294024:-1
so has part: feature:293833-294024:-1:exon
subclass of: SO_0000010

position:293833:-1
position: 293833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294024:-1
position: 294024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293833-294024:-1:exon

TREMTM_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: secE
locus tag: TREMTM_RS01495
old locus tag: TRABTM_A_02830
inference: COORDINATES: protein motif:HMM:TIGR00964.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecE
translation: MLFKIKFIFYFIIELYAELRKIIWPSYQETLKNTLIVTLVTSLMSLILWVIDGIIVYIISFIT
SIO_010081: TREMTM_RS01495
subclass of: SO_0000673
so part of: TREMTM_RS01495
location: complement(293833..294024)
location: region:293833-294024:-1
so has part: feature:293833-294024:-1:exon

WP_083172658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293833-294024:-1:exon

TREMTM_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: fusA
locus tag: TREMTM_RS01500
old locus tag: TRABTM_A_02840
so part of: sequence
location: complement(294382..296484)
location: region:294382-296484:-1
so has part: feature:294382-296484:-1:exon
subclass of: SO_0000010

position:294382:-1
position: 294382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296484:-1
position: 296484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294382-296484:-1:exon

TREMTM_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: fusA
locus tag: TREMTM_RS01500
old locus tag: TRABTM_A_02840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704108.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MARITPITNYRNIGISAHIDAGKTTTTERILFYAGVNHKIGEVHNGEATMDWMIQEQERGITITSAATTCFWSGMDKQFDSHRINIIDTPGHVDFTIEVERSMRVLDGAVMIYCAVGGVQPQSETVWRQANKYNIPRIAFINKMDRIGADYLRVVDQLKTRLAVNPVPIQLAIGAEANFAGIIDLVKMKAIYWNEKDQGITFFYKEIPNNLIELSDKWHHYLIESAVEASEDLMDKYLNGKKLTEKEIKKGLRQRVLNNDIILVTCGSAFKNKGVQALLDAVIEYLPAPSDIAAINGGKDKDTYNKEHYSNDNEPFSALAFKVANDPFVGNLTFFRVYSGVINSGDIVLNSVKNKKERFGRIVQMHANKREDIKNVYAGDIAAAIGLKNVTTGDTLCDLYTPIILEKMEFPEPVISVSVEPKTKIDQEKMSLALYRLAQEDPSFRFLIDKESGQTIISGMGELHLEILVDRMYREFNIKANIGKPQVAYRETIKSSVEQEGKFIRQSGGRGQFGHVWLRIEPIKNNDKDYEFINEIVGGVVPKEFIPAIDKGIQEQLKTGILAGYPIVGVRVTVYDGSYHEVDSSEMAFKIASSIAFKEGFINAKPVILEPIMKVEIETPQKYIGDVIGDLNRRRSIIEGIEDNINIKTIKAQVPLSEMFGYATELRSKTQGRASYSMEFFKYNETPNNIAQNIIKHNNV
SIO_010081: TREMTM_RS01500
subclass of: SO_0000673
so part of: TREMTM_RS01500
location: complement(294382..296484)
location: region:294382-296484:-1
so has part: feature:294382-296484:-1:exon

WP_083172612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294382-296484:-1:exon

TREMTM_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsG
locus tag: TREMTM_RS01505
old locus tag: TRABTM_A_02850
so part of: sequence
location: complement(296688..297158)
location: region:296688-297158:-1
so has part: feature:296688-297158:-1:exon
subclass of: SO_0000010

position:296688:-1
position: 296688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297158:-1
position: 297158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296688-297158:-1:exon

TREMTM_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsG
locus tag: TREMTM_RS01505
old locus tag: TRABTM_A_02850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MPRRRFINQRKILPDLKFKSEILAKLINIIMIDGKKANAENIVYTALNFLTKITKKNQLEAFEIAINNVRPIVEIKSRRVGGSTYQVPVEVRQIRRNTLAIRWIVEAARKRNDKSMALRLAQELSDAIEKKGGAIKKRESIHRMADANKAFAHYHW
SIO_010081: TREMTM_RS01505
subclass of: SO_0000673
so part of: TREMTM_RS01505
location: complement(296688..297158)
location: region:296688-297158:-1
so has part: feature:296688-297158:-1:exon

WP_083172614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296688-297158:-1:exon

TREMTM_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: rpsL
locus tag: TREMTM_RS01510
old locus tag: TRABTM_A_02860
so part of: sequence
location: complement(297186..297560)
location: region:297186-297560:-1
so has part: feature:297186-297560:-1:exon
subclass of: SO_0000010

position:297186:-1
position: 297186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297560:-1
position: 297560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297186-297560:-1:exon

TREMTM_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: rpsL
locus tag: TREMTM_RS01510
old locus tag: TRABTM_A_02860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009638963.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MTTINQLVRKKRSRKITKSNVTALESCPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNIQEHSVILIRGGRVKDLPGVRYHIIRGSLDCSGVKNRKKGRSKYGVKNIKN
SIO_010081: TREMTM_RS01510
subclass of: SO_0000673
so part of: TREMTM_RS01510
location: complement(297186..297560)
location: region:297186-297560:-1
so has part: feature:297186-297560:-1:exon

WP_083172616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297186-297560:-1:exon

TREMTM_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 1835721
gene: tusB
locus tag: TREMTM_RS01515
old locus tag: TRABTM_A_02870
so part of: sequence
location: complement(297734..298042)
location: region:297734-298042:-1
so has part: feature:297734-298042:-1:exon
subclass of: SO_0000010

position:297734:-1
position: 297734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298042:-1
position: 298042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297734-298042:-1:exon

TREMTM_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1835721
gene: tusB
locus tag: TREMTM_RS01515
old locus tag: TRABTM_A_02870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975826.1
GO function: GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO process: GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusB
translation: MLYILNRSPYLSDFKSVLRIINCNEDCNDDFNDDLLLISDGVILGLNNSFFSKKIKNSMNIYALKNDIEARGLFSYYLSNIKLIDYIDFIKLTEKNLQQVTW
SIO_010081: TREMTM_RS01515
subclass of: SO_0000673
so part of: TREMTM_RS01515
location: complement(297734..298042)
location: region:297734-298042:-1
so has part: feature:297734-298042:-1:exon

WP_083172618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297734-298042:-1:exon