Gopherus evgoodei ecotype Sinaloan lineage chromosome 23, rGopEvg1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Gopherus evgoodei ecotype Sinaloan lineage chromosome 23, rGopEvg1_v1.p, whole genome shotgun sequence.
sequence version: NC_044344.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044344.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA559383
dblink: SAMN03496275
keyword: WGS
keyword: RefSeq
source: Gopherus evgoodei (Goodes thornscrub tortoise)
organism: Gopherus evgoodei
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Gopherus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM017318.1.\nAssembly name: rGopEvg1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/07/25. The original whole-genome shotgun project has the\naccession VHHN00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 31-JAN-2019\nAssembly Method :: FALCON v. 5.1.1; FALCON-Unzip v. 1.0.2;\n purge_haplotigs v. bitbucket 7.10.2018;\n scaff10x v. 2.1; Bionano Solve DLS v.\n 3.2.1; Salsa2 v. 2.2; Arrow v.\n 5.1.0.26412; longranger align v. 2.2.2;\n freebayes v. 1.2.0; gEVAL manual curation\n v. 2019-01-31; VGP standard assembly\n pipeline v. 1.5\nAssembly Name :: rGopEvg1_v1.p\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 58.0x\nSequencing Technology :: PacBio Sequel I; 10X Genomics linked\n reads; Arima Genomics Hi-C; Bionano\n Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Gopherus evgoodei Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 15774734
topology: linear
so has quality: SO_0000987
location: 1..15774734
location: region:1-15774734:1
RO_0002162: 1825980

NC_044344
type: RefSeq
SIO_000068: refseq

PRJNA559383
type: BioProject
SIO_000068: bioproject

SAMN03496275
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15774734:1
position: 15774734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15774734:1:source
so part of: sequence
organism: Gopherus evgoodei
mol type: genomic DNA
chromosome: 23
sex: male
tissue type: whole blood
ecotype: Sinaloan lineage
country: Mexico: Sonora
collection date: 2010-08-10
collected by: T. Edwards

1825980
type: Taxonomy
SIO_000068: taxonomy

LOC115639188
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115639188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2146..4270)
location: region:2146-4270:-1
so has part: feature:2146-4270:-1:exon
subclass of: SO_0000010

115639188
type: Gene
SIO_000068: ncbigene

position:2146:-1
position: 2146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4270:-1
position: 4270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2146-4270:-1:exon

LOC115639188
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115639188
product: zinc finger protein 436-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030541646.1
SIO_010081: LOC115639188
subclass of: SO_0000673
so part of: LOC115639188
location: complement(join(2146..3096,4194..4270))
location: region:2146-4270:-1
so has part: feature:4194-4270:-1:exon
so has part: feature:2146-3096:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4194-4270:-1:exon

position:4194:-1
position: 4194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2146-3096:-1:exon

position:3096:-1
position: 3096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115639188
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115639188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 436-like
translation: MPCLRVVELWGTPFQTAKPREGMVRETVEQTPQQEEEQLETRGALLQRCKGSVSRSCEQGKGSQGQHRPEKRQGNQPVQKVGISVHYRETHKGLKEATAWQRILTGERNNTGFESGKKFRRCSHHQRIHTGVRPYGCCECGKTFTERSTLIRHQRIHTGEKPHECCECGKTFAQRSHLICHQKMHTGEKPYGCCECGKTFTESSHLICHQRIHRGSAPMDAATVGKPSLSIQISLRIRGVTQGRNPINGMSVGKPSLGTQPL
SIO_010081: LOC115639188
subclass of: SO_0000673
so part of: LOC115639188
location: complement(join(2366..3096,4194..4251))
location: region:2366-4251:-1
so has part: feature:4194-4251:-1:exon
so has part: feature:2366-3096:-1:exon

XP_030397506.1
type: Protein
SIO_000068: ncbiprotein

position:2366:-1
position: 2366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4251:-1
position: 4251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4194-4251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2366-3096:-1:exon

LOC115639176
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115639176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17221..29221)
location: region:17221-29221:-1
so has part: feature:17221-29221:-1:exon
subclass of: SO_0000011

115639176
type: Gene
SIO_000068: ncbigene

position:17221:-1
position: 17221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29221:-1
position: 29221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17221-29221:-1:exon

LOC115639176
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115639176
product: uncharacterized LOC115639176, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997622.1
SIO_010081: LOC115639176
subclass of: SO_0000673
so part of: LOC115639176
location: complement(join(17221..17305,24044..24837,25137..25273,27692..28039,28342..29221))
location: region:17221-29221:-1
so has part: feature:28342-29221:-1:exon
so has part: feature:27692-28039:-1:exon
so has part: feature:25137-25273:-1:exon
so has part: feature:24044-24837:-1:exon
so has part: feature:17221-17305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28342-29221:-1:exon

position:28342:-1
position: 28342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27692-28039:-1:exon

position:27692:-1
position: 27692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28039:-1
position: 28039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25137-25273:-1:exon

position:25137:-1
position: 25137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25273:-1
position: 25273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24044-24837:-1:exon

position:24044:-1
position: 24044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24837:-1
position: 24837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17221-17305:-1:exon

position:17305:-1
position: 17305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115639176
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115639176
product: uncharacterized LOC115639176, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003997621.1
SIO_010081: LOC115639176
subclass of: SO_0000673
so part of: LOC115639176
location: complement(join(22962..23322,24044..24837,25137..25273,27692..28039,28342..29221))
location: region:22962-29221:-1
so has part: feature:28342-29221:-1:exon
so has part: feature:27692-28039:-1:exon
so has part: feature:25137-25273:-1:exon
so has part: feature:24044-24837:-1:exon
so has part: feature:22962-23322:-1:exon

position:22962:-1
position: 22962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28342-29221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27692-28039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25137-25273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24044-24837:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22962-23322:-1:exon

position:23322:-1
position: 23322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115639176
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115639176
product: uncharacterized LOC115639176, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003997620.1
SIO_010081: LOC115639176
subclass of: SO_0000673
so part of: LOC115639176
location: complement(join(23433..24837,25137..25273,27692..28039,28342..28468,28600..29221))
location: region:23433-29221:-1
so has part: feature:28600-29221:-1:exon
so has part: feature:28342-28468:-1:exon
so has part: feature:27692-28039:-1:exon
so has part: feature:25137-25273:-1:exon
so has part: feature:23433-24837:-1:exon

position:23433:-1
position: 23433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28600-29221:-1:exon

position:28600:-1
position: 28600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28342-28468:-1:exon

position:28468:-1
position: 28468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27692-28039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25137-25273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23433-24837:-1:exon

LOC115639176
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115639176
product: uncharacterized LOC115639176, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003997619.1
SIO_010081: LOC115639176
subclass of: SO_0000673
so part of: LOC115639176
location: complement(join(23437..24837,25137..25273,27692..28039,28342..29221))
location: region:23437-29221:-1
so has part: feature:28342-29221:-1:exon
so has part: feature:27692-28039:-1:exon
so has part: feature:25137-25273:-1:exon
so has part: feature:23437-24837:-1:exon

position:23437:-1
position: 23437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28342-29221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27692-28039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25137-25273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23437-24837:-1:exon

LOC115639117
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115639117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(71594..94974)
location: region:71594-94974:-1
so has part: feature:71594-94974:-1:exon

115639117
type: Gene
SIO_000068: ncbigene

position:71594:-1
position: 71594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94974:-1
position: 94974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71594-94974:-1:exon

LOC115639117
type: Exon
subclass of: SO_0000147
RO_0002162: 1825980
gene: LOC115639117
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115639117
subclass of: SO_0000673
so part of: LOC115639117
location: complement(71594..73354)
location: region:71594-73354:-1
so has part: feature:71594-73354:-1:exon

position:73354:-1
position: 73354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71594-73354:-1:exon

LOC115639117
type: Exon
subclass of: SO_0000147
RO_0002162: 1825980
gene: LOC115639117
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115639117
subclass of: SO_0000673
so part of: LOC115639117
location: complement(75305..75521)
location: region:75305-75521:-1
so has part: feature:75305-75521:-1:exon

position:75305:-1
position: 75305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75521:-1
position: 75521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75305-75521:-1:exon

LOC115639117
type: Exon
subclass of: SO_0000147
RO_0002162: 1825980
gene: LOC115639117
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115639117
subclass of: SO_0000673
so part of: LOC115639117
location: complement(94324..94974)
location: region:94324-94974:-1
so has part: feature:94324-94974:-1:exon

position:94324:-1
position: 94324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94324-94974:-1:exon

MPP3
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: MPP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 102632..149216
location: region:102632-149216:1
so has part: feature:102632-149216:1:exon
subclass of: SO_0000010

115639116
type: Gene
SIO_000068: ncbigene

position:102632:1
position: 102632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149216:1
position: 149216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102632-149216:1:exon

MPP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: MPP3
product: membrane palmitoylated protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030541504.1
SIO_010081: MPP3
subclass of: SO_0000673
so part of: MPP3
location: join(102632..102884,111699..111806,116596..116714,118571..118648,119926..120006,122421..122558,123427..123508,125179..125264,126569..126643,128096..128292,132883..132947,134639..134659,136329..136370,136894..137049,137635..137715,141758..141851,143297..143405,147185..147304,149033..149216)
location: region:102632-149216:1
so has part: feature:102632-102884:1:exon
so has part: feature:111699-111806:1:exon
so has part: feature:116596-116714:1:exon
so has part: feature:118571-118648:1:exon
so has part: feature:119926-120006:1:exon
so has part: feature:122421-122558:1:exon
so has part: feature:123427-123508:1:exon
so has part: feature:125179-125264:1:exon
so has part: feature:126569-126643:1:exon
so has part: feature:128096-128292:1:exon
so has part: feature:132883-132947:1:exon
so has part: feature:134639-134659:1:exon
so has part: feature:136329-136370:1:exon
so has part: feature:136894-137049:1:exon
so has part: feature:137635-137715:1:exon
so has part: feature:141758-141851:1:exon
so has part: feature:143297-143405:1:exon
so has part: feature:147185-147304:1:exon
so has part: feature:149033-149216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102632-102884:1:exon

position:102884:1
position: 102884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111699-111806:1:exon

position:111699:1
position: 111699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111806:1
position: 111806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116596-116714:1:exon

position:116596:1
position: 116596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116714:1
position: 116714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118571-118648:1:exon

position:118571:1
position: 118571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118648:1
position: 118648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:119926-120006:1:exon

position:119926:1
position: 119926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120006:1
position: 120006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:122421-122558:1:exon

position:122421:1
position: 122421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122558:1
position: 122558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:123427-123508:1:exon

position:123427:1
position: 123427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123508:1
position: 123508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:125179-125264:1:exon

position:125179:1
position: 125179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125264:1
position: 125264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:126569-126643:1:exon

position:126569:1
position: 126569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126643:1
position: 126643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:128096-128292:1:exon

position:128096:1
position: 128096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128292:1
position: 128292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:132883-132947:1:exon

position:132883:1
position: 132883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132947:1
position: 132947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:134639-134659:1:exon

position:134639:1
position: 134639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134659:1
position: 134659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:136329-136370:1:exon

position:136329:1
position: 136329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136370:1
position: 136370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:136894-137049:1:exon

position:136894:1
position: 136894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137049:1
position: 137049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:137635-137715:1:exon

position:137635:1
position: 137635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137715:1
position: 137715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:141758-141851:1:exon

position:141758:1
position: 141758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141851:1
position: 141851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:143297-143405:1:exon

position:143297:1
position: 143297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143405:1
position: 143405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:147185-147304:1:exon

position:147185:1
position: 147185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147304:1
position: 147304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:149033-149216:1:exon

position:149033:1
position: 149033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MPP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: MPP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 3
translation: MPVLSEDSGLHETLALLTSQLRPDSNHKEEMGFLRDVFSEKSLSYLMKIHEKLRHYERQSPTPVLHSAAALAEDVIEELQTMPVNNEEKELLQLLSTPHLRAMLVVHDTVAQKNFDPVLPPLPDNIDDDFDEESVKIVRLVKNKEPLGATIRRDENTGAVIVARIMRGGAADRSGLVHVGDELKEVNGIAVLHKRPEEISQILAQSQGSITLKIIPAIREEDCLKDSKVFMRALFCYNPKEDKAIPCQEAGLPFKRRHILEVVSQDDPTWWQAKRVGDTNLRAGLIPSKQFQERRLNYRRTIGTLQNSKTVKKPLYDQSSEKEDCDCEGYFNGQYIAGLRRSFRLSRKEKHNNQNQAKQADISEFLTYEEVTEYQHQLGEKQRLVVLIGSLGARLNELKQKVVSENPQEYGVAVPHTTRSKKSHEKEGVEYNFVSKQSFEIDVQHNKFVEHGEYKENLYGTSLEAIQSVMAKNKVCLVDVVPEAVKHLRTPEFKPYVIFVKPLVPEKKKNAPSPTSEEISAPLDEEQQDIINSAAFIEEQYGHLIDTVLLKEDLQSAYNQLKTLLEKLKEDSFWVPVSWVRS
SIO_010081: MPP3
subclass of: SO_0000673
so part of: MPP3
location: join(111782..111806,116596..116714,118571..118648,119926..120006,122421..122558,123427..123508,125179..125264,126569..126643,128096..128292,132883..132947,134639..134659,136329..136370,136894..137049,137635..137715,141758..141851,143297..143405,147185..147304,149033..149212)
location: region:111782-149212:1
so has part: feature:111782-111806:1:exon
so has part: feature:116596-116714:1:exon
so has part: feature:118571-118648:1:exon
so has part: feature:119926-120006:1:exon
so has part: feature:122421-122558:1:exon
so has part: feature:123427-123508:1:exon
so has part: feature:125179-125264:1:exon
so has part: feature:126569-126643:1:exon
so has part: feature:128096-128292:1:exon
so has part: feature:132883-132947:1:exon
so has part: feature:134639-134659:1:exon
so has part: feature:136329-136370:1:exon
so has part: feature:136894-137049:1:exon
so has part: feature:137635-137715:1:exon
so has part: feature:141758-141851:1:exon
so has part: feature:143297-143405:1:exon
so has part: feature:147185-147304:1:exon
so has part: feature:149033-149212:1:exon

XP_030397364.1
type: Protein
SIO_000068: ncbiprotein

position:111782:1
position: 111782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149212:1
position: 149212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111782-111806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116596-116714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118571-118648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119926-120006:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122421-122558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:123427-123508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:125179-125264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:126569-126643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128096-128292:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:132883-132947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134639-134659:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:136329-136370:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:136894-137049:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137635-137715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:141758-141851:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:143297-143405:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:147185-147304:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:149033-149212:1:exon

LOC115639118
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115639118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(153871..182002)
location: region:153871-182002:-1
so has part: feature:153871-182002:-1:exon
subclass of: SO_0000010

115639118
type: Gene
SIO_000068: ncbigene

position:153871:-1
position: 153871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182002:-1
position: 182002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153871-182002:-1:exon

LOC115639118
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115639118
product: ras-related protein Rab-18-B-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030541508.1
SIO_010081: LOC115639118
subclass of: SO_0000673
so part of: LOC115639118
location: complement(join(153871..153954,173206..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..182002))
location: region:153871-182002:-1
so has part: feature:181753-182002:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:173206-173419:-1:exon
so has part: feature:153871-153954:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181753-182002:-1:exon

position:181753:-1
position: 181753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

position:181604:-1
position: 181604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181659:-1
position: 181659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

position:181100:-1
position: 181100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181161:-1
position: 181161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

position:176798:-1
position: 176798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176870:-1
position: 176870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

position:175675:-1
position: 175675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175793:-1
position: 175793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

position:174488:-1
position: 174488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174554:-1
position: 174554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:173206-173419:-1:exon

position:173206:-1
position: 173206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173419:-1
position: 173419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:153871-153954:-1:exon

position:153954:-1
position: 153954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CFAP97D1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: CFAP97D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(153885..167839)
location: region:153885-167839:-1
so has part: feature:153885-167839:-1:exon
subclass of: SO_0000010

115639120
type: Gene
SIO_000068: ncbigene

position:153885:-1
position: 153885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167839:-1
position: 167839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153885-167839:-1:exon

CFAP97D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CFAP97D1
product: CFAP97 domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030541514.1
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(153885..153954,155034..155093,160835..160953,161419..161489,165829..167839))
location: region:153885-167839:-1
so has part: feature:165829-167839:-1:exon
so has part: feature:161419-161489:-1:exon
so has part: feature:160835-160953:-1:exon
so has part: feature:155034-155093:-1:exon
so has part: feature:153885-153954:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165829-167839:-1:exon

position:165829:-1
position: 165829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161419-161489:-1:exon

position:161419:-1
position: 161419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161489:-1
position: 161489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160835-160953:-1:exon

position:160835:-1
position: 160835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160953:-1
position: 160953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:155034-155093:-1:exon

position:155034:-1
position: 155034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155093:-1
position: 155093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:153885-153954:-1:exon

CFAP97D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CFAP97D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein CFAP97D1 isoform X2
translation: MSSLEYLAYPVIVANHRQSTTMKKELDIGDYLSHKNKLELARPRVDNKPPRAQTHHHFKMSKIQEDQKKIGRIERENKQLAERLATIQRGTGMVDCWNEYFQRRIHGTISGIPRGISLLLGIARRLHQAWIIQQTLSTS
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(153906..153954,155034..155093,160835..160953,161419..161489,165829..165949))
location: region:153906-165949:-1
so has part: feature:165829-165949:-1:exon
so has part: feature:161419-161489:-1:exon
so has part: feature:160835-160953:-1:exon
so has part: feature:155034-155093:-1:exon
so has part: feature:153906-153954:-1:exon

XP_030397374.1
type: Protein
SIO_000068: ncbiprotein

position:153906:-1
position: 153906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165949:-1
position: 165949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165829-165949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161419-161489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160835-160953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155034-155093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153906-153954:-1:exon

LOC115639118
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1825980
gene: LOC115639118
product: ras-related protein Rab-18-B-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003997608.1
SIO_010081: LOC115639118
so part of: LOC115639118
location: complement(join(153929..153954,155034..155093,161419..161489,167846..167965,173206..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..182002))
location: region:153929-182002:-1
so has part: feature:181753-182002:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:173206-173419:-1:exon
so has part: feature:167846-167965:-1:exon
so has part: feature:161419-161489:-1:exon
so has part: feature:155034-155093:-1:exon
so has part: feature:153929-153954:-1:exon

position:153929:-1
position: 153929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181753-182002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173206-173419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167846-167965:-1:exon

position:167846:-1
position: 167846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167965:-1
position: 167965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:161419-161489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:155034-155093:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153929-153954:-1:exon

LOC115639118
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1825980
gene: LOC115639118
product: ras-related protein Rab-18-B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997607.1
SIO_010081: LOC115639118
so part of: LOC115639118
location: complement(join(153937..153954,155034..155093,161419..161489,173206..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..182002))
location: region:153937-182002:-1
so has part: feature:181753-182002:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:173206-173419:-1:exon
so has part: feature:161419-161489:-1:exon
so has part: feature:155034-155093:-1:exon
so has part: feature:153937-153954:-1:exon

position:153937:-1
position: 153937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181753-182002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173206-173419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:161419-161489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155034-155093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153937-153954:-1:exon

LOC115639118
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115639118
product: ras-related protein Rab-18-B-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030541510.1
SIO_010081: LOC115639118
subclass of: SO_0000673
so part of: LOC115639118
location: complement(join(153962..155093,173206..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..182002))
location: region:153962-182002:-1
so has part: feature:181753-182002:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:173206-173419:-1:exon
so has part: feature:153962-155093:-1:exon

position:153962:-1
position: 153962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181753-182002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173206-173419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153962-155093:-1:exon

CFAP97D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CFAP97D1
product: CFAP97 domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030541512.1
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(158576..158958,160835..160953,161419..161489,165829..167839))
location: region:158576-167839:-1
so has part: feature:165829-167839:-1:exon
so has part: feature:161419-161489:-1:exon
so has part: feature:160835-160953:-1:exon
so has part: feature:158576-158958:-1:exon

position:158576:-1
position: 158576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165829-167839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161419-161489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160835-160953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158576-158958:-1:exon

position:158958:-1
position: 158958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CFAP97D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CFAP97D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein CFAP97D1 isoform X1
translation: MSSLEYLAYPVIVANHRQSTTMKKELDIGDYLSHKNKLELARPRVDNKPPRAQTHHHFKMSKIQEDQKKIGRIERENKQLAERLATIQRGTGMVDCWNEYFQRSSNREKQNREIVRITVENQGILKRLGDPKPTYDRRKSEIDWQACIIILFLETLFATIVRLN
SIO_010081: CFAP97D1
subclass of: SO_0000673
so part of: CFAP97D1
location: complement(join(158775..158958,160835..160953,161419..161489,165829..165949))
location: region:158775-165949:-1
so has part: feature:165829-165949:-1:exon
so has part: feature:161419-161489:-1:exon
so has part: feature:160835-160953:-1:exon
so has part: feature:158775-158958:-1:exon

XP_030397372.1
type: Protein
SIO_000068: ncbiprotein

position:158775:-1
position: 158775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165829-165949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161419-161489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160835-160953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158775-158958:-1:exon

LOC115639118
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115639118
product: ras-related protein Rab-18-B-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030541507.1
SIO_010081: LOC115639118
subclass of: SO_0000673
so part of: LOC115639118
location: complement(join(167976..168664,173206..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..182002))
location: region:167976-182002:-1
so has part: feature:181753-182002:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:173206-173419:-1:exon
so has part: feature:167976-168664:-1:exon

position:167976:-1
position: 167976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181753-182002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173206-173419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167976-168664:-1:exon

position:168664:-1
position: 168664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115639118
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115639118
product: ras-related protein Rab-18-B-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030541509.1
SIO_010081: LOC115639118
subclass of: SO_0000673
so part of: LOC115639118
location: complement(join(169389..172789,173206..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..182002))
location: region:169389-182002:-1
so has part: feature:181753-182002:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:173206-173419:-1:exon
so has part: feature:169389-172789:-1:exon

position:169389:-1
position: 169389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181753-182002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173206-173419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169389-172789:-1:exon

position:172789:-1
position: 172789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115639118
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115639118
product: ras-related protein Rab-18-B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030541506.1
SIO_010081: LOC115639118
subclass of: SO_0000673
so part of: LOC115639118
location: complement(join(169521..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..182002))
location: region:169521-182002:-1
so has part: feature:181753-182002:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:169521-173419:-1:exon

position:169521:-1
position: 169521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181753-182002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169521-173419:-1:exon

LOC115639118
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115639118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-18-B-like
translation: MERCVSKAAAGWRAGGPACMALSGPVTTGPRDGTLGRSWGAGPLSLPVRGAEAAAQGPAMATLKLVVLGDSAVGKSSLLLRFTDDTFEPYLNPTIGVDFKVKKMLVDGNAVQLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRKDTFTKLMTWLKELETYATQSNIVKMLVGNKIDKPDREINKKEGLQFARKHSMLFIETSAKTRDGVQCAFEEVVIKILQTPELWDKDKQKFGVQLETPPPTEEEFCGGYCILT
SIO_010081: LOC115639118
subclass of: SO_0000673
so part of: LOC115639118
location: complement(join(173247..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..181982))
location: region:173247-181982:-1
so has part: feature:181753-181982:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:173247-173419:-1:exon

XP_030397366.1
type: Protein
SIO_000068: ncbiprotein

position:173247:-1
position: 173247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181982:-1
position: 181982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181753-181982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173247-173419:-1:exon

LOC115639118
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115639118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-18-B-like
translation: MERCVSKAAAGWRAGGPACMALSGPVTTGPRDGTLGRSWGAGPLSLPVRGAEAAAQGPAMATLKLVVLGDSAVGKSSLLLRFTDDTFEPYLNPTIGVDFKVKKMLVDGNAVQLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRKDTFTKLMTWLKELETYATQSNIVKMLVGNKIDKPDREINKKEGLQFARKHSMLFIETSAKTRDGVQCAFEEVVIKILQTPELWDKDKQKFGVQLETPPPTEEEFCGGYCILT
SIO_010081: LOC115639118
subclass of: SO_0000673
so part of: LOC115639118
location: complement(join(173247..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..181982))
location: region:173247-181982:-1
so has part: feature:181753-181982:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:173247-173419:-1:exon

XP_030397367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181753-181982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173247-173419:-1:exon

LOC115639118
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115639118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-18-B-like
translation: MERCVSKAAAGWRAGGPACMALSGPVTTGPRDGTLGRSWGAGPLSLPVRGAEAAAQGPAMATLKLVVLGDSAVGKSSLLLRFTDDTFEPYLNPTIGVDFKVKKMLVDGNAVQLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRKDTFTKLMTWLKELETYATQSNIVKMLVGNKIDKPDREINKKEGLQFARKHSMLFIETSAKTRDGVQCAFEEVVIKILQTPELWDKDKQKFGVQLETPPPTEEEFCGGYCILT
SIO_010081: LOC115639118
subclass of: SO_0000673
so part of: LOC115639118
location: complement(join(173247..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..181982))
location: region:173247-181982:-1
so has part: feature:181753-181982:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:173247-173419:-1:exon

XP_030397368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181753-181982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173247-173419:-1:exon

LOC115639118
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115639118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-18-B-like
translation: MERCVSKAAAGWRAGGPACMALSGPVTTGPRDGTLGRSWGAGPLSLPVRGAEAAAQGPAMATLKLVVLGDSAVGKSSLLLRFTDDTFEPYLNPTIGVDFKVKKMLVDGNAVQLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRKDTFTKLMTWLKELETYATQSNIVKMLVGNKIDKPDREINKKEGLQFARKHSMLFIETSAKTRDGVQCAFEEVVIKILQTPELWDKDKQKFGVQLETPPPTEEEFCGGYCILT
SIO_010081: LOC115639118
subclass of: SO_0000673
so part of: LOC115639118
location: complement(join(173247..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..181982))
location: region:173247-181982:-1
so has part: feature:181753-181982:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:173247-173419:-1:exon

XP_030397369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181753-181982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173247-173419:-1:exon

LOC115639118
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115639118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-18-B-like
translation: MERCVSKAAAGWRAGGPACMALSGPVTTGPRDGTLGRSWGAGPLSLPVRGAEAAAQGPAMATLKLVVLGDSAVGKSSLLLRFTDDTFEPYLNPTIGVDFKVKKMLVDGNAVQLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRKDTFTKLMTWLKELETYATQSNIVKMLVGNKIDKPDREINKKEGLQFARKHSMLFIETSAKTRDGVQCAFEEVVIKILQTPELWDKDKQKFGVQLETPPPTEEEFCGGYCILT
SIO_010081: LOC115639118
subclass of: SO_0000673
so part of: LOC115639118
location: complement(join(173247..173419,174488..174554,175675..175793,176798..176870,181100..181161,181604..181659,181753..181982))
location: region:173247-181982:-1
so has part: feature:181753-181982:-1:exon
so has part: feature:181604-181659:-1:exon
so has part: feature:181100-181161:-1:exon
so has part: feature:176798-176870:-1:exon
so has part: feature:175675-175793:-1:exon
so has part: feature:174488-174554:-1:exon
so has part: feature:173247-173419:-1:exon

XP_030397370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181753-181982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181604-181659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181100-181161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176798-176870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175675-175793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174488-174554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173247-173419:-1:exon

DUSP3
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: DUSP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 182270..202590
location: region:182270-202590:1
so has part: feature:182270-202590:1:exon
subclass of: SO_0000010

115639119
type: Gene
SIO_000068: ncbigene

position:182270:1
position: 182270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202590:1
position: 202590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182270-202590:1:exon

DUSP3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1825980
gene: DUSP3
product: dual specificity phosphatase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_003997609.1
SIO_010081: DUSP3
so part of: DUSP3
location: join(182270..182400,191958..192184,197060..200494,200616..202590)
location: region:182270-202590:1
so has part: feature:182270-182400:1:exon
so has part: feature:191958-192184:1:exon
so has part: feature:197060-200494:1:exon
so has part: feature:200616-202590:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182270-182400:1:exon

position:182400:1
position: 182400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191958-192184:1:exon

position:191958:1
position: 191958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192184:1
position: 192184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197060-200494:1:exon

position:197060:1
position: 197060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200494:1
position: 200494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:200616-202590:1:exon

position:200616:1
position: 200616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUSP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: DUSP3
product: dual specificity phosphatase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030541511.1
SIO_010081: DUSP3
subclass of: SO_0000673
so part of: DUSP3
location: join(182270..182400,191958..192184,197060..202589)
location: region:182270-202589:1
so has part: feature:182270-182400:1:exon
so has part: feature:191958-192184:1:exon
so has part: feature:197060-202589:1:exon

position:202589:1
position: 202589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182270-182400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191958-192184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197060-202589:1:exon

DUSP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: DUSP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 3
translation: MSDYQISVEELNDLLANGSGCYSLPSAHSNEVAPRIHVGNAFIAKNIMRLQRLGITHILNAAEGKSFMHVNTNAEFYEGTGITYHGIKANDTQEFNLSCYFEEAADFIDSALSQKDGRVFVHCREGYSRSPTLVIAYLMLRQNMDVKSAVSAVRQKREIGPNDGFLKQLCQLNERLVKEGKLKP
SIO_010081: DUSP3
subclass of: SO_0000673
so part of: DUSP3
location: join(182279..182400,191958..192184,197060..197265)
location: region:182279-197265:1
so has part: feature:182279-182400:1:exon
so has part: feature:191958-192184:1:exon
so has part: feature:197060-197265:1:exon

XP_030397371.1
type: Protein
SIO_000068: ncbiprotein

position:182279:1
position: 182279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197265:1
position: 197265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182279-182400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191958-192184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197060-197265:1:exon

SOST
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: SOST
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 213824..219079
location: region:213824-219079:1
so has part: feature:213824-219079:1:exon
subclass of: SO_0000010

115639144
type: Gene
SIO_000068: ncbigene

position:213824:1
position: 213824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219079:1
position: 219079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213824-219079:1:exon

SOST
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: SOST
product: sclerostin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030541558.1
SIO_010081: SOST
subclass of: SO_0000673
so part of: SOST
location: join(213824..214046,218131..219079)
location: region:213824-219079:1
so has part: feature:213824-214046:1:exon
so has part: feature:218131-219079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213824-214046:1:exon

position:214046:1
position: 214046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218131-219079:1:exon

position:218131:1
position: 218131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SOST
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: SOST
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sclerostin
translation: MQISWTVCSICVLIQIAVHSVEAWQVFKNDATEIIPEIPENTETPVEQTNSNNNTMNQAKHGGRQPQPSLEPNDASDFSCRELRYTRYVIDGPCRSFKPIKELVCSGQCFPSHLLPNSIGRGKWWRQNALDYRCIPAHARTQRIQLACPQEETRTYKIRAVTACKCKRYTRYHNQSELKDFGKETIRPQKNKKPRLSRARGSKSNQPELENAY
SIO_010081: SOST
subclass of: SO_0000673
so part of: SOST
location: join(213827..214046,218131..218552)
location: region:213827-218552:1
so has part: feature:213827-214046:1:exon
so has part: feature:218131-218552:1:exon

XP_030397418.1
type: Protein
SIO_000068: ncbiprotein

position:213827:1
position: 213827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218552:1
position: 218552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213827-214046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218131-218552:1:exon

MEOX1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: MEOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 284759..303371
location: region:284759-303371:1
so has part: feature:284759-303371:1:exon
subclass of: SO_0000010

115639100
type: Gene
SIO_000068: ncbigene

position:284759:1
position: 284759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303371:1
position: 303371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284759-303371:1:exon

MEOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: MEOX1
product: mesenchyme homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030541464.1
SIO_010081: MEOX1
subclass of: SO_0000673
so part of: MEOX1
location: join(284759..285480,300110..300282,302267..303371)
location: region:284759-303371:1
so has part: feature:284759-285480:1:exon
so has part: feature:300110-300282:1:exon
so has part: feature:302267-303371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284759-285480:1:exon

position:285480:1
position: 285480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300110-300282:1:exon

position:300110:1
position: 300110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300282:1
position: 300282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:302267-303371:1:exon

position:302267:1
position: 302267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: MEOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein MOX-1
translation: MDPSVSSCMRSPRPTTPLWGCLRNAHSELSIAAGAHHYPQAPFSFHQKPDFAAYSDFSASCLATAPHSFPREERMFAEQHPSFQHSDWHFAASEARRRLNPGLALGSGELESSSPNLVAAAGGMNEDYGVPGNTTNETEKKSSKRKKETSENQDSSRKSEASSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQPVSPHEHDTEDMDSAASPSSE
SIO_010081: MEOX1
subclass of: SO_0000673
so part of: MEOX1
location: join(285030..285480,300110..300282,302267..302389)
location: region:285030-302389:1
so has part: feature:285030-285480:1:exon
so has part: feature:300110-300282:1:exon
so has part: feature:302267-302389:1:exon

XP_030397324.1
type: Protein
SIO_000068: ncbiprotein

position:285030:1
position: 285030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302389:1
position: 302389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285030-285480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300110-300282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302267-302389:1:exon

ETV4
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 361135..407076
location: region:361135-407076:1
so has part: feature:361135-407076:1:exon
subclass of: SO_0000010

115639198
type: Gene
SIO_000068: ncbigene

position:361135:1
position: 361135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407076:1
position: 407076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361135-407076:1:exon

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030541665.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(361135..361221,361484..361531,380931..380984,388766..388892,390492..390650,391075..391325,399165..399239,399352..399420,400948..401120,402490..402591,403541..407076)
location: region:361135-407076:1
so has part: feature:361135-361221:1:exon
so has part: feature:361484-361531:1:exon
so has part: feature:380931-380984:1:exon
so has part: feature:388766-388892:1:exon
so has part: feature:390492-390650:1:exon
so has part: feature:391075-391325:1:exon
so has part: feature:399165-399239:1:exon
so has part: feature:399352-399420:1:exon
so has part: feature:400948-401120:1:exon
so has part: feature:402490-402591:1:exon
so has part: feature:403541-407076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361135-361221:1:exon

position:361221:1
position: 361221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361484-361531:1:exon

position:361484:1
position: 361484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361531:1
position: 361531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:380931-380984:1:exon

position:380931:1
position: 380931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380984:1
position: 380984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:388766-388892:1:exon

position:388766:1
position: 388766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388892:1
position: 388892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:390492-390650:1:exon

position:390492:1
position: 390492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390650:1
position: 390650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:391075-391325:1:exon

position:391075:1
position: 391075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391325:1
position: 391325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:399165-399239:1:exon

position:399165:1
position: 399165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399239:1
position: 399239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:399352-399420:1:exon

position:399352:1
position: 399352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399420:1
position: 399420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:400948-401120:1:exon

position:400948:1
position: 400948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401120:1
position: 401120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:402490-402591:1:exon

position:402490:1
position: 402490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402591:1
position: 402591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:403541-407076:1:exon

position:403541:1
position: 403541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030541666.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(361135..361221,361484..361531,380931..380984,388766..388892,390492..390650,391075..391325,399165..399239,399352..399420,400951..401120,402490..402591,403541..407076)
location: region:361135-407076:1
so has part: feature:361135-361221:1:exon
so has part: feature:361484-361531:1:exon
so has part: feature:380931-380984:1:exon
so has part: feature:388766-388892:1:exon
so has part: feature:390492-390650:1:exon
so has part: feature:391075-391325:1:exon
so has part: feature:399165-399239:1:exon
so has part: feature:399352-399420:1:exon
so has part: feature:400951-401120:1:exon
so has part: feature:402490-402591:1:exon
so has part: feature:403541-407076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361135-361221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361484-361531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380931-380984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388766-388892:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390492-390650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391075-391325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399165-399239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399352-399420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400951-401120:1:exon

position:400951:1
position: 400951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:402490-402591:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:403541-407076:1:exon

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030541667.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(361135..361221,361484..361531,380931..380984,388769..388892,390492..390650,391075..391325,399165..399239,399352..399420,400948..401120,402490..402591,403541..407076)
location: region:361135-407076:1
so has part: feature:361135-361221:1:exon
so has part: feature:361484-361531:1:exon
so has part: feature:380931-380984:1:exon
so has part: feature:388769-388892:1:exon
so has part: feature:390492-390650:1:exon
so has part: feature:391075-391325:1:exon
so has part: feature:399165-399239:1:exon
so has part: feature:399352-399420:1:exon
so has part: feature:400948-401120:1:exon
so has part: feature:402490-402591:1:exon
so has part: feature:403541-407076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361135-361221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361484-361531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380931-380984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388769-388892:1:exon

position:388769:1
position: 388769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:390492-390650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391075-391325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399165-399239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399352-399420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400948-401120:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:402490-402591:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:403541-407076:1:exon

ETV4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: ETV4
product: ETS variant transcription factor 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030541668.1
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(361135..361221,361484..361531,380931..380984,388769..388892,390492..390650,391075..391325,399165..399239,399352..399420,400951..401120,402490..402591,403541..407076)
location: region:361135-407076:1
so has part: feature:361135-361221:1:exon
so has part: feature:361484-361531:1:exon
so has part: feature:380931-380984:1:exon
so has part: feature:388769-388892:1:exon
so has part: feature:390492-390650:1:exon
so has part: feature:391075-391325:1:exon
so has part: feature:399165-399239:1:exon
so has part: feature:399352-399420:1:exon
so has part: feature:400951-401120:1:exon
so has part: feature:402490-402591:1:exon
so has part: feature:403541-407076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361135-361221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361484-361531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380931-380984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388769-388892:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390492-390650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391075-391325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399165-399239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399352-399420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400951-401120:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:402490-402591:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:403541-407076:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X1
translation: MGAKRPMDPGLAPLQDSEELFQDLSQFQETWLTEAQVPDSDEQFVPDFHSENLAFHSPPAKVKKEPQSPCSDPALSCSHKQPFQYRNGEQCLYASAYDQTRQAGLKSPNPGTPIQSPLQHFPRQDRSFLSPQGPSQPTSSRGYLMEHSSVFQPPTEMCRSFPSSRGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQANQLGNSSDHQYPAGVVIKQEQTDYAYDSDVPGCPSMYMNAEGYQSHSNTEGTLGYGYNKQMRPFADDVCVVPEKFEAGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQPYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(361167..361221,361484..361531,380931..380984,388766..388892,390492..390650,391075..391325,399165..399239,399352..399420,400948..401120,402490..402591,403541..403762)
location: region:361167-403762:1
so has part: feature:361167-361221:1:exon
so has part: feature:361484-361531:1:exon
so has part: feature:380931-380984:1:exon
so has part: feature:388766-388892:1:exon
so has part: feature:390492-390650:1:exon
so has part: feature:391075-391325:1:exon
so has part: feature:399165-399239:1:exon
so has part: feature:399352-399420:1:exon
so has part: feature:400948-401120:1:exon
so has part: feature:402490-402591:1:exon
so has part: feature:403541-403762:1:exon

XP_030397525.1
type: Protein
SIO_000068: ncbiprotein

position:361167:1
position: 361167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403762:1
position: 403762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361167-361221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361484-361531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380931-380984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388766-388892:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390492-390650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391075-391325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399165-399239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399352-399420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400948-401120:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:402490-402591:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:403541-403762:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X2
translation: MGAKRPMDPGLAPLQDSEELFQDLSQFQETWLTEAQVPDSDEQFVPDFHSENLAFHSPPAKVKKEPQSPCSDPALSCSHKQPFQYRNGEQCLYASAYDQTRQAGLKSPNPGTPIQSPLQHFPRQDRSFLSPQGPSQPTSSRGYLMEHSSVFQPPTEMCRSFPSSRGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQANQLGNSSDHQYPAGVVIKQEQTDYAYDSDVPGCPSMYMNAEGYQSHSNTEGTLGYGYNKQMRPFADDVCVVPEKFEGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQPYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(361167..361221,361484..361531,380931..380984,388766..388892,390492..390650,391075..391325,399165..399239,399352..399420,400951..401120,402490..402591,403541..403762)
location: region:361167-403762:1
so has part: feature:361167-361221:1:exon
so has part: feature:361484-361531:1:exon
so has part: feature:380931-380984:1:exon
so has part: feature:388766-388892:1:exon
so has part: feature:390492-390650:1:exon
so has part: feature:391075-391325:1:exon
so has part: feature:399165-399239:1:exon
so has part: feature:399352-399420:1:exon
so has part: feature:400951-401120:1:exon
so has part: feature:402490-402591:1:exon
so has part: feature:403541-403762:1:exon

XP_030397526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361167-361221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361484-361531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380931-380984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388766-388892:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390492-390650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391075-391325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399165-399239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399352-399420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400951-401120:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:402490-402591:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:403541-403762:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X3
translation: MGAKRPMDPGLAPLQDSEELFQDLSQFQETWLTEAQVPDSDEQFVPDFHSENSFHSPPAKVKKEPQSPCSDPALSCSHKQPFQYRNGEQCLYASAYDQTRQAGLKSPNPGTPIQSPLQHFPRQDRSFLSPQGPSQPTSSRGYLMEHSSVFQPPTEMCRSFPSSRGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQANQLGNSSDHQYPAGVVIKQEQTDYAYDSDVPGCPSMYMNAEGYQSHSNTEGTLGYGYNKQMRPFADDVCVVPEKFEAGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQPYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(361167..361221,361484..361531,380931..380984,388769..388892,390492..390650,391075..391325,399165..399239,399352..399420,400948..401120,402490..402591,403541..403762)
location: region:361167-403762:1
so has part: feature:361167-361221:1:exon
so has part: feature:361484-361531:1:exon
so has part: feature:380931-380984:1:exon
so has part: feature:388769-388892:1:exon
so has part: feature:390492-390650:1:exon
so has part: feature:391075-391325:1:exon
so has part: feature:399165-399239:1:exon
so has part: feature:399352-399420:1:exon
so has part: feature:400948-401120:1:exon
so has part: feature:402490-402591:1:exon
so has part: feature:403541-403762:1:exon

XP_030397527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361167-361221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361484-361531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380931-380984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388769-388892:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390492-390650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391075-391325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399165-399239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399352-399420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400948-401120:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:402490-402591:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:403541-403762:1:exon

ETV4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: ETV4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 4 isoform X4
translation: MGAKRPMDPGLAPLQDSEELFQDLSQFQETWLTEAQVPDSDEQFVPDFHSENSFHSPPAKVKKEPQSPCSDPALSCSHKQPFQYRNGEQCLYASAYDQTRQAGLKSPNPGTPIQSPLQHFPRQDRSFLSPQGPSQPTSSRGYLMEHSSVFQPPTEMCRSFPSSRGMGREAPVAYQRQMSEPCLQYHPQGFKQEYHDPMYEQANQLGNSSDHQYPAGVVIKQEQTDYAYDSDVPGCPSMYMNAEGYQSHSNTEGTLGYGYNKQMRPFADDVCVVPEKFEGDIKQEVGGYREGPPYQRRGSLQLWQFLVALLDDPTNSHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPTLKAEFDRQISEEDTVPLSHLDENTAYIQDLGSLPSQPYSKSYPY
SIO_010081: ETV4
subclass of: SO_0000673
so part of: ETV4
location: join(361167..361221,361484..361531,380931..380984,388769..388892,390492..390650,391075..391325,399165..399239,399352..399420,400951..401120,402490..402591,403541..403762)
location: region:361167-403762:1
so has part: feature:361167-361221:1:exon
so has part: feature:361484-361531:1:exon
so has part: feature:380931-380984:1:exon
so has part: feature:388769-388892:1:exon
so has part: feature:390492-390650:1:exon
so has part: feature:391075-391325:1:exon
so has part: feature:399165-399239:1:exon
so has part: feature:399352-399420:1:exon
so has part: feature:400951-401120:1:exon
so has part: feature:402490-402591:1:exon
so has part: feature:403541-403762:1:exon

XP_030397528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361167-361221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361484-361531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380931-380984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388769-388892:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390492-390650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391075-391325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399165-399239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399352-399420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400951-401120:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:402490-402591:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:403541-403762:1:exon

DHX8
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: DHX8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(423135..441633)
location: region:423135-441633:-1
so has part: feature:423135-441633:-1:exon
subclass of: SO_0000010

115638990
type: Gene
SIO_000068: ncbigene

position:423135:-1
position: 423135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441633:-1
position: 441633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423135-441633:-1:exon

DHX8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: DHX8
product: DEAH-box helicase 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_030541215.1
SIO_010081: DHX8
subclass of: SO_0000673
so part of: DHX8
location: complement(join(423135..424811,425404..425583,425751..425947,427381..427509,428023..428160,428932..429087,429387..429527,430234..430415,430605..430815,431399..431584,431825..432019,432423..432604,433001..433148,433746..433843,434209..434296,435123..435326,436551..436695,437062..437373,437478..437587,438605..438690,439119..439191,439768..439853,441453..441633))
location: region:423135-441633:-1
so has part: feature:441453-441633:-1:exon
so has part: feature:439768-439853:-1:exon
so has part: feature:439119-439191:-1:exon
so has part: feature:438605-438690:-1:exon
so has part: feature:437478-437587:-1:exon
so has part: feature:437062-437373:-1:exon
so has part: feature:436551-436695:-1:exon
so has part: feature:435123-435326:-1:exon
so has part: feature:434209-434296:-1:exon
so has part: feature:433746-433843:-1:exon
so has part: feature:433001-433148:-1:exon
so has part: feature:432423-432604:-1:exon
so has part: feature:431825-432019:-1:exon
so has part: feature:431399-431584:-1:exon
so has part: feature:430605-430815:-1:exon
so has part: feature:430234-430415:-1:exon
so has part: feature:429387-429527:-1:exon
so has part: feature:428932-429087:-1:exon
so has part: feature:428023-428160:-1:exon
so has part: feature:427381-427509:-1:exon
so has part: feature:425751-425947:-1:exon
so has part: feature:425404-425583:-1:exon
so has part: feature:423135-424811:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441453-441633:-1:exon

position:441453:-1
position: 441453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:439768-439853:-1:exon

position:439768:-1
position: 439768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439853:-1
position: 439853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:439119-439191:-1:exon

position:439119:-1
position: 439119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439191:-1
position: 439191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:438605-438690:-1:exon

position:438605:-1
position: 438605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438690:-1
position: 438690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:437478-437587:-1:exon

position:437478:-1
position: 437478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437587:-1
position: 437587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:437062-437373:-1:exon

position:437062:-1
position: 437062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437373:-1
position: 437373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:436551-436695:-1:exon

position:436551:-1
position: 436551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436695:-1
position: 436695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:435123-435326:-1:exon

position:435123:-1
position: 435123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435326:-1
position: 435326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:434209-434296:-1:exon

position:434209:-1
position: 434209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434296:-1
position: 434296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:433746-433843:-1:exon

position:433746:-1
position: 433746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433843:-1
position: 433843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:433001-433148:-1:exon

position:433001:-1
position: 433001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433148:-1
position: 433148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:432423-432604:-1:exon

position:432423:-1
position: 432423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432604:-1
position: 432604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:431825-432019:-1:exon

position:431825:-1
position: 431825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432019:-1
position: 432019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:431399-431584:-1:exon

position:431399:-1
position: 431399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431584:-1
position: 431584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:430605-430815:-1:exon

position:430605:-1
position: 430605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430815:-1
position: 430815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:430234-430415:-1:exon

position:430234:-1
position: 430234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430415:-1
position: 430415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:429387-429527:-1:exon

position:429387:-1
position: 429387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429527:-1
position: 429527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:428932-429087:-1:exon

position:428932:-1
position: 428932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429087:-1
position: 429087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:428023-428160:-1:exon

position:428023:-1
position: 428023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428160:-1
position: 428160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:427381-427509:-1:exon

position:427381:-1
position: 427381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427509:-1
position: 427509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:425751-425947:-1:exon

position:425751:-1
position: 425751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425947:-1
position: 425947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:425404-425583:-1:exon

position:425404:-1
position: 425404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425583:-1
position: 425583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:423135-424811:-1:exon

position:424811:-1
position: 424811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHX8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: DHX8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DHX8
translation: MGDPAGADELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVINLAEKNTTFDTFKVALTKNGAEFTDSLISNLLRLIQTMRPPAKPSTGKEVVVKPKTEKEKLKDLFPALCRPDNPTIRTMLDEDDVKVAVDALKELEALMPSAGGQEKQRNTDHRAKKKRRSRSHDRDRKRRHRSRSRSRSRTRDKNKGKSRYRSRSRSLSPSRDRKDREKYAEKSNDRWRDKHVDRPPPEEPSIGEIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNLVGEINEETSMRNPDRPSHLSLVNAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTHWVDPLPDVDGRQIAANMRGIGMMTNEIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
SIO_010081: DHX8
subclass of: SO_0000673
so part of: DHX8
location: complement(join(424592..424811,425404..425583,425751..425947,427381..427509,428023..428160,428932..429087,429387..429527,430234..430415,430605..430815,431399..431584,431825..432019,432423..432604,433001..433148,433746..433843,434209..434296,435123..435326,436551..436695,437062..437373,437478..437587,438605..438690,439119..439191,439768..439853,441453..441564))
location: region:424592-441564:-1
so has part: feature:441453-441564:-1:exon
so has part: feature:439768-439853:-1:exon
so has part: feature:439119-439191:-1:exon
so has part: feature:438605-438690:-1:exon
so has part: feature:437478-437587:-1:exon
so has part: feature:437062-437373:-1:exon
so has part: feature:436551-436695:-1:exon
so has part: feature:435123-435326:-1:exon
so has part: feature:434209-434296:-1:exon
so has part: feature:433746-433843:-1:exon
so has part: feature:433001-433148:-1:exon
so has part: feature:432423-432604:-1:exon
so has part: feature:431825-432019:-1:exon
so has part: feature:431399-431584:-1:exon
so has part: feature:430605-430815:-1:exon
so has part: feature:430234-430415:-1:exon
so has part: feature:429387-429527:-1:exon
so has part: feature:428932-429087:-1:exon
so has part: feature:428023-428160:-1:exon
so has part: feature:427381-427509:-1:exon
so has part: feature:425751-425947:-1:exon
so has part: feature:425404-425583:-1:exon
so has part: feature:424592-424811:-1:exon

XP_030397075.1
type: Protein
SIO_000068: ncbiprotein

position:424592:-1
position: 424592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441564:-1
position: 441564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441453-441564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439768-439853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439119-439191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438605-438690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437478-437587:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:437062-437373:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:436551-436695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435123-435326:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:434209-434296:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:433746-433843:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:433001-433148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:432423-432604:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:431825-432019:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:431399-431584:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:430605-430815:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:430234-430415:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:429387-429527:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:428932-429087:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:428023-428160:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:427381-427509:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:425751-425947:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:425404-425583:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:424592-424811:-1:exon

ARL4D
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: ARL4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(529470..532326)
location: region:529470-532326:-1
so has part: feature:529470-532326:-1:exon
subclass of: SO_0000010

115639206
type: Gene
SIO_000068: ncbigene

position:529470:-1
position: 529470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532326:-1
position: 532326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529470-532326:-1:exon

ARL4D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: ARL4D
product: ADP ribosylation factor like GTPase 4D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030541679.1
SIO_010081: ARL4D
subclass of: SO_0000673
so part of: ARL4D
location: complement(join(529470..531879,532246..532326))
location: region:529470-532326:-1
so has part: feature:532246-532326:-1:exon
so has part: feature:529470-531879:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532246-532326:-1:exon

position:532246:-1
position: 532246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529470-531879:-1:exon

position:531879:-1
position: 531879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL4D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: ARL4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 4D
translation: MGNQLAEIAPAPPFLPHFQALHVVVIGLDAAGKTSLLYRLKFKEFVKSAPTKGFNMEKIRVPLAGSRAIAFQVWDVGGQEKLRPLWKSYTRRTDGLVFVVDSAEGERLEEARVELHRITRTSENQGVPVLILANKQDLPGALAASEVEKLLALHELSASTLSCTQACSAVDGLGLQQGLEKLYEMILKRKKMLRHSKKRR
SIO_010081: ARL4D
subclass of: SO_0000673
so part of: ARL4D
location: complement(531235..531837)
location: region:531235-531837:-1
so has part: feature:531235-531837:-1:exon

XP_030397539.1
type: Protein
SIO_000068: ncbiprotein

position:531235:-1
position: 531235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531837:-1
position: 531837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531235-531837:-1:exon

LOC115639046
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115639046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(535834..537455)
location: region:535834-537455:-1
so has part: feature:535834-537455:-1:exon
subclass of: SO_0000010

115639046
type: Gene
SIO_000068: ncbigene

position:535834:-1
position: 535834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537455:-1
position: 537455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535834-537455:-1:exon

LOC115639046
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115639046
product: spidroin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030541343.1
SIO_010081: LOC115639046
subclass of: SO_0000673
so part of: LOC115639046
location: complement(join(535834..537308,537350..537455))
location: region:535834-537455:-1
so has part: feature:537350-537455:-1:exon
so has part: feature:535834-537308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537350-537455:-1:exon

position:537350:-1
position: 537350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535834-537308:-1:exon

position:537308:-1
position: 537308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115639046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115639046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spidroin-2-like
translation: MGPGRGRLCPAQPQLQPPGPGLTMRRRLPGNRVRGDGALRPGSRQGALRCAASGVGDRASARGRCAALPRAPGTGLPPGGAALRCLGRRGPGSRQGALRCTASGAGDRASRQGALRCAVSGTSWGSAARAPSQGALRCAASGVGDRAPRQGALRCAASGAGDRAPARGRCAASGAGDRAPRQGALRCAALPCLRRWGPGSRQGALRCLRRRGPGSRQGALRCAASGAGDRAPARGRCAALPRAPGTGLPARGRCAALPRALGTGLPPGGAVLPCLRRRGPGSRQGALRCAVSGTSWGSAARAPSQGALRCAASGAGDRASARARCAALPQAPGTGLPPGGAALRCLGRWGPGSRQGALRCAASGAGDRAPRQGALCCPASGAGDRAPARGRCAALPQAPGTGLPPGGAALRCLRRRGPGFRQGALRCAVSGAGDQLGLCGPGSRQGALHCPASGARDRAPRQGALRCAASGAGDQLGLCGLGSRQGALHCPASGAGDRAPARGCCAALSQAPGTSWGFAARAPARG
SIO_010081: LOC115639046
subclass of: SO_0000673
so part of: LOC115639046
location: complement(join(535834..537308,537350..537455))
location: region:535834-537455:-1
so has part: feature:537350-537455:-1:exon
so has part: feature:535834-537308:-1:exon

XP_030397203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537350-537455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535834-537308:-1:exon

CCDC200
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: CCDC200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 537394..539795
location: region:537394-539795:1
so has part: feature:537394-539795:1:exon
subclass of: SO_0000010

115639040
type: Gene
SIO_000068: ncbigene

position:537394:1
position: 537394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539795:1
position: 539795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537394-539795:1:exon

CCDC200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CCDC200
product: coiled-coil domain containing 200, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030541332.1
SIO_010081: CCDC200
subclass of: SO_0000673
so part of: CCDC200
location: join(537394..537531,537961..538048,538866..538948,539575..539795)
location: region:537394-539795:1
so has part: feature:537394-537531:1:exon
so has part: feature:537961-538048:1:exon
so has part: feature:538866-538948:1:exon
so has part: feature:539575-539795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537394-537531:1:exon

position:537531:1
position: 537531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537961-538048:1:exon

position:537961:1
position: 537961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538048:1
position: 538048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:538866-538948:1:exon

position:538866:1
position: 538866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538948:1
position: 538948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:539575-539795:1:exon

position:539575:1
position: 539575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CCDC200
product: coiled-coil domain containing 200, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030541334.1
SIO_010081: CCDC200
subclass of: SO_0000673
so part of: CCDC200
location: join(537394..537531,537961..538048,538869..538948,539575..539795)
location: region:537394-539795:1
so has part: feature:537394-537531:1:exon
so has part: feature:537961-538048:1:exon
so has part: feature:538869-538948:1:exon
so has part: feature:539575-539795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537394-537531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537961-538048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538869-538948:1:exon

position:538869:1
position: 538869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:539575-539795:1:exon

CCDC200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CCDC200
product: coiled-coil domain containing 200, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030541333.1
SIO_010081: CCDC200
subclass of: SO_0000673
so part of: CCDC200
location: join(537394..537531,537964..538048,538866..538948,539575..539795)
location: region:537394-539795:1
so has part: feature:537394-537531:1:exon
so has part: feature:537964-538048:1:exon
so has part: feature:538866-538948:1:exon
so has part: feature:539575-539795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537394-537531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537964-538048:1:exon

position:537964:1
position: 537964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:538866-538948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:539575-539795:1:exon

CCDC200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CCDC200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 200 isoform X1
translation: MSAYHWEARRRQLVLERRRRNQLLQQKAEEAAKKAPEQRPEISPSQLQPQGPPRPEVTCSCQCCPCKCHYMTISSAKLPRRFSAVQYIQQW
SIO_010081: CCDC200
subclass of: SO_0000673
so part of: CCDC200
location: join(537454..537531,537961..538048,538866..538948,539575..539601)
location: region:537454-539601:1
so has part: feature:537454-537531:1:exon
so has part: feature:537961-538048:1:exon
so has part: feature:538866-538948:1:exon
so has part: feature:539575-539601:1:exon

XP_030397192.1
type: Protein
SIO_000068: ncbiprotein

position:537454:1
position: 537454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539601:1
position: 539601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537454-537531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537961-538048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538866-538948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:539575-539601:1:exon

CCDC200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CCDC200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 200 isoform X3
translation: MSAYHWEARRRQLVLERRRRNQLLQQKAEEAAKKAPEQRPEISPSQLQPQGPPRPVTCSCQCCPCKCHYMTISSAKLPRRFSAVQYIQQW
SIO_010081: CCDC200
subclass of: SO_0000673
so part of: CCDC200
location: join(537454..537531,537961..538048,538869..538948,539575..539601)
location: region:537454-539601:1
so has part: feature:537454-537531:1:exon
so has part: feature:537961-538048:1:exon
so has part: feature:538869-538948:1:exon
so has part: feature:539575-539601:1:exon

XP_030397194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537454-537531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537961-538048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538869-538948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:539575-539601:1:exon

CCDC200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CCDC200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 200 isoform X2
translation: MSAYHWEARRRQLVLERRRRNQLLQQAEEAAKKAPEQRPEISPSQLQPQGPPRPEVTCSCQCCPCKCHYMTISSAKLPRRFSAVQYIQQW
SIO_010081: CCDC200
subclass of: SO_0000673
so part of: CCDC200
location: join(537454..537531,537964..538048,538866..538948,539575..539601)
location: region:537454-539601:1
so has part: feature:537454-537531:1:exon
so has part: feature:537964-538048:1:exon
so has part: feature:538866-538948:1:exon
so has part: feature:539575-539601:1:exon

XP_030397193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537454-537531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537964-538048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538866-538948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:539575-539601:1:exon

TMEM106A
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: TMEM106A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(543085..555225)
location: region:543085-555225:-1
so has part: feature:543085-555225:-1:exon
subclass of: SO_0000010

115639124
type: Gene
SIO_000068: ncbigene

position:543085:-1
position: 543085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555225:-1
position: 555225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543085-555225:-1:exon

TMEM106A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TMEM106A
product: transmembrane protein 106A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030541523.1
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(543085..543520,544100..544153,545076..545119,546312..546471,546977..547040,547505..547751,548629..548840,555118..555225))
location: region:543085-555225:-1
so has part: feature:555118-555225:-1:exon
so has part: feature:548629-548840:-1:exon
so has part: feature:547505-547751:-1:exon
so has part: feature:546977-547040:-1:exon
so has part: feature:546312-546471:-1:exon
so has part: feature:545076-545119:-1:exon
so has part: feature:544100-544153:-1:exon
so has part: feature:543085-543520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:555118-555225:-1:exon

position:555118:-1
position: 555118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548629-548840:-1:exon

position:548629:-1
position: 548629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548840:-1
position: 548840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547505-547751:-1:exon

position:547505:-1
position: 547505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547751:-1
position: 547751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:546977-547040:-1:exon

position:546977:-1
position: 546977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547040:-1
position: 547040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:546312-546471:-1:exon

position:546312:-1
position: 546312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546471:-1
position: 546471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:545076-545119:-1:exon

position:545076:-1
position: 545076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545119:-1
position: 545119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:544100-544153:-1:exon

position:544100:-1
position: 544100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544153:-1
position: 544153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:543085-543520:-1:exon

position:543520:-1
position: 543520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM106A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TMEM106A
product: transmembrane protein 106A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030541518.1
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(543085..543520,544100..544153,545076..545119,545574..545714,546312..546471,546977..547040,547505..547751,548629..548840,555118..555224))
location: region:543085-555224:-1
so has part: feature:555118-555224:-1:exon
so has part: feature:548629-548840:-1:exon
so has part: feature:547505-547751:-1:exon
so has part: feature:546977-547040:-1:exon
so has part: feature:546312-546471:-1:exon
so has part: feature:545574-545714:-1:exon
so has part: feature:545076-545119:-1:exon
so has part: feature:544100-544153:-1:exon
so has part: feature:543085-543520:-1:exon

position:555224:-1
position: 555224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555118-555224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548629-548840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547505-547751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:546977-547040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:546312-546471:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545574-545714:-1:exon

position:545574:-1
position: 545574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545714:-1
position: 545714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:545076-545119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:544100-544153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543085-543520:-1:exon

TMEM106A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TMEM106A
product: transmembrane protein 106A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030541519.1
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(543085..543520,544100..544153,545076..545119,545574..545714,546312..546471,546977..547040,547505..547751,555118..555219))
location: region:543085-555219:-1
so has part: feature:555118-555219:-1:exon
so has part: feature:547505-547751:-1:exon
so has part: feature:546977-547040:-1:exon
so has part: feature:546312-546471:-1:exon
so has part: feature:545574-545714:-1:exon
so has part: feature:545076-545119:-1:exon
so has part: feature:544100-544153:-1:exon
so has part: feature:543085-543520:-1:exon

position:555219:-1
position: 555219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555118-555219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547505-547751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546977-547040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:546312-546471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545574-545714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545076-545119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544100-544153:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543085-543520:-1:exon

TMEM106A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TMEM106A
product: transmembrane protein 106A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030541520.1
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(543085..543520,544100..544153,545076..545119,545574..545714,546312..546471,546977..547040,547505..547751,552401..552513))
location: region:543085-552513:-1
so has part: feature:552401-552513:-1:exon
so has part: feature:547505-547751:-1:exon
so has part: feature:546977-547040:-1:exon
so has part: feature:546312-546471:-1:exon
so has part: feature:545574-545714:-1:exon
so has part: feature:545076-545119:-1:exon
so has part: feature:544100-544153:-1:exon
so has part: feature:543085-543520:-1:exon

position:552513:-1
position: 552513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552401-552513:-1:exon

position:552401:-1
position: 552401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547505-547751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546977-547040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:546312-546471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545574-545714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545076-545119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544100-544153:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543085-543520:-1:exon

TMEM106A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TMEM106A
product: transmembrane protein 106A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030541521.1
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(543085..543520,544100..544153,545076..545119,545574..545714,546312..546471,546977..547040,547505..547751,551824..551917))
location: region:543085-551917:-1
so has part: feature:551824-551917:-1:exon
so has part: feature:547505-547751:-1:exon
so has part: feature:546977-547040:-1:exon
so has part: feature:546312-546471:-1:exon
so has part: feature:545574-545714:-1:exon
so has part: feature:545076-545119:-1:exon
so has part: feature:544100-544153:-1:exon
so has part: feature:543085-543520:-1:exon

position:551917:-1
position: 551917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551824-551917:-1:exon

position:551824:-1
position: 551824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547505-547751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546977-547040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:546312-546471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545574-545714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545076-545119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544100-544153:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543085-543520:-1:exon

TMEM106A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TMEM106A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106A isoform X2
translation: MGQMFSQFWKVSDQKERGGKSILRRKSAGEDEVTNYGTINGGDSAASCMPCVGTVSRGCINCPTCQGTGRIPREQEKQLVALIPYGDQRLKPRRTKLYVSLAVTICLLMSSLIIFFLFPRSIVVQPAGLNASSIAFNSTVSSINLNMTIYYSVSSIIRDYNTYNICTWIKIKVHNVLLHIQGTLTCSYLCHSEQLAFERYQYVDCRGNATLPHPLYHRPP
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(543400..543520,544100..544153,545076..545119,546312..546471,546977..547040,547505..547724))
location: region:543400-547724:-1
so has part: feature:547505-547724:-1:exon
so has part: feature:546977-547040:-1:exon
so has part: feature:546312-546471:-1:exon
so has part: feature:545076-545119:-1:exon
so has part: feature:544100-544153:-1:exon
so has part: feature:543400-543520:-1:exon

XP_030397383.1
type: Protein
SIO_000068: ncbiprotein

position:543400:-1
position: 543400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547724:-1
position: 547724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547505-547724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546977-547040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546312-546471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545076-545119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544100-544153:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543400-543520:-1:exon

TMEM106A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TMEM106A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106A isoform X1
translation: MGQMFSQFWKVSDQKERGGKSILRRKSAGEDEVTNYGTINGGDSAASCMPCVGTVSRGCINCPTCQGTGRIPREQEKQLVALIPYGDQRLKPRRTKLYVSLAVTICLLMSSLIIFFLFPRSIVVQPAGLNASSIAFNSTVSSINLNMTNVLNVTNNNFYPVTVTQLDIEVLHLSVVIGKTTKRNLLNIGPLCSGQIYYSVSSIIRDYNTYNICTWIKIKVHNVLLHIQGTLTCSYLCHSEQLAFERYQYVDCRGNATLPHPLYHRPP
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(543400..543520,544100..544153,545076..545119,545574..545714,546312..546471,546977..547040,547505..547724))
location: region:543400-547724:-1
so has part: feature:547505-547724:-1:exon
so has part: feature:546977-547040:-1:exon
so has part: feature:546312-546471:-1:exon
so has part: feature:545574-545714:-1:exon
so has part: feature:545076-545119:-1:exon
so has part: feature:544100-544153:-1:exon
so has part: feature:543400-543520:-1:exon

XP_030397378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547505-547724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546977-547040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546312-546471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545574-545714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545076-545119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544100-544153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543400-543520:-1:exon

TMEM106A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TMEM106A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106A isoform X1
translation: MGQMFSQFWKVSDQKERGGKSILRRKSAGEDEVTNYGTINGGDSAASCMPCVGTVSRGCINCPTCQGTGRIPREQEKQLVALIPYGDQRLKPRRTKLYVSLAVTICLLMSSLIIFFLFPRSIVVQPAGLNASSIAFNSTVSSINLNMTNVLNVTNNNFYPVTVTQLDIEVLHLSVVIGKTTKRNLLNIGPLCSGQIYYSVSSIIRDYNTYNICTWIKIKVHNVLLHIQGTLTCSYLCHSEQLAFERYQYVDCRGNATLPHPLYHRPP
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(543400..543520,544100..544153,545076..545119,545574..545714,546312..546471,546977..547040,547505..547724))
location: region:543400-547724:-1
so has part: feature:547505-547724:-1:exon
so has part: feature:546977-547040:-1:exon
so has part: feature:546312-546471:-1:exon
so has part: feature:545574-545714:-1:exon
so has part: feature:545076-545119:-1:exon
so has part: feature:544100-544153:-1:exon
so has part: feature:543400-543520:-1:exon

XP_030397379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547505-547724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546977-547040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546312-546471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545574-545714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545076-545119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544100-544153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543400-543520:-1:exon

TMEM106A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TMEM106A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106A isoform X1
translation: MGQMFSQFWKVSDQKERGGKSILRRKSAGEDEVTNYGTINGGDSAASCMPCVGTVSRGCINCPTCQGTGRIPREQEKQLVALIPYGDQRLKPRRTKLYVSLAVTICLLMSSLIIFFLFPRSIVVQPAGLNASSIAFNSTVSSINLNMTNVLNVTNNNFYPVTVTQLDIEVLHLSVVIGKTTKRNLLNIGPLCSGQIYYSVSSIIRDYNTYNICTWIKIKVHNVLLHIQGTLTCSYLCHSEQLAFERYQYVDCRGNATLPHPLYHRPP
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(543400..543520,544100..544153,545076..545119,545574..545714,546312..546471,546977..547040,547505..547724))
location: region:543400-547724:-1
so has part: feature:547505-547724:-1:exon
so has part: feature:546977-547040:-1:exon
so has part: feature:546312-546471:-1:exon
so has part: feature:545574-545714:-1:exon
so has part: feature:545076-545119:-1:exon
so has part: feature:544100-544153:-1:exon
so has part: feature:543400-543520:-1:exon

XP_030397380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547505-547724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546977-547040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546312-546471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545574-545714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545076-545119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544100-544153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543400-543520:-1:exon

TMEM106A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TMEM106A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106A isoform X1
translation: MGQMFSQFWKVSDQKERGGKSILRRKSAGEDEVTNYGTINGGDSAASCMPCVGTVSRGCINCPTCQGTGRIPREQEKQLVALIPYGDQRLKPRRTKLYVSLAVTICLLMSSLIIFFLFPRSIVVQPAGLNASSIAFNSTVSSINLNMTNVLNVTNNNFYPVTVTQLDIEVLHLSVVIGKTTKRNLLNIGPLCSGQIYYSVSSIIRDYNTYNICTWIKIKVHNVLLHIQGTLTCSYLCHSEQLAFERYQYVDCRGNATLPHPLYHRPP
SIO_010081: TMEM106A
subclass of: SO_0000673
so part of: TMEM106A
location: complement(join(543400..543520,544100..544153,545076..545119,545574..545714,546312..546471,546977..547040,547505..547724))
location: region:543400-547724:-1
so has part: feature:547505-547724:-1:exon
so has part: feature:546977-547040:-1:exon
so has part: feature:546312-546471:-1:exon
so has part: feature:545574-545714:-1:exon
so has part: feature:545076-545119:-1:exon
so has part: feature:544100-544153:-1:exon
so has part: feature:543400-543520:-1:exon

XP_030397381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547505-547724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546977-547040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546312-546471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545574-545714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545076-545119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544100-544153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543400-543520:-1:exon

NBR1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: NBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(557135..585263)
location: region:557135-585263:-1
so has part: feature:557135-585263:-1:exon
subclass of: SO_0000010

115638916
type: Gene
SIO_000068: ncbigene

position:557135:-1
position: 557135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585263:-1
position: 585263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557135-585263:-1:exon

NBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: NBR1
product: NBR1 autophagy cargo receptor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030541001.1
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(557135..559643,561662..561767,562617..562698,563435..563529,563806..564169,566798..566931,567059..567220,567928..568038,568601..568676,569214..569365,570012..570299,570845..571004,572256..572462,573064..573223,574228..574445,575645..575719,576486..576704,577518..577540,578441..578459,579799..579861,582717..582827,584628..584856,585165..585263))
location: region:557135-585263:-1
so has part: feature:585165-585263:-1:exon
so has part: feature:584628-584856:-1:exon
so has part: feature:582717-582827:-1:exon
so has part: feature:579799-579861:-1:exon
so has part: feature:578441-578459:-1:exon
so has part: feature:577518-577540:-1:exon
so has part: feature:576486-576704:-1:exon
so has part: feature:575645-575719:-1:exon
so has part: feature:574228-574445:-1:exon
so has part: feature:573064-573223:-1:exon
so has part: feature:572256-572462:-1:exon
so has part: feature:570845-571004:-1:exon
so has part: feature:570012-570299:-1:exon
so has part: feature:569214-569365:-1:exon
so has part: feature:568601-568676:-1:exon
so has part: feature:567928-568038:-1:exon
so has part: feature:567059-567220:-1:exon
so has part: feature:566798-566931:-1:exon
so has part: feature:563806-564169:-1:exon
so has part: feature:563435-563529:-1:exon
so has part: feature:562617-562698:-1:exon
so has part: feature:561662-561767:-1:exon
so has part: feature:557135-559643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585165-585263:-1:exon

position:585165:-1
position: 585165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:584628-584856:-1:exon

position:584628:-1
position: 584628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584856:-1
position: 584856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:582717-582827:-1:exon

position:582717:-1
position: 582717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582827:-1
position: 582827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:579799-579861:-1:exon

position:579799:-1
position: 579799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579861:-1
position: 579861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:578441-578459:-1:exon

position:578441:-1
position: 578441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578459:-1
position: 578459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:577518-577540:-1:exon

position:577518:-1
position: 577518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577540:-1
position: 577540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:576486-576704:-1:exon

position:576486:-1
position: 576486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576704:-1
position: 576704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:575645-575719:-1:exon

position:575645:-1
position: 575645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575719:-1
position: 575719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:574228-574445:-1:exon

position:574228:-1
position: 574228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574445:-1
position: 574445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:573064-573223:-1:exon

position:573064:-1
position: 573064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573223:-1
position: 573223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:572256-572462:-1:exon

position:572256:-1
position: 572256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572462:-1
position: 572462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:570845-571004:-1:exon

position:570845:-1
position: 570845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571004:-1
position: 571004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:570012-570299:-1:exon

position:570012:-1
position: 570012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570299:-1
position: 570299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:569214-569365:-1:exon

position:569214:-1
position: 569214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569365:-1
position: 569365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:568601-568676:-1:exon

position:568601:-1
position: 568601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568676:-1
position: 568676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:567928-568038:-1:exon

position:567928:-1
position: 567928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568038:-1
position: 568038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:567059-567220:-1:exon

position:567059:-1
position: 567059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567220:-1
position: 567220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:566798-566931:-1:exon

position:566798:-1
position: 566798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566931:-1
position: 566931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:563806-564169:-1:exon

position:563806:-1
position: 563806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564169:-1
position: 564169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:563435-563529:-1:exon

position:563435:-1
position: 563435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563529:-1
position: 563529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:562617-562698:-1:exon

position:562617:-1
position: 562617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562698:-1
position: 562698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:561662-561767:-1:exon

position:561662:-1
position: 561662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561767:-1
position: 561767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:557135-559643:-1:exon

position:559643:-1
position: 559643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: NBR1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: next to BRCA1 gene 1 protein
translation: MLGASVTTVRSERRRELPPAQGTAEPPPFPAGTGLRRPHSMEPQVNLSVTFRGETQSFLVSDSSNTTWADVEAMVKVSFDLNNIQIKYMDEDNDEVSVNSEEEYEEALKIAVTQGNQIQMKVYQVNSLPSETAHSCSTQVCEKAGLEKLSIPKDGKRPLSHYSMLAQALGQDIKAERETTAQQKLNQNEAEGTSEKPPEWFTSYLESFREQVVKETVEKLEQKLSEKLILRNQPPDSSSSSTVIAQPAPETQSTQGSQCDWLISCSNCHARIVGIRYQCSVCPSYSICEPCEAGTYAHDLXSCLVKLRACSCVSETYSIGQFLSSSPATLEQVRLQKQMDKRFLKAEKQRLRAEKKQRKAEVRELKKQLKLHRKIHLWNSVHALEITGSPAIKPESLQPSALMSPIQPCPAVVPTLSAAFVDENLPDGTRIQPGTKFIKHWRMKNTGNVEWSSDTKLKFMWGNLTLGSSEKKDVLVPSLPAGQVGIVSVEFIAPALEGTYASHWRLSHKGEQFGPRVWCSIVVDPSAVAACLERNQKTSSSSLKDKDSCRNEVFSSKSESEGQEAGEGMEQTDLPVPGIPLKIXNIPSEREFYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIEEENEGNGFKPVPDAHMVKMKAEHPVNLEEGEEDMSGTQFVCETVIRSLTLDAAPDHKPPQRKKSLQSSLQTLQDTFSYSXKSEEAVRTKSNSASQPKEMGSKSQQTEENKFEKLAVSDRANLSGEPSDAEYEEEEDVKDEIQSQVSSASSEDYIIILPECFDTSRPLGESMYSSALSQPSLERAIDTDMEMVIPEGESQPQVHNINDILTTSQTLAAVPLTPEIISTLPQPQRNPSSLQSHGLQKANLPFTEEIPSTVPDQIREEPRYEDFPGLGPSRIVNNNKSKCPEYARHPQGSSIAGGLVKGALSVATSAYKALFAGQSIAEQPTTTEEQTATLLANLCEMGFCDRQLNLRLLKKHNYNIVQVVTELLQINNNDWYSSRY
SIO_010081: NBR1
subclass of: SO_0000673
so part of: NBR1
location: complement(join(559470..559643,561662..561767,562617..562698,563435..563529,563806..564169,566798..566931,567059..567220,567928..568038,568601..568676,569214..569365,570012..570299,570845..571004,572256..572462,573064..573223,574228..574445,575645..575719,576486..576704,577518..577540,578441..578459,579799..579861,582717..582827,584628..584738))
location: region:559470-584738:-1
so has part: feature:584628-584738:-1:exon
so has part: feature:582717-582827:-1:exon
so has part: feature:579799-579861:-1:exon
so has part: feature:578441-578459:-1:exon
so has part: feature:577518-577540:-1:exon
so has part: feature:576486-576704:-1:exon
so has part: feature:575645-575719:-1:exon
so has part: feature:574228-574445:-1:exon
so has part: feature:573064-573223:-1:exon
so has part: feature:572256-572462:-1:exon
so has part: feature:570845-571004:-1:exon
so has part: feature:570012-570299:-1:exon
so has part: feature:569214-569365:-1:exon
so has part: feature:568601-568676:-1:exon
so has part: feature:567928-568038:-1:exon
so has part: feature:567059-567220:-1:exon
so has part: feature:566798-566931:-1:exon
so has part: feature:563806-564169:-1:exon
so has part: feature:563435-563529:-1:exon
so has part: feature:562617-562698:-1:exon
so has part: feature:561662-561767:-1:exon
so has part: feature:559470-559643:-1:exon

XP_030396861.1
type: Protein
SIO_000068: ncbiprotein

position:559470:-1
position: 559470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584738:-1
position: 584738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584628-584738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582717-582827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:579799-579861:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578441-578459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577518-577540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576486-576704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575645-575719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574228-574445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573064-573223:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572256-572462:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:570845-571004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:570012-570299:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:569214-569365:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:568601-568676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:567928-568038:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:567059-567220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:566798-566931:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:563806-564169:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:563435-563529:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:562617-562698:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:561662-561767:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:559470-559643:-1:exon

BRCA1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: BRCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 585438..634085
location: region:585438-634085:1
so has part: feature:585438-634085:1:exon
subclass of: SO_0000010

115638951
type: Gene
SIO_000068: ncbigene

position:585438:1
position: 585438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634085:1
position: 634085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585438-634085:1:exon

BRCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: BRCA1
product: BRCA1 DNA repair associated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030541134.1
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(585438..585501,588863..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,604516..607977,609831..609916,612061..612235,613812..613944,617009..617208,617738..618060,619949..620036,620667..620744,621052..621092,625776..625859,628132..628186,630979..631052,631619..631679,632769..634085)
location: region:585438-634085:1
so has part: feature:585438-585501:1:exon
so has part: feature:588863-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:604516-607977:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:613812-613944:1:exon
so has part: feature:617009-617208:1:exon
so has part: feature:617738-618060:1:exon
so has part: feature:619949-620036:1:exon
so has part: feature:620667-620744:1:exon
so has part: feature:621052-621092:1:exon
so has part: feature:625776-625859:1:exon
so has part: feature:628132-628186:1:exon
so has part: feature:630979-631052:1:exon
so has part: feature:631619-631679:1:exon
so has part: feature:632769-634085:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585438-585501:1:exon

position:585501:1
position: 585501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:588863-588962:1:exon

position:588863:1
position: 588863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588962:1
position: 588962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:595161-595214:1:exon

position:595161:1
position: 595161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595214:1
position: 595214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:595567-595647:1:exon

position:595567:1
position: 595567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595647:1
position: 595647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:596195-596283:1:exon

position:596195:1
position: 596195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596283:1
position: 596283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:597462-597601:1:exon

position:597462:1
position: 597462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597601:1
position: 597601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:598627-598732:1:exon

position:598627:1
position: 598627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598732:1
position: 598732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:599715-599760:1:exon

position:599715:1
position: 599715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599760:1
position: 599760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:603005-603153:1:exon

position:603005:1
position: 603005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603153:1
position: 603153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:604516-607977:1:exon

position:604516:1
position: 604516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607977:1
position: 607977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:609831-609916:1:exon

position:609831:1
position: 609831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609916:1
position: 609916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:612061-612235:1:exon

position:612061:1
position: 612061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612235:1
position: 612235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:613812-613944:1:exon

position:613812:1
position: 613812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613944:1
position: 613944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:617009-617208:1:exon

position:617009:1
position: 617009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617208:1
position: 617208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:617738-618060:1:exon

position:617738:1
position: 617738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618060:1
position: 618060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:619949-620036:1:exon

position:619949:1
position: 619949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620036:1
position: 620036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:620667-620744:1:exon

position:620667:1
position: 620667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620744:1
position: 620744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:621052-621092:1:exon

position:621052:1
position: 621052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621092:1
position: 621092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:625776-625859:1:exon

position:625776:1
position: 625776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625859:1
position: 625859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:628132-628186:1:exon

position:628132:1
position: 628132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628186:1
position: 628186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:630979-631052:1:exon

position:630979:1
position: 630979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631052:1
position: 631052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:631619-631679:1:exon

position:631619:1
position: 631619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631679:1
position: 631679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:632769-634085:1:exon

position:632769:1
position: 632769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: BRCA1
product: BRCA1 DNA repair associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030541133.1
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(585443..585501,586853..586983,588863..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,604516..607977,609831..609916,612061..612235,613812..613944,617009..617208,617738..618060,619949..620036,620667..620744,621052..621092,625776..625859,628132..628186,630979..631052,631619..631679,632769..634085)
location: region:585443-634085:1
so has part: feature:585443-585501:1:exon
so has part: feature:586853-586983:1:exon
so has part: feature:588863-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:604516-607977:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:613812-613944:1:exon
so has part: feature:617009-617208:1:exon
so has part: feature:617738-618060:1:exon
so has part: feature:619949-620036:1:exon
so has part: feature:620667-620744:1:exon
so has part: feature:621052-621092:1:exon
so has part: feature:625776-625859:1:exon
so has part: feature:628132-628186:1:exon
so has part: feature:630979-631052:1:exon
so has part: feature:631619-631679:1:exon
so has part: feature:632769-634085:1:exon

position:585443:1
position: 585443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585443-585501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586853-586983:1:exon

position:586853:1
position: 586853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586983:1
position: 586983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:588863-588962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595161-595214:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595567-595647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:596195-596283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:597462-597601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598627-598732:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599715-599760:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:603005-603153:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604516-607977:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:609831-609916:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:612061-612235:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:613812-613944:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:617009-617208:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:617738-618060:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:619949-620036:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:620667-620744:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621052-621092:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:625776-625859:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:628132-628186:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:630979-631052:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:631619-631679:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:632769-634085:1:exon

BRCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: BRCA1
product: BRCA1 DNA repair associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030541132.1
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(585468..585501,586509..586655,586853..586983,588863..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,604516..607977,609831..609916,612061..612235,613812..613944,617009..617208,617738..618060,619949..620036,620667..620744,621052..621092,625776..625859,628132..628186,630979..631052,631619..631679,632769..634085)
location: region:585468-634085:1
so has part: feature:585468-585501:1:exon
so has part: feature:586509-586655:1:exon
so has part: feature:586853-586983:1:exon
so has part: feature:588863-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:604516-607977:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:613812-613944:1:exon
so has part: feature:617009-617208:1:exon
so has part: feature:617738-618060:1:exon
so has part: feature:619949-620036:1:exon
so has part: feature:620667-620744:1:exon
so has part: feature:621052-621092:1:exon
so has part: feature:625776-625859:1:exon
so has part: feature:628132-628186:1:exon
so has part: feature:630979-631052:1:exon
so has part: feature:631619-631679:1:exon
so has part: feature:632769-634085:1:exon

position:585468:1
position: 585468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585468-585501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586509-586655:1:exon

position:586509:1
position: 586509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586655:1
position: 586655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:586853-586983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588863-588962:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595161-595214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:595567-595647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596195-596283:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597462-597601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598627-598732:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599715-599760:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:603005-603153:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:604516-607977:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:609831-609916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:612061-612235:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:613812-613944:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:617009-617208:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:617738-618060:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:619949-620036:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:620667-620744:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621052-621092:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:625776-625859:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:628132-628186:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:630979-631052:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:631619-631679:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:632769-634085:1:exon

BRCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: BRCA1
product: BRCA1 DNA repair associated, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030541135.1
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(585468..585501,586509..586655,586853..586983,588863..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,604516..607977,609831..609916,612061..612235,613812..613944,617015..617208,617738..618060,619949..620036,620667..620744,621052..621092,625776..625859,628132..628186,630979..631052,631619..631679,632769..634085)
location: region:585468-634085:1
so has part: feature:585468-585501:1:exon
so has part: feature:586509-586655:1:exon
so has part: feature:586853-586983:1:exon
so has part: feature:588863-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:604516-607977:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:613812-613944:1:exon
so has part: feature:617015-617208:1:exon
so has part: feature:617738-618060:1:exon
so has part: feature:619949-620036:1:exon
so has part: feature:620667-620744:1:exon
so has part: feature:621052-621092:1:exon
so has part: feature:625776-625859:1:exon
so has part: feature:628132-628186:1:exon
so has part: feature:630979-631052:1:exon
so has part: feature:631619-631679:1:exon
so has part: feature:632769-634085:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585468-585501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586509-586655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586853-586983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588863-588962:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595161-595214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:595567-595647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596195-596283:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597462-597601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598627-598732:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599715-599760:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:603005-603153:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:604516-607977:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:609831-609916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:612061-612235:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:613812-613944:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:617015-617208:1:exon

position:617015:1
position: 617015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:617738-618060:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:619949-620036:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:620667-620744:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621052-621092:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:625776-625859:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:628132-628186:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:630979-631052:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:631619-631679:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:632769-634085:1:exon

BRCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: BRCA1
product: BRCA1 DNA repair associated, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030541137.1
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(585468..585501,586509..586655,586853..586983,588863..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,609831..609916,612061..612235,613812..613944,617009..617208,617738..618060,619949..620036,620667..620744,621052..621092,625776..625859,628132..628186,630979..631052,631619..631679,632769..634004)
location: region:585468-634004:1
so has part: feature:585468-585501:1:exon
so has part: feature:586509-586655:1:exon
so has part: feature:586853-586983:1:exon
so has part: feature:588863-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:613812-613944:1:exon
so has part: feature:617009-617208:1:exon
so has part: feature:617738-618060:1:exon
so has part: feature:619949-620036:1:exon
so has part: feature:620667-620744:1:exon
so has part: feature:621052-621092:1:exon
so has part: feature:625776-625859:1:exon
so has part: feature:628132-628186:1:exon
so has part: feature:630979-631052:1:exon
so has part: feature:631619-631679:1:exon
so has part: feature:632769-634004:1:exon

position:634004:1
position: 634004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585468-585501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586509-586655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586853-586983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588863-588962:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595161-595214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:595567-595647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596195-596283:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597462-597601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598627-598732:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599715-599760:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:603005-603153:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:609831-609916:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:612061-612235:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:613812-613944:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:617009-617208:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:617738-618060:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:619949-620036:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:620667-620744:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621052-621092:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:625776-625859:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:628132-628186:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:630979-631052:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:631619-631679:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:632769-634004:1:exon

BRCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: BRCA1
product: BRCA1 DNA repair associated, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030541136.1
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(585468..585501,586509..586655,586853..586983,588863..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,604516..607977,609831..609916,612061..612235,617009..617208,617738..617822)
location: region:585468-617822:1
so has part: feature:585468-585501:1:exon
so has part: feature:586509-586655:1:exon
so has part: feature:586853-586983:1:exon
so has part: feature:588863-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:604516-607977:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:617009-617208:1:exon
so has part: feature:617738-617822:1:exon

position:617822:1
position: 617822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585468-585501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586509-586655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586853-586983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588863-588962:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595161-595214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:595567-595647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596195-596283:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597462-597601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598627-598732:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599715-599760:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:603005-603153:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:604516-607977:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:609831-609916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:612061-612235:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:617009-617208:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:617738-617822:1:exon

BRCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: BRCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: breast cancer type 1 susceptibility protein isoform X1
translation: MESSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPAQCPLCKTEITKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETSSTELLWREGSIIQSKGYRNRQKRIQEQENPTLEANADAQVADNMVRRSSLRNKRQKCESGKAVYIEFGSDSSDDLFEKAGGGGMGDKELFQTPPQKGECEEELKYAEKESESPYNMWPLKSDAGEILSSDILGECGVSEEDSKGIWNSIEDLEAAQVNVAEGHLKESQGISVSNSQAEQCDRTANASSLLNEDTSLFYSAEEMDAGETPFSSKNKESGLAHSSEKQLDKSKKTGNGVQHTEAVETCQPESSSLHEREPALESLWQPKTLHSNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSSSSSQDAPAGATDTEDGDSYLSDRESCISEKTDLIVNCTEVVMGCENDRSLSKSIVHNIEDKIFGKTYKREKKSNPLVHTREMPWSPKMEDVTTDVKPSSNSGASKLKRKRKTASDLQPVDFIKKRDEKDLKKHSEGVNQCLVGRNAGRKESGEGSTVVNGSPMGVKNGDSIPAELPLQEGKSILKNDTEKVTCNSTDGEPAQNTCDRKSSKKMRSSQTTRSRHSGRPVCSLQLVVDRNSSCPDLTEMQIDSYPSSEEPRKGDSEKKRVRRSRRLQLLTEKMTKETRRRGEPNERARKHASESKDSSPGLQRNVLVHVPECKDPDEQQDVLNHSIPLSDTDLKGNDLQADKTHRNPENCSDGMQTGKGLFYVKISVEDLNACSVVPDTDSQVCENQGSQSLLQPHSTNVDQAACPVQNLSENNQCAATEPKKKELCAGSPKTNRHCTENDLERFRNPKSPEAKLISELNTETEDSEIDTQYLRNMFRHSKRLSFTLHPSPVKESVTESTASETLRKSGASCVEYRHNNRDLKNEPTYVKKTVGLDEVCEREEPKTSDSAKGISGHKPGTHFSRDTEYGHVGDDGKTISQVPDQVQLFSPPRAATAKIKSRGRLQKRRQPKEKRISPEIVIESQLSQNLNKSNGSLGDRSNIEEQIFQITDLSTMNETESNQGVKAEEAENKGPVLNLQPKPVLVYPVVCQQSPAEFSCKVIEKNGYEGECKQVKSDKEQVFQIASVGVLECLISEEALEQPTEDTSDFPLLSETPDGLLCSAGDIKENISICEIDRKEISAVFVKKNQEPSLRELNSGSSSSKSKSQNFVREPRRPAWKLQSSEEESSEDEELPCFQALIFGKSAGTPLQPTEQIMSTVESSSPAEILALLNSSSGNNKAVQKTPRVSLRDMCVSPSQESECSVNLFSSQSNMSEDSTNRPQELKTPITLAPCSKEMSSSNVSREANPNGNEELTGRKTDLEGGHQLDQNVQPHLGEASGYDSEASHPGDSSGLSSQCEILTTQQKDAMQNNLKKLQQEMAVLEAVLEEHGSQGFEFQPRASELPHSRVEGTLTVGQMRPARGTALISEVDLENHKISSSKGLSADGFHVMPSDHSNTKNKELEKEGSRSPALHLSHPKSHLFKKEALEQGHWCPSLWKAKTHSKEGTVQQVDVAVLLEQEGVKQCNQYRIEPENAAEQEFGTRINSAAVLCGNERRTPNSSPLKFSERLTHFQTAESTNSVAVSWNVVNGKSTQGCKQERRAFSSASALHAGIVKENAKSPVTCRRQMSVVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKTDMELVCERTLKYFLGIAGRKWVVSYEWIVQSFKEGRILDEYNFEVRGDVINGRNHEGPKRARRSQARKLFKDFEICCYGPFTDMRTGDLEWMVELCGASVVKQPHLFTHKANSIAVIVVQPDAWLENAGYRAIQQKCTAMVTREWVLDSVACYECQEFDTYLVSQS
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(588883..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,604516..607977,609831..609916,612061..612235,613812..613944,617009..617208,617738..618060,619949..620036,620667..620744,621052..621092,625776..625859,628132..628186,630979..631052,631619..631679,632769..632875)
location: region:588883-632875:1
so has part: feature:588883-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:604516-607977:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:613812-613944:1:exon
so has part: feature:617009-617208:1:exon
so has part: feature:617738-618060:1:exon
so has part: feature:619949-620036:1:exon
so has part: feature:620667-620744:1:exon
so has part: feature:621052-621092:1:exon
so has part: feature:625776-625859:1:exon
so has part: feature:628132-628186:1:exon
so has part: feature:630979-631052:1:exon
so has part: feature:631619-631679:1:exon
so has part: feature:632769-632875:1:exon

XP_030396992.1
type: Protein
SIO_000068: ncbiprotein

position:588883:1
position: 588883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632875:1
position: 632875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588883-588962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595161-595214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595567-595647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596195-596283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597462-597601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598627-598732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599715-599760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603005-603153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604516-607977:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:609831-609916:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:612061-612235:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:613812-613944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:617009-617208:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:617738-618060:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619949-620036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:620667-620744:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:621052-621092:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:625776-625859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:628132-628186:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:630979-631052:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:631619-631679:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:632769-632875:1:exon

BRCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: BRCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: breast cancer type 1 susceptibility protein isoform X1
translation: MESSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPAQCPLCKTEITKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETSSTELLWREGSIIQSKGYRNRQKRIQEQENPTLEANADAQVADNMVRRSSLRNKRQKCESGKAVYIEFGSDSSDDLFEKAGGGGMGDKELFQTPPQKGECEEELKYAEKESESPYNMWPLKSDAGEILSSDILGECGVSEEDSKGIWNSIEDLEAAQVNVAEGHLKESQGISVSNSQAEQCDRTANASSLLNEDTSLFYSAEEMDAGETPFSSKNKESGLAHSSEKQLDKSKKTGNGVQHTEAVETCQPESSSLHEREPALESLWQPKTLHSNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSSSSSQDAPAGATDTEDGDSYLSDRESCISEKTDLIVNCTEVVMGCENDRSLSKSIVHNIEDKIFGKTYKREKKSNPLVHTREMPWSPKMEDVTTDVKPSSNSGASKLKRKRKTASDLQPVDFIKKRDEKDLKKHSEGVNQCLVGRNAGRKESGEGSTVVNGSPMGVKNGDSIPAELPLQEGKSILKNDTEKVTCNSTDGEPAQNTCDRKSSKKMRSSQTTRSRHSGRPVCSLQLVVDRNSSCPDLTEMQIDSYPSSEEPRKGDSEKKRVRRSRRLQLLTEKMTKETRRRGEPNERARKHASESKDSSPGLQRNVLVHVPECKDPDEQQDVLNHSIPLSDTDLKGNDLQADKTHRNPENCSDGMQTGKGLFYVKISVEDLNACSVVPDTDSQVCENQGSQSLLQPHSTNVDQAACPVQNLSENNQCAATEPKKKELCAGSPKTNRHCTENDLERFRNPKSPEAKLISELNTETEDSEIDTQYLRNMFRHSKRLSFTLHPSPVKESVTESTASETLRKSGASCVEYRHNNRDLKNEPTYVKKTVGLDEVCEREEPKTSDSAKGISGHKPGTHFSRDTEYGHVGDDGKTISQVPDQVQLFSPPRAATAKIKSRGRLQKRRQPKEKRISPEIVIESQLSQNLNKSNGSLGDRSNIEEQIFQITDLSTMNETESNQGVKAEEAENKGPVLNLQPKPVLVYPVVCQQSPAEFSCKVIEKNGYEGECKQVKSDKEQVFQIASVGVLECLISEEALEQPTEDTSDFPLLSETPDGLLCSAGDIKENISICEIDRKEISAVFVKKNQEPSLRELNSGSSSSKSKSQNFVREPRRPAWKLQSSEEESSEDEELPCFQALIFGKSAGTPLQPTEQIMSTVESSSPAEILALLNSSSGNNKAVQKTPRVSLRDMCVSPSQESECSVNLFSSQSNMSEDSTNRPQELKTPITLAPCSKEMSSSNVSREANPNGNEELTGRKTDLEGGHQLDQNVQPHLGEASGYDSEASHPGDSSGLSSQCEILTTQQKDAMQNNLKKLQQEMAVLEAVLEEHGSQGFEFQPRASELPHSRVEGTLTVGQMRPARGTALISEVDLENHKISSSKGLSADGFHVMPSDHSNTKNKELEKEGSRSPALHLSHPKSHLFKKEALEQGHWCPSLWKAKTHSKEGTVQQVDVAVLLEQEGVKQCNQYRIEPENAAEQEFGTRINSAAVLCGNERRTPNSSPLKFSERLTHFQTAESTNSVAVSWNVVNGKSTQGCKQERRAFSSASALHAGIVKENAKSPVTCRRQMSVVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKTDMELVCERTLKYFLGIAGRKWVVSYEWIVQSFKEGRILDEYNFEVRGDVINGRNHEGPKRARRSQARKLFKDFEICCYGPFTDMRTGDLEWMVELCGASVVKQPHLFTHKANSIAVIVVQPDAWLENAGYRAIQQKCTAMVTREWVLDSVACYECQEFDTYLVSQS
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(588883..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,604516..607977,609831..609916,612061..612235,613812..613944,617009..617208,617738..618060,619949..620036,620667..620744,621052..621092,625776..625859,628132..628186,630979..631052,631619..631679,632769..632875)
location: region:588883-632875:1
so has part: feature:588883-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:604516-607977:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:613812-613944:1:exon
so has part: feature:617009-617208:1:exon
so has part: feature:617738-618060:1:exon
so has part: feature:619949-620036:1:exon
so has part: feature:620667-620744:1:exon
so has part: feature:621052-621092:1:exon
so has part: feature:625776-625859:1:exon
so has part: feature:628132-628186:1:exon
so has part: feature:630979-631052:1:exon
so has part: feature:631619-631679:1:exon
so has part: feature:632769-632875:1:exon

XP_030396993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588883-588962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595161-595214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595567-595647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596195-596283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597462-597601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598627-598732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599715-599760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603005-603153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604516-607977:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:609831-609916:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:612061-612235:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:613812-613944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:617009-617208:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:617738-618060:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619949-620036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:620667-620744:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:621052-621092:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:625776-625859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:628132-628186:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:630979-631052:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:631619-631679:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:632769-632875:1:exon

BRCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: BRCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: breast cancer type 1 susceptibility protein isoform X1
translation: MESSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPAQCPLCKTEITKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETSSTELLWREGSIIQSKGYRNRQKRIQEQENPTLEANADAQVADNMVRRSSLRNKRQKCESGKAVYIEFGSDSSDDLFEKAGGGGMGDKELFQTPPQKGECEEELKYAEKESESPYNMWPLKSDAGEILSSDILGECGVSEEDSKGIWNSIEDLEAAQVNVAEGHLKESQGISVSNSQAEQCDRTANASSLLNEDTSLFYSAEEMDAGETPFSSKNKESGLAHSSEKQLDKSKKTGNGVQHTEAVETCQPESSSLHEREPALESLWQPKTLHSNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSSSSSQDAPAGATDTEDGDSYLSDRESCISEKTDLIVNCTEVVMGCENDRSLSKSIVHNIEDKIFGKTYKREKKSNPLVHTREMPWSPKMEDVTTDVKPSSNSGASKLKRKRKTASDLQPVDFIKKRDEKDLKKHSEGVNQCLVGRNAGRKESGEGSTVVNGSPMGVKNGDSIPAELPLQEGKSILKNDTEKVTCNSTDGEPAQNTCDRKSSKKMRSSQTTRSRHSGRPVCSLQLVVDRNSSCPDLTEMQIDSYPSSEEPRKGDSEKKRVRRSRRLQLLTEKMTKETRRRGEPNERARKHASESKDSSPGLQRNVLVHVPECKDPDEQQDVLNHSIPLSDTDLKGNDLQADKTHRNPENCSDGMQTGKGLFYVKISVEDLNACSVVPDTDSQVCENQGSQSLLQPHSTNVDQAACPVQNLSENNQCAATEPKKKELCAGSPKTNRHCTENDLERFRNPKSPEAKLISELNTETEDSEIDTQYLRNMFRHSKRLSFTLHPSPVKESVTESTASETLRKSGASCVEYRHNNRDLKNEPTYVKKTVGLDEVCEREEPKTSDSAKGISGHKPGTHFSRDTEYGHVGDDGKTISQVPDQVQLFSPPRAATAKIKSRGRLQKRRQPKEKRISPEIVIESQLSQNLNKSNGSLGDRSNIEEQIFQITDLSTMNETESNQGVKAEEAENKGPVLNLQPKPVLVYPVVCQQSPAEFSCKVIEKNGYEGECKQVKSDKEQVFQIASVGVLECLISEEALEQPTEDTSDFPLLSETPDGLLCSAGDIKENISICEIDRKEISAVFVKKNQEPSLRELNSGSSSSKSKSQNFVREPRRPAWKLQSSEEESSEDEELPCFQALIFGKSAGTPLQPTEQIMSTVESSSPAEILALLNSSSGNNKAVQKTPRVSLRDMCVSPSQESECSVNLFSSQSNMSEDSTNRPQELKTPITLAPCSKEMSSSNVSREANPNGNEELTGRKTDLEGGHQLDQNVQPHLGEASGYDSEASHPGDSSGLSSQCEILTTQQKDAMQNNLKKLQQEMAVLEAVLEEHGSQGFEFQPRASELPHSRVEGTLTVGQMRPARGTALISEVDLENHKISSSKGLSADGFHVMPSDHSNTKNKELEKEGSRSPALHLSHPKSHLFKKEALEQGHWCPSLWKAKTHSKEGTVQQVDVAVLLEQEGVKQCNQYRIEPENAAEQEFGTRINSAAVLCGNERRTPNSSPLKFSERLTHFQTAESTNSVAVSWNVVNGKSTQGCKQERRAFSSASALHAGIVKENAKSPVTCRRQMSVVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKTDMELVCERTLKYFLGIAGRKWVVSYEWIVQSFKEGRILDEYNFEVRGDVINGRNHEGPKRARRSQARKLFKDFEICCYGPFTDMRTGDLEWMVELCGASVVKQPHLFTHKANSIAVIVVQPDAWLENAGYRAIQQKCTAMVTREWVLDSVACYECQEFDTYLVSQS
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(588883..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,604516..607977,609831..609916,612061..612235,613812..613944,617009..617208,617738..618060,619949..620036,620667..620744,621052..621092,625776..625859,628132..628186,630979..631052,631619..631679,632769..632875)
location: region:588883-632875:1
so has part: feature:588883-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:604516-607977:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:613812-613944:1:exon
so has part: feature:617009-617208:1:exon
so has part: feature:617738-618060:1:exon
so has part: feature:619949-620036:1:exon
so has part: feature:620667-620744:1:exon
so has part: feature:621052-621092:1:exon
so has part: feature:625776-625859:1:exon
so has part: feature:628132-628186:1:exon
so has part: feature:630979-631052:1:exon
so has part: feature:631619-631679:1:exon
so has part: feature:632769-632875:1:exon

XP_030396994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588883-588962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595161-595214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595567-595647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596195-596283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597462-597601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598627-598732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599715-599760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603005-603153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604516-607977:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:609831-609916:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:612061-612235:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:613812-613944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:617009-617208:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:617738-618060:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619949-620036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:620667-620744:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:621052-621092:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:625776-625859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:628132-628186:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:630979-631052:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:631619-631679:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:632769-632875:1:exon

BRCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: BRCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: breast cancer type 1 susceptibility protein isoform X2
translation: MESSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPAQCPLCKTEITKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETSSTELLWREGSIIQSKGYRNRQKRIQEQENPTLEANADAQVADNMVRRSSLRNKRQKCESGKAVYIEFGSDSSDDLFEKAGGGGMGDKELFQTPPQKGECEEELKYAEKESESPYNMWPLKSDAGEILSSDILGECGVSEEDSKGIWNSIEDLEAAQVNVAEGHLKESQGISVSNSQAEQCDRTANASSLLNEDTSLFYSAEEMDAGETPFSSKNKESGLAHSSEKQLDKSKKTGNGVQHTEAVETCQPESSSLHEREPALESLWQPKTLHSNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSSSSSQDAPAGATDTEDGDSYLSDRESCISEKTDLIVNCTEVVMGCENDRSLSKSIVHNIEDKIFGKTYKREKKSNPLVHTREMPWSPKMEDVTTDVKPSSNSGASKLKRKRKTASDLQPVDFIKKRDEKDLKKHSEGVNQCLVGRNAGRKESGEGSTVVNGSPMGVKNGDSIPAELPLQEGKSILKNDTEKVTCNSTDGEPAQNTCDRKSSKKMRSSQTTRSRHSGRPVCSLQLVVDRNSSCPDLTEMQIDSYPSSEEPRKGDSEKKRVRRSRRLQLLTEKMTKETRRRGEPNERARKHASESKDSSPGLQRNVLVHVPECKDPDEQQDVLNHSIPLSDTDLKGNDLQADKTHRNPENCSDGMQTGKGLFYVKISVEDLNACSVVPDTDSQVCENQGSQSLLQPHSTNVDQAACPVQNLSENNQCAATEPKKKELCAGSPKTNRHCTENDLERFRNPKSPEAKLISELNTETEDSEIDTQYLRNMFRHSKRLSFTLHPSPVKESVTESTASETLRKSGASCVEYRHNNRDLKNEPTYVKKTVGLDEVCEREEPKTSDSAKGISGHKPGTHFSRDTEYGHVGDDGKTISQVPDQVQLFSPPRAATAKIKSRGRLQKRRQPKEKRISPEIVIESQLSQNLNKSNGSLGDRSNIEEQIFQITDLSTMNETESNQGVKAEEAENKGPVLNLQPKPVLVYPVVCQQSPAEFSCKVIEKNGYEGECKQVKSDKEQVFQIASVGVLECLISEEALEQPTEDTSDFPLLSETPDGLLCSAGDIKENISICEIDRKEISAVFVKKNQEPSLRELNSGSSSSKSKSQNFVREPRRPAWKLQSSEEESSEDEELPCFQALIFGKSAGTPLQPTEQIMSTVESSSPAEILALLNSSSGNNKAVQKTPRVSLRDMCVSPSQESECSVNLFSSQSNMSEDSTNRPQELKTPITLAPCSKEMSSSNVSREANPNGNEELTGRKTDLEGGHQLDQNVQPHLGEASGYDSEASHPGDSSGLSSQCEILTTQQKDAMQNNLKKLQQEMAVLEAVLEEHGSQGFEFQPRASELPHSRVEGTLTVGQMRPARGTALISEVDLENHKISSSKGLSADGFHVMPSDHSNTKNKELEKEGSPALHLSHPKSHLFKKEALEQGHWCPSLWKAKTHSKEGTVQQVDVAVLLEQEGVKQCNQYRIEPENAAEQEFGTRINSAAVLCGNERRTPNSSPLKFSERLTHFQTAESTNSVAVSWNVVNGKSTQGCKQERRAFSSASALHAGIVKENAKSPVTCRRQMSVVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKTDMELVCERTLKYFLGIAGRKWVVSYEWIVQSFKEGRILDEYNFEVRGDVINGRNHEGPKRARRSQARKLFKDFEICCYGPFTDMRTGDLEWMVELCGASVVKQPHLFTHKANSIAVIVVQPDAWLENAGYRAIQQKCTAMVTREWVLDSVACYECQEFDTYLVSQS
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(588883..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,604516..607977,609831..609916,612061..612235,613812..613944,617015..617208,617738..618060,619949..620036,620667..620744,621052..621092,625776..625859,628132..628186,630979..631052,631619..631679,632769..632875)
location: region:588883-632875:1
so has part: feature:588883-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:604516-607977:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:613812-613944:1:exon
so has part: feature:617015-617208:1:exon
so has part: feature:617738-618060:1:exon
so has part: feature:619949-620036:1:exon
so has part: feature:620667-620744:1:exon
so has part: feature:621052-621092:1:exon
so has part: feature:625776-625859:1:exon
so has part: feature:628132-628186:1:exon
so has part: feature:630979-631052:1:exon
so has part: feature:631619-631679:1:exon
so has part: feature:632769-632875:1:exon

XP_030396995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588883-588962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595161-595214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595567-595647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596195-596283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597462-597601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598627-598732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599715-599760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603005-603153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604516-607977:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:609831-609916:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:612061-612235:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:613812-613944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:617015-617208:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:617738-618060:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619949-620036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:620667-620744:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:621052-621092:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:625776-625859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:628132-628186:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:630979-631052:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:631619-631679:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:632769-632875:1:exon

BRCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: BRCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: breast cancer type 1 susceptibility protein isoform X4
translation: MESSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPAQCPLCKTEITKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETSSTELLWREGSIIQSKGYRNRQKRIQEQENPTLEANADAQVADNMVRRSSLRNKRQKCESGKAVYIEFGSDSSDDLFEKAGGGGMGDKELFQTPPQKGECEEELKYAEKESESPYNMWPLKSDAGEILSSDILGEASGYDSEASHPGDSSGLSSQCEILTTQQKDAMQNNLKKLQQEMAVLEAVLEEHGSQGFEFQPRASELPHSRVEGTLTVGQMRPARGTALISEVDLENHKISSSKGLSADGFHVMPSDHSNTKNKELEKEGSRSPALHLSHPKSHLFKKEALEQGHWCPSLWKAKTHSKEGTVQQVDVAVLLEQEGVKQCNQYRIEPENAAEQEFGTRINSAAVLCGNERRTPNSSPLKFSERLTHFQTAESTNSVAVSWNVVNGKSTQGCKQERRAFSSASALHAGIVKENAKSPVTCRRQMSVVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKTDMELVCERTLKYFLGIAGRKWVVSYEWIVQSFKEGRILDEYNFEVRGDVINGRNHEGPKRARRSQARKLFKDFEICCYGPFTDMRTGDLEWMVELCGASVVKQPHLFTHKANSIAVIVVQPDAWLENAGYRAIQQKCTAMVTREWVLDSVACYECQEFDTYLVSQS
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(588883..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,609831..609916,612061..612235,613812..613944,617009..617208,617738..618060,619949..620036,620667..620744,621052..621092,625776..625859,628132..628186,630979..631052,631619..631679,632769..632875)
location: region:588883-632875:1
so has part: feature:588883-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:613812-613944:1:exon
so has part: feature:617009-617208:1:exon
so has part: feature:617738-618060:1:exon
so has part: feature:619949-620036:1:exon
so has part: feature:620667-620744:1:exon
so has part: feature:621052-621092:1:exon
so has part: feature:625776-625859:1:exon
so has part: feature:628132-628186:1:exon
so has part: feature:630979-631052:1:exon
so has part: feature:631619-631679:1:exon
so has part: feature:632769-632875:1:exon

XP_030396997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588883-588962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595161-595214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595567-595647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596195-596283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597462-597601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598627-598732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599715-599760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603005-603153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:609831-609916:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:612061-612235:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613812-613944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617009-617208:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:617738-618060:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:619949-620036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:620667-620744:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:621052-621092:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:625776-625859:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:628132-628186:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:630979-631052:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:631619-631679:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:632769-632875:1:exon

BRCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: BRCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: breast cancer type 1 susceptibility protein isoform X3
translation: MESSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPAQCPLCKTEITKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETSSTELLWREGSIIQSKGYRNRQKRIQEQENPTLEANADAQVADNMVRRSSLRNKRQKCESGKAVYIEFGSDSSDDLFEKAGGGGMGDKELFQTPPQKGECEEELKYAEKESESPYNMWPLKSDAGEILSSDILGECGVSEEDSKGIWNSIEDLEAAQVNVAEGHLKESQGISVSNSQAEQCDRTANASSLLNEDTSLFYSAEEMDAGETPFSSKNKESGLAHSSEKQLDKSKKTGNGVQHTEAVETCQPESSSLHEREPALESLWQPKTLHSNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSSSSSQDAPAGATDTEDGDSYLSDRESCISEKTDLIVNCTEVVMGCENDRSLSKSIVHNIEDKIFGKTYKREKKSNPLVHTREMPWSPKMEDVTTDVKPSSNSGASKLKRKRKTASDLQPVDFIKKRDEKDLKKHSEGVNQCLVGRNAGRKESGEGSTVVNGSPMGVKNGDSIPAELPLQEGKSILKNDTEKVTCNSTDGEPAQNTCDRKSSKKMRSSQTTRSRHSGRPVCSLQLVVDRNSSCPDLTEMQIDSYPSSEEPRKGDSEKKRVRRSRRLQLLTEKMTKETRRRGEPNERARKHASESKDSSPGLQRNVLVHVPECKDPDEQQDVLNHSIPLSDTDLKGNDLQADKTHRNPENCSDGMQTGKGLFYVKISVEDLNACSVVPDTDSQVCENQGSQSLLQPHSTNVDQAACPVQNLSENNQCAATEPKKKELCAGSPKTNRHCTENDLERFRNPKSPEAKLISELNTETEDSEIDTQYLRNMFRHSKRLSFTLHPSPVKESVTESTASETLRKSGASCVEYRHNNRDLKNEPTYVKKTVGLDEVCEREEPKTSDSAKGISGHKPGTHFSRDTEYGHVGDDGKTISQVPDQVQLFSPPRAATAKIKSRGRLQKRRQPKEKRISPEIVIESQLSQNLNKSNGSLGDRSNIEEQIFQITDLSTMNETESNQGVKAEEAENKGPVLNLQPKPVLVYPVVCQQSPAEFSCKVIEKNGYEGECKQVKSDKEQVFQIASVGVLECLISEEALEQPTEDTSDFPLLSETPDGLLCSAGDIKENISICEIDRKEISAVFVKKNQEPSLRELNSGSSSSKSKSQNFVREPRRPAWKLQSSEEESSEDEELPCFQALIFGKSAGTPLQPTEQIMSTVESSSPAEILALLNSSSGNNKAVQKTPRVSLRDMCVSPSQESECSVNLFSSQSNMSEDSTNRPQELKTPITLAPCSKEMSSSNVSREANPNGNEELTGRKTDLEGGHQLDQNVQPHLGEASGYDSEASHPGDSSGLSSQCEILTTQQKDAMQNNLKKLQQEMAVLEAVLEEHGSQGFEFQPRASELPHSRVEGTLTVGQMRPARVLGRLLYTFPILNPIYLKKKLWSKATGAQAFGKPKLTPRREQFSRLMWQCCWNKRE
SIO_010081: BRCA1
subclass of: SO_0000673
so part of: BRCA1
location: join(588883..588962,595161..595214,595567..595647,596195..596283,597462..597601,598627..598732,599715..599760,603005..603153,604516..607977,609831..609916,612061..612235,617009..617178)
location: region:588883-617178:1
so has part: feature:588883-588962:1:exon
so has part: feature:595161-595214:1:exon
so has part: feature:595567-595647:1:exon
so has part: feature:596195-596283:1:exon
so has part: feature:597462-597601:1:exon
so has part: feature:598627-598732:1:exon
so has part: feature:599715-599760:1:exon
so has part: feature:603005-603153:1:exon
so has part: feature:604516-607977:1:exon
so has part: feature:609831-609916:1:exon
so has part: feature:612061-612235:1:exon
so has part: feature:617009-617178:1:exon

XP_030396996.1
type: Protein
SIO_000068: ncbiprotein

position:617178:1
position: 617178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588883-588962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595161-595214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595567-595647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596195-596283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597462-597601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598627-598732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599715-599760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603005-603153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604516-607977:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:609831-609916:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:612061-612235:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617009-617178:1:exon

RND2
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: RND2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(722075..751109)
location: region:722075-751109:-1
so has part: feature:722075-751109:-1:exon
subclass of: SO_0000010

115638966
type: Gene
SIO_000068: ncbigene

position:722075:-1
position: 722075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751109:-1
position: 751109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722075-751109:-1:exon

RND2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RND2
product: Rho family GTPase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030541168.1
SIO_010081: RND2
subclass of: SO_0000673
so part of: RND2
location: complement(join(722075..722624,725665..725799,731814..731923,750022..750109,750960..751109))
location: region:722075-751109:-1
so has part: feature:750960-751109:-1:exon
so has part: feature:750022-750109:-1:exon
so has part: feature:731814-731923:-1:exon
so has part: feature:725665-725799:-1:exon
so has part: feature:722075-722624:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:750960-751109:-1:exon

position:750960:-1
position: 750960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:750022-750109:-1:exon

position:750022:-1
position: 750022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750109:-1
position: 750109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:731814-731923:-1:exon

position:731814:-1
position: 731814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731923:-1
position: 731923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:725665-725799:-1:exon

position:725665:-1
position: 725665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725799:-1
position: 725799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:722075-722624:-1:exon

position:722624:-1
position: 722624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RND2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RND2
product: Rho family GTPase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030541169.1
SIO_010081: RND2
subclass of: SO_0000673
so part of: RND2
location: complement(join(722075..722624,725665..725799,731814..731923,733899..734096))
location: region:722075-734096:-1
so has part: feature:733899-734096:-1:exon
so has part: feature:731814-731923:-1:exon
so has part: feature:725665-725799:-1:exon
so has part: feature:722075-722624:-1:exon

position:734096:-1
position: 734096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733899-734096:-1:exon

position:733899:-1
position: 733899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731814-731923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725665-725799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722075-722624:-1:exon

RND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RND2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoN isoform X1
translation: MESGARCKIVVVGDTQCGKTALLHVFAKDCYPENYVPTVFENYTASFEIDKQRIELNMWDTSGSAYYDNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKIVLVGCKLDMRTDLNTLRELSKQRLIPVTHEQGSTLARQMGAVAYVECSSKVSENSVRDVFHVTTLASVNRMHKNLKRSNSKRGLKRASQMPSRTDLLNDTEIRKDRAKSCSIM
SIO_010081: RND2
subclass of: SO_0000673
so part of: RND2
location: complement(join(722376..722624,725665..725799,731814..731923,750022..750109,750960..751058))
location: region:722376-751058:-1
so has part: feature:750960-751058:-1:exon
so has part: feature:750022-750109:-1:exon
so has part: feature:731814-731923:-1:exon
so has part: feature:725665-725799:-1:exon
so has part: feature:722376-722624:-1:exon

XP_030397028.1
type: Protein
SIO_000068: ncbiprotein

position:722376:-1
position: 722376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751058:-1
position: 751058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750960-751058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750022-750109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:731814-731923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725665-725799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722376-722624:-1:exon

RND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RND2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoN isoform X2
translation: MHRGAVRSCSLYTIPSPAPSRPIAAALALGSAYYDNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKIVLVGCKLDMRTDLNTLRELSKQRLIPVTHEQGSTLARQMGAVAYVECSSKVSENSVRDVFHVTTLASVNRMHKNLKRSNSKRGLKRASQMPSRTDLLNDTEIRKDRAKSCSIM
SIO_010081: RND2
subclass of: SO_0000673
so part of: RND2
location: complement(join(722376..722624,725665..725799,731814..731923,733899..733986))
location: region:722376-733986:-1
so has part: feature:733899-733986:-1:exon
so has part: feature:731814-731923:-1:exon
so has part: feature:725665-725799:-1:exon
so has part: feature:722376-722624:-1:exon

XP_030397029.1
type: Protein
SIO_000068: ncbiprotein

position:733986:-1
position: 733986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733899-733986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731814-731923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725665-725799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722376-722624:-1:exon

VAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: VAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 775212..801614
location: region:775212-801614:1
so has part: feature:775212-801614:1:exon
subclass of: SO_0000010

115639217
type: Gene
SIO_000068: ncbigene

position:775212:1
position: 775212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801614:1
position: 801614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775212-801614:1:exon

VAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: VAT1
product: vesicle amine transport 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030541702.1
SIO_010081: VAT1
subclass of: SO_0000673
so part of: VAT1
location: join(775212..775294,776169..776832,788330..788537,789036..789206,789326..789415,790538..790779,796769..801614)
location: region:775212-801614:1
so has part: feature:775212-775294:1:exon
so has part: feature:776169-776832:1:exon
so has part: feature:788330-788537:1:exon
so has part: feature:789036-789206:1:exon
so has part: feature:789326-789415:1:exon
so has part: feature:790538-790779:1:exon
so has part: feature:796769-801614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:775212-775294:1:exon

position:775294:1
position: 775294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:776169-776832:1:exon

position:776169:1
position: 776169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776832:1
position: 776832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:788330-788537:1:exon

position:788330:1
position: 788330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788537:1
position: 788537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:789036-789206:1:exon

position:789036:1
position: 789036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789206:1
position: 789206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:789326-789415:1:exon

position:789326:1
position: 789326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789415:1
position: 789415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:790538-790779:1:exon

position:790538:1
position: 790538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790779:1
position: 790779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:796769-801614:1:exon

position:796769:1
position: 796769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: VAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptic vesicle membrane protein VAT-1 homolog
translation: MIQVSLYSDCKKLGLDDGVDHVIISLIGPHRSPSVGKRTQESRLQSLRETPHPAEGAAGSAPCSAFQVFPYPSHAPDSGSGFPAGPSSAQLFAAVRPPLPGVLRQPAPSAVPGPAPQPGRSEPGPSGPYPSPAMSGEEAAAPPAPADQAPPAEQQAAGGGDAPPAEPQYRALVLSGFGGYEKVKVQVRRGEPSPRPGELAVRVRACGLNFADLLARQGLYERLPPPPVSPGMECAGTVLALGEGVTGRQVGDKVMVLARAGLWQEVVTVPANQTYLMPDGMSFEEAAAFLVNYITAYMILFDFGNLRPHQSVLIHMAAGGVGTAAVQLCKTVENVTIFGTASASKHDALRESGVAHPIDYRSMDYVEEVRKISPKGVDIVLDPLGGSDTTKAFNLLKPMGKLITYGVANLLTGQKKNLMAMAKTWWNQFSINALQLLHLNKAVCGYHLGYMDEEFELIGGVVAKLVSLYSQGKIKPKIDSVWPFEQVADAMRQMQEKKNVGKVILVPELPKEESKKEEN
SIO_010081: VAT1
subclass of: SO_0000673
so part of: VAT1
location: join(775212..775294,776169..776832,788330..788537,789036..789206,789326..789415,790538..790779,796769..796870)
location: region:775212-796870:1
so has part: feature:775212-775294:1:exon
so has part: feature:776169-776832:1:exon
so has part: feature:788330-788537:1:exon
so has part: feature:789036-789206:1:exon
so has part: feature:789326-789415:1:exon
so has part: feature:790538-790779:1:exon
so has part: feature:796769-796870:1:exon

XP_030397562.1
type: Protein
SIO_000068: ncbiprotein

position:796870:1
position: 796870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775212-775294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:776169-776832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788330-788537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:789036-789206:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:789326-789415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:790538-790779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:796769-796870:1:exon

LOC115638954
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(802989..814767)
location: region:802989-814767:-1
so has part: feature:802989-814767:-1:exon
subclass of: SO_0000010

115638954
type: Gene
SIO_000068: ncbigene

position:802989:-1
position: 802989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814767:-1
position: 814767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802989-814767:-1:exon

LOC115638954
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638954
product: uncharacterized LOC115638954
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030541143.1
SIO_010081: LOC115638954
subclass of: SO_0000673
so part of: LOC115638954
location: complement(join(802989..803811,804480..804688,806877..809759,810974..811077,811374..811565,814712..814767))
location: region:802989-814767:-1
so has part: feature:814712-814767:-1:exon
so has part: feature:811374-811565:-1:exon
so has part: feature:810974-811077:-1:exon
so has part: feature:806877-809759:-1:exon
so has part: feature:804480-804688:-1:exon
so has part: feature:802989-803811:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:814712-814767:-1:exon

position:814712:-1
position: 814712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:811374-811565:-1:exon

position:811374:-1
position: 811374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811565:-1
position: 811565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:810974-811077:-1:exon

position:810974:-1
position: 810974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811077:-1
position: 811077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:806877-809759:-1:exon

position:806877:-1
position: 806877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809759:-1
position: 809759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:804480-804688:-1:exon

position:804480:-1
position: 804480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804688:-1
position: 804688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:802989-803811:-1:exon

position:803811:-1
position: 803811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638954
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115638954
translation: MAGRTVRVGGIPTDLPPERVADKLTIHFLRARNGGGEIADIAFVAGPPACALVTFEESGVAQRVLEVENHVLLVGGKTYPLTVTAHAAELSPDKIFVRVCMIIDYGRLLDGKTLLRSLRKRYGAVQFSFDPKETLCTVKGPFTELQAFSRELLRSQQAGEAPPEGVSPPATGTGMSASQQRPGSPLPESRVETQPSPGQVHEEASEPPLRRDPVDGEAVEQLEDFSLVMDADIYLYMQKFCSDRYQRVLHQHEVDVVDVSSDGIAILYLQASSKNTGDISSVVQARLALLHLYQQLEACLRKEKISKGELSSDMPSQRALLEDLQKLCPLLLCHEDERHLYLIGNLVDVSQAKQYIQDRNPGRTATADLRPSNASLATYTAALRGGDARLGTVDPSPPRLSPGKFEFKGEHKLAANFSFLKHDAALSSAWPSLDRSSLFTEQMQLPGSWLKEVGAPGQSDPAPPSGQHHLPVSAALTGPAAEAQQRELKDWDRRKGAPLLLRPKTLSLFVGGKESSTLQSLGGWKSPGPVKPQSISSVSSAFKSLSLFDTTGTCSALDSKPPESSAPLRRSNSFSIPKSKASDTPRDPSRAASGVSEEISMDPVHWAYLKEIHGSAIGGLCREGGIVLAEHSSKGCTVLTLTAEDRTKLLQARWKMEALCQMVCPALVCQSLSYSELDVEGPSDEALNELCSLLKGCSAQVRVSKDRYKLHLMCPKETLLRVNEAFQRFSARRRSALTLSSPSPGLEGSPAEEYPSPTQQVKTQYPALAAEYRHGQEGLQQLEVSSTAGLSDVSESTPQLNGADTMRLSGPRWNGTRTSSYQQVLGQEDPSYPSDSQDVSGSGLLDASLAGWQSLSPGDPQELQKGERPVGEPETARIKRVLPDRFQFARDKSRGGPSEAGGSTRPPAHAADGAPQSLPIWLSSSGTVLPARAAEQASKPGQGDSAGDGDSQETAISELERRGPSPGQGAHEHKLGKCDACQSLCTATCRAQCGHSLCQTCFAAEDAHPACCSSPKSARTIKGTFKVVTLSQSLPGYFRDPTLKITYDIPDGVQEAGDPQPGRPYRGGRFHAFLPDNREGKKTSQLLQKAFEQGLTFQIQSCDGEERVMWHLIPHKTSFDKGKARNGYPDSQYLHQVSTLLRNLGIE
SIO_010081: LOC115638954
subclass of: SO_0000673
so part of: LOC115638954
location: complement(join(803742..803811,804480..804688,806877..809759,810974..811077,811374..811551))
location: region:803742-811551:-1
so has part: feature:811374-811551:-1:exon
so has part: feature:810974-811077:-1:exon
so has part: feature:806877-809759:-1:exon
so has part: feature:804480-804688:-1:exon
so has part: feature:803742-803811:-1:exon

XP_030397003.1
type: Protein
SIO_000068: ncbiprotein

position:803742:-1
position: 803742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811551:-1
position: 811551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811374-811551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810974-811077:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806877-809759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:804480-804688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803742-803811:-1:exon

IFI35
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: IFI35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(816051..825503)
location: region:816051-825503:-1
so has part: feature:816051-825503:-1:exon
subclass of: SO_0000010

115638960
type: Gene
SIO_000068: ncbigene

position:816051:-1
position: 816051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825503:-1
position: 825503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816051-825503:-1:exon

IFI35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: IFI35
product: interferon induced protein 35, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030541157.1
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816051..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823450..823608,823899..823994,824571..824616,825416..825503))
location: region:816051-825503:-1
so has part: feature:825416-825503:-1:exon
so has part: feature:824571-824616:-1:exon
so has part: feature:823899-823994:-1:exon
so has part: feature:823450-823608:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816051-816369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825416-825503:-1:exon

position:825416:-1
position: 825416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:824571-824616:-1:exon

position:824571:-1
position: 824571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824616:-1
position: 824616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823899-823994:-1:exon

position:823899:-1
position: 823899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823994:-1
position: 823994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:823450-823608:-1:exon

position:823450:-1
position: 823450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823608:-1
position: 823608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:822209-822313:-1:exon

position:822209:-1
position: 822209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822313:-1
position: 822313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:821515-821659:-1:exon

position:821515:-1
position: 821515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821659:-1
position: 821659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:821034-821155:-1:exon

position:821034:-1
position: 821034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821155:-1
position: 821155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:819944-820133:-1:exon

position:819944:-1
position: 819944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820133:-1
position: 820133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:819537-819643:-1:exon

position:819537:-1
position: 819537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819643:-1
position: 819643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:816051-816369:-1:exon

position:816369:-1
position: 816369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IFI35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: IFI35
product: interferon induced protein 35, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_030541152.1
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816051..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823450..823608,823899..823994,824586..824617,825416..825492))
location: region:816051-825492:-1
so has part: feature:825416-825492:-1:exon
so has part: feature:824586-824617:-1:exon
so has part: feature:823899-823994:-1:exon
so has part: feature:823450-823608:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816051-816369:-1:exon

position:825492:-1
position: 825492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825416-825492:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:824586-824617:-1:exon

position:824586:-1
position: 824586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824617:-1
position: 824617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823899-823994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:823450-823608:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822209-822313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821515-821659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821034-821155:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819944-820133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:819537-819643:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:816051-816369:-1:exon

IFI35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: IFI35
product: interferon induced protein 35, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030541156.1
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816051..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823899..823994,824571..824617,825416..825466))
location: region:816051-825466:-1
so has part: feature:825416-825466:-1:exon
so has part: feature:824571-824617:-1:exon
so has part: feature:823899-823994:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816051-816369:-1:exon

position:825466:-1
position: 825466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825416-825466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:824571-824617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823899-823994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822209-822313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821515-821659:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821034-821155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819944-820133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819537-819643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:816051-816369:-1:exon

IFI35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: IFI35
product: interferon induced protein 35, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030541153.1
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816051..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823450..823608,823899..823994,824586..824617,825412..825429))
location: region:816051-825429:-1
so has part: feature:825412-825429:-1:exon
so has part: feature:824586-824617:-1:exon
so has part: feature:823899-823994:-1:exon
so has part: feature:823450-823608:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816051-816369:-1:exon

position:825429:-1
position: 825429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825412-825429:-1:exon

position:825412:-1
position: 825412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:824586-824617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823899-823994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:823450-823608:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822209-822313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821515-821659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821034-821155:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819944-820133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:819537-819643:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:816051-816369:-1:exon

IFI35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: IFI35
product: interferon induced protein 35, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030541154.1
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816051..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823450..823608,823899..823994,824586..824617,824845..825361))
location: region:816051-825361:-1
so has part: feature:824845-825361:-1:exon
so has part: feature:824586-824617:-1:exon
so has part: feature:823899-823994:-1:exon
so has part: feature:823450-823608:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816051-816369:-1:exon

position:825361:-1
position: 825361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824845-825361:-1:exon

position:824845:-1
position: 824845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:824586-824617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823899-823994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:823450-823608:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822209-822313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821515-821659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821034-821155:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819944-820133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:819537-819643:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:816051-816369:-1:exon

IFI35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: IFI35
product: interferon induced protein 35, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030541155.1
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816051..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823450..823608,823899..824001,824586..824616))
location: region:816051-824616:-1
so has part: feature:824586-824616:-1:exon
so has part: feature:823899-824001:-1:exon
so has part: feature:823450-823608:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816051-816369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824586-824616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823899-824001:-1:exon

position:824001:-1
position: 824001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823450-823608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822209-822313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821515-821659:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821034-821155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819944-820133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819537-819643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:816051-816369:-1:exon

IFI35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: IFI35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced 35 kDa protein isoform X1
translation: MTDSEEESFVRLPDELTLENSSPKMTPELLQQEIEKYKERCQALEQDQLELGMAKEAAEQKRQFVQREAEHLRGKLEKEKSPSRELEPSYQELCLAKAERDKLLQEKQKLEKELEERRVAWEEQAKAPPCLPDREMLFKGHVTEAEDVNALVVAPRIQRALPGGSALLTFEEPEVAQRILEIKQHEVKLDESAGCEGRVRVQAEPMELLLPSALEIELKLSDRCILLSSLPCLDLSEEQLLDKLELFFSKKKNGGGEVEQRELLSDSGHVVLTFVQDGVAEQLMKKGRIQVPIGKQTYELKVTPYMSGQITDLQVRPSVCAKTVLLSGIPDILEEEAMRDALEIHFQKPSRGGGEVDALGYVPVGGQALAVFEEDTD
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816178..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823450..823608,823899..823994,824586..824603))
location: region:816178-824603:-1
so has part: feature:824586-824603:-1:exon
so has part: feature:823899-823994:-1:exon
so has part: feature:823450-823608:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816178-816369:-1:exon

XP_030397012.1
type: Protein
SIO_000068: ncbiprotein

position:816178:-1
position: 816178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824603:-1
position: 824603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824586-824603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823899-823994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823450-823608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822209-822313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821515-821659:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821034-821155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819944-820133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819537-819643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:816178-816369:-1:exon

IFI35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: IFI35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced 35 kDa protein isoform X1
translation: MTDSEEESFVRLPDELTLENSSPKMTPELLQQEIEKYKERCQALEQDQLELGMAKEAAEQKRQFVQREAEHLRGKLEKEKSPSRELEPSYQELCLAKAERDKLLQEKQKLEKELEERRVAWEEQAKAPPCLPDREMLFKGHVTEAEDVNALVVAPRIQRALPGGSALLTFEEPEVAQRILEIKQHEVKLDESAGCEGRVRVQAEPMELLLPSALEIELKLSDRCILLSSLPCLDLSEEQLLDKLELFFSKKKNGGGEVEQRELLSDSGHVVLTFVQDGVAEQLMKKGRIQVPIGKQTYELKVTPYMSGQITDLQVRPSVCAKTVLLSGIPDILEEEAMRDALEIHFQKPSRGGGEVDALGYVPVGGQALAVFEEDTD
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816178..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823450..823608,823899..823994,824586..824603))
location: region:816178-824603:-1
so has part: feature:824586-824603:-1:exon
so has part: feature:823899-823994:-1:exon
so has part: feature:823450-823608:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816178-816369:-1:exon

XP_030397013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:824586-824603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823899-823994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823450-823608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822209-822313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821515-821659:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821034-821155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819944-820133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819537-819643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:816178-816369:-1:exon

IFI35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: IFI35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced 35 kDa protein isoform X1
translation: MTDSEEESFVRLPDELTLENSSPKMTPELLQQEIEKYKERCQALEQDQLELGMAKEAAEQKRQFVQREAEHLRGKLEKEKSPSRELEPSYQELCLAKAERDKLLQEKQKLEKELEERRVAWEEQAKAPPCLPDREMLFKGHVTEAEDVNALVVAPRIQRALPGGSALLTFEEPEVAQRILEIKQHEVKLDESAGCEGRVRVQAEPMELLLPSALEIELKLSDRCILLSSLPCLDLSEEQLLDKLELFFSKKKNGGGEVEQRELLSDSGHVVLTFVQDGVAEQLMKKGRIQVPIGKQTYELKVTPYMSGQITDLQVRPSVCAKTVLLSGIPDILEEEAMRDALEIHFQKPSRGGGEVDALGYVPVGGQALAVFEEDTD
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816178..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823450..823608,823899..823994,824586..824603))
location: region:816178-824603:-1
so has part: feature:824586-824603:-1:exon
so has part: feature:823899-823994:-1:exon
so has part: feature:823450-823608:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816178-816369:-1:exon

XP_030397014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:824586-824603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823899-823994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823450-823608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822209-822313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821515-821659:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821034-821155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819944-820133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819537-819643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:816178-816369:-1:exon

IFI35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: IFI35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced 35 kDa protein isoform X3
translation: MTDSEEVTGHQESFVRLPDELTLENSSPKMTPELLQQEIEKYKELCLAKAERDKLLQEKQKLEKELEERRVAWEEQAKAPPCLPDREMLFKGHVTEAEDVNALVVAPRIQRALPGGSALLTFEEPEVAQRILEIKQHEVKLDESAGCEGRVRVQAEPMELLLPSALEIELKLSDRCILLSSLPCLDLSEEQLLDKLELFFSKKKNGGGEVEQRELLSDSGHVVLTFVQDGVAEQLMKKGRIQVPIGKQTYELKVTPYMSGQITDLQVRPSVCAKTVLLSGIPDILEEEAMRDALEIHFQKPSRGGGEVDALGYVPVGGQALAVFEEDTD
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816178..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823899..823994,824571..824603))
location: region:816178-824603:-1
so has part: feature:824571-824603:-1:exon
so has part: feature:823899-823994:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816178-816369:-1:exon

XP_030397016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:824571-824603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823899-823994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822209-822313:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:821515-821659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821034-821155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819944-820133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819537-819643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:816178-816369:-1:exon

IFI35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: IFI35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced 35 kDa protein isoform X4
translation: MTDSEEVTGHQESFVRLPDELTLENSSPKMTPELLQQEIEKYKERCQALEQDQLELGMAKEAAEQKRQFVQREAEHLRGKLEKEKSPSRELEPSYQELCLAKAERDKLLQEKQKLEKELEERRVAWEEQAKAPPCLPDREMLFKGHVTEAEDVNALVVAPRIQRALPGGSALLTFEEPEVAQRILEIKQHEVKLDESAGCEGRVRVQAEPMELLLPSALEIELKLSDRCILLSSLPCLDLSEEQLLDKLELFFSKKKNGGGEVEQRELLSDSGHVVLTFVQDGVAEQLMKKGRIQVPIGKQTYELKVTPYMSGQITDLQVRPSVCAKTVLLSGIPDILEEEAMRDALEIHFQKPSRGGGEVDALGYVPVGGQALAVFEEDTD
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816178..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823450..823608,823899..823994,824571..824603))
location: region:816178-824603:-1
so has part: feature:824571-824603:-1:exon
so has part: feature:823899-823994:-1:exon
so has part: feature:823450-823608:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816178-816369:-1:exon

XP_030397017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:824571-824603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823899-823994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823450-823608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822209-822313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821515-821659:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821034-821155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819944-820133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819537-819643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:816178-816369:-1:exon

IFI35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: IFI35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced 35 kDa protein isoform X2
translation: MTPELLQQEIEKYKERCQALEQDQLELGMAKEAAEQKRQFVQREAEHLRGKLEKEKSPSRELEPSYQELCLAKAERDKLLQEKQKLEKELEERRVAWEEQAKAPPCLPDREMLFKGHVTEAEDVNALVVAPRIQRALPGGSALLTFEEPEVAQRILEIKQHEVKLDESAGCEGRVRVQAEPMELLLPSALEIELKLSDRCILLSSLPCLDLSEEQLLDKLELFFSKKKNGGGEVEQRELLSDSGHVVLTFVQDGVAEQLMKKGRIQVPIGKQTYELKVTPYMSGQITDLQVRPSVCAKTVLLSGIPDILEEEAMRDALEIHFQKPSRGGGEVDALGYVPVGGQALAVFEEDTD
SIO_010081: IFI35
subclass of: SO_0000673
so part of: IFI35
location: complement(join(816178..816369,819537..819643,819944..820133,821034..821155,821515..821659,822209..822313,823450..823608,823899..823940))
location: region:816178-823940:-1
so has part: feature:823899-823940:-1:exon
so has part: feature:823450-823608:-1:exon
so has part: feature:822209-822313:-1:exon
so has part: feature:821515-821659:-1:exon
so has part: feature:821034-821155:-1:exon
so has part: feature:819944-820133:-1:exon
so has part: feature:819537-819643:-1:exon
so has part: feature:816178-816369:-1:exon

XP_030397015.1
type: Protein
SIO_000068: ncbiprotein

position:823940:-1
position: 823940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823899-823940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823450-823608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822209-822313:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:821515-821659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821034-821155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819944-820133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819537-819643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:816178-816369:-1:exon

LOC115638972
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 817233..818046
location: region:817233-818046:1
so has part: feature:817233-818046:1:exon
subclass of: SO_0000011

115638972
type: Gene
SIO_000068: ncbigene

position:817233:1
position: 817233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818046:1
position: 818046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817233-818046:1:exon

LOC115638972
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638972
product: uncharacterized LOC115638972, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003997550.1
SIO_010081: LOC115638972
subclass of: SO_0000673
so part of: LOC115638972
location: join(817233..817306,817347..817469,817511..818046)
location: region:817233-818046:1
so has part: feature:817233-817306:1:exon
so has part: feature:817347-817469:1:exon
so has part: feature:817511-818046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:817233-817306:1:exon

position:817306:1
position: 817306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:817347-817469:1:exon

position:817347:1
position: 817347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817469:1
position: 817469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:817511-818046:1:exon

position:817511:1
position: 817511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115638972
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638972
product: uncharacterized LOC115638972, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003997551.1
SIO_010081: LOC115638972
subclass of: SO_0000673
so part of: LOC115638972
location: join(817233..817306,817347..817469,817511..817739,817780..818046)
location: region:817233-818046:1
so has part: feature:817233-817306:1:exon
so has part: feature:817347-817469:1:exon
so has part: feature:817511-817739:1:exon
so has part: feature:817780-818046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:817233-817306:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:817347-817469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:817511-817739:1:exon

position:817739:1
position: 817739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:817780-818046:1:exon

position:817780:1
position: 817780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL27
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: RPL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(826685..831421)
location: region:826685-831421:-1
so has part: feature:826685-831421:-1:exon
subclass of: SO_0000010

115638969
type: Gene
SIO_000068: ncbigene

position:826685:-1
position: 826685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831421:-1
position: 831421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826685-831421:-1:exon

RPL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RPL27
product: ribosomal protein L27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_030541172.1
SIO_010081: RPL27
subclass of: SO_0000673
so part of: RPL27
location: complement(join(826685..826774,828412..828522,829342..829511,830802..830884,831324..831421))
location: region:826685-831421:-1
so has part: feature:831324-831421:-1:exon
so has part: feature:830802-830884:-1:exon
so has part: feature:829342-829511:-1:exon
so has part: feature:828412-828522:-1:exon
so has part: feature:826685-826774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:831324-831421:-1:exon

position:831324:-1
position: 831324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:830802-830884:-1:exon

position:830802:-1
position: 830802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830884:-1
position: 830884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:829342-829511:-1:exon

position:829342:-1
position: 829342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829511:-1
position: 829511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:828412-828522:-1:exon

position:828412:-1
position: 828412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828522:-1
position: 828522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:826685-826774:-1:exon

position:826774:-1
position: 826774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RPL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L27
translation: MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF
SIO_010081: RPL27
subclass of: SO_0000673
so part of: RPL27
location: complement(join(826726..826774,828412..828522,829342..829511,830802..830882))
location: region:826726-830882:-1
so has part: feature:830802-830882:-1:exon
so has part: feature:829342-829511:-1:exon
so has part: feature:828412-828522:-1:exon
so has part: feature:826726-826774:-1:exon

XP_030397032.1
type: Protein
SIO_000068: ncbiprotein

position:826726:-1
position: 826726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830882:-1
position: 830882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830802-830882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829342-829511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828412-828522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:826726-826774:-1:exon

RUNDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: RUNDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(832221..840980)
location: region:832221-840980:-1
so has part: feature:832221-840980:-1:exon
subclass of: SO_0000010

115638958
type: Gene
SIO_000068: ncbigene

position:832221:-1
position: 832221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840980:-1
position: 840980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832221-840980:-1:exon

RUNDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RUNDC1
product: RUN domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030541149.1
SIO_010081: RUNDC1
subclass of: SO_0000673
so part of: RUNDC1
location: complement(join(832221..835582,836561..836674,837015..837213,837505..837663,840645..840980))
location: region:832221-840980:-1
so has part: feature:840645-840980:-1:exon
so has part: feature:837505-837663:-1:exon
so has part: feature:837015-837213:-1:exon
so has part: feature:836561-836674:-1:exon
so has part: feature:832221-835582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840645-840980:-1:exon

position:840645:-1
position: 840645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:837505-837663:-1:exon

position:837505:-1
position: 837505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837663:-1
position: 837663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:837015-837213:-1:exon

position:837015:-1
position: 837015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837213:-1
position: 837213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:836561-836674:-1:exon

position:836561:-1
position: 836561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836674:-1
position: 836674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:832221-835582:-1:exon

position:835582:-1
position: 835582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RUNDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RUNDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN domain-containing protein 1
translation: MEAEGGALGPGERWAPVGAVAEAEADEAEAGDPGGPGSPGGSPRSLPRLRAERRRLHGALLALVSHFAQVQFRLRQVARAGPAEQQRLLRDLEDFAFRGCPAALGDGLGEAPGGRENQERIEARKEKQRELIMQLKTQLDDLETFAYQEGSYDSLPQSMVMERQRVIIEELIKKLDMNLNEDIASLSPEELRQQVDVAVAQIVNPARVKEQLVEQLKTQIRDLEMFISFIQDEVGSPGQVEDGHCECSGRKHGSGPYKPNARLPPRNNRVNPEDARKMRETGLHLMRRMLAVLQIFAVSQFGCATGQIPRTLWQKDQANKDYSPLIKKLELSVDQVRQLALKYQHQDHVLSYSSMQDVSLGARDELTLAVRKELTIAIRDLMAHGLYASSQGMSLVLAPIACLIPAFTSSPQTMHPWELFVKYYNTKNGRAFVESPARKLSQSFALPVTGGITVTPKQSLLTAIHTVLSEHDPFKRSADSELKALVCMALNEQRLVSWVNLICKSGALIQSHYQPWSYMANTGFESALNILSRLSNLKFSLPVDLAVRQLKNIRDAF
SIO_010081: RUNDC1
subclass of: SO_0000673
so part of: RUNDC1
location: complement(join(834717..835582,836561..836674,837015..837213,837505..837663,840645..840980))
location: region:834717-840980:-1
so has part: feature:840645-840980:-1:exon
so has part: feature:837505-837663:-1:exon
so has part: feature:837015-837213:-1:exon
so has part: feature:836561-836674:-1:exon
so has part: feature:834717-835582:-1:exon

XP_030397009.1
type: Protein
SIO_000068: ncbiprotein

position:834717:-1
position: 834717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840645-840980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:837505-837663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:837015-837213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836561-836674:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834717-835582:-1:exon

PTGES3L
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: PTGES3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 845892..853682
location: region:845892-853682:1
so has part: feature:845892-853682:1:exon
subclass of: SO_0000010

115638967
type: Gene
SIO_000068: ncbigene

position:845892:1
position: 845892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853682:1
position: 853682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845892-853682:1:exon

PTGES3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PTGES3L
product: prostaglandin E synthase 3 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030541170.1
SIO_010081: PTGES3L
subclass of: SO_0000673
so part of: PTGES3L
location: join(845892..845960,848626..848739,848892..848958,849620..849718,850484..850573,851984..852037,852840..852868,853306..853682)
location: region:845892-853682:1
so has part: feature:845892-845960:1:exon
so has part: feature:848626-848739:1:exon
so has part: feature:848892-848958:1:exon
so has part: feature:849620-849718:1:exon
so has part: feature:850484-850573:1:exon
so has part: feature:851984-852037:1:exon
so has part: feature:852840-852868:1:exon
so has part: feature:853306-853682:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:845892-845960:1:exon

position:845960:1
position: 845960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:848626-848739:1:exon

position:848626:1
position: 848626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848739:1
position: 848739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:848892-848958:1:exon

position:848892:1
position: 848892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848958:1
position: 848958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:849620-849718:1:exon

position:849620:1
position: 849620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849718:1
position: 849718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:850484-850573:1:exon

position:850484:1
position: 850484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850573:1
position: 850573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:851984-852037:1:exon

position:851984:1
position: 851984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852037:1
position: 852037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:852840-852868:1:exon

position:852840:1
position: 852840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852868:1
position: 852868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:853306-853682:1:exon

position:853306:1
position: 853306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTGES3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PTGES3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein PTGES3L
translation: MARQSAKTLWYDRPWYIFLEFCVEDSTDVKVDIEDHRVVFSCKNADGVEMYNEINLYARVNSKDSQQKRSDRSITCFVRKWKEKVAWPRLTKENIKPVWLFVDFDNWRDWEGDEEAEMAMTEQYAELLQKVTVKGTPPAMDDLDDEI
SIO_010081: PTGES3L
subclass of: SO_0000673
so part of: PTGES3L
location: join(845953..845960,848626..848739,848892..848958,849620..849718,850484..850573,851984..852037,852840..852851)
location: region:845953-852851:1
so has part: feature:845953-845960:1:exon
so has part: feature:848626-848739:1:exon
so has part: feature:848892-848958:1:exon
so has part: feature:849620-849718:1:exon
so has part: feature:850484-850573:1:exon
so has part: feature:851984-852037:1:exon
so has part: feature:852840-852851:1:exon

XP_030397030.1
type: Protein
SIO_000068: ncbiprotein

position:845953:1
position: 845953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852851:1
position: 852851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845953-845960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848626-848739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:848892-848958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:849620-849718:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850484-850573:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851984-852037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852840-852851:1:exon

LOC115638959
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 854104..860791
location: region:854104-860791:1
so has part: feature:854104-860791:1:exon
subclass of: SO_0000010

115638959
type: Gene
SIO_000068: ncbigene

position:854104:1
position: 854104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860791:1
position: 860791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854104-860791:1:exon

LOC115638959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638959
product: alanyl-tRNA editing protein Aarsd1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030541150.1
SIO_010081: LOC115638959
subclass of: SO_0000673
so part of: LOC115638959
location: join(854104..854251,854296..854404,854519..854644,854889..855048,856321..856378,856763..856919,857052..857168,857770..857900,858088..858154,858398..858489,859219..859273,859839..859933,860551..860791)
location: region:854104-860791:1
so has part: feature:854104-854251:1:exon
so has part: feature:854296-854404:1:exon
so has part: feature:854519-854644:1:exon
so has part: feature:854889-855048:1:exon
so has part: feature:856321-856378:1:exon
so has part: feature:856763-856919:1:exon
so has part: feature:857052-857168:1:exon
so has part: feature:857770-857900:1:exon
so has part: feature:858088-858154:1:exon
so has part: feature:858398-858489:1:exon
so has part: feature:859219-859273:1:exon
so has part: feature:859839-859933:1:exon
so has part: feature:860551-860791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854104-854251:1:exon

position:854251:1
position: 854251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:854296-854404:1:exon

position:854296:1
position: 854296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854404:1
position: 854404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:854519-854644:1:exon

position:854519:1
position: 854519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854644:1
position: 854644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:854889-855048:1:exon

position:854889:1
position: 854889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855048:1
position: 855048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:856321-856378:1:exon

position:856321:1
position: 856321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856378:1
position: 856378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:856763-856919:1:exon

position:856763:1
position: 856763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856919:1
position: 856919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:857052-857168:1:exon

position:857052:1
position: 857052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857168:1
position: 857168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:857770-857900:1:exon

position:857770:1
position: 857770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857900:1
position: 857900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:858088-858154:1:exon

position:858088:1
position: 858088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858154:1
position: 858154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:858398-858489:1:exon

position:858398:1
position: 858398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858489:1
position: 858489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:859219-859273:1:exon

position:859219:1
position: 859219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859273:1
position: 859273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:859839-859933:1:exon

position:859839:1
position: 859839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859933:1
position: 859933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:860551-860791:1:exon

position:860551:1
position: 860551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115638959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638959
product: alanyl-tRNA editing protein Aarsd1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030541151.1
SIO_010081: LOC115638959
subclass of: SO_0000673
so part of: LOC115638959
location: join(854163..854404,854519..854644,854889..855048,856321..856378,856763..856919,857052..857168,857770..857900,858088..858154,858398..858489,859219..859273,859839..859933,860551..860791)
location: region:854163-860791:1
so has part: feature:854163-854404:1:exon
so has part: feature:854519-854644:1:exon
so has part: feature:854889-855048:1:exon
so has part: feature:856321-856378:1:exon
so has part: feature:856763-856919:1:exon
so has part: feature:857052-857168:1:exon
so has part: feature:857770-857900:1:exon
so has part: feature:858088-858154:1:exon
so has part: feature:858398-858489:1:exon
so has part: feature:859219-859273:1:exon
so has part: feature:859839-859933:1:exon
so has part: feature:860551-860791:1:exon

position:854163:1
position: 854163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854163-854404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854519-854644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854889-855048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856321-856378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:856763-856919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:857052-857168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:857770-857900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858088-858154:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:858398-858489:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859219-859273:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859839-859933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:860551-860791:1:exon

LOC115638959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alanyl-tRNA editing protein Aarsd1-like
translation: MVFQCQRDSWARQFTTRVASCRPAELPAEGGAKETLRGFHVVLEDTILFPEGGGQPDDRGLIDDIPVLRVTRQGPAAVHFVQTPLEPGSEVLLTVDWDRRFDHMQQHSGQHLITALADLMFGFKTTSWELGHQRTVIELDTPSVTAEQVEALEKNVNEKIRARIPVVVREHSEDDPEIETVRSRGLPDNHTGPVRIISIEGIDDNMCCGTHVSNLSDLQVIKLLGTEKGKKNKTNLVFLAGNRVLKSVERSHSIEKALTSLLKNGAEEHVEAVKRLQNSVKLLQKNNLNLLRDLAVLTAQNFKSNPGRGRVFVLHRKDGDSEFMNIIANEIGTEDTLLFLTVGDEKAAGLFLLAGPSELVEKLGPRVAELLEGKGAGKRDRFQGKATRMSRRAEVQALLQDFIGHQTLEE
SIO_010081: LOC115638959
subclass of: SO_0000673
so part of: LOC115638959
location: join(854366..854404,854519..854644,854889..855048,856321..856378,856763..856919,857052..857168,857770..857900,858088..858154,858398..858489,859219..859273,859839..859933,860551..860686)
location: region:854366-860686:1
so has part: feature:854366-854404:1:exon
so has part: feature:854519-854644:1:exon
so has part: feature:854889-855048:1:exon
so has part: feature:856321-856378:1:exon
so has part: feature:856763-856919:1:exon
so has part: feature:857052-857168:1:exon
so has part: feature:857770-857900:1:exon
so has part: feature:858088-858154:1:exon
so has part: feature:858398-858489:1:exon
so has part: feature:859219-859273:1:exon
so has part: feature:859839-859933:1:exon
so has part: feature:860551-860686:1:exon

XP_030397010.1
type: Protein
SIO_000068: ncbiprotein

position:854366:1
position: 854366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860686:1
position: 860686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854366-854404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854519-854644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854889-855048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856321-856378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:856763-856919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:857052-857168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:857770-857900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858088-858154:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:858398-858489:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859219-859273:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859839-859933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:860551-860686:1:exon

LOC115638959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alanyl-tRNA editing protein Aarsd1-like
translation: MVFQCQRDSWARQFTTRVASCRPAELPAEGGAKETLRGFHVVLEDTILFPEGGGQPDDRGLIDDIPVLRVTRQGPAAVHFVQTPLEPGSEVLLTVDWDRRFDHMQQHSGQHLITALADLMFGFKTTSWELGHQRTVIELDTPSVTAEQVEALEKNVNEKIRARIPVVVREHSEDDPEIETVRSRGLPDNHTGPVRIISIEGIDDNMCCGTHVSNLSDLQVIKLLGTEKGKKNKTNLVFLAGNRVLKSVERSHSIEKALTSLLKNGAEEHVEAVKRLQNSVKLLQKNNLNLLRDLAVLTAQNFKSNPGRGRVFVLHRKDGDSEFMNIIANEIGTEDTLLFLTVGDEKAAGLFLLAGPSELVEKLGPRVAELLEGKGAGKRDRFQGKATRMSRRAEVQALLQDFIGHQTLEE
SIO_010081: LOC115638959
subclass of: SO_0000673
so part of: LOC115638959
location: join(854366..854404,854519..854644,854889..855048,856321..856378,856763..856919,857052..857168,857770..857900,858088..858154,858398..858489,859219..859273,859839..859933,860551..860686)
location: region:854366-860686:1
so has part: feature:854366-854404:1:exon
so has part: feature:854519-854644:1:exon
so has part: feature:854889-855048:1:exon
so has part: feature:856321-856378:1:exon
so has part: feature:856763-856919:1:exon
so has part: feature:857052-857168:1:exon
so has part: feature:857770-857900:1:exon
so has part: feature:858088-858154:1:exon
so has part: feature:858398-858489:1:exon
so has part: feature:859219-859273:1:exon
so has part: feature:859839-859933:1:exon
so has part: feature:860551-860686:1:exon

XP_030397011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854366-854404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854519-854644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854889-855048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856321-856378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:856763-856919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:857052-857168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:857770-857900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858088-858154:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:858398-858489:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859219-859273:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859839-859933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:860551-860686:1:exon

LOC115638964
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(864124..869259)
location: region:864124-869259:-1
so has part: feature:864124-869259:-1:exon
subclass of: SO_0000010

115638964
type: Gene
SIO_000068: ncbigene

position:864124:-1
position: 864124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869259:-1
position: 869259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864124-869259:-1:exon

LOC115638964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638964
product: glucose-6-phosphatase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030541163.1
SIO_010081: LOC115638964
subclass of: SO_0000673
so part of: LOC115638964
location: complement(join(864124..864146,864972..865448,866234..866349,867205..867211,867974..868069,868164..868273,869042..869259))
location: region:864124-869259:-1
so has part: feature:869042-869259:-1:exon
so has part: feature:868164-868273:-1:exon
so has part: feature:867974-868069:-1:exon
so has part: feature:867205-867211:-1:exon
so has part: feature:866234-866349:-1:exon
so has part: feature:864972-865448:-1:exon
so has part: feature:864124-864146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:869042-869259:-1:exon

position:869042:-1
position: 869042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868164-868273:-1:exon

position:868164:-1
position: 868164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868273:-1
position: 868273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:867974-868069:-1:exon

position:867974:-1
position: 867974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868069:-1
position: 868069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:867205-867211:-1:exon

position:867205:-1
position: 867205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867211:-1
position: 867211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:866234-866349:-1:exon

position:866234:-1
position: 866234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866349:-1
position: 866349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:864972-865448:-1:exon

position:864972:-1
position: 864972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865448:-1
position: 865448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:864124-864146:-1:exon

position:864146:-1
position: 864146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase-like isoform X2
translation: MDLLHSAGVQVVQYLQENYQGSQGWFLFISFAADLRNTFFIFFPIWFHLCEAVGVKLIWVAVIGDWLNLVFKWILFGQRPYWWVHETNYYGNASTPVIQQFPLTCETGPGSPSGHTMGSAGVYYVMVTALLPCVQGTRHGSFSWCLRGLLWLVFWAVQVCVCLSRVFLAAHFPHQVIAGVISGMVVAEAFDHIHSIYNASLRRYLGTTLFLFSFALGFYLLLKALGVDLLWTLEKAKRWCDRPEWIHIETTPFAGLLRNLGILFGLGLALNSQMYLESCKGKMGQQLPFRLSCILASLLVLHLFDSFDLPADRELLFYVLSFCKSAAAHLCAVALIPYCIAHLCSLPL
SIO_010081: LOC115638964
subclass of: SO_0000673
so part of: LOC115638964
location: complement(join(864124..864146,864972..865448,866234..866349,867205..867211,867974..868069,868164..868273,869042..869259))
location: region:864124-869259:-1
so has part: feature:869042-869259:-1:exon
so has part: feature:868164-868273:-1:exon
so has part: feature:867974-868069:-1:exon
so has part: feature:867205-867211:-1:exon
so has part: feature:866234-866349:-1:exon
so has part: feature:864972-865448:-1:exon
so has part: feature:864124-864146:-1:exon

XP_030397023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:869042-869259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868164-868273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867974-868069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:867205-867211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866234-866349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:864972-865448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:864124-864146:-1:exon

LOC115638964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638964
product: glucose-6-phosphatase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030541162.1
SIO_010081: LOC115638964
subclass of: SO_0000673
so part of: LOC115638964
location: complement(join(864937..865448,866234..866349,867964..868069,868164..868273,869042..869259))
location: region:864937-869259:-1
so has part: feature:869042-869259:-1:exon
so has part: feature:868164-868273:-1:exon
so has part: feature:867964-868069:-1:exon
so has part: feature:866234-866349:-1:exon
so has part: feature:864937-865448:-1:exon

position:864937:-1
position: 864937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869042-869259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868164-868273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867964-868069:-1:exon

position:867964:-1
position: 867964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:866234-866349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864937-865448:-1:exon

LOC115638964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase-like isoform X1
translation: MDLLHSAGVQVVQYLQENYQGSQGWFLFISFAADLRNTFFIFFPIWFHLCEAVGVKLIWVAVIGDWLNLVFKWILFGQRPYWWVHETNYYGNASTPVIQQFPLTCETGPGSPSGHTMGSAGVYYVMVTALLPCVQGTRHGSCAARCLRGLLWLVFWAVQVCVCLSRVFLAAHFPHQVIAGVISGMVVAEAFDHIHSIYNASLRRYLGTTLFLFSFALGFYLLLKALGVDLLWTLEKAKRWCDRPEWIHIETTPFAGLLRNLGILFGLGLALNSQMYLESCKGKMGQQLPFRLSCILASLLVLHLFDSFDLPADRELLFYVLSFCKSAAAHLCAVALIPYCIAQVLRRGDKKSL
SIO_010081: LOC115638964
subclass of: SO_0000673
so part of: LOC115638964
location: complement(join(864937..865448,866234..866349,867964..868069,868164..868273,869042..869259))
location: region:864937-869259:-1
so has part: feature:869042-869259:-1:exon
so has part: feature:868164-868273:-1:exon
so has part: feature:867964-868069:-1:exon
so has part: feature:866234-866349:-1:exon
so has part: feature:864937-865448:-1:exon

XP_030397022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:869042-869259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868164-868273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867964-868069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866234-866349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864937-865448:-1:exon

LOC115638963
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(872107..878992)
location: region:872107-878992:-1
so has part: feature:872107-878992:-1:exon
subclass of: SO_0000010

115638963
type: Gene
SIO_000068: ncbigene

position:872107:-1
position: 872107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878992:-1
position: 878992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:872107-878992:-1:exon

LOC115638963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638963
product: glucose-6-phosphatase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030541161.1
SIO_010081: LOC115638963
subclass of: SO_0000673
so part of: LOC115638963
location: complement(join(872107..872618,873895..874010,874776..874878,876033..876142,878763..878992))
location: region:872107-878992:-1
so has part: feature:878763-878992:-1:exon
so has part: feature:876033-876142:-1:exon
so has part: feature:874776-874878:-1:exon
so has part: feature:873895-874010:-1:exon
so has part: feature:872107-872618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878763-878992:-1:exon

position:878763:-1
position: 878763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:876033-876142:-1:exon

position:876033:-1
position: 876033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876142:-1
position: 876142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:874776-874878:-1:exon

position:874776:-1
position: 874776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874878:-1
position: 874878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:873895-874010:-1:exon

position:873895:-1
position: 873895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874010:-1
position: 874010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:872107-872618:-1:exon

position:872618:-1
position: 872618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638963
product: glucose-6-phosphatase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030541160.1
SIO_010081: LOC115638963
subclass of: SO_0000673
so part of: LOC115638963
location: complement(join(872107..872618,873895..874010,874773..874878,876033..876142,878763..878992))
location: region:872107-878992:-1
so has part: feature:878763-878992:-1:exon
so has part: feature:876033-876142:-1:exon
so has part: feature:874773-874878:-1:exon
so has part: feature:873895-874010:-1:exon
so has part: feature:872107-872618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878763-878992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876033-876142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874773-874878:-1:exon

position:874773:-1
position: 874773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:873895-874010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:872107-872618:-1:exon

LOC115638963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase-like isoform X2
translation: METGMDFIHSSGVQITHYLQENYQGSQGWFLFISFAADLRNTFFILFPIWFHLCEAVGVELIWVAVIGDWLNLVFKWILFGQRPYWWVHETGYYGNTSTPVIQQFPVTCENGPGSPSGHAMGSAGVYYVMVMALLSTPCRRRRSPFQQCLRGALWVSFWGVQVSVSLSRIFLAAHFPHQVIMGVVSGMAVAETFRHIPSIYNASLRRYLGTTLFLFSFTLGFYLLLKALGVDLLWSVEKAKRWCDRPEWVHIDTTPFAGLLRNLGILFGLGLALNSQMYLESCKGKMGQQLPFRLSCIAASLIVLHLFDSFKPPTKVELLFYVLSFCKSATVPVAAAGLIPYCVARLIRRQEEKVL
SIO_010081: LOC115638963
subclass of: SO_0000673
so part of: LOC115638963
location: complement(join(872107..872618,873895..874010,874776..874878,876033..876142,878763..878992))
location: region:872107-878992:-1
so has part: feature:878763-878992:-1:exon
so has part: feature:876033-876142:-1:exon
so has part: feature:874776-874878:-1:exon
so has part: feature:873895-874010:-1:exon
so has part: feature:872107-872618:-1:exon

XP_030397021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:878763-878992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876033-876142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874776-874878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873895-874010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:872107-872618:-1:exon

LOC115638963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase-like isoform X1
translation: METGMDFIHSSGVQITHYLQENYQGSQGWFLFISFAADLRNTFFILFPIWFHLCEAVGVELIWVAVIGDWLNLVFKWILFGQRPYWWVHETGYYGNTSTPVIQQFPVTCENGPGSPSGHAMGSAGVYYVMVMALLSTPCRRRRSPFQQQCLRGALWVSFWGVQVSVSLSRIFLAAHFPHQVIMGVVSGMAVAETFRHIPSIYNASLRRYLGTTLFLFSFTLGFYLLLKALGVDLLWSVEKAKRWCDRPEWVHIDTTPFAGLLRNLGILFGLGLALNSQMYLESCKGKMGQQLPFRLSCIAASLIVLHLFDSFKPPTKVELLFYVLSFCKSATVPVAAAGLIPYCVARLIRRQEEKVL
SIO_010081: LOC115638963
subclass of: SO_0000673
so part of: LOC115638963
location: complement(join(872107..872618,873895..874010,874773..874878,876033..876142,878763..878992))
location: region:872107-878992:-1
so has part: feature:878763-878992:-1:exon
so has part: feature:876033-876142:-1:exon
so has part: feature:874773-874878:-1:exon
so has part: feature:873895-874010:-1:exon
so has part: feature:872107-872618:-1:exon

XP_030397020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:878763-878992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876033-876142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874773-874878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873895-874010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:872107-872618:-1:exon

LOC115638962
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(885466..893423)
location: region:885466-893423:-1
so has part: feature:885466-893423:-1:exon
subclass of: SO_0000010

115638962
type: Gene
SIO_000068: ncbigene

position:885466:-1
position: 885466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893423:-1
position: 893423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885466-893423:-1:exon

LOC115638962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638962
product: glucose-6-phosphatase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030541159.1
SIO_010081: LOC115638962
subclass of: SO_0000673
so part of: LOC115638962
location: complement(join(885466..886441,887755..887870,888631..888736,892010..892119,893082..893423))
location: region:885466-893423:-1
so has part: feature:893082-893423:-1:exon
so has part: feature:892010-892119:-1:exon
so has part: feature:888631-888736:-1:exon
so has part: feature:887755-887870:-1:exon
so has part: feature:885466-886441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893082-893423:-1:exon

position:893082:-1
position: 893082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892010-892119:-1:exon

position:892010:-1
position: 892010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892119:-1
position: 892119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:888631-888736:-1:exon

position:888631:-1
position: 888631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888736:-1
position: 888736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:887755-887870:-1:exon

position:887755:-1
position: 887755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887870:-1
position: 887870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885466-886441:-1:exon

position:886441:-1
position: 886441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphatase-like
translation: MEAGMNVLHDMGIQATRYLQENYQGSQDWFLFISFAADLRNTFFILFPIWFHLCEAVGIKLIWVAVIGDWLNLVFKWILFGQRPYWWVRETSYYGNTSSPAIQQFPLTCETGPGSPSGHAMGSAGVYYVMVTAILSIALGKKQPTIKDQFLRTALWAGFWAVQVCVCLSRVFIAAHFPHQVIAGVISGMAVAEAFRHIPSIYDTSLRRYLGTTLFLFSFALGFYLLLKALGVDLLWTLEKAKRWCDRPEWVHIDTTPFAGLLRNLGILFGLGLALNSQMYLESCKGKMGQQLPFRLSCIAASLIVLHLFDSFKPPTKVELLFYVLSFCKSAAVPVAAAGLIPYCVAQVLRQQDKKAL
SIO_010081: LOC115638962
subclass of: SO_0000673
so part of: LOC115638962
location: complement(join(885930..886441,887755..887870,888631..888736,892010..892119,893082..893311))
location: region:885930-893311:-1
so has part: feature:893082-893311:-1:exon
so has part: feature:892010-892119:-1:exon
so has part: feature:888631-888736:-1:exon
so has part: feature:887755-887870:-1:exon
so has part: feature:885930-886441:-1:exon

XP_030397019.1
type: Protein
SIO_000068: ncbiprotein

position:885930:-1
position: 885930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893311:-1
position: 893311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893082-893311:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892010-892119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:888631-888736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887755-887870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885930-886441:-1:exon

LOC115638955
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(907016..915334)
location: region:907016-915334:-1
so has part: feature:907016-915334:-1:exon
subclass of: SO_0000010

115638955
type: Gene
SIO_000068: ncbigene

position:907016:-1
position: 907016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915334:-1
position: 915334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907016-915334:-1:exon

LOC115638955
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638955
product: membrane primary amine oxidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030541144.1
SIO_010081: LOC115638955
subclass of: SO_0000673
so part of: LOC115638955
location: complement(join(907016..907663,907965..908094,910466..910751,913361..915334))
location: region:907016-915334:-1
so has part: feature:913361-915334:-1:exon
so has part: feature:910466-910751:-1:exon
so has part: feature:907965-908094:-1:exon
so has part: feature:907016-907663:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:913361-915334:-1:exon

position:913361:-1
position: 913361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:910466-910751:-1:exon

position:910466:-1
position: 910466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910751:-1
position: 910751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:907965-908094:-1:exon

position:907965:-1
position: 907965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908094:-1
position: 908094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:907016-907663:-1:exon

position:907663:-1
position: 907663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane primary amine oxidase-like
translation: MNLKTVLILLVLALATIFALVCVLLTRGVKPATCEPQSLSSQKGEHSDQSLVFADLTPEEMKQVVTYLQENLGVPLVDASQANPSDNCIYYVDVQLPTKAEALGFLDRGGRRPPRQALAVVYFGNQPDPNVTEYVVGPLPKPTTHRDVTVRKYGGKLPYHRRPVTEKEYKDIDRFVYQEFSKAPGLLRECCDYGETNFATLTSVPRGFQSGDRATWFVLFQNVNGSGFYLHPVGLEVLVNHSSLDASQWRISKVFYNGQYYEDMEQLETEFIQGRVKEVKVKKVQPDEEFGSMRPRAAPMAPGPLQYEPRGPRYSIQNNHVIFQSWSFAFGMDVNTGPRLFDIKFNGERIVYELSLQEALAVYGSNCPGGMVTRYMDASFGIGKSAFELVRGVDCPYTATYVDRHYLVESETPKLNKNSLCIFEQDTSVPLRRHYSNLQSLYYGGLTKYALVLRAISTLINYDYVWDFIFYQNGAIEVKIHATGYISSSFLYGTGTEHGSQVGEHTLGTIHNHFINYKVDLDVGGTKNSLVAHDMTFDTVQAPWSPEHQIQRPRLTKKVLDTEDKAVFPLHSKIPRYIHFTTNRENKWGHQRGYRIQIVSFAGDHLPEASSMERSISWGRYKLAVTKRKEEEPTSTSIYNQNDPWTPTVAFADFIDNETIVNEDLVAWISVGFLHVPHTEDIPNTVTVGNGVGFFLRPYNYFDEDPSVHSPDSIYFRSDQDPSMCEVHPVACLSKTASCSPALPAFTYNGFRNQTGP
SIO_010081: LOC115638955
subclass of: SO_0000673
so part of: LOC115638955
location: complement(join(907379..907663,907965..908094,910466..910751,913361..914933))
location: region:907379-914933:-1
so has part: feature:913361-914933:-1:exon
so has part: feature:910466-910751:-1:exon
so has part: feature:907965-908094:-1:exon
so has part: feature:907379-907663:-1:exon

XP_030397004.1
type: Protein
SIO_000068: ncbiprotein

position:907379:-1
position: 907379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914933:-1
position: 914933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913361-914933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910466-910751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:907965-908094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907379-907663:-1:exon

LOC115638956
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(921362..937450)
location: region:921362-937450:-1
so has part: feature:921362-937450:-1:exon
subclass of: SO_0000010

115638956
type: Gene
SIO_000068: ncbigene

position:921362:-1
position: 921362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937450:-1
position: 937450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921362-937450:-1:exon

LOC115638956
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638956
product: membrane primary amine oxidase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030541146.1
SIO_010081: LOC115638956
subclass of: SO_0000673
so part of: LOC115638956
location: complement(join(921362..922182,922707..922836,923982..924267,933886..935272,936662..937450))
location: region:921362-937450:-1
so has part: feature:936662-937450:-1:exon
so has part: feature:933886-935272:-1:exon
so has part: feature:923982-924267:-1:exon
so has part: feature:922707-922836:-1:exon
so has part: feature:921362-922182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:936662-937450:-1:exon

position:936662:-1
position: 936662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933886-935272:-1:exon

position:933886:-1
position: 933886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935272:-1
position: 935272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:923982-924267:-1:exon

position:923982:-1
position: 923982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924267:-1
position: 924267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:922707-922836:-1:exon

position:922707:-1
position: 922707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922836:-1
position: 922836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:921362-922182:-1:exon

position:922182:-1
position: 922182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638956
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638956
product: membrane primary amine oxidase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_030541145.1
SIO_010081: LOC115638956
subclass of: SO_0000673
so part of: LOC115638956
location: complement(join(921362..922182,922707..922836,923982..924267,933886..935478))
location: region:921362-935478:-1
so has part: feature:933886-935478:-1:exon
so has part: feature:923982-924267:-1:exon
so has part: feature:922707-922836:-1:exon
so has part: feature:921362-922182:-1:exon

position:935478:-1
position: 935478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933886-935478:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923982-924267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:922707-922836:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:921362-922182:-1:exon

LOC115638956
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane primary amine oxidase-like isoform X2
translation: MVQVVRYLQRSLGVPLVDAYNANPSDNCIYYVDVQIPTKAKVLGFLDRGGRRPPRQALAVVYFGNQPDPNVTEYVVGPLPKPTTHQDITVQKYGGKLPYHRRPVLGKEYEQIEIFLRRETFSAAPTFLNRVFDCNGTNFVSLTSAPRGFQSGDRSTWFALFHNVSGYFLHPVGLEVLVDHSSLNVSQWRVRKVFYNGQYYKDLVQLESEFQQGRVKVNPVTRAPPDGGFSSMQPRAPPRAPFPLQYEPHGPRYSVQNNQVISQAWNFAFGVNVNTGIRLFDIRFKGERIVYEISVQDAISVYGSNCPGGMSTRYMDGSFGIGRFMYPLVRGVDCPYSATYVDTHYLVETETPETHKNSICIFEQNSGSPLRRHYSNLQSLYYGGLTNSALVLRSIATLGNYDYVWDFIFYQNGAIEAKVQATGYMTSSFLYGDGLDYGNRVGDHTLGTVHTHSINYKVDLDVGGVNNTVVAHDMAFESVQAPWSPEHQIQRPRLTKAVLDTEDKAAFRLHSNMPRYIYFAANSENKWGHQRGYRIQIVSFTGEHLPETSLMERAISWGRYKLAVTKRKEEEPTSSSIYNQNDPWTPTVAFADFINNETIVNEDLVAWITTGFLHIPHAEDIPNTVTVGNGVSIFLRPYNYYDIDPSIYSPDGVFFTSEQDSSVCEVNHIACLSKSASCLPILPPFTYDGFQNLTRL
SIO_010081: LOC115638956
subclass of: SO_0000673
so part of: LOC115638956
location: complement(join(921898..922182,922707..922836,923982..924267,933886..935272,936662..936664))
location: region:921898-936664:-1
so has part: feature:936662-936664:-1:exon
so has part: feature:933886-935272:-1:exon
so has part: feature:923982-924267:-1:exon
so has part: feature:922707-922836:-1:exon
so has part: feature:921898-922182:-1:exon

XP_030397006.1
type: Protein
SIO_000068: ncbiprotein

position:921898:-1
position: 921898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936664:-1
position: 936664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936662-936664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933886-935272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:923982-924267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:922707-922836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:921898-922182:-1:exon

LOC115638956
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane primary amine oxidase-like isoform X1
translation: MNLKTVLILLVLALATIFALVCVLLTKGVKPASCEQQSLSSQEGKHSDQSLVFADLTPEEMVQVVRYLQRSLGVPLVDAYNANPSDNCIYYVDVQIPTKAKVLGFLDRGGRRPPRQALAVVYFGNQPDPNVTEYVVGPLPKPTTHQDITVQKYGGKLPYHRRPVLGKEYEQIEIFLRRETFSAAPTFLNRVFDCNGTNFVSLTSAPRGFQSGDRSTWFALFHNVSGYFLHPVGLEVLVDHSSLNVSQWRVRKVFYNGQYYKDLVQLESEFQQGRVKVNPVTRAPPDGGFSSMQPRAPPRAPFPLQYEPHGPRYSVQNNQVISQAWNFAFGVNVNTGIRLFDIRFKGERIVYEISVQDAISVYGSNCPGGMSTRYMDGSFGIGRFMYPLVRGVDCPYSATYVDTHYLVETETPETHKNSICIFEQNSGSPLRRHYSNLQSLYYGGLTNSALVLRSIATLGNYDYVWDFIFYQNGAIEAKVQATGYMTSSFLYGDGLDYGNRVGDHTLGTVHTHSINYKVDLDVGGVNNTVVAHDMAFESVQAPWSPEHQIQRPRLTKAVLDTEDKAAFRLHSNMPRYIYFAANSENKWGHQRGYRIQIVSFTGEHLPETSLMERAISWGRYKLAVTKRKEEEPTSSSIYNQNDPWTPTVAFADFINNETIVNEDLVAWITTGFLHIPHAEDIPNTVTVGNGVSIFLRPYNYYDIDPSIYSPDGVFFTSEQDSSVCEVNHIACLSKSASCLPILPPFTYDGFQNLTRL
SIO_010081: LOC115638956
subclass of: SO_0000673
so part of: LOC115638956
location: complement(join(921898..922182,922707..922836,923982..924267,933886..935455))
location: region:921898-935455:-1
so has part: feature:933886-935455:-1:exon
so has part: feature:923982-924267:-1:exon
so has part: feature:922707-922836:-1:exon
so has part: feature:921898-922182:-1:exon

XP_030397005.1
type: Protein
SIO_000068: ncbiprotein

position:935455:-1
position: 935455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933886-935455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923982-924267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:922707-922836:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:921898-922182:-1:exon

PSME3
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: PSME3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(941536..954013)
location: region:941536-954013:-1
so has part: feature:941536-954013:-1:exon
subclass of: SO_0000010

115638965
type: Gene
SIO_000068: ncbigene

position:941536:-1
position: 941536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954013:-1
position: 954013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941536-954013:-1:exon

PSME3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PSME3
product: proteasome activator subunit 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030541166.1
SIO_010081: PSME3
subclass of: SO_0000673
so part of: PSME3
location: complement(join(941536..943347,943915..944001,946155..946209,946380..946447,947113..947181,948435..948547,949103..949151,949453..949557,950475..950507,953862..954013))
location: region:941536-954013:-1
so has part: feature:953862-954013:-1:exon
so has part: feature:950475-950507:-1:exon
so has part: feature:949453-949557:-1:exon
so has part: feature:949103-949151:-1:exon
so has part: feature:948435-948547:-1:exon
so has part: feature:947113-947181:-1:exon
so has part: feature:946380-946447:-1:exon
so has part: feature:946155-946209:-1:exon
so has part: feature:943915-944001:-1:exon
so has part: feature:941536-943347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:953862-954013:-1:exon

position:953862:-1
position: 953862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:950475-950507:-1:exon

position:950475:-1
position: 950475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950507:-1
position: 950507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:949453-949557:-1:exon

position:949453:-1
position: 949453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949557:-1
position: 949557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:949103-949151:-1:exon

position:949103:-1
position: 949103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949151:-1
position: 949151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:948435-948547:-1:exon

position:948435:-1
position: 948435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948547:-1
position: 948547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:947113-947181:-1:exon

position:947113:-1
position: 947113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947181:-1
position: 947181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:946380-946447:-1:exon

position:946380:-1
position: 946380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946447:-1
position: 946447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:946155-946209:-1:exon

position:946155:-1
position: 946155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946209:-1
position: 946209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:943915-944001:-1:exon

position:943915:-1
position: 943915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944001:-1
position: 944001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:941536-943347:-1:exon

position:943347:-1
position: 943347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSME3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PSME3
product: proteasome activator subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030541164.1
SIO_010081: PSME3
subclass of: SO_0000673
so part of: PSME3
location: complement(join(941536..943347,943915..944001,946155..946209,946380..946447,947113..947181,948435..948547,949103..949151,949453..949557,949984..950046,950475..950507,953862..954013))
location: region:941536-954013:-1
so has part: feature:953862-954013:-1:exon
so has part: feature:950475-950507:-1:exon
so has part: feature:949984-950046:-1:exon
so has part: feature:949453-949557:-1:exon
so has part: feature:949103-949151:-1:exon
so has part: feature:948435-948547:-1:exon
so has part: feature:947113-947181:-1:exon
so has part: feature:946380-946447:-1:exon
so has part: feature:946155-946209:-1:exon
so has part: feature:943915-944001:-1:exon
so has part: feature:941536-943347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:953862-954013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:950475-950507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:949984-950046:-1:exon

position:949984:-1
position: 949984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950046:-1
position: 950046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:949453-949557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949103-949151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:948435-948547:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947113-947181:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:946380-946447:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946155-946209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:943915-944001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:941536-943347:-1:exon

PSME3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PSME3
product: proteasome activator subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030541165.1
SIO_010081: PSME3
subclass of: SO_0000673
so part of: PSME3
location: complement(join(941536..943347,943915..944001,946155..946209,946380..946447,947113..947181,948435..948547,949103..949151,949453..949557,949984..950046,950211..950350,950475..950507,953862..953915))
location: region:941536-953915:-1
so has part: feature:953862-953915:-1:exon
so has part: feature:950475-950507:-1:exon
so has part: feature:950211-950350:-1:exon
so has part: feature:949984-950046:-1:exon
so has part: feature:949453-949557:-1:exon
so has part: feature:949103-949151:-1:exon
so has part: feature:948435-948547:-1:exon
so has part: feature:947113-947181:-1:exon
so has part: feature:946380-946447:-1:exon
so has part: feature:946155-946209:-1:exon
so has part: feature:943915-944001:-1:exon
so has part: feature:941536-943347:-1:exon

position:953915:-1
position: 953915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953862-953915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:950475-950507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950211-950350:-1:exon

position:950211:-1
position: 950211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950350:-1
position: 950350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:949984-950046:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949453-949557:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:949103-949151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:948435-948547:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947113-947181:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946380-946447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:946155-946209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:943915-944001:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:941536-943347:-1:exon

PSME3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PSME3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome activator complex subunit 3 isoform X3
translation: MASLLKVDPEVKLKVDSFRERITSEEPILNIHDLTQIHSDMNLPVPDPILLTNSHDGLDGPNMKKRKLEDCEETFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIEKIKRPRSSNAETLY
SIO_010081: PSME3
subclass of: SO_0000673
so part of: PSME3
location: complement(join(943267..943347,943915..944001,946155..946209,946380..946447,947113..947181,948435..948547,949103..949151,949453..949557,950475..950507,953862..953903))
location: region:943267-953903:-1
so has part: feature:953862-953903:-1:exon
so has part: feature:950475-950507:-1:exon
so has part: feature:949453-949557:-1:exon
so has part: feature:949103-949151:-1:exon
so has part: feature:948435-948547:-1:exon
so has part: feature:947113-947181:-1:exon
so has part: feature:946380-946447:-1:exon
so has part: feature:946155-946209:-1:exon
so has part: feature:943915-944001:-1:exon
so has part: feature:943267-943347:-1:exon

XP_030397026.1
type: Protein
SIO_000068: ncbiprotein

position:943267:-1
position: 943267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953903:-1
position: 953903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953862-953903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:950475-950507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:949453-949557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:949103-949151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:948435-948547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:947113-947181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:946380-946447:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:946155-946209:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:943915-944001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:943267-943347:-1:exon

PSME3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PSME3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome activator complex subunit 3 isoform X1
translation: MASLLKVDPEVKLKVDSFRERITSEAEDLVANFFPKKLLELDGFLKEPILNIHDLTQIHSDMNLPVPDPILLTNSHDGLDGPNMKKRKLEDCEETFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIEKIKRPRSSNAETLY
SIO_010081: PSME3
subclass of: SO_0000673
so part of: PSME3
location: complement(join(943267..943347,943915..944001,946155..946209,946380..946447,947113..947181,948435..948547,949103..949151,949453..949557,949984..950046,950475..950507,953862..953903))
location: region:943267-953903:-1
so has part: feature:953862-953903:-1:exon
so has part: feature:950475-950507:-1:exon
so has part: feature:949984-950046:-1:exon
so has part: feature:949453-949557:-1:exon
so has part: feature:949103-949151:-1:exon
so has part: feature:948435-948547:-1:exon
so has part: feature:947113-947181:-1:exon
so has part: feature:946380-946447:-1:exon
so has part: feature:946155-946209:-1:exon
so has part: feature:943915-944001:-1:exon
so has part: feature:943267-943347:-1:exon

XP_030397024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:953862-953903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:950475-950507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:949984-950046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:949453-949557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949103-949151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:948435-948547:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947113-947181:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:946380-946447:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946155-946209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:943915-944001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:943267-943347:-1:exon

PSME3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PSME3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome activator complex subunit 3 isoform X2
translation: MEGCKDSSAFRWESLTLSEAEDLVANFFPKKLLELDGFLKEPILNIHDLTQIHSDMNLPVPDPILLTNSHDGLDGPNMKKRKLEDCEETFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIEKIKRPRSSNAETLY
SIO_010081: PSME3
subclass of: SO_0000673
so part of: PSME3
location: complement(join(943267..943347,943915..944001,946155..946209,946380..946447,947113..947181,948435..948547,949103..949151,949453..949557,949984..950046,950211..950267))
location: region:943267-950267:-1
so has part: feature:950211-950267:-1:exon
so has part: feature:949984-950046:-1:exon
so has part: feature:949453-949557:-1:exon
so has part: feature:949103-949151:-1:exon
so has part: feature:948435-948547:-1:exon
so has part: feature:947113-947181:-1:exon
so has part: feature:946380-946447:-1:exon
so has part: feature:946155-946209:-1:exon
so has part: feature:943915-944001:-1:exon
so has part: feature:943267-943347:-1:exon

XP_030397025.1
type: Protein
SIO_000068: ncbiprotein

position:950267:-1
position: 950267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950211-950267:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949984-950046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:949453-949557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:949103-949151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:948435-948547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:947113-947181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:946380-946447:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:946155-946209:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:943915-944001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:943267-943347:-1:exon

BECN1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: BECN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 955368..961173
location: region:955368-961173:1
so has part: feature:955368-961173:1:exon
subclass of: SO_0000010

115638957
type: Gene
SIO_000068: ncbigene

position:955368:1
position: 955368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961173:1
position: 961173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:955368-961173:1:exon

BECN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: BECN1
product: beclin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_030541147.1
SIO_010081: BECN1
subclass of: SO_0000673
so part of: BECN1
location: join(955368..955621,955975..956042,956265..956323,957064..957154,957445..957581,957767..957961,958249..958395,958925..959074,959159..959219,959698..959840,960385..961173)
location: region:955368-961173:1
so has part: feature:955368-955621:1:exon
so has part: feature:955975-956042:1:exon
so has part: feature:956265-956323:1:exon
so has part: feature:957064-957154:1:exon
so has part: feature:957445-957581:1:exon
so has part: feature:957767-957961:1:exon
so has part: feature:958249-958395:1:exon
so has part: feature:958925-959074:1:exon
so has part: feature:959159-959219:1:exon
so has part: feature:959698-959840:1:exon
so has part: feature:960385-961173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:955368-955621:1:exon

position:955621:1
position: 955621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:955975-956042:1:exon

position:955975:1
position: 955975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956042:1
position: 956042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:956265-956323:1:exon

position:956265:1
position: 956265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956323:1
position: 956323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:957064-957154:1:exon

position:957064:1
position: 957064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957154:1
position: 957154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:957445-957581:1:exon

position:957445:1
position: 957445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957581:1
position: 957581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:957767-957961:1:exon

position:957767:1
position: 957767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957961:1
position: 957961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:958249-958395:1:exon

position:958249:1
position: 958249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958395:1
position: 958395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:958925-959074:1:exon

position:958925:1
position: 958925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959074:1
position: 959074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:959159-959219:1:exon

position:959159:1
position: 959159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959219:1
position: 959219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:959698-959840:1:exon

position:959698:1
position: 959698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959840:1
position: 959840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:960385-961173:1:exon

position:960385:1
position: 960385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BECN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: BECN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beclin-1
translation: MEGSKSSACTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAPAKPGDIHEEETNLTEEAFTENRQDGVSRRFIPPARMMSTESANSFTLIGEASDGGTMENLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNITENECQNYKRCLEILEQMNEDDKEKLQMELKELALEEERLIQELEEVEKNRKMVAENFEKVRAEAERLDQEEAQYQKEYSEFKRQQLELDDELKSVDNQMRYAQIQWDKLRKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK
SIO_010081: BECN1
subclass of: SO_0000673
so part of: BECN1
location: join(955495..955621,955975..956042,956265..956323,957064..957154,957445..957581,957767..957961,958249..958395,958925..959074,959159..959219,959698..959840,960385..960553)
location: region:955495-960553:1
so has part: feature:955495-955621:1:exon
so has part: feature:955975-956042:1:exon
so has part: feature:956265-956323:1:exon
so has part: feature:957064-957154:1:exon
so has part: feature:957445-957581:1:exon
so has part: feature:957767-957961:1:exon
so has part: feature:958249-958395:1:exon
so has part: feature:958925-959074:1:exon
so has part: feature:959159-959219:1:exon
so has part: feature:959698-959840:1:exon
so has part: feature:960385-960553:1:exon

XP_030397007.1
type: Protein
SIO_000068: ncbiprotein

position:955495:1
position: 955495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960553:1
position: 960553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:955495-955621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:955975-956042:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:956265-956323:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957064-957154:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:957445-957581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:957767-957961:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:958249-958395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:958925-959074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:959159-959219:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:959698-959840:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:960385-960553:1:exon

CNTD1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: CNTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(961274..968434)
location: region:961274-968434:-1
so has part: feature:961274-968434:-1:exon
subclass of: SO_0000010

115638970
type: Gene
SIO_000068: ncbigene

position:961274:-1
position: 961274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968434:-1
position: 968434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961274-968434:-1:exon

CNTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CNTD1
product: cyclin N-terminal domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030541173.1
SIO_010081: CNTD1
subclass of: SO_0000673
so part of: CNTD1
location: complement(join(961274..961976,962681..962777,963711..963855,964522..964684,965608..965782,966761..966836,967811..968434))
location: region:961274-968434:-1
so has part: feature:967811-968434:-1:exon
so has part: feature:966761-966836:-1:exon
so has part: feature:965608-965782:-1:exon
so has part: feature:964522-964684:-1:exon
so has part: feature:963711-963855:-1:exon
so has part: feature:962681-962777:-1:exon
so has part: feature:961274-961976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967811-968434:-1:exon

position:967811:-1
position: 967811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:966761-966836:-1:exon

position:966761:-1
position: 966761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966836:-1
position: 966836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:965608-965782:-1:exon

position:965608:-1
position: 965608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965782:-1
position: 965782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:964522-964684:-1:exon

position:964522:-1
position: 964522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964684:-1
position: 964684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:963711-963855:-1:exon

position:963711:-1
position: 963711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963855:-1
position: 963855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:962681-962777:-1:exon

position:962681:-1
position: 962681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962777:-1
position: 962777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:961274-961976:-1:exon

position:961976:-1
position: 961976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CNTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin N-terminal domain-containing protein 1
translation: MSSEPVSRFRTPEPVFGVVAPEIIEDTLICLATENEQYLNELSDQAGCFKETQIVEFVFLLCEKWFLDQSARYQAVEIFERFMIKHVEESYNSIKKSRTNNEQGEDNIWGTLKARMCDTFVLRLVSCIQLASKLSFHYSIINNNTVLKFLQSLDYSYTKQNLVESELAILKALCFQINVPTPFAYVELLLEVLGHNGCLLPMKQLHKMCMHLLDLTYLMRNIIYDTLLKISIENSTPSELQIAKFLSVKEDFMLLAVGIISTSAFILSPEYWNQVVEHLNCITGITTQSILEFSYAILKHSVGTTNPRKNKGTRSSENYVVPPTK
SIO_010081: CNTD1
subclass of: SO_0000673
so part of: CNTD1
location: complement(join(961821..961976,962681..962777,963711..963855,964522..964684,965608..965782,966761..966836,967811..967976))
location: region:961821-967976:-1
so has part: feature:967811-967976:-1:exon
so has part: feature:966761-966836:-1:exon
so has part: feature:965608-965782:-1:exon
so has part: feature:964522-964684:-1:exon
so has part: feature:963711-963855:-1:exon
so has part: feature:962681-962777:-1:exon
so has part: feature:961821-961976:-1:exon

XP_030397033.1
type: Protein
SIO_000068: ncbiprotein

position:961821:-1
position: 961821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967976:-1
position: 967976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967811-967976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:966761-966836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:965608-965782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964522-964684:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:963711-963855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962681-962777:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961821-961976:-1:exon

LOC115638968
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 969382..971746
location: region:969382-971746:1
so has part: feature:969382-971746:1:exon
subclass of: SO_0000010

115638968
type: Gene
SIO_000068: ncbigene

position:969382:1
position: 969382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971746:1
position: 971746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969382-971746:1:exon

LOC115638968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638968
product: cytochrome c oxidase assembly factor 3 homolog, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_030541171.1
SIO_010081: LOC115638968
subclass of: SO_0000673
so part of: LOC115638968
location: join(969382..969670,970125..971746)
location: region:969382-971746:1
so has part: feature:969382-969670:1:exon
so has part: feature:970125-971746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:969382-969670:1:exon

position:969670:1
position: 969670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:970125-971746:1:exon

position:970125:1
position: 970125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115638968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 3 homolog, mitochondrial
translation: MTIASALRPLSHVGAGRGSAGKMSAPREPGRDSEAAFAKRIDPAREPELSAEQRRVMQRAEEALRRRGLQRRLRGRNLLTGLGIGAVALGIYGFTFYKISQERFLDELEQEVEAARAQAAKTPVN
SIO_010081: LOC115638968
subclass of: SO_0000673
so part of: LOC115638968
location: join(969397..969670,970125..970228)
location: region:969397-970228:1
so has part: feature:969397-969670:1:exon
so has part: feature:970125-970228:1:exon

XP_030397031.1
type: Protein
SIO_000068: ncbiprotein

position:969397:1
position: 969397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970228:1
position: 970228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969397-969670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970125-970228:1:exon

WNK4
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(972072..996478)
location: region:972072-996478:-1
so has part: feature:972072-996478:-1:exon
subclass of: SO_0000010

115638953
type: Gene
SIO_000068: ncbigene

position:972072:-1
position: 972072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996478:-1
position: 996478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972072-996478:-1:exon

WNK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: WNK4
product: WNK lysine deficient protein kinase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030541138.1
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(972072..973106,973366..973466,974695..974897,975126..975561,975741..975837,976301..976878,977083..977238,977567..977624,977960..978133,978213..978329,978803..978944,979152..979225,979327..979466,979780..980095,980465..980684,980940..981028,982263..982420,982684..982904,983658..983830,995858..996478))
location: region:972072-996478:-1
so has part: feature:995858-996478:-1:exon
so has part: feature:983658-983830:-1:exon
so has part: feature:982684-982904:-1:exon
so has part: feature:982263-982420:-1:exon
so has part: feature:980940-981028:-1:exon
so has part: feature:980465-980684:-1:exon
so has part: feature:979780-980095:-1:exon
so has part: feature:979327-979466:-1:exon
so has part: feature:979152-979225:-1:exon
so has part: feature:978803-978944:-1:exon
so has part: feature:978213-978329:-1:exon
so has part: feature:977960-978133:-1:exon
so has part: feature:977567-977624:-1:exon
so has part: feature:977083-977238:-1:exon
so has part: feature:976301-976878:-1:exon
so has part: feature:975741-975837:-1:exon
so has part: feature:975126-975561:-1:exon
so has part: feature:974695-974897:-1:exon
so has part: feature:973366-973466:-1:exon
so has part: feature:972072-973106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995858-996478:-1:exon

position:995858:-1
position: 995858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:983658-983830:-1:exon

position:983658:-1
position: 983658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983830:-1
position: 983830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:982684-982904:-1:exon

position:982684:-1
position: 982684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982904:-1
position: 982904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:982263-982420:-1:exon

position:982263:-1
position: 982263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982420:-1
position: 982420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:980940-981028:-1:exon

position:980940:-1
position: 980940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981028:-1
position: 981028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:980465-980684:-1:exon

position:980465:-1
position: 980465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980684:-1
position: 980684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:979780-980095:-1:exon

position:979780:-1
position: 979780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980095:-1
position: 980095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:979327-979466:-1:exon

position:979327:-1
position: 979327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979466:-1
position: 979466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:979152-979225:-1:exon

position:979152:-1
position: 979152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979225:-1
position: 979225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:978803-978944:-1:exon

position:978803:-1
position: 978803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978944:-1
position: 978944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:978213-978329:-1:exon

position:978213:-1
position: 978213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978329:-1
position: 978329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:977960-978133:-1:exon

position:977960:-1
position: 977960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978133:-1
position: 978133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:977567-977624:-1:exon

position:977567:-1
position: 977567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977624:-1
position: 977624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:977083-977238:-1:exon

position:977083:-1
position: 977083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977238:-1
position: 977238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:976301-976878:-1:exon

position:976301:-1
position: 976301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976878:-1
position: 976878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:975741-975837:-1:exon

position:975741:-1
position: 975741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975837:-1
position: 975837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:975126-975561:-1:exon

position:975126:-1
position: 975126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975561:-1
position: 975561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:974695-974897:-1:exon

position:974695:-1
position: 974695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974897:-1
position: 974897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:973366-973466:-1:exon

position:973366:-1
position: 973366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973466:-1
position: 973466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:972072-973106:-1:exon

position:973106:-1
position: 973106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WNK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: WNK4
product: WNK lysine deficient protein kinase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030541140.1
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(972072..973106,973366..973466,974695..974897,975126..975561,975741..975837,976301..976878,977083..977238,977567..977624,977960..978133,978213..978329,978803..978944,979152..979225,979327..979466,979780..980095,980465..980684,980940..981028,982272..982420,982684..982904,983658..983830,995858..995940))
location: region:972072-995940:-1
so has part: feature:995858-995940:-1:exon
so has part: feature:983658-983830:-1:exon
so has part: feature:982684-982904:-1:exon
so has part: feature:982272-982420:-1:exon
so has part: feature:980940-981028:-1:exon
so has part: feature:980465-980684:-1:exon
so has part: feature:979780-980095:-1:exon
so has part: feature:979327-979466:-1:exon
so has part: feature:979152-979225:-1:exon
so has part: feature:978803-978944:-1:exon
so has part: feature:978213-978329:-1:exon
so has part: feature:977960-978133:-1:exon
so has part: feature:977567-977624:-1:exon
so has part: feature:977083-977238:-1:exon
so has part: feature:976301-976878:-1:exon
so has part: feature:975741-975837:-1:exon
so has part: feature:975126-975561:-1:exon
so has part: feature:974695-974897:-1:exon
so has part: feature:973366-973466:-1:exon
so has part: feature:972072-973106:-1:exon

position:995940:-1
position: 995940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995858-995940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983658-983830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982684-982904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982272-982420:-1:exon

position:982272:-1
position: 982272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:980940-981028:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980465-980684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:979780-980095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:979327-979466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:979152-979225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978803-978944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978213-978329:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:977960-978133:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:977567-977624:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:977083-977238:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:976301-976878:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:975741-975837:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:975126-975561:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:974695-974897:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:973366-973466:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:972072-973106:-1:exon

WNK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: WNK4
product: WNK lysine deficient protein kinase 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030541142.1
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(972072..973106,973366..973466,974695..974897,975126..975561,975741..975837,976301..976878,977567..977624,977960..978133,978213..978329,978803..978944,979152..979225,979327..979466,979780..980095,980465..980684,980940..981028,982263..982420,982684..982904,983658..983830,995858..995940))
location: region:972072-995940:-1
so has part: feature:995858-995940:-1:exon
so has part: feature:983658-983830:-1:exon
so has part: feature:982684-982904:-1:exon
so has part: feature:982263-982420:-1:exon
so has part: feature:980940-981028:-1:exon
so has part: feature:980465-980684:-1:exon
so has part: feature:979780-980095:-1:exon
so has part: feature:979327-979466:-1:exon
so has part: feature:979152-979225:-1:exon
so has part: feature:978803-978944:-1:exon
so has part: feature:978213-978329:-1:exon
so has part: feature:977960-978133:-1:exon
so has part: feature:977567-977624:-1:exon
so has part: feature:976301-976878:-1:exon
so has part: feature:975741-975837:-1:exon
so has part: feature:975126-975561:-1:exon
so has part: feature:974695-974897:-1:exon
so has part: feature:973366-973466:-1:exon
so has part: feature:972072-973106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995858-995940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983658-983830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982684-982904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982263-982420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980940-981028:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980465-980684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:979780-980095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:979327-979466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:979152-979225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978803-978944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978213-978329:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:977960-978133:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:977567-977624:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:976301-976878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:975741-975837:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:975126-975561:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:974695-974897:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:973366-973466:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:972072-973106:-1:exon

WNK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: WNK4
product: WNK lysine deficient protein kinase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030541141.1
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(972072..973106,974695..974897,975126..975561,975741..975837,976301..976878,977083..977238,977567..977624,977960..978133,978213..978329,978803..978944,979152..979225,979327..979466,979780..980095,980465..980684,980940..981028,982263..982420,982684..982904,983658..983830,995858..995940))
location: region:972072-995940:-1
so has part: feature:995858-995940:-1:exon
so has part: feature:983658-983830:-1:exon
so has part: feature:982684-982904:-1:exon
so has part: feature:982263-982420:-1:exon
so has part: feature:980940-981028:-1:exon
so has part: feature:980465-980684:-1:exon
so has part: feature:979780-980095:-1:exon
so has part: feature:979327-979466:-1:exon
so has part: feature:979152-979225:-1:exon
so has part: feature:978803-978944:-1:exon
so has part: feature:978213-978329:-1:exon
so has part: feature:977960-978133:-1:exon
so has part: feature:977567-977624:-1:exon
so has part: feature:977083-977238:-1:exon
so has part: feature:976301-976878:-1:exon
so has part: feature:975741-975837:-1:exon
so has part: feature:975126-975561:-1:exon
so has part: feature:974695-974897:-1:exon
so has part: feature:972072-973106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995858-995940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983658-983830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982684-982904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982263-982420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980940-981028:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980465-980684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:979780-980095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:979327-979466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:979152-979225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978803-978944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978213-978329:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:977960-978133:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:977567-977624:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:977083-977238:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:976301-976878:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:975741-975837:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:975126-975561:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:974695-974897:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:972072-973106:-1:exon

WNK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK4 isoform X3
translation: MLKGLQHPNIVRFYDSWKSAIKGQICIVLVTELMTSGTLKTYLKRFKKMKLKVLQRWSRQILKGLHFLHTRSPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGMKPNSFYKVKVPELKEIIEGCIRMNKAERYTIQDLLEHSFFQEDTGVHVELAEEDDGVKSGLKLWLRMDDTKKLHGKYKDNNALEFLFELHKDVAEEVAQEMVTLGFVCEADYKLVAKAVRDRVVTIKRKREKLKRAQDELRHQEQEKPLLEELKCPPVPANPPVSPATPGSGDSVFGGTFLPEPEEPEADQHQHFLYRHTSYSSTASDCETDGYLSSSGFVDSPDLSHCHSSTFSTRDPSSPPAAQSESCFPVSIAVSSPMEHLPSTPASEFSSPVDSYASDVASGLSDGCEGLSASEQNAKLPAKRASGKLLRRRARSRLRITNISDKSDRVVECQLQTYNNKMVTFKFDLDGDNPEEIAAVMVNNEFILQSEQDSFIRRIQDIIQRVETLLRKDGHGATRAAGSPQPESLSPSATSNGLPAELQLQDLSRSISASSLLSDLGCSSPGQSELALVQPSLSGSPSENDLFSLADTLPGTQPVGLQPLLPAEPPGSPSAAACSRPSSLTVPGLAPYPLPTSQSFPQTAGPGPQAGGSLLSTTPPRGGLGPLSPPMNSTAPTAPPWSPATSPLFSLAEIFSLAMMSMAQTLLPSVSLAAPPPGGPHAPALIPRPQSLYLGPAHFTSPGPAGQVEPAPHCSWTQEPTSTCVTGGWGPALPPQGLGRSGIGESPLASGRAPAAGALDSGLVSPCSPKPSSHLIVSESPAPGPAKARLSPINEEAKPQILGRFQVTTSKDPANSTLGQQSQSDSEQSGQEPWEGAAGAFSQPLVPSSSATEGSTSPDSDSVPDTPVQDPDELLAEEGTPVALAESDQERPGEGSAESPQQAMVSQVWMSYARSSSYLSSDETESEDEEIWEELQSLRQKHLSEVQTLQAVQKREIEDLYFRMGKQAPPGIVSPAAMLSSRQRRLSKGSFNPSRRNSLQRLELSQPTVTVLPVPIFMDYLSHAPTAMEGW
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(973036..973106,974695..974897,975126..975561,975741..975837,976301..976878,977083..977238,977567..977624,977960..978133,978213..978329,978803..978944,979152..979225,979327..979466,979780..980095,980465..980684,980940..981028,982263..982420,982684..982904,983658..983779))
location: region:973036-983779:-1
so has part: feature:983658-983779:-1:exon
so has part: feature:982684-982904:-1:exon
so has part: feature:982263-982420:-1:exon
so has part: feature:980940-981028:-1:exon
so has part: feature:980465-980684:-1:exon
so has part: feature:979780-980095:-1:exon
so has part: feature:979327-979466:-1:exon
so has part: feature:979152-979225:-1:exon
so has part: feature:978803-978944:-1:exon
so has part: feature:978213-978329:-1:exon
so has part: feature:977960-978133:-1:exon
so has part: feature:977567-977624:-1:exon
so has part: feature:977083-977238:-1:exon
so has part: feature:976301-976878:-1:exon
so has part: feature:975741-975837:-1:exon
so has part: feature:975126-975561:-1:exon
so has part: feature:974695-974897:-1:exon
so has part: feature:973036-973106:-1:exon

XP_030397001.1
type: Protein
SIO_000068: ncbiprotein

position:973036:-1
position: 973036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983779:-1
position: 983779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983658-983779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982684-982904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982263-982420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:980940-981028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980465-980684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:979780-980095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:979327-979466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:979152-979225:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:978803-978944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978213-978329:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:977960-978133:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:977567-977624:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:977083-977238:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:976301-976878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:975741-975837:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:975126-975561:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:974695-974897:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:973036-973106:-1:exon

WNK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK4 isoform X1
translation: MLMLHVAGPPAAGAMSQTEVDLSGCGIALEPGTPGRAAPLRSRGRESRRGSYRFNRRSSAELERLGYEGPPGSGPAGAQEARGDPRALQGAEPAARSGSGSESGGQTSSPPPPGQVSPRGAPPDESRRAQEENEEVETRAVATSPDGRFLKFGIEIGRGSFKTVYKGLDTETTVEVAWCELQTRKLSKAERQRFSEEVEMLKGLQHPNIVRFYDSWKSAIKGQICIVLVTELMTSGTLKTYLKRFKKMKLKVLQRWSRQILKGLHFLHTRSPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGMKPNSFYKVKVPELKEIIEGCIRMNKAERYTIQDLLEHSFFQEDTGVHVELAEEDDGVKSGLKLWLRMDDTKKLHGKYKDNNALEFLFELHKDVAEEVAQEMVTLGFVCEADYKLVAKAVRDRVVTIKRKREKLKRAQDELRHQEQEKPLLEELKCPPVPANPPVSPATPGSGDSVFGGTFLPEPEEPEADQHQHFLYRHTSYSSTASDCETDGYLSSSGFVDSPDLSHCHSSTFSTRDPSSPPAAQSESCFPVSIAVSSPMEHLPSTPASEFSSPVDSYASDVASGLSDGCEGLSASEQNAKLPAKRASGKLLRRRARSRLRITNISDKSDRVVECQLQTYNNKMVTFKFDLDGDNPEEIAAVMVNNEFILQSEQDSFIRRIQDIIQRVETLLRKDGHGATRAAGSPQPESLSPSATSNGLPAELQLQDLSRSISASSLLSDLGCSSPGQSELALVQPSLSGSPSENDLFSLADTLPGTQPVGLQPLLPAEPPGSPSAAACSRPSSLTVPGLAPYPLPTSQSFPQTAGPGPQAGGSLLSTTPPRGGLGPLSPPMNSTAPTAPPWSPATSPLFSLAEIFSLAMMSMAQTLLPSVSLAAPPPGGPHAPALIPRPQSLYLGPAHFTSPGPAGQVEPAPHCSWTQEPTSTCVTGGWGPALPPQGLGRSGIGESPLASGRAPAAGALDSGLVSPCSPKPSSHLIVSESPAPGPAKARLSPINEEAKPQILGRFQVTTSKDPANSTLGQQSQSDSEQSGQEPWEGAAGAFSQPLVPSSSATEGSTSPDSDSVPDTPVQDPDELLAEEGTPVALAESDQERPGEGSAESPQQAMVSQVWMSYARSSSYLSSDETESEDEEIWEELQSLRQKHLSEVQTLQAVQKREIEDLYFRMGKQAPPGIVSPAAMLSSRQRRLSKGSFNPSRRNSLQRLELSQPTAGMMRRNSLSGSSTGSQEQRPSRGVTFAGDLSRM
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(973104..973106,973366..973466,974695..974897,975126..975561,975741..975837,976301..976878,977083..977238,977567..977624,977960..978133,978213..978329,978803..978944,979152..979225,979327..979466,979780..980095,980465..980684,980940..981028,982263..982420,982684..982904,983658..983830,995858..996403))
location: region:973104-996403:-1
so has part: feature:995858-996403:-1:exon
so has part: feature:983658-983830:-1:exon
so has part: feature:982684-982904:-1:exon
so has part: feature:982263-982420:-1:exon
so has part: feature:980940-981028:-1:exon
so has part: feature:980465-980684:-1:exon
so has part: feature:979780-980095:-1:exon
so has part: feature:979327-979466:-1:exon
so has part: feature:979152-979225:-1:exon
so has part: feature:978803-978944:-1:exon
so has part: feature:978213-978329:-1:exon
so has part: feature:977960-978133:-1:exon
so has part: feature:977567-977624:-1:exon
so has part: feature:977083-977238:-1:exon
so has part: feature:976301-976878:-1:exon
so has part: feature:975741-975837:-1:exon
so has part: feature:975126-975561:-1:exon
so has part: feature:974695-974897:-1:exon
so has part: feature:973366-973466:-1:exon
so has part: feature:973104-973106:-1:exon

XP_030396998.1
type: Protein
SIO_000068: ncbiprotein

position:973104:-1
position: 973104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996403:-1
position: 996403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995858-996403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983658-983830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982684-982904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982263-982420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980940-981028:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980465-980684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:979780-980095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:979327-979466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:979152-979225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978803-978944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978213-978329:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:977960-978133:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:977567-977624:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:977083-977238:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:976301-976878:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:975741-975837:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:975126-975561:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:974695-974897:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:973366-973466:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:973104-973106:-1:exon

WNK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK4 isoform X2
translation: MLKGLQHPNIVRFYDSWKSAIKGQICIVLVTELMTSGTLKTYLKRFKKMKLKVLQRWSRQILKGLHFLHTRSPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKGMKPNSFYKVKVPELKEIIEGCIRMNKAERYTIQDLLEHSFFQEDTGVHVELAEEDDGVKSGLKLWLRMDDTKKLHGKYKDNNALEFLFELHKDVAEEVAQEMVTLGFVCEADYKLVAKAVRDRVVTIKRKREKLKRAQDELRHQEQEKPLLEELKCPPVPANPPVSPATPGSGDSVFGGTFLPEPEEPEADQHQHFLYRHTSYSSTASDCETDGYLSSSGFVDSPDLSHCHSSTFSTRDPSSPPAAQSESCFPVSIAVSSPMEHLPSTPASEFSSPVDSYASDVASGLSDGCEGLSASEQNAKLPAKRASGKLLRRRARSRLRITNISDKSDRVVECQLQTYNNKMVTFKFDLDGDNPEEIAAVMVNNEFILQSEQDSFIRRIQDIIQRVETLLRKDGHGATRAAGSPQPESLSPSATSNGLPAELQLQDLSRSISASSLLSDLGCSSPGQSELALVQPSLSGSPSENDLFSLADTLPGTQPVGLQPLLPAEPPGSPSAAACSRPSSLTVPGLAPYPLPTSQSFPQTAGPGPQAGGSLLSTTPPRGGLGPLSPPMNSTAPTAPPWSPATSPLFSLAEIFSLAMMSMAQTLLPSVSLAAPPPGGPHAPALIPRPQSLYLGPAHFTSPGPAGQVEPAPHCSWTQEPTSTCVTGGWGPALPPQGLGRSGIGESPLASGRAPAAGALDSGLVSPCSPKPSSHLIVSESPAPGPAKARLSPINEEAKPQILGRFQVTTSKDPANSTLGQQSQSDSEQSGQEPWEGAAGAFSQPLVPSSSATEGSTSPDSDSVPDTPVQDPDELLAEEGTPVALAESDQERPGEGSAESPQQAMVSQVWMSYARSSSYLSSDETESEDEEIWEELQSLRQKHLSEVQTLQAVQKREIEDLYFRMGKQAPPGIVSPAAMLSSRQRRLSKGSFNPSRRNSLQRLELSQPTAGMMRRNSLSGSSTGSQEQRPSRGVTFAGDLSRM
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(973104..973106,973366..973466,974695..974897,975126..975561,975741..975837,976301..976878,977083..977238,977567..977624,977960..978133,978213..978329,978803..978944,979152..979225,979327..979466,979780..980095,980465..980684,980940..981028,982272..982420,982684..982904,983658..983779))
location: region:973104-983779:-1
so has part: feature:983658-983779:-1:exon
so has part: feature:982684-982904:-1:exon
so has part: feature:982272-982420:-1:exon
so has part: feature:980940-981028:-1:exon
so has part: feature:980465-980684:-1:exon
so has part: feature:979780-980095:-1:exon
so has part: feature:979327-979466:-1:exon
so has part: feature:979152-979225:-1:exon
so has part: feature:978803-978944:-1:exon
so has part: feature:978213-978329:-1:exon
so has part: feature:977960-978133:-1:exon
so has part: feature:977567-977624:-1:exon
so has part: feature:977083-977238:-1:exon
so has part: feature:976301-976878:-1:exon
so has part: feature:975741-975837:-1:exon
so has part: feature:975126-975561:-1:exon
so has part: feature:974695-974897:-1:exon
so has part: feature:973366-973466:-1:exon
so has part: feature:973104-973106:-1:exon

XP_030397000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:983658-983779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982684-982904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982272-982420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:980940-981028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980465-980684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:979780-980095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:979327-979466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:979152-979225:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:978803-978944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978213-978329:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:977960-978133:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:977567-977624:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:977083-977238:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:976301-976878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:975741-975837:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:975126-975561:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:974695-974897:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:973366-973466:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:973104-973106:-1:exon

WNK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK4 isoform X4
translation: MLKGLQHPNIVRFYDSWKSAIKGQICIVLVTELMTSGTLKTYLKRFKKMKLKVLQRWSRQILKGLHFLHTRSPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGMKPNSFYKVKVPELKEIIEGCIRMNKAERYTIQDLLEHSFFQEDTGVHVELAEEDDGVKSGLKLWLRMDDTKKLHGKYKDNNALEFLFELHKDVAEEVAQEMVTLGFVCEADYKLVAKAVRDRVVTIKRKREKLKRAQDELRHQEQEKPLLEELKCPPVPANPPVSPATPGSGDSVFGGTFLPEPEEPEADQHQHFLYRHTSYSSTASDCETDGYLSSSGFVDSPDLSHCHSSTFSTRDPSSPPAAQSESCFPVSIAVSSPMEHLPSTPASEFSSPVDSYASDVASGLSDGCEGLSASEQNAKLPAKRASGKLLRRRARSRLRITNISDKSDRVVECQLQTYNNKMVTFKFDLDGDNPEEIAAVMVNNEFILQSEQDSFIRRIQDIIQRVETLLRKDGHGATRAAGSPQPESLSPSATSNGLPAELQLQDLSRSISASSLLSGSPSAAACSRPSSLTVPGLAPYPLPTSQSFPQTAGPGPQAGGSLLSTTPPRGGLGPLSPPMNSTAPTAPPWSPATSPLFSLAEIFSLAMMSMAQTLLPSVSLAAPPPGGPHAPALIPRPQSLYLGPAHFTSPGPAGQVEPAPHCSWTQEPTSTCVTGGWGPALPPQGLGRSGIGESPLASGRAPAAGALDSGLVSPCSPKPSSHLIVSESPAPGPAKARLSPINEEAKPQILGRFQVTTSKDPANSTLGQQSQSDSEQSGQEPWEGAAGAFSQPLVPSSSATEGSTSPDSDSVPDTPVQDPDELLAEEGTPVALAESDQERPGEGSAESPQQAMVSQVWMSYARSSSYLSSDETESEDEEIWEELQSLRQKHLSEVQTLQAVQKREIEDLYFRMGKQAPPGIVSPAAMLSSRQRRLSKGSFNPSRRNSLQRLELSQPTAGMMRRNSLSGSSTGSQEQRPSRGVTFAGDLSRM
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: complement(join(973104..973106,973366..973466,974695..974897,975126..975561,975741..975837,976301..976878,977567..977624,977960..978133,978213..978329,978803..978944,979152..979225,979327..979466,979780..980095,980465..980684,980940..981028,982263..982420,982684..982904,983658..983779))
location: region:973104-983779:-1
so has part: feature:983658-983779:-1:exon
so has part: feature:982684-982904:-1:exon
so has part: feature:982263-982420:-1:exon
so has part: feature:980940-981028:-1:exon
so has part: feature:980465-980684:-1:exon
so has part: feature:979780-980095:-1:exon
so has part: feature:979327-979466:-1:exon
so has part: feature:979152-979225:-1:exon
so has part: feature:978803-978944:-1:exon
so has part: feature:978213-978329:-1:exon
so has part: feature:977960-978133:-1:exon
so has part: feature:977567-977624:-1:exon
so has part: feature:976301-976878:-1:exon
so has part: feature:975741-975837:-1:exon
so has part: feature:975126-975561:-1:exon
so has part: feature:974695-974897:-1:exon
so has part: feature:973366-973466:-1:exon
so has part: feature:973104-973106:-1:exon

XP_030397002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:983658-983779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982684-982904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982263-982420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:980940-981028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980465-980684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:979780-980095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:979327-979466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:979152-979225:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:978803-978944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978213-978329:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:977960-978133:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:977567-977624:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:976301-976878:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:975741-975837:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:975126-975561:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:974695-974897:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:973366-973466:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:973104-973106:-1:exon

LOC115638971
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 973473..974688
location: region:973473-974688:1
so has part: feature:973473-974688:1:exon
subclass of: SO_0000011

115638971
type: Gene
SIO_000068: ncbigene

position:973473:1
position: 973473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974688:1
position: 974688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:973473-974688:1:exon

LOC115638971
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638971
product: uncharacterized LOC115638971, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003997548.1
SIO_010081: LOC115638971
subclass of: SO_0000673
so part of: LOC115638971
location: join(973473..974224,974276..974371,974421..974688)
location: region:973473-974688:1
so has part: feature:973473-974224:1:exon
so has part: feature:974276-974371:1:exon
so has part: feature:974421-974688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:973473-974224:1:exon

position:974224:1
position: 974224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:974276-974371:1:exon

position:974276:1
position: 974276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974371:1
position: 974371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:974421-974688:1:exon

position:974421:1
position: 974421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115638971
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638971
product: uncharacterized LOC115638971, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003997549.1
SIO_010081: LOC115638971
subclass of: SO_0000673
so part of: LOC115638971
location: join(973473..974077,974225..974371,974421..974688)
location: region:973473-974688:1
so has part: feature:973473-974077:1:exon
so has part: feature:974225-974371:1:exon
so has part: feature:974421-974688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:973473-974077:1:exon

position:974077:1
position: 974077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:974225-974371:1:exon

position:974225:1
position: 974225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:974421-974688:1:exon

VPS25
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: VPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1009104..1019256)
location: region:1009104-1019256:-1
so has part: feature:1009104-1019256:-1:exon
subclass of: SO_0000010

115638973
type: Gene
SIO_000068: ncbigene

position:1009104:-1
position: 1009104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019256:-1
position: 1019256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009104-1019256:-1:exon

VPS25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: VPS25
product: vacuolar protein sorting 25 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_030541175.1
SIO_010081: VPS25
subclass of: SO_0000673
so part of: VPS25
location: complement(join(1009104..1009817,1010408..1010483,1011156..1011244,1011859..1011912,1016432..1016577,1019160..1019256))
location: region:1009104-1019256:-1
so has part: feature:1019160-1019256:-1:exon
so has part: feature:1016432-1016577:-1:exon
so has part: feature:1011859-1011912:-1:exon
so has part: feature:1011156-1011244:-1:exon
so has part: feature:1010408-1010483:-1:exon
so has part: feature:1009104-1009817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1019160-1019256:-1:exon

position:1019160:-1
position: 1019160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1016432-1016577:-1:exon

position:1016432:-1
position: 1016432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016577:-1
position: 1016577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1011859-1011912:-1:exon

position:1011859:-1
position: 1011859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011912:-1
position: 1011912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1011156-1011244:-1:exon

position:1011156:-1
position: 1011156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011244:-1
position: 1011244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1010408-1010483:-1:exon

position:1010408:-1
position: 1010408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010483:-1
position: 1010483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1009104-1009817:-1:exon

position:1009817:-1
position: 1009817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: VPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein-sorting-associated protein 25
translation: MSFEWPWQYRFPPFFTLQPNVDTRQKQMTAWCSLVLSYCRINKQYTMTVMEAQESPLFNNRKLQRKLPMESIQVVLEELRKKGNLEWLDKNKSSFLIMWRRPEEWGKLIYQWVSKNGLTNSVFTLYELSNGDDTENEEFHGLEESMLLRALQALQQEHRAEIITLDDGRGVKFF
SIO_010081: VPS25
subclass of: SO_0000673
so part of: VPS25
location: complement(join(1009705..1009817,1010408..1010483,1011156..1011244,1011859..1011912,1016432..1016577,1019160..1019206))
location: region:1009705-1019206:-1
so has part: feature:1019160-1019206:-1:exon
so has part: feature:1016432-1016577:-1:exon
so has part: feature:1011859-1011912:-1:exon
so has part: feature:1011156-1011244:-1:exon
so has part: feature:1010408-1010483:-1:exon
so has part: feature:1009705-1009817:-1:exon

XP_030397035.1
type: Protein
SIO_000068: ncbiprotein

position:1009705:-1
position: 1009705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019206:-1
position: 1019206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019160-1019206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1016432-1016577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011859-1011912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1011156-1011244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1010408-1010483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1009705-1009817:-1:exon

RAMP2
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: RAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1023208..1031404)
location: region:1023208-1031404:-1
so has part: feature:1023208-1031404:-1:exon
subclass of: SO_0000010

115639173
type: Gene
SIO_000068: ncbigene

position:1023208:-1
position: 1023208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031404:-1
position: 1031404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023208-1031404:-1:exon

RAMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RAMP2
product: receptor activity modifying protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030541624.1
SIO_010081: RAMP2
subclass of: SO_0000673
so part of: RAMP2
location: complement(join(1023208..1024471,1026279..1026381,1028237..1028365,1031149..1031404))
location: region:1023208-1031404:-1
so has part: feature:1031149-1031404:-1:exon
so has part: feature:1028237-1028365:-1:exon
so has part: feature:1026279-1026381:-1:exon
so has part: feature:1023208-1024471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1031149-1031404:-1:exon

position:1031149:-1
position: 1031149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028237-1028365:-1:exon

position:1028237:-1
position: 1028237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028365:-1
position: 1028365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1026279-1026381:-1:exon

position:1026279:-1
position: 1026279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026381:-1
position: 1026381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1023208-1024471:-1:exon

position:1024471:-1
position: 1024471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor activity-modifying protein 2
translation: MALCRQTGSGRLCPGLLLLLLWAALGSELHPAGTATPPGANESLAELQNQTVIEEPENLLLNLTADEKYNLIAYMCWANFSHWMMNVTRVQLCEWRVISRPYSDLRHCLETFAEEQNYSYPNSIAEECIVQSHRTYFLNCTQEHPMFLDPPEDVLLALIVTPICLIPFLVTLVVRRSKDGKMQS
SIO_010081: RAMP2
subclass of: SO_0000673
so part of: RAMP2
location: complement(join(1024216..1024471,1026279..1026381,1028237..1028365,1031149..1031215))
location: region:1024216-1031215:-1
so has part: feature:1031149-1031215:-1:exon
so has part: feature:1028237-1028365:-1:exon
so has part: feature:1026279-1026381:-1:exon
so has part: feature:1024216-1024471:-1:exon

XP_030397484.1
type: Protein
SIO_000068: ncbiprotein

position:1024216:-1
position: 1024216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031215:-1
position: 1031215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031149-1031215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1028237-1028365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026279-1026381:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024216-1024471:-1:exon

LOC115638882
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1046450..1052949)
location: region:1046450-1052949:-1
so has part: feature:1046450-1052949:-1:exon
subclass of: SO_0000010

115638882
type: Gene
SIO_000068: ncbigene

position:1046450:-1
position: 1046450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052949:-1
position: 1052949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046450-1052949:-1:exon

LOC115638882
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638882
product: receptor activity-modifying protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540912.1
SIO_010081: LOC115638882
subclass of: SO_0000673
so part of: LOC115638882
location: complement(join(1046450..1046814,1047881..1048022,1048739..1048799,1049235..1049273,1052881..1052949))
location: region:1046450-1052949:-1
so has part: feature:1052881-1052949:-1:exon
so has part: feature:1049235-1049273:-1:exon
so has part: feature:1048739-1048799:-1:exon
so has part: feature:1047881-1048022:-1:exon
so has part: feature:1046450-1046814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052881-1052949:-1:exon

position:1052881:-1
position: 1052881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049235-1049273:-1:exon

position:1049235:-1
position: 1049235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049273:-1
position: 1049273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1048739-1048799:-1:exon

position:1048739:-1
position: 1048739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048799:-1
position: 1048799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1047881-1048022:-1:exon

position:1047881:-1
position: 1047881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048022:-1
position: 1048022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1046450-1046814:-1:exon

position:1046814:-1
position: 1046814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638882
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638882
product: receptor activity-modifying protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540911.1
SIO_010081: LOC115638882
subclass of: SO_0000673
so part of: LOC115638882
location: complement(join(1046450..1046814,1047881..1048022,1048773..1048799,1049235..1049273,1050751..1051042))
location: region:1046450-1051042:-1
so has part: feature:1050751-1051042:-1:exon
so has part: feature:1049235-1049273:-1:exon
so has part: feature:1048773-1048799:-1:exon
so has part: feature:1047881-1048022:-1:exon
so has part: feature:1046450-1046814:-1:exon

position:1051042:-1
position: 1051042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1050751-1051042:-1:exon

position:1050751:-1
position: 1050751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049235-1049273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1048773-1048799:-1:exon

position:1048773:-1
position: 1048773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1047881-1048022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1046450-1046814:-1:exon

LOC115638882
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor activity-modifying protein 1-like isoform X1
translation: MPVQPRHHLCYWLLIPLLQWGCGELTYGDLEDESHYLYLEEDGPFTEEGRSAHCRDTYLEWISLYCWTTFHATVMATPERSRCQWEQISRTYSDLSNCTVLMAEALSCPWPSPALDSFFLQIHMEYFTNCTMPASPQPGQPPLGPVLAMAAMPACLTPLLVALTLRKAREAEPKPDRPLPAAPSVLNRQRVSSHAVLGTNGKGRESV
SIO_010081: LOC115638882
subclass of: SO_0000673
so part of: LOC115638882
location: complement(join(1046460..1046814,1047881..1048022,1048773..1048799,1049235..1049273,1050751..1050811))
location: region:1046460-1050811:-1
so has part: feature:1050751-1050811:-1:exon
so has part: feature:1049235-1049273:-1:exon
so has part: feature:1048773-1048799:-1:exon
so has part: feature:1047881-1048022:-1:exon
so has part: feature:1046460-1046814:-1:exon

XP_030396771.1
type: Protein
SIO_000068: ncbiprotein

position:1046460:-1
position: 1046460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050811:-1
position: 1050811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1050751-1050811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049235-1049273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1048773-1048799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1047881-1048022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1046460-1046814:-1:exon

LOC115638882
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor activity-modifying protein 1-like isoform X2
translation: MKVITCIWRRTVSDARLHPSRPGPFTEEGRSAHCRDTYLEWISLYCWTTFHATVMATPERSRCQWEQISRTYSDLSNCTVLMAEALSCPWPSPALDSFFLQIHMEYFTNCTMPASPQPGQPPLGPVLAMAAMPACLTPLLVALTLRKAREAEPKPDRPLPAAPSVLNRQRVSSHAVLGTNGKGRESV
SIO_010081: LOC115638882
subclass of: SO_0000673
so part of: LOC115638882
location: complement(join(1046460..1046814,1047881..1048022,1048739..1048799,1049235..1049240))
location: region:1046460-1049240:-1
so has part: feature:1049235-1049240:-1:exon
so has part: feature:1048739-1048799:-1:exon
so has part: feature:1047881-1048022:-1:exon
so has part: feature:1046460-1046814:-1:exon

XP_030396772.1
type: Protein
SIO_000068: ncbiprotein

position:1049240:-1
position: 1049240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049235-1049240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048739-1048799:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1047881-1048022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046460-1046814:-1:exon

EZH1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1052981..1082078
location: region:1052981-1082078:1
so has part: feature:1052981-1082078:1:exon
subclass of: SO_0000010

115638881
type: Gene
SIO_000068: ncbigene

position:1052981:1
position: 1052981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082078:1
position: 1082078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052981-1082078:1:exon

EZH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: EZH1
product: enhancer of zeste 1 polycomb repressive complex 2 subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030540909.1
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: join(1052981..1053059,1061069..1061189,1061781..1061909,1062237..1062356,1065279..1065399,1066118..1066291,1067032..1067134,1068272..1068435,1069329..1069438,1070108..1070288,1070865..1071061,1072342..1072433,1072998..1073038,1073544..1073669,1075704..1075882,1076501..1076596,1077374..1077455,1078826..1078906,1079219..1079303,1079827..1082078)
location: region:1052981-1082078:1
so has part: feature:1052981-1053059:1:exon
so has part: feature:1061069-1061189:1:exon
so has part: feature:1061781-1061909:1:exon
so has part: feature:1062237-1062356:1:exon
so has part: feature:1065279-1065399:1:exon
so has part: feature:1066118-1066291:1:exon
so has part: feature:1067032-1067134:1:exon
so has part: feature:1068272-1068435:1:exon
so has part: feature:1069329-1069438:1:exon
so has part: feature:1070108-1070288:1:exon
so has part: feature:1070865-1071061:1:exon
so has part: feature:1072342-1072433:1:exon
so has part: feature:1072998-1073038:1:exon
so has part: feature:1073544-1073669:1:exon
so has part: feature:1075704-1075882:1:exon
so has part: feature:1076501-1076596:1:exon
so has part: feature:1077374-1077455:1:exon
so has part: feature:1078826-1078906:1:exon
so has part: feature:1079219-1079303:1:exon
so has part: feature:1079827-1082078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052981-1053059:1:exon

position:1053059:1
position: 1053059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061069-1061189:1:exon

position:1061069:1
position: 1061069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061189:1
position: 1061189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1061781-1061909:1:exon

position:1061781:1
position: 1061781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061909:1
position: 1061909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1062237-1062356:1:exon

position:1062237:1
position: 1062237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062356:1
position: 1062356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1065279-1065399:1:exon

position:1065279:1
position: 1065279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065399:1
position: 1065399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1066118-1066291:1:exon

position:1066118:1
position: 1066118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066291:1
position: 1066291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1067032-1067134:1:exon

position:1067032:1
position: 1067032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067134:1
position: 1067134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1068272-1068435:1:exon

position:1068272:1
position: 1068272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068435:1
position: 1068435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1069329-1069438:1:exon

position:1069329:1
position: 1069329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069438:1
position: 1069438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1070108-1070288:1:exon

position:1070108:1
position: 1070108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070288:1
position: 1070288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1070865-1071061:1:exon

position:1070865:1
position: 1070865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071061:1
position: 1071061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1072342-1072433:1:exon

position:1072342:1
position: 1072342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072433:1
position: 1072433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1072998-1073038:1:exon

position:1072998:1
position: 1072998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073038:1
position: 1073038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1073544-1073669:1:exon

position:1073544:1
position: 1073544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073669:1
position: 1073669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1075704-1075882:1:exon

position:1075704:1
position: 1075704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075882:1
position: 1075882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1076501-1076596:1:exon

position:1076501:1
position: 1076501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076596:1
position: 1076596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1077374-1077455:1:exon

position:1077374:1
position: 1077374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077455:1
position: 1077455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1078826-1078906:1:exon

position:1078826:1
position: 1078826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078906:1
position: 1078906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1079219-1079303:1:exon

position:1079219:1
position: 1079219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079303:1
position: 1079303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1079827-1082078:1:exon

position:1079827:1
position: 1079827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EZH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: EZH1
product: enhancer of zeste 1 polycomb repressive complex 2 subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030540907.1
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: join(1058464..1058532,1061069..1061189,1061781..1061909,1062237..1062356,1065279..1065399,1066118..1066291,1067032..1067134,1068272..1068435,1069329..1069438,1070108..1070288,1070865..1071061,1072342..1072433,1072998..1073038,1073544..1073669,1075704..1075882,1076501..1076596,1077374..1077455,1078826..1078906,1079219..1079303,1079827..1082078)
location: region:1058464-1082078:1
so has part: feature:1058464-1058532:1:exon
so has part: feature:1061069-1061189:1:exon
so has part: feature:1061781-1061909:1:exon
so has part: feature:1062237-1062356:1:exon
so has part: feature:1065279-1065399:1:exon
so has part: feature:1066118-1066291:1:exon
so has part: feature:1067032-1067134:1:exon
so has part: feature:1068272-1068435:1:exon
so has part: feature:1069329-1069438:1:exon
so has part: feature:1070108-1070288:1:exon
so has part: feature:1070865-1071061:1:exon
so has part: feature:1072342-1072433:1:exon
so has part: feature:1072998-1073038:1:exon
so has part: feature:1073544-1073669:1:exon
so has part: feature:1075704-1075882:1:exon
so has part: feature:1076501-1076596:1:exon
so has part: feature:1077374-1077455:1:exon
so has part: feature:1078826-1078906:1:exon
so has part: feature:1079219-1079303:1:exon
so has part: feature:1079827-1082078:1:exon

position:1058464:1
position: 1058464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058464-1058532:1:exon

position:1058532:1
position: 1058532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061069-1061189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1061781-1061909:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1062237-1062356:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065279-1065399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1066118-1066291:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1067032-1067134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1068272-1068435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069329-1069438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1070108-1070288:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1070865-1071061:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072342-1072433:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072998-1073038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1073544-1073669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1075704-1075882:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1076501-1076596:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1077374-1077455:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1078826-1078906:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1079219-1079303:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1079827-1082078:1:exon

EZH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: EZH1
product: enhancer of zeste 1 polycomb repressive complex 2 subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030540910.1
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: join(1058464..1058532,1061069..1061189,1061781..1061909,1062237..1062356,1065279..1065399,1066118..1066291,1067032..1067134,1068272..1068435,1069347..1069438,1070108..1070288,1070865..1071061,1072342..1072433,1072998..1073038,1073544..1073669,1075704..1075882,1076501..1076596,1077374..1077455,1078826..1078906,1079219..1079303,1079827..1082078)
location: region:1058464-1082078:1
so has part: feature:1058464-1058532:1:exon
so has part: feature:1061069-1061189:1:exon
so has part: feature:1061781-1061909:1:exon
so has part: feature:1062237-1062356:1:exon
so has part: feature:1065279-1065399:1:exon
so has part: feature:1066118-1066291:1:exon
so has part: feature:1067032-1067134:1:exon
so has part: feature:1068272-1068435:1:exon
so has part: feature:1069347-1069438:1:exon
so has part: feature:1070108-1070288:1:exon
so has part: feature:1070865-1071061:1:exon
so has part: feature:1072342-1072433:1:exon
so has part: feature:1072998-1073038:1:exon
so has part: feature:1073544-1073669:1:exon
so has part: feature:1075704-1075882:1:exon
so has part: feature:1076501-1076596:1:exon
so has part: feature:1077374-1077455:1:exon
so has part: feature:1078826-1078906:1:exon
so has part: feature:1079219-1079303:1:exon
so has part: feature:1079827-1082078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1058464-1058532:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061069-1061189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1061781-1061909:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1062237-1062356:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065279-1065399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1066118-1066291:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1067032-1067134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1068272-1068435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069347-1069438:1:exon

position:1069347:1
position: 1069347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1070108-1070288:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1070865-1071061:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072342-1072433:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072998-1073038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1073544-1073669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1075704-1075882:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1076501-1076596:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1077374-1077455:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1078826-1078906:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1079219-1079303:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1079827-1082078:1:exon

EZH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase EZH1 isoform X1
translation: MDEAKMEIPTPPTSKCIIYWKRKVKSEYMRLRQLKRFQANMGAKALFVANFAKVQEKTQILNEDWKKLRVQPVPLMKPGTGHPFLKQCTVESNFPGFPNQTIFMRSLNTVALVPIMYSWSPLQQNFMVEDETVLCNIPYMGDEVKEEDETFIEELINNYDGKVHGEEEMITGSVLISDAVFLELVEALNQYSDEEEEGLNDSEGKQEDGKEELPVTRKRKRTTMEGNKKCPKKQFPNDMIFSAISSMFPENGFPEDMKERYRELTEQSDPNVLPPQCTPNIDGPCAKSVQREQSLHSFHTLFCRRCFKYDCFLHRGLYFSAFHATPNVYKRKNREIKIEPDPCGTDCFLWLEGAKEFAVLHNPRSKCSGRRRRRHHVVSASSSNPSSSSVAETREGDSDRDTGNDWASSSSEANSRSQTPTKQKGSPASSQLFVMEAPQEPVEWTGAEESLFRVLHGTYFNNFCSIARLLGTKTCKQVFQFAVKESLVMKLPTSELMNPSQKKKRKHRLWAAHCRKIQLKKDNSPTQVYNYQPCDHPDHPCDSSCPCIMTQNFCEKFCQCNPDCQNRFPGCRCKTQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDII
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: join(1058522..1058532,1061069..1061189,1061781..1061909,1062237..1062356,1065279..1065399,1066118..1066291,1067032..1067134,1068272..1068435,1069329..1069438,1070108..1070288,1070865..1071061,1072342..1072433,1072998..1073038,1073544..1073669,1075704..1075882,1076501..1076596,1077374..1077455,1078826..1078906,1079219..1079303,1079827..1079887)
location: region:1058522-1079887:1
so has part: feature:1058522-1058532:1:exon
so has part: feature:1061069-1061189:1:exon
so has part: feature:1061781-1061909:1:exon
so has part: feature:1062237-1062356:1:exon
so has part: feature:1065279-1065399:1:exon
so has part: feature:1066118-1066291:1:exon
so has part: feature:1067032-1067134:1:exon
so has part: feature:1068272-1068435:1:exon
so has part: feature:1069329-1069438:1:exon
so has part: feature:1070108-1070288:1:exon
so has part: feature:1070865-1071061:1:exon
so has part: feature:1072342-1072433:1:exon
so has part: feature:1072998-1073038:1:exon
so has part: feature:1073544-1073669:1:exon
so has part: feature:1075704-1075882:1:exon
so has part: feature:1076501-1076596:1:exon
so has part: feature:1077374-1077455:1:exon
so has part: feature:1078826-1078906:1:exon
so has part: feature:1079219-1079303:1:exon
so has part: feature:1079827-1079887:1:exon

XP_030396767.1
type: Protein
SIO_000068: ncbiprotein

position:1058522:1
position: 1058522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079887:1
position: 1079887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058522-1058532:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061069-1061189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1061781-1061909:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1062237-1062356:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065279-1065399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1066118-1066291:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1067032-1067134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1068272-1068435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069329-1069438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1070108-1070288:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1070865-1071061:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072342-1072433:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072998-1073038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1073544-1073669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1075704-1075882:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1076501-1076596:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1077374-1077455:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1078826-1078906:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1079219-1079303:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1079827-1079887:1:exon

EZH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase EZH1 isoform X3
translation: MDEAKMEIPTPPTSKCIIYWKRKVKSEYMRLRQLKRFQANMGAKALFVANFAKVQEKTQILNEDWKKLRVQPVPLMKPGTGHPFLKQCTVESNFPGFPNQTIFMRSLNTVALVPIMYSWSPLQQNFMVEDETVLCNIPYMGDEVKEEDETFIEELINNYDGKVHGEEEMITGSVLISDAVFLELVEALNQYSDEEEEGLNDSEGKQEDGKEELPVTRKRKRTTMEGNKKCPKKQFPNDMIFSAISSMFPENGFPEDMKERYRELTEQSDPNVLPPQCTPNIDGPCAKSVQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNVYKRKNREIKIEPDPCGTDCFLWLEGAKEFAVLHNPRSKCSGRRRRRHHVVSASSSNPSSSSVAETREGDSDRDTGNDWASSSSEANSRSQTPTKQKGSPASSQLFVMEAPQEPVEWTGAEESLFRVLHGTYFNNFCSIARLLGTKTCKQVFQFAVKESLVMKLPTSELMNPSQKKKRKHRLWAAHCRKIQLKKDNSPTQVYNYQPCDHPDHPCDSSCPCIMTQNFCEKFCQCNPDCQNRFPGCRCKTQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDII
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: join(1058522..1058532,1061069..1061189,1061781..1061909,1062237..1062356,1065279..1065399,1066118..1066291,1067032..1067134,1068272..1068435,1069347..1069438,1070108..1070288,1070865..1071061,1072342..1072433,1072998..1073038,1073544..1073669,1075704..1075882,1076501..1076596,1077374..1077455,1078826..1078906,1079219..1079303,1079827..1079887)
location: region:1058522-1079887:1
so has part: feature:1058522-1058532:1:exon
so has part: feature:1061069-1061189:1:exon
so has part: feature:1061781-1061909:1:exon
so has part: feature:1062237-1062356:1:exon
so has part: feature:1065279-1065399:1:exon
so has part: feature:1066118-1066291:1:exon
so has part: feature:1067032-1067134:1:exon
so has part: feature:1068272-1068435:1:exon
so has part: feature:1069347-1069438:1:exon
so has part: feature:1070108-1070288:1:exon
so has part: feature:1070865-1071061:1:exon
so has part: feature:1072342-1072433:1:exon
so has part: feature:1072998-1073038:1:exon
so has part: feature:1073544-1073669:1:exon
so has part: feature:1075704-1075882:1:exon
so has part: feature:1076501-1076596:1:exon
so has part: feature:1077374-1077455:1:exon
so has part: feature:1078826-1078906:1:exon
so has part: feature:1079219-1079303:1:exon
so has part: feature:1079827-1079887:1:exon

XP_030396770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1058522-1058532:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061069-1061189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1061781-1061909:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1062237-1062356:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065279-1065399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1066118-1066291:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1067032-1067134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1068272-1068435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069347-1069438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1070108-1070288:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1070865-1071061:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072342-1072433:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072998-1073038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1073544-1073669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1075704-1075882:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1076501-1076596:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1077374-1077455:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1078826-1078906:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1079219-1079303:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1079827-1079887:1:exon

EZH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase EZH1 isoform X2
translation: MEIPTPPTSKCIIYWKRKVKSEYMRLRQLKRFQANMGAKALFVANFAKVQEKTQILNEDWKKLRVQPVPLMKPGTGHPFLKQCTVESNFPGFPNQTIFMRSLNTVALVPIMYSWSPLQQNFMVEDETVLCNIPYMGDEVKEEDETFIEELINNYDGKVHGEEEMITGSVLISDAVFLELVEALNQYSDEEEEGLNDSEGKQEDGKEELPVTRKRKRTTMEGNKKCPKKQFPNDMIFSAISSMFPENGFPEDMKERYRELTEQSDPNVLPPQCTPNIDGPCAKSVQREQSLHSFHTLFCRRCFKYDCFLHRGLYFSAFHATPNVYKRKNREIKIEPDPCGTDCFLWLEGAKEFAVLHNPRSKCSGRRRRRHHVVSASSSNPSSSSVAETREGDSDRDTGNDWASSSSEANSRSQTPTKQKGSPASSQLFVMEAPQEPVEWTGAEESLFRVLHGTYFNNFCSIARLLGTKTCKQVFQFAVKESLVMKLPTSELMNPSQKKKRKHRLWAAHCRKIQLKKDNSPTQVYNYQPCDHPDHPCDSSCPCIMTQNFCEKFCQCNPDCQNRFPGCRCKTQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDII
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: join(1061073..1061189,1061781..1061909,1062237..1062356,1065279..1065399,1066118..1066291,1067032..1067134,1068272..1068435,1069329..1069438,1070108..1070288,1070865..1071061,1072342..1072433,1072998..1073038,1073544..1073669,1075704..1075882,1076501..1076596,1077374..1077455,1078826..1078906,1079219..1079303,1079827..1079887)
location: region:1061073-1079887:1
so has part: feature:1061073-1061189:1:exon
so has part: feature:1061781-1061909:1:exon
so has part: feature:1062237-1062356:1:exon
so has part: feature:1065279-1065399:1:exon
so has part: feature:1066118-1066291:1:exon
so has part: feature:1067032-1067134:1:exon
so has part: feature:1068272-1068435:1:exon
so has part: feature:1069329-1069438:1:exon
so has part: feature:1070108-1070288:1:exon
so has part: feature:1070865-1071061:1:exon
so has part: feature:1072342-1072433:1:exon
so has part: feature:1072998-1073038:1:exon
so has part: feature:1073544-1073669:1:exon
so has part: feature:1075704-1075882:1:exon
so has part: feature:1076501-1076596:1:exon
so has part: feature:1077374-1077455:1:exon
so has part: feature:1078826-1078906:1:exon
so has part: feature:1079219-1079303:1:exon
so has part: feature:1079827-1079887:1:exon

XP_030396769.1
type: Protein
SIO_000068: ncbiprotein

position:1061073:1
position: 1061073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061073-1061189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061781-1061909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062237-1062356:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065279-1065399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1066118-1066291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067032-1067134:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1068272-1068435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069329-1069438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1070108-1070288:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1070865-1071061:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072342-1072433:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072998-1073038:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1073544-1073669:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1075704-1075882:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1076501-1076596:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1077374-1077455:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1078826-1078906:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1079219-1079303:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1079827-1079887:1:exon

CNTNAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: CNTNAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1081821..1119539)
location: region:1081821-1119539:-1
so has part: feature:1081821-1119539:-1:exon
subclass of: SO_0000010

115638880
type: Gene
SIO_000068: ncbigene

position:1081821:-1
position: 1081821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119539:-1
position: 1119539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081821-1119539:-1:exon

CNTNAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CNTNAP1
product: contactin associated protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540906.1
SIO_010081: CNTNAP1
subclass of: SO_0000673
so part of: CNTNAP1
location: complement(join(1081821..1084082,1084402..1084449,1084829..1085059,1085508..1085601,1086951..1087078,1087354..1087581,1088300..1088539,1091581..1091799,1092916..1093083,1093222..1093349,1094455..1094611,1094923..1095126,1095784..1095903,1095996..1096102,1096591..1096762,1096847..1096996,1097597..1097858,1108083..1108226,1108701..1108885,1109263..1109466,1111549..1111696,1112308..1112501,1112859..1112960,1119456..1119539))
location: region:1081821-1119539:-1
so has part: feature:1119456-1119539:-1:exon
so has part: feature:1112859-1112960:-1:exon
so has part: feature:1112308-1112501:-1:exon
so has part: feature:1111549-1111696:-1:exon
so has part: feature:1109263-1109466:-1:exon
so has part: feature:1108701-1108885:-1:exon
so has part: feature:1108083-1108226:-1:exon
so has part: feature:1097597-1097858:-1:exon
so has part: feature:1096847-1096996:-1:exon
so has part: feature:1096591-1096762:-1:exon
so has part: feature:1095996-1096102:-1:exon
so has part: feature:1095784-1095903:-1:exon
so has part: feature:1094923-1095126:-1:exon
so has part: feature:1094455-1094611:-1:exon
so has part: feature:1093222-1093349:-1:exon
so has part: feature:1092916-1093083:-1:exon
so has part: feature:1091581-1091799:-1:exon
so has part: feature:1088300-1088539:-1:exon
so has part: feature:1087354-1087581:-1:exon
so has part: feature:1086951-1087078:-1:exon
so has part: feature:1085508-1085601:-1:exon
so has part: feature:1084829-1085059:-1:exon
so has part: feature:1084402-1084449:-1:exon
so has part: feature:1081821-1084082:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1119456-1119539:-1:exon

position:1119456:-1
position: 1119456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1112859-1112960:-1:exon

position:1112859:-1
position: 1112859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112960:-1
position: 1112960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1112308-1112501:-1:exon

position:1112308:-1
position: 1112308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112501:-1
position: 1112501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1111549-1111696:-1:exon

position:1111549:-1
position: 1111549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111696:-1
position: 1111696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1109263-1109466:-1:exon

position:1109263:-1
position: 1109263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109466:-1
position: 1109466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1108701-1108885:-1:exon

position:1108701:-1
position: 1108701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108885:-1
position: 1108885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1108083-1108226:-1:exon

position:1108083:-1
position: 1108083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108226:-1
position: 1108226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1097597-1097858:-1:exon

position:1097597:-1
position: 1097597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097858:-1
position: 1097858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1096847-1096996:-1:exon

position:1096847:-1
position: 1096847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096996:-1
position: 1096996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1096591-1096762:-1:exon

position:1096591:-1
position: 1096591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096762:-1
position: 1096762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1095996-1096102:-1:exon

position:1095996:-1
position: 1095996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096102:-1
position: 1096102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1095784-1095903:-1:exon

position:1095784:-1
position: 1095784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095903:-1
position: 1095903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1094923-1095126:-1:exon

position:1094923:-1
position: 1094923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095126:-1
position: 1095126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1094455-1094611:-1:exon

position:1094455:-1
position: 1094455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1094611:-1
position: 1094611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1093222-1093349:-1:exon

position:1093222:-1
position: 1093222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093349:-1
position: 1093349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1092916-1093083:-1:exon

position:1092916:-1
position: 1092916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093083:-1
position: 1093083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1091581-1091799:-1:exon

position:1091581:-1
position: 1091581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091799:-1
position: 1091799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1088300-1088539:-1:exon

position:1088300:-1
position: 1088300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088539:-1
position: 1088539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1087354-1087581:-1:exon

position:1087354:-1
position: 1087354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087581:-1
position: 1087581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1086951-1087078:-1:exon

position:1086951:-1
position: 1086951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087078:-1
position: 1087078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1085508-1085601:-1:exon

position:1085508:-1
position: 1085508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085601:-1
position: 1085601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1084829-1085059:-1:exon

position:1084829:-1
position: 1084829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085059:-1
position: 1085059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1084402-1084449:-1:exon

position:1084402:-1
position: 1084402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084449:-1
position: 1084449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1081821-1084082:-1:exon

position:1084082:-1
position: 1084082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTNAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CNTNAP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: contactin-associated protein 1
translation: MDTRLLCLLLAACAAVLPLDLRRCPPQHCYDELVAPLYSSSIGASSRYNIFYSSSFARLHSSSGWSPDPSDKQPWLQIDLMQKHKINAVATQGTYNTYDWVTHYIVLYGDHPSSWKPFFQLGSNWTFFGNVNESGVVRHDLHYPILARYIRIIPRAWNPRGKIGLRLGLYGCPYWSDVLYFDGDDAISYRFRGKTVRTSQDVFTFSFKTMEREGLLMHGEGSQGDYITVELKQAQLVLHISLGSSPLYSSQGHTTVTVGSLLDDQHWHSLRIDRHGHHVNLSLDGEVKRFRCNGDFQQLDLDTELFFGGVISQKNQSLVYRQNFRGCMENIFFNRVNIADLARRRASNIRFEGHVSHYCQDQPYMPITFAGINNYLQVPGIPRRNRLSVSFKFRSWDTVGLLLYTSFAEHLGSLEMVLSNGQVNVSIAQSGRKKLEFAAGYRLNDGFWHMVELVARDGSAVITIDDNDGAEFRVAHPFQLRTGTQYFFGGCPKPAAITGCLSNQTAFHGCLQSISVDAQPVELDLLRQERLGKYSNVFFNMCSITDRCTPNLCEHGGRCLQSWDDFTCVCDLTGYKGETCHKSLYKESCDAYRLSGKTSGNFTIDPDGSGPLKPFTVYCDIREDRAWTIVRHNRHYATRVRGSSVDRPFLGAVEYWNASWAEVAALANGSEYCEQHLEFSCYSSRLLNTPYGPPVSFWMGRHDQRHYYWGGSPPGVQRCACGLDKNCVDPKYFCNCDADHAQWRTDKGLLNFVDHLPVTQVVVGDTNRSQSEAQFLLGPLRCYGDRNTWNTVSFNKGASLVFPTFLANHSLDISFYFRTTALSGVFLENWGCRNYIRIELNTTRDVVFAYDIGNGDENLTVRSPVPFSDDEWHQVKAEINVKLARLRVDKMPWVVRLAPPQSYVRLEFDRPLYVGSAEHRLHPFLGCLRALRVNGQTLNLEGKANETEGVRVNCTGYCQYPRVPCLNSGLCVERYSHYTCNCSLSAFDGPFCNRDIGAYFEPGTWVRYNILPAELSAARAFASILSQPLPGYNLTSEELSFSFRTSTAPAVLLYVSSFRRDYVAVLIREDGSLQLRYQLGTSPYVFPLTTAPVTDGRPHRINITRINRTLYTQVDYFPVTEQQFSLFVDRKLDSPKNLYLGRVMETGMIDPEIQKYNTPGFSGCLSGVKFNSILPFKAIFRPSGRPAPYRIKGELVESNCASMPRSIMDIPPEMDPWYLGTEFPHVHDDGWLGIITGFVTFLLLLLAGLLLLLYLHHHRYKGSYLTNEPKAVQDYHGPGKPLXPTQGPEPAPDPGGGERRIAAGCRGRKGLMPQTLAPPVRCWEGNECCRTKGAKQPRTARTQLPLGRLLLPPSTAAPLPMGRAHVFLLELH
SIO_010081: CNTNAP1
subclass of: SO_0000673
so part of: CNTNAP1
location: complement(join(1083677..1084082,1084402..1084449,1084829..1085059,1085508..1085601,1086951..1087078,1087354..1087581,1088300..1088539,1091581..1091799,1092916..1093083,1093222..1093349,1094455..1094611,1094923..1095126,1095784..1095903,1095996..1096102,1096591..1096762,1096847..1096996,1097597..1097858,1108083..1108226,1108701..1108885,1109263..1109466,1111549..1111696,1112308..1112501,1112859..1112960,1119456..1119534))
location: region:1083677-1119534:-1
so has part: feature:1119456-1119534:-1:exon
so has part: feature:1112859-1112960:-1:exon
so has part: feature:1112308-1112501:-1:exon
so has part: feature:1111549-1111696:-1:exon
so has part: feature:1109263-1109466:-1:exon
so has part: feature:1108701-1108885:-1:exon
so has part: feature:1108083-1108226:-1:exon
so has part: feature:1097597-1097858:-1:exon
so has part: feature:1096847-1096996:-1:exon
so has part: feature:1096591-1096762:-1:exon
so has part: feature:1095996-1096102:-1:exon
so has part: feature:1095784-1095903:-1:exon
so has part: feature:1094923-1095126:-1:exon
so has part: feature:1094455-1094611:-1:exon
so has part: feature:1093222-1093349:-1:exon
so has part: feature:1092916-1093083:-1:exon
so has part: feature:1091581-1091799:-1:exon
so has part: feature:1088300-1088539:-1:exon
so has part: feature:1087354-1087581:-1:exon
so has part: feature:1086951-1087078:-1:exon
so has part: feature:1085508-1085601:-1:exon
so has part: feature:1084829-1085059:-1:exon
so has part: feature:1084402-1084449:-1:exon
so has part: feature:1083677-1084082:-1:exon

XP_030396766.1
type: Protein
SIO_000068: ncbiprotein

position:1083677:-1
position: 1083677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119534:-1
position: 1119534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1119456-1119534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1112859-1112960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1112308-1112501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1111549-1111696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1109263-1109466:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1108701-1108885:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1108083-1108226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097597-1097858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1096847-1096996:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1096591-1096762:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095996-1096102:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1095784-1095903:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1094923-1095126:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094455-1094611:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1093222-1093349:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1092916-1093083:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1091581-1091799:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1088300-1088539:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1087354-1087581:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1086951-1087078:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1085508-1085601:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1084829-1085059:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1084402-1084449:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1083677-1084082:-1:exon

CCR10
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: CCR10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1124658..1134265
location: region:1124658-1134265:1
so has part: feature:1124658-1134265:1:exon
subclass of: SO_0000010

115639218
type: Gene
SIO_000068: ncbigene

position:1124658:1
position: 1124658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134265:1
position: 1134265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1124658-1134265:1:exon

CCR10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CCR10
product: C-C motif chemokine receptor 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030541703.1
SIO_010081: CCR10
subclass of: SO_0000673
so part of: CCR10
location: join(1124658..1124668,1126070..1126154,1132693..1132833,1133102..1134265)
location: region:1124658-1134265:1
so has part: feature:1124658-1124668:1:exon
so has part: feature:1126070-1126154:1:exon
so has part: feature:1132693-1132833:1:exon
so has part: feature:1133102-1134265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1124658-1124668:1:exon

position:1124668:1
position: 1124668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1126070-1126154:1:exon

position:1126070:1
position: 1126070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126154:1
position: 1126154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1132693-1132833:1:exon

position:1132693:1
position: 1132693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132833:1
position: 1132833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1133102-1134265:1:exon

position:1133102:1
position: 1133102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCR10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CCR10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C chemokine receptor type 10
translation: MAGRRTLAMPPTPLPLALALALAPAGCHSGKSCCAVLLCGVVLLCAVAVQCRVVLLCGVTALLCCVVVQCCVAVLCCAALCGTMLCRYAVPRCAAKLLPNNNNDVLPSQTFSPWAAEPPVTTDYYYEDGEYPEGGSPLPELCEKGTVQSFARTYQPAVYLLLSALGVAGNGLVLLTHARYRQAHSMTDVCLLHLAVADLLLLLTLPFAVAGVLQGWLLGTDACRTLQGFYALNFYSGFLFLTCISVDRYMAIVRAPAACRLRPRARCYGWLAAGLAWLLSTLLALPQFVYSRAEDHEDVQLCRVLFPASISRAAQGATNLAQVILGFVLPFLVMVSCYAAMARTLLAARSFQRHKALRVILALVLVFVALQLPYSLVVLLDTADMLGSREMSCAQSRHKDLALVVTSGLAFARCCLNPVLYAFVGVRFRKELRLLASDAGCVGRAQAGQRPSPRRLALLSTWLDMV
SIO_010081: CCR10
subclass of: SO_0000673
so part of: CCR10
location: join(1124658..1124668,1126070..1126154,1132693..1132833,1133102..1134265)
location: region:1124658-1134265:1
so has part: feature:1124658-1124668:1:exon
so has part: feature:1126070-1126154:1:exon
so has part: feature:1132693-1132833:1:exon
so has part: feature:1133102-1134265:1:exon

XP_030397563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1124658-1124668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1126070-1126154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132693-1132833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133102-1134265:1:exon

PLEKHH3
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: PLEKHH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1142524..1164374
location: region:1142524-1164374:1
so has part: feature:1142524-1164374:1:exon
subclass of: SO_0000010

115638944
type: Gene
SIO_000068: ncbigene

position:1142524:1
position: 1142524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164374:1
position: 1164374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142524-1164374:1:exon

PLEKHH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PLEKHH3
product: pleckstrin homology, MyTH4 and FERM domain containing H3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030541104.1
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1142524..1142717,1149020..1149075,1155369..1155457,1156110..1156304,1156697..1156854,1157156..1157279,1158221..1158518,1159918..1160125,1160516..1160652,1161030..1161150,1161511..1161960,1162388..1162579,1162929..1164374)
location: region:1142524-1164374:1
so has part: feature:1142524-1142717:1:exon
so has part: feature:1149020-1149075:1:exon
so has part: feature:1155369-1155457:1:exon
so has part: feature:1156110-1156304:1:exon
so has part: feature:1156697-1156854:1:exon
so has part: feature:1157156-1157279:1:exon
so has part: feature:1158221-1158518:1:exon
so has part: feature:1159918-1160125:1:exon
so has part: feature:1160516-1160652:1:exon
so has part: feature:1161030-1161150:1:exon
so has part: feature:1161511-1161960:1:exon
so has part: feature:1162388-1162579:1:exon
so has part: feature:1162929-1164374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1142524-1142717:1:exon

position:1142717:1
position: 1142717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1149020-1149075:1:exon

position:1149020:1
position: 1149020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149075:1
position: 1149075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1155369-1155457:1:exon

position:1155369:1
position: 1155369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155457:1
position: 1155457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1156110-1156304:1:exon

position:1156110:1
position: 1156110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156304:1
position: 1156304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1156697-1156854:1:exon

position:1156697:1
position: 1156697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156854:1
position: 1156854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1157156-1157279:1:exon

position:1157156:1
position: 1157156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157279:1
position: 1157279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1158221-1158518:1:exon

position:1158221:1
position: 1158221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158518:1
position: 1158518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1159918-1160125:1:exon

position:1159918:1
position: 1159918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160125:1
position: 1160125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1160516-1160652:1:exon

position:1160516:1
position: 1160516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160652:1
position: 1160652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1161030-1161150:1:exon

position:1161030:1
position: 1161030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161150:1
position: 1161150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1161511-1161960:1:exon

position:1161511:1
position: 1161511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161960:1
position: 1161960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1162388-1162579:1:exon

position:1162388:1
position: 1162388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162579:1
position: 1162579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1162929-1164374:1:exon

position:1162929:1
position: 1162929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLEKHH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PLEKHH3
product: pleckstrin homology, MyTH4 and FERM domain containing H3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030541105.1
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1142524..1142717,1149020..1149075,1155369..1155457,1156110..1156304,1156697..1156854,1157156..1157279,1158221..1158518,1159918..1160125,1160516..1160643,1161030..1161150,1161511..1161960,1162388..1162579,1162929..1164374)
location: region:1142524-1164374:1
so has part: feature:1142524-1142717:1:exon
so has part: feature:1149020-1149075:1:exon
so has part: feature:1155369-1155457:1:exon
so has part: feature:1156110-1156304:1:exon
so has part: feature:1156697-1156854:1:exon
so has part: feature:1157156-1157279:1:exon
so has part: feature:1158221-1158518:1:exon
so has part: feature:1159918-1160125:1:exon
so has part: feature:1160516-1160643:1:exon
so has part: feature:1161030-1161150:1:exon
so has part: feature:1161511-1161960:1:exon
so has part: feature:1162388-1162579:1:exon
so has part: feature:1162929-1164374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1142524-1142717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149020-1149075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1155369-1155457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1156110-1156304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1156697-1156854:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157156-1157279:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1158221-1158518:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1159918-1160125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1160516-1160643:1:exon

position:1160643:1
position: 1160643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1161030-1161150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1161511-1161960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1162388-1162579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1162929-1164374:1:exon

PLEKHH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PLEKHH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family H member 3 isoform X1
translation: MPFPGGLWWLVCCRQGFTLLRRDYGEPDKEPDGEAEEESSFELRSKGAQGPLQLSLTQPVRTSSGSERSLPVSEEMRSLITEKGPGPVEEEPDAIVKGWLQREVRGGVKGPWIRPRKYWFVLTQDSLDYYSSSEVGARRLGTLVLTSLCSVLWPDKQTYKETGYWSVTVFGRKHCYRLYTEHLNEAVHWVCAVQKVIHSKAPVQTPTQLLMHDIEENRGNPEILEQIYRCNPILRYTSSPLYAPLLPFPYGCSDQSAPSPRGYMTLRDEAVKLFNSLQQLESERDPVPLIQGILQTCLDLQPLVDEIYCQLVKQTTAPPVPGGLGNLRYWQLLTCMSCTFLPSPPVLRYLHFHLGRTESEFPGSEMAEYGRFIVAALDKTQVRECVPSLDEIVVLIQRQDMLCTVHCPGTSACTVAISSHTTAEEVARELVARLGLSQSPNVFALYEQSRNHERPVGRAMLVADVLTRFENLAGEERTQDSTWRLCFKHYGFLDTENVPRDSVEFALLFEQAHEMVIRGYVPTSEDTLQSLAALRLQTLNSDFSTHAPVPRPEELFPVHALHSRLRASCQGLPRCPGARLRAGLLAGTLPWGHSLAKQQAEQDQKLRGRLREEGASVMAAIVDRWKLLQGMDRAEAMAAYLALVREWPGFGSTLFDVDFHTSLEGSCPQRLWLGVGAKAVSLYKPGEAEPFDSFCYSRISSFRVSDSSTFHLSVGDRDLLFECPRVDEIVQLLHTYLTSLGTRQTPLREELADSCHPGDSLDSGLPPLQQRLCPANAPWRGQPSAGSFPI
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1142571..1142717,1149020..1149075,1155369..1155457,1156110..1156304,1156697..1156854,1157156..1157279,1158221..1158518,1159918..1160125,1160516..1160652,1161030..1161150,1161511..1161960,1162388..1162579,1162929..1163126)
location: region:1142571-1163126:1
so has part: feature:1142571-1142717:1:exon
so has part: feature:1149020-1149075:1:exon
so has part: feature:1155369-1155457:1:exon
so has part: feature:1156110-1156304:1:exon
so has part: feature:1156697-1156854:1:exon
so has part: feature:1157156-1157279:1:exon
so has part: feature:1158221-1158518:1:exon
so has part: feature:1159918-1160125:1:exon
so has part: feature:1160516-1160652:1:exon
so has part: feature:1161030-1161150:1:exon
so has part: feature:1161511-1161960:1:exon
so has part: feature:1162388-1162579:1:exon
so has part: feature:1162929-1163126:1:exon

XP_030396964.1
type: Protein
SIO_000068: ncbiprotein

position:1142571:1
position: 1142571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163126:1
position: 1163126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142571-1142717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149020-1149075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1155369-1155457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1156110-1156304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1156697-1156854:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157156-1157279:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1158221-1158518:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1159918-1160125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1160516-1160652:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1161030-1161150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1161511-1161960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1162388-1162579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1162929-1163126:1:exon

PLEKHH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PLEKHH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family H member 3 isoform X2
translation: MPFPGGLWWLVCCRQGFTLLRRDYGEPDKEPDGEAEEESSFELRSKGAQGPLQLSLTQPVRTSSGSERSLPVSEEMRSLITEKGPGPVEEEPDAIVKGWLQREVRGGVKGPWIRPRKYWFVLTQDSLDYYSSSEVGARRLGTLVLTSLCSVLWPDKQTYKETGYWSVTVFGRKHCYRLYTEHLNEAVHWVCAVQKVIHSKAPVQTPTQLLMHDIEENRGNPEILEQIYRCNPILRYTSSPLYAPLLPFPYGCSDQSAPSPRGYMTLRDEAVKLFNSLQQLESERDPVPLIQGILQTCLDLQPLVDEIYCQLVKQTTAPPVPGGLGNLRYWQLLTCMSCTFLPSPPVLRYLHFHLGRTESEFPGSEMAEYGRFIVAALDKTQVRECVPSLDEIVVLIQRQDMLCTVHCPGTSACTVAISSHTTAEEVARELVARLGLSQSPNVFALYEQSRNHERPVGRAMLVADVLTSLAGEERTQDSTWRLCFKHYGFLDTENVPRDSVEFALLFEQAHEMVIRGYVPTSEDTLQSLAALRLQTLNSDFSTHAPVPRPEELFPVHALHSRLRASCQGLPRCPGARLRAGLLAGTLPWGHSLAKQQAEQDQKLRGRLREEGASVMAAIVDRWKLLQGMDRAEAMAAYLALVREWPGFGSTLFDVDFHTSLEGSCPQRLWLGVGAKAVSLYKPGEAEPFDSFCYSRISSFRVSDSSTFHLSVGDRDLLFECPRVDEIVQLLHTYLTSLGTRQTPLREELADSCHPGDSLDSGLPPLQQRLCPANAPWRGQPSAGSFPI
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1142571..1142717,1149020..1149075,1155369..1155457,1156110..1156304,1156697..1156854,1157156..1157279,1158221..1158518,1159918..1160125,1160516..1160643,1161030..1161150,1161511..1161960,1162388..1162579,1162929..1163126)
location: region:1142571-1163126:1
so has part: feature:1142571-1142717:1:exon
so has part: feature:1149020-1149075:1:exon
so has part: feature:1155369-1155457:1:exon
so has part: feature:1156110-1156304:1:exon
so has part: feature:1156697-1156854:1:exon
so has part: feature:1157156-1157279:1:exon
so has part: feature:1158221-1158518:1:exon
so has part: feature:1159918-1160125:1:exon
so has part: feature:1160516-1160643:1:exon
so has part: feature:1161030-1161150:1:exon
so has part: feature:1161511-1161960:1:exon
so has part: feature:1162388-1162579:1:exon
so has part: feature:1162929-1163126:1:exon

XP_030396965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1142571-1142717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149020-1149075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1155369-1155457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1156110-1156304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1156697-1156854:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157156-1157279:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1158221-1158518:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1159918-1160125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1160516-1160643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1161030-1161150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1161511-1161960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1162388-1162579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1162929-1163126:1:exon

PLEKHH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PLEKHH3
product: pleckstrin homology, MyTH4 and FERM domain containing H3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030541106.1
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1147962..1148057,1149020..1149075,1155369..1155457,1156110..1156304,1156697..1156854,1157156..1157279,1158221..1158518,1159918..1160125,1160516..1160652,1161030..1161150,1161511..1161960,1162388..1162579,1162929..1164374)
location: region:1147962-1164374:1
so has part: feature:1147962-1148057:1:exon
so has part: feature:1149020-1149075:1:exon
so has part: feature:1155369-1155457:1:exon
so has part: feature:1156110-1156304:1:exon
so has part: feature:1156697-1156854:1:exon
so has part: feature:1157156-1157279:1:exon
so has part: feature:1158221-1158518:1:exon
so has part: feature:1159918-1160125:1:exon
so has part: feature:1160516-1160652:1:exon
so has part: feature:1161030-1161150:1:exon
so has part: feature:1161511-1161960:1:exon
so has part: feature:1162388-1162579:1:exon
so has part: feature:1162929-1164374:1:exon

position:1147962:1
position: 1147962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147962-1148057:1:exon

position:1148057:1
position: 1148057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1149020-1149075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1155369-1155457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1156110-1156304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1156697-1156854:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157156-1157279:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1158221-1158518:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1159918-1160125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1160516-1160652:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1161030-1161150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1161511-1161960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1162388-1162579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1162929-1164374:1:exon

PLEKHH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PLEKHH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family H member 3 isoform X3
translation: MRSLITEKGPGPVEEEPDAIVKGWLQREVRGGVKGPWIRPRKYWFVLTQDSLDYYSSSEVGARRLGTLVLTSLCSVLWPDKQTYKETGYWSVTVFGRKHCYRLYTEHLNEAVHWVCAVQKVIHSKAPVQTPTQLLMHDIEENRGNPEILEQIYRCNPILRYTSSPLYAPLLPFPYGCSDQSAPSPRGYMTLRDEAVKLFNSLQQLESERDPVPLIQGILQTCLDLQPLVDEIYCQLVKQTTAPPVPGGLGNLRYWQLLTCMSCTFLPSPPVLRYLHFHLGRTESEFPGSEMAEYGRFIVAALDKTQVRECVPSLDEIVVLIQRQDMLCTVHCPGTSACTVAISSHTTAEEVARELVARLGLSQSPNVFALYEQSRNHERPVGRAMLVADVLTRFENLAGEERTQDSTWRLCFKHYGFLDTENVPRDSVEFALLFEQAHEMVIRGYVPTSEDTLQSLAALRLQTLNSDFSTHAPVPRPEELFPVHALHSRLRASCQGLPRCPGARLRAGLLAGTLPWGHSLAKQQAEQDQKLRGRLREEGASVMAAIVDRWKLLQGMDRAEAMAAYLALVREWPGFGSTLFDVDFHTSLEGSCPQRLWLGVGAKAVSLYKPGEAEPFDSFCYSRISSFRVSDSSTFHLSVGDRDLLFECPRVDEIVQLLHTYLTSLGTRQTPLREELADSCHPGDSLDSGLPPLQQRLCPANAPWRGQPSAGSFPI
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: join(1155391..1155457,1156110..1156304,1156697..1156854,1157156..1157279,1158221..1158518,1159918..1160125,1160516..1160652,1161030..1161150,1161511..1161960,1162388..1162579,1162929..1163126)
location: region:1155391-1163126:1
so has part: feature:1155391-1155457:1:exon
so has part: feature:1156110-1156304:1:exon
so has part: feature:1156697-1156854:1:exon
so has part: feature:1157156-1157279:1:exon
so has part: feature:1158221-1158518:1:exon
so has part: feature:1159918-1160125:1:exon
so has part: feature:1160516-1160652:1:exon
so has part: feature:1161030-1161150:1:exon
so has part: feature:1161511-1161960:1:exon
so has part: feature:1162388-1162579:1:exon
so has part: feature:1162929-1163126:1:exon

XP_030396966.1
type: Protein
SIO_000068: ncbiprotein

position:1155391:1
position: 1155391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155391-1155457:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1156110-1156304:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156697-1156854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1157156-1157279:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1158221-1158518:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1159918-1160125:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1160516-1160652:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1161030-1161150:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1161511-1161960:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1162388-1162579:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1162929-1163126:1:exon

TUBG1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: TUBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1166740..1176958)
location: region:1166740-1176958:-1
so has part: feature:1166740-1176958:-1:exon
subclass of: SO_0000010

115638945
type: Gene
SIO_000068: ncbigene

position:1166740:-1
position: 1166740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176958:-1
position: 1176958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166740-1176958:-1:exon

TUBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TUBG1
product: tubulin gamma 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030541107.1
SIO_010081: TUBG1
subclass of: SO_0000673
so part of: TUBG1
location: complement(join(1166740..1167498,1168396..1168557,1169087..1169239,1171183..1171332,1171841..1171927,1172654..1172780,1173360..1173439,1174820..1174888,1175171..1175338,1176232..1176344,1176798..1176958))
location: region:1166740-1176958:-1
so has part: feature:1176798-1176958:-1:exon
so has part: feature:1176232-1176344:-1:exon
so has part: feature:1175171-1175338:-1:exon
so has part: feature:1174820-1174888:-1:exon
so has part: feature:1173360-1173439:-1:exon
so has part: feature:1172654-1172780:-1:exon
so has part: feature:1171841-1171927:-1:exon
so has part: feature:1171183-1171332:-1:exon
so has part: feature:1169087-1169239:-1:exon
so has part: feature:1168396-1168557:-1:exon
so has part: feature:1166740-1167498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1176798-1176958:-1:exon

position:1176798:-1
position: 1176798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176232-1176344:-1:exon

position:1176232:-1
position: 1176232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176344:-1
position: 1176344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175171-1175338:-1:exon

position:1175171:-1
position: 1175171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175338:-1
position: 1175338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1174820-1174888:-1:exon

position:1174820:-1
position: 1174820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174888:-1
position: 1174888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1173360-1173439:-1:exon

position:1173360:-1
position: 1173360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173439:-1
position: 1173439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1172654-1172780:-1:exon

position:1172654:-1
position: 1172654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172780:-1
position: 1172780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1171841-1171927:-1:exon

position:1171841:-1
position: 1171841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171927:-1
position: 1171927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1171183-1171332:-1:exon

position:1171183:-1
position: 1171183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171332:-1
position: 1171332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1169087-1169239:-1:exon

position:1169087:-1
position: 1169087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169239:-1
position: 1169239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1168396-1168557:-1:exon

position:1168396:-1
position: 1168396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168557:-1
position: 1168557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1166740-1167498:-1:exon

position:1167498:-1
position: 1167498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TUBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin gamma-1 chain
translation: MLSSAGRGREEAKGAARSRAAAAEMPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYANLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTNISSLFERTCRQYDKLRKREAFLEQFRKEDIFKDNFDELDNSREIVQQLIDEYHAATRPDYISWGTQEQ
SIO_010081: TUBG1
subclass of: SO_0000673
so part of: TUBG1
location: complement(join(1167301..1167498,1168396..1168557,1169087..1169239,1171183..1171332,1171841..1171927,1172654..1172780,1173360..1173439,1174820..1174888,1175171..1175338,1176232..1176344,1176798..1176918))
location: region:1167301-1176918:-1
so has part: feature:1176798-1176918:-1:exon
so has part: feature:1176232-1176344:-1:exon
so has part: feature:1175171-1175338:-1:exon
so has part: feature:1174820-1174888:-1:exon
so has part: feature:1173360-1173439:-1:exon
so has part: feature:1172654-1172780:-1:exon
so has part: feature:1171841-1171927:-1:exon
so has part: feature:1171183-1171332:-1:exon
so has part: feature:1169087-1169239:-1:exon
so has part: feature:1168396-1168557:-1:exon
so has part: feature:1167301-1167498:-1:exon

XP_030396967.1
type: Protein
SIO_000068: ncbiprotein

position:1167301:-1
position: 1167301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176918:-1
position: 1176918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176798-1176918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176232-1176344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175171-1175338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1174820-1174888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173360-1173439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1172654-1172780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1171841-1171927:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1171183-1171332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1169087-1169239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1168396-1168557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1167301-1167498:-1:exon

RETREG3
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: RETREG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1177006..1197615
location: region:1177006-1197615:1
so has part: feature:1177006-1197615:1:exon
subclass of: SO_0000010

115638946
type: Gene
SIO_000068: ncbigene

position:1177006:1
position: 1177006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197615:1
position: 1197615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177006-1197615:1:exon

RETREG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RETREG3
product: reticulophagy regulator family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030541111.1
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: join(1177006..1177082,1183294..1183400,1185554..1185584,1187545..1187671,1188510..1188594,1189036..1189173,1189727..1189806,1190428..1190560,1192555..1193002,1195458..1197615)
location: region:1177006-1197615:1
so has part: feature:1177006-1177082:1:exon
so has part: feature:1183294-1183400:1:exon
so has part: feature:1185554-1185584:1:exon
so has part: feature:1187545-1187671:1:exon
so has part: feature:1188510-1188594:1:exon
so has part: feature:1189036-1189173:1:exon
so has part: feature:1189727-1189806:1:exon
so has part: feature:1190428-1190560:1:exon
so has part: feature:1192555-1193002:1:exon
so has part: feature:1195458-1197615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1177006-1177082:1:exon

position:1177082:1
position: 1177082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1183294-1183400:1:exon

position:1183294:1
position: 1183294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183400:1
position: 1183400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1185554-1185584:1:exon

position:1185554:1
position: 1185554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185584:1
position: 1185584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1187545-1187671:1:exon

position:1187545:1
position: 1187545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187671:1
position: 1187671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1188510-1188594:1:exon

position:1188510:1
position: 1188510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188594:1
position: 1188594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1189036-1189173:1:exon

position:1189036:1
position: 1189036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189173:1
position: 1189173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1189727-1189806:1:exon

position:1189727:1
position: 1189727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189806:1
position: 1189806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1190428-1190560:1:exon

position:1190428:1
position: 1190428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190560:1
position: 1190560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1192555-1193002:1:exon

position:1192555:1
position: 1192555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193002:1
position: 1193002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1195458-1197615:1:exon

position:1195458:1
position: 1195458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RETREG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RETREG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulophagy regulator 3 isoform X2
translation: MRGRKTPLFRIARWLLPAFPHFLALTSLRLVFLVAFGLIIIVCLDQWKNKIWPEIKVARSDESDNESWGYVHPQLLSVPELCHHLADGWVTGVTFLRNLFVFKRQNPGKFCLLVCGVFTFLAVLGRYIPGLLLSYLMLLFILLWPLAVYHRLGQRMYTKLEPALQRLDFSVRGYMMSKQRVKQLRQQALNQEPADAGTDSEEELAAFCPKLDDSAVAKELTISDSEHSDAEVSYTENGTFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINPEVTGIDDEDDTSIGIPSLAYRSQGMEDLRHPYDQEEAVPALLLGALPSAHNLTNNLAGFVTRGMIQLALSEASQPGPVCSDNLQRGTKTYLRTSSSDLDTDAEGDDFELLDQSELIQLDPAGSRGQLFEENRFSLCQTVQLLHE
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: join(1177021..1177082,1183294..1183400,1185554..1185584,1187545..1187671,1188510..1188594,1189036..1189173,1189727..1189806,1190428..1190560,1192555..1193002,1195458..1195515)
location: region:1177021-1195515:1
so has part: feature:1177021-1177082:1:exon
so has part: feature:1183294-1183400:1:exon
so has part: feature:1185554-1185584:1:exon
so has part: feature:1187545-1187671:1:exon
so has part: feature:1188510-1188594:1:exon
so has part: feature:1189036-1189173:1:exon
so has part: feature:1189727-1189806:1:exon
so has part: feature:1190428-1190560:1:exon
so has part: feature:1192555-1193002:1:exon
so has part: feature:1195458-1195515:1:exon

XP_030396971.1
type: Protein
SIO_000068: ncbiprotein

position:1177021:1
position: 1177021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195515:1
position: 1195515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177021-1177082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1183294-1183400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185554-1185584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187545-1187671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188510-1188594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189036-1189173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189727-1189806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190428-1190560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192555-1193002:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195458-1195515:1:exon

RETREG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RETREG3
product: reticulophagy regulator family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030541108.1
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: join(1177197..1177405,1183294..1183400,1185554..1185584,1187545..1187671,1188510..1188594,1189036..1189173,1189727..1189806,1190428..1190560,1192555..1193002,1195458..1197615)
location: region:1177197-1197615:1
so has part: feature:1177197-1177405:1:exon
so has part: feature:1183294-1183400:1:exon
so has part: feature:1185554-1185584:1:exon
so has part: feature:1187545-1187671:1:exon
so has part: feature:1188510-1188594:1:exon
so has part: feature:1189036-1189173:1:exon
so has part: feature:1189727-1189806:1:exon
so has part: feature:1190428-1190560:1:exon
so has part: feature:1192555-1193002:1:exon
so has part: feature:1195458-1197615:1:exon

position:1177197:1
position: 1177197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177197-1177405:1:exon

position:1177405:1
position: 1177405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1183294-1183400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185554-1185584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187545-1187671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188510-1188594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189036-1189173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189727-1189806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190428-1190560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192555-1193002:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195458-1197615:1:exon

RETREG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RETREG3
product: reticulophagy regulator family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030541109.1
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: join(1177197..1177405,1183294..1183400,1185554..1185584,1187545..1187671,1188510..1188594,1189036..1189173,1189727..1189806,1190428..1190560,1192555..1193002,1195458..1195543,1196573..1197615)
location: region:1177197-1197615:1
so has part: feature:1177197-1177405:1:exon
so has part: feature:1183294-1183400:1:exon
so has part: feature:1185554-1185584:1:exon
so has part: feature:1187545-1187671:1:exon
so has part: feature:1188510-1188594:1:exon
so has part: feature:1189036-1189173:1:exon
so has part: feature:1189727-1189806:1:exon
so has part: feature:1190428-1190560:1:exon
so has part: feature:1192555-1193002:1:exon
so has part: feature:1195458-1195543:1:exon
so has part: feature:1196573-1197615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1177197-1177405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1183294-1183400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185554-1185584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187545-1187671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188510-1188594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189036-1189173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189727-1189806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190428-1190560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192555-1193002:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195458-1195543:1:exon

position:1195543:1
position: 1195543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1196573-1197615:1:exon

position:1196573:1
position: 1196573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RETREG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RETREG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulophagy regulator 3 isoform X1
translation: MEAAAGGSQAGGPGERERRVRALSAALRARLGPYEPLLSALQAALVWERPGRGALGWAGAHGAFCFLALTSLRLVFLVAFGLIIIVCLDQWKNKIWPEIKVARSDESDNESWGYVHPQLLSVPELCHHLADGWVTGVTFLRNLFVFKRQNPGKFCLLVCGVFTFLAVLGRYIPGLLLSYLMLLFILLWPLAVYHRLGQRMYTKLEPALQRLDFSVRGYMMSKQRVKQLRQQALNQEPADAGTDSEEELAAFCPKLDDSAVAKELTISDSEHSDAEVSYTENGTFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINPEVTGIDDEDDTSIGIPSLAYRSQGMEDLRHPYDQEEAVPALLLGALPSAHNLTNNLAGFVTRGMIQLALSEASQPGPVCSDNLQRGTKTYLRTSSSDLDTDAEGDDFELLDQSELIQLDPAGSRGQLFEENRFSLCQTVQLLHE
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: join(1177212..1177405,1183294..1183400,1185554..1185584,1187545..1187671,1188510..1188594,1189036..1189173,1189727..1189806,1190428..1190560,1192555..1193002,1195458..1195515)
location: region:1177212-1195515:1
so has part: feature:1177212-1177405:1:exon
so has part: feature:1183294-1183400:1:exon
so has part: feature:1185554-1185584:1:exon
so has part: feature:1187545-1187671:1:exon
so has part: feature:1188510-1188594:1:exon
so has part: feature:1189036-1189173:1:exon
so has part: feature:1189727-1189806:1:exon
so has part: feature:1190428-1190560:1:exon
so has part: feature:1192555-1193002:1:exon
so has part: feature:1195458-1195515:1:exon

XP_030396968.1
type: Protein
SIO_000068: ncbiprotein

position:1177212:1
position: 1177212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177212-1177405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1183294-1183400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185554-1185584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187545-1187671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188510-1188594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189036-1189173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189727-1189806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190428-1190560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192555-1193002:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195458-1195515:1:exon

RETREG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RETREG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulophagy regulator 3 isoform X1
translation: MEAAAGGSQAGGPGERERRVRALSAALRARLGPYEPLLSALQAALVWERPGRGALGWAGAHGAFCFLALTSLRLVFLVAFGLIIIVCLDQWKNKIWPEIKVARSDESDNESWGYVHPQLLSVPELCHHLADGWVTGVTFLRNLFVFKRQNPGKFCLLVCGVFTFLAVLGRYIPGLLLSYLMLLFILLWPLAVYHRLGQRMYTKLEPALQRLDFSVRGYMMSKQRVKQLRQQALNQEPADAGTDSEEELAAFCPKLDDSAVAKELTISDSEHSDAEVSYTENGTFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINPEVTGIDDEDDTSIGIPSLAYRSQGMEDLRHPYDQEEAVPALLLGALPSAHNLTNNLAGFVTRGMIQLALSEASQPGPVCSDNLQRGTKTYLRTSSSDLDTDAEGDDFELLDQSELIQLDPAGSRGQLFEENRFSLCQTVQLLHE
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: join(1177212..1177405,1183294..1183400,1185554..1185584,1187545..1187671,1188510..1188594,1189036..1189173,1189727..1189806,1190428..1190560,1192555..1193002,1195458..1195515)
location: region:1177212-1195515:1
so has part: feature:1177212-1177405:1:exon
so has part: feature:1183294-1183400:1:exon
so has part: feature:1185554-1185584:1:exon
so has part: feature:1187545-1187671:1:exon
so has part: feature:1188510-1188594:1:exon
so has part: feature:1189036-1189173:1:exon
so has part: feature:1189727-1189806:1:exon
so has part: feature:1190428-1190560:1:exon
so has part: feature:1192555-1193002:1:exon
so has part: feature:1195458-1195515:1:exon

XP_030396969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1177212-1177405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1183294-1183400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185554-1185584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187545-1187671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188510-1188594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189036-1189173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189727-1189806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190428-1190560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192555-1193002:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195458-1195515:1:exon

RETREG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RETREG3
product: reticulophagy regulator family member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030541113.1
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: join(1177514..1177574,1183294..1183400,1185554..1185584,1187545..1187671,1188510..1188594,1189036..1189173,1189727..1189806,1190428..1190560,1192555..1193002,1195458..1197615)
location: region:1177514-1197615:1
so has part: feature:1177514-1177574:1:exon
so has part: feature:1183294-1183400:1:exon
so has part: feature:1185554-1185584:1:exon
so has part: feature:1187545-1187671:1:exon
so has part: feature:1188510-1188594:1:exon
so has part: feature:1189036-1189173:1:exon
so has part: feature:1189727-1189806:1:exon
so has part: feature:1190428-1190560:1:exon
so has part: feature:1192555-1193002:1:exon
so has part: feature:1195458-1197615:1:exon

position:1177514:1
position: 1177514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177514-1177574:1:exon

position:1177574:1
position: 1177574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1183294-1183400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185554-1185584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187545-1187671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188510-1188594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189036-1189173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189727-1189806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190428-1190560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192555-1193002:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195458-1197615:1:exon

RETREG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RETREG3
product: reticulophagy regulator family member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030541112.1
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: join(1177629..1177698,1183294..1183400,1185554..1185584,1187545..1187671,1188510..1188594,1189036..1189173,1189727..1189806,1190428..1190560,1192555..1193002,1195458..1197615)
location: region:1177629-1197615:1
so has part: feature:1177629-1177698:1:exon
so has part: feature:1183294-1183400:1:exon
so has part: feature:1185554-1185584:1:exon
so has part: feature:1187545-1187671:1:exon
so has part: feature:1188510-1188594:1:exon
so has part: feature:1189036-1189173:1:exon
so has part: feature:1189727-1189806:1:exon
so has part: feature:1190428-1190560:1:exon
so has part: feature:1192555-1193002:1:exon
so has part: feature:1195458-1197615:1:exon

position:1177629:1
position: 1177629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177629-1177698:1:exon

position:1177698:1
position: 1177698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1183294-1183400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185554-1185584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187545-1187671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188510-1188594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189036-1189173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189727-1189806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190428-1190560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192555-1193002:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195458-1197615:1:exon

RETREG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RETREG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulophagy regulator 3 isoform X3
translation: MLLFILLWPLAVYHRLGQRMYTKLEPALQRLDFSVRGYMMSKQRVKQLRQQALNQEPADAGTDSEEELAAFCPKLDDSAVAKELTISDSEHSDAEVSYTENGTFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINPEVTGIDDEDDTSIGIPSLAYRSQGMEDLRHPYDQEEAVPALLLGALPSAHNLTNNLAGFVTRGMIQLALSEASQPGPVCSDNLQRGTKTYLRTSSSDLDTDAEGDDFELLDQSELIQLDPAGSRGQLFEENRFSLCQTVQLLHE
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: join(1188591..1188594,1189036..1189173,1189727..1189806,1190428..1190560,1192555..1193002,1195458..1195515)
location: region:1188591-1195515:1
so has part: feature:1188591-1188594:1:exon
so has part: feature:1189036-1189173:1:exon
so has part: feature:1189727-1189806:1:exon
so has part: feature:1190428-1190560:1:exon
so has part: feature:1192555-1193002:1:exon
so has part: feature:1195458-1195515:1:exon

XP_030396972.1
type: Protein
SIO_000068: ncbiprotein

position:1188591:1
position: 1188591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1188591-1188594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189036-1189173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1189727-1189806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1190428-1190560:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1192555-1193002:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195458-1195515:1:exon

RETREG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RETREG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulophagy regulator 3 isoform X3
translation: MLLFILLWPLAVYHRLGQRMYTKLEPALQRLDFSVRGYMMSKQRVKQLRQQALNQEPADAGTDSEEELAAFCPKLDDSAVAKELTISDSEHSDAEVSYTENGTFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINPEVTGIDDEDDTSIGIPSLAYRSQGMEDLRHPYDQEEAVPALLLGALPSAHNLTNNLAGFVTRGMIQLALSEASQPGPVCSDNLQRGTKTYLRTSSSDLDTDAEGDDFELLDQSELIQLDPAGSRGQLFEENRFSLCQTVQLLHE
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: join(1188591..1188594,1189036..1189173,1189727..1189806,1190428..1190560,1192555..1193002,1195458..1195515)
location: region:1188591-1195515:1
so has part: feature:1188591-1188594:1:exon
so has part: feature:1189036-1189173:1:exon
so has part: feature:1189727-1189806:1:exon
so has part: feature:1190428-1190560:1:exon
so has part: feature:1192555-1193002:1:exon
so has part: feature:1195458-1195515:1:exon

XP_030396973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1188591-1188594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189036-1189173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1189727-1189806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1190428-1190560:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1192555-1193002:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195458-1195515:1:exon

PSMC3IP
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: PSMC3IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1197753..1210162
location: region:1197753-1210162:1
so has part: feature:1197753-1210162:1:exon
subclass of: SO_0000010

115638948
type: Gene
SIO_000068: ncbigene

position:1197753:1
position: 1197753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1210162:1
position: 1210162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197753-1210162:1:exon

PSMC3IP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PSMC3IP
product: PSMC3 interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030541116.1
SIO_010081: PSMC3IP
subclass of: SO_0000673
so part of: PSMC3IP
location: join(1197753..1198028,1198920..1199026,1199484..1199573,1200265..1200376,1200608..1200753,1201552..1201605,1202507..1202566,1209316..1210162)
location: region:1197753-1210162:1
so has part: feature:1197753-1198028:1:exon
so has part: feature:1198920-1199026:1:exon
so has part: feature:1199484-1199573:1:exon
so has part: feature:1200265-1200376:1:exon
so has part: feature:1200608-1200753:1:exon
so has part: feature:1201552-1201605:1:exon
so has part: feature:1202507-1202566:1:exon
so has part: feature:1209316-1210162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1197753-1198028:1:exon

position:1198028:1
position: 1198028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1198920-1199026:1:exon

position:1198920:1
position: 1198920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199026:1
position: 1199026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1199484-1199573:1:exon

position:1199484:1
position: 1199484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199573:1
position: 1199573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1200265-1200376:1:exon

position:1200265:1
position: 1200265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200376:1
position: 1200376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1200608-1200753:1:exon

position:1200608:1
position: 1200608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200753:1
position: 1200753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1201552-1201605:1:exon

position:1201552:1
position: 1201552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201605:1
position: 1201605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1202507-1202566:1:exon

position:1202507:1
position: 1202507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202566:1
position: 1202566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1209316-1210162:1:exon

position:1209316:1
position: 1209316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMC3IP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PSMC3IP
product: PSMC3 interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030541117.1
SIO_010081: PSMC3IP
subclass of: SO_0000673
so part of: PSMC3IP
location: join(1197761..1198028,1198920..1199026,1199484..1199573,1200265..1200376,1200608..1200753,1201552..1201605,1202507..1202566,1202747..1203297)
location: region:1197761-1203297:1
so has part: feature:1197761-1198028:1:exon
so has part: feature:1198920-1199026:1:exon
so has part: feature:1199484-1199573:1:exon
so has part: feature:1200265-1200376:1:exon
so has part: feature:1200608-1200753:1:exon
so has part: feature:1201552-1201605:1:exon
so has part: feature:1202507-1202566:1:exon
so has part: feature:1202747-1203297:1:exon

position:1197761:1
position: 1197761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1203297:1
position: 1203297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197761-1198028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1198920-1199026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1199484-1199573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1200265-1200376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1200608-1200753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1201552-1201605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1202507-1202566:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1202747-1203297:1:exon

position:1202747:1
position: 1202747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMC3IP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PSMC3IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homologous-pairing protein 2 homolog isoform X1
translation: MSKVRESPAATGGAAAILLRYLRDQNRPHSAQDAFGNLQREHGLGKTAVVKALEQLAQQGKIREKAYGKQKIYFPDQDQFPTMSDSELKALDNEISELSSKVQTLQQSCRHMESELKDLNGSMTTPEMIKEIEELKKDCASYTEKLERIKSAANHVTPEEKEKVYNEKKLYCKEWRRRKRMATELLDAILEGYPKSKKQFFRKNGHRQLWGHMAAPRAQEAETKTDTCSY
SIO_010081: PSMC3IP
subclass of: SO_0000673
so part of: PSMC3IP
location: join(1197995..1198028,1198920..1199026,1199484..1199573,1200265..1200376,1200608..1200753,1201552..1201605,1202507..1202566,1209316..1209405)
location: region:1197995-1209405:1
so has part: feature:1197995-1198028:1:exon
so has part: feature:1198920-1199026:1:exon
so has part: feature:1199484-1199573:1:exon
so has part: feature:1200265-1200376:1:exon
so has part: feature:1200608-1200753:1:exon
so has part: feature:1201552-1201605:1:exon
so has part: feature:1202507-1202566:1:exon
so has part: feature:1209316-1209405:1:exon

XP_030396976.1
type: Protein
SIO_000068: ncbiprotein

position:1197995:1
position: 1197995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209405:1
position: 1209405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197995-1198028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1198920-1199026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1199484-1199573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1200265-1200376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1200608-1200753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1201552-1201605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1202507-1202566:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1209316-1209405:1:exon

PSMC3IP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PSMC3IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homologous-pairing protein 2 homolog isoform X2
translation: MSKVRESPAATGGAAAILLRYLRDQNRPHSAQDAFGNLQREHGLGKTAVVKALEQLAQQGKIREKAYGKQKIYFPDQDQFPTMSDSELKALDNEISELSSKVQTLQQSCRHMESELKDLNGSMTTPEMIKEIEELKKDCASYTEKLERIKSAANHVTPEEKEKVYNEKKLYCKEWRRRKRMATELLDAILEGYPKSKKQFFEEVGIETDEDYNVTLPVAV
SIO_010081: PSMC3IP
subclass of: SO_0000673
so part of: PSMC3IP
location: join(1197995..1198028,1198920..1199026,1199484..1199573,1200265..1200376,1200608..1200753,1201552..1201605,1202507..1202566,1202747..1202806)
location: region:1197995-1202806:1
so has part: feature:1197995-1198028:1:exon
so has part: feature:1198920-1199026:1:exon
so has part: feature:1199484-1199573:1:exon
so has part: feature:1200265-1200376:1:exon
so has part: feature:1200608-1200753:1:exon
so has part: feature:1201552-1201605:1:exon
so has part: feature:1202507-1202566:1:exon
so has part: feature:1202747-1202806:1:exon

XP_030396977.1
type: Protein
SIO_000068: ncbiprotein

position:1202806:1
position: 1202806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197995-1198028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1198920-1199026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1199484-1199573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1200265-1200376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1200608-1200753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1201552-1201605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1202507-1202566:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1202747-1202806:1:exon

MLX
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: MLX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1203653..1212597)
location: region:1203653-1212597:-1
so has part: feature:1203653-1212597:-1:exon
subclass of: SO_0000010

115638947
type: Gene
SIO_000068: ncbigene

position:1203653:-1
position: 1203653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212597:-1
position: 1212597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203653-1212597:-1:exon

MLX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: MLX
product: MAX dimerization protein MLX, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_030541114.1
SIO_010081: MLX
subclass of: SO_0000673
so part of: MLX
location: complement(join(1203653..1205721,1206940..1207141,1207653..1207752,1208480..1208579,1209203..1209309,1210156..1210245,1210812..1210848,1212515..1212597))
location: region:1203653-1212597:-1
so has part: feature:1212515-1212597:-1:exon
so has part: feature:1210812-1210848:-1:exon
so has part: feature:1210156-1210245:-1:exon
so has part: feature:1209203-1209309:-1:exon
so has part: feature:1208480-1208579:-1:exon
so has part: feature:1207653-1207752:-1:exon
so has part: feature:1206940-1207141:-1:exon
so has part: feature:1203653-1205721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1212515-1212597:-1:exon

position:1212515:-1
position: 1212515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1210812-1210848:-1:exon

position:1210812:-1
position: 1210812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210848:-1
position: 1210848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1210156-1210245:-1:exon

position:1210156:-1
position: 1210156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210245:-1
position: 1210245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1209203-1209309:-1:exon

position:1209203:-1
position: 1209203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209309:-1
position: 1209309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1208480-1208579:-1:exon

position:1208480:-1
position: 1208480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208579:-1
position: 1208579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1207653-1207752:-1:exon

position:1207653:-1
position: 1207653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207752:-1
position: 1207752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1206940-1207141:-1:exon

position:1206940:-1
position: 1206940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207141:-1
position: 1207141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1203653-1205721:-1:exon

position:1205721:-1
position: 1205721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MLX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: MLX
product: MAX dimerization protein MLX, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030541115.1
SIO_010081: MLX
subclass of: SO_0000673
so part of: MLX
location: complement(join(1203653..1205756,1206940..1207141,1207653..1207752,1208480..1208579,1209203..1209309,1210156..1210245,1210812..1210848,1212515..1212597))
location: region:1203653-1212597:-1
so has part: feature:1212515-1212597:-1:exon
so has part: feature:1210812-1210848:-1:exon
so has part: feature:1210156-1210245:-1:exon
so has part: feature:1209203-1209309:-1:exon
so has part: feature:1208480-1208579:-1:exon
so has part: feature:1207653-1207752:-1:exon
so has part: feature:1206940-1207141:-1:exon
so has part: feature:1203653-1205756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1212515-1212597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210812-1210848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210156-1210245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209203-1209309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1208480-1208579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207653-1207752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1206940-1207141:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1203653-1205756:-1:exon

position:1205756:-1
position: 1205756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MLX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: MLX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: max-like protein X isoform X1
translation: MAEQTGASPEDPWGKVDSAYSDSGLDPSLFVESTRKGSIVSRANSIGSTSASSVPNTDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKKGYDDLQAIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQNNPNEGKDQVSDQVKFNVFQGIMDSLFQSFNASISVTSFQELSACVFSWIEEHCKPQTLRDIVLGVLHQLKNQLY
SIO_010081: MLX
subclass of: SO_0000673
so part of: MLX
location: complement(join(1205665..1205721,1206940..1207141,1207653..1207752,1208480..1208579,1209203..1209309,1210156..1210245,1210812..1210848,1212515..1212559))
location: region:1205665-1212559:-1
so has part: feature:1212515-1212559:-1:exon
so has part: feature:1210812-1210848:-1:exon
so has part: feature:1210156-1210245:-1:exon
so has part: feature:1209203-1209309:-1:exon
so has part: feature:1208480-1208579:-1:exon
so has part: feature:1207653-1207752:-1:exon
so has part: feature:1206940-1207141:-1:exon
so has part: feature:1205665-1205721:-1:exon

XP_030396974.1
type: Protein
SIO_000068: ncbiprotein

position:1205665:-1
position: 1205665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212559:-1
position: 1212559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1212515-1212559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210812-1210848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210156-1210245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209203-1209309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1208480-1208579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207653-1207752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1206940-1207141:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1205665-1205721:-1:exon

MLX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: MLX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: max-like protein X isoform X2
translation: MAEQTGASPEDPWGKVDSAYSDSGLDPSLFVESTRKGSIVSRANSIGSTSASSVPNTDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKKGYDDLQAIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQNNPNEGKDQVSDQVKFNVFQGIMDSLFQSFNASISVTSFQELSACVFSWIEEHCKPQSD
SIO_010081: MLX
subclass of: SO_0000673
so part of: MLX
location: complement(join(1205748..1205756,1206940..1207141,1207653..1207752,1208480..1208579,1209203..1209309,1210156..1210245,1210812..1210848,1212515..1212559))
location: region:1205748-1212559:-1
so has part: feature:1212515-1212559:-1:exon
so has part: feature:1210812-1210848:-1:exon
so has part: feature:1210156-1210245:-1:exon
so has part: feature:1209203-1209309:-1:exon
so has part: feature:1208480-1208579:-1:exon
so has part: feature:1207653-1207752:-1:exon
so has part: feature:1206940-1207141:-1:exon
so has part: feature:1205748-1205756:-1:exon

XP_030396975.1
type: Protein
SIO_000068: ncbiprotein

position:1205748:-1
position: 1205748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1212515-1212559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210812-1210848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210156-1210245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209203-1209309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1208480-1208579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207653-1207752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1206940-1207141:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1205748-1205756:-1:exon

LOC115639034
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115639034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1222411..1226582)
location: region:1222411-1226582:-1
so has part: feature:1222411-1226582:-1:exon
subclass of: SO_0000010

115639034
type: Gene
SIO_000068: ncbigene

position:1222411:-1
position: 1222411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226582:-1
position: 1226582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222411-1226582:-1:exon

LOC115639034
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115639034
product: coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030541313.1
SIO_010081: LOC115639034
subclass of: SO_0000673
so part of: LOC115639034
location: complement(join(1222411..1222891,1223198..1223299,1224001..1224193,1224437..1224598,1225659..1226582))
location: region:1222411-1226582:-1
so has part: feature:1225659-1226582:-1:exon
so has part: feature:1224437-1224598:-1:exon
so has part: feature:1224001-1224193:-1:exon
so has part: feature:1223198-1223299:-1:exon
so has part: feature:1222411-1222891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225659-1226582:-1:exon

position:1225659:-1
position: 1225659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1224437-1224598:-1:exon

position:1224437:-1
position: 1224437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224598:-1
position: 1224598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1224001-1224193:-1:exon

position:1224001:-1
position: 1224001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224193:-1
position: 1224193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1223198-1223299:-1:exon

position:1223198:-1
position: 1223198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223299:-1
position: 1223299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1222411-1222891:-1:exon

position:1222891:-1
position: 1222891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115639034
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115639034
product: coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030541312.1
SIO_010081: LOC115639034
subclass of: SO_0000673
so part of: LOC115639034
location: complement(join(1222411..1222891,1223198..1223299,1224001..1224193,1224437..1224598,1224898..1224983))
location: region:1222411-1224983:-1
so has part: feature:1224898-1224983:-1:exon
so has part: feature:1224437-1224598:-1:exon
so has part: feature:1224001-1224193:-1:exon
so has part: feature:1223198-1223299:-1:exon
so has part: feature:1222411-1222891:-1:exon

position:1224983:-1
position: 1224983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224898-1224983:-1:exon

position:1224898:-1
position: 1224898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1224437-1224598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224001-1224193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1223198-1223299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1222411-1222891:-1:exon

LOC115639034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115639034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like isoform X2
translation: MLAICIPAPLGWPTYLECESSATEARHLSSCGILATLQPPKRPPAAPAWGLQPPARTFLNLAAPRLGGKRMEYGEARVLGYSMEQMYNVVANVESYQHFVPWCKSSKILSCRKGLTRAELEVGFAPLVERYVSEISLTPQHQIRAVCNDSRIFSHLETLWRFSPGLPGQPDTCTLDFYVSFEFKSILHSHLANLFFDEVVKQMVTAFERWAEKTYGPQTDVHPQKCLQAARCM
SIO_010081: LOC115639034
subclass of: SO_0000673
so part of: LOC115639034
location: complement(join(1222724..1222891,1223198..1223299,1224001..1224193,1224437..1224598,1225659..1225735))
location: region:1222724-1225735:-1
so has part: feature:1225659-1225735:-1:exon
so has part: feature:1224437-1224598:-1:exon
so has part: feature:1224001-1224193:-1:exon
so has part: feature:1223198-1223299:-1:exon
so has part: feature:1222724-1222891:-1:exon

XP_030397173.1
type: Protein
SIO_000068: ncbiprotein

position:1222724:-1
position: 1222724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225735:-1
position: 1225735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225659-1225735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224437-1224598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224001-1224193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1223198-1223299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1222724-1222891:-1:exon

LOC115639034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115639034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like isoform X1
translation: MAGSSSRGAALLRALRGAGSRPRRGDGTRHLSSCGILATLQPPKRPPAAPAWGLQPPARTFLNLAAPRLGGKRMEYGEARVLGYSMEQMYNVVANVESYQHFVPWCKSSKILSCRKGLTRAELEVGFAPLVERYVSEISLTPQHQIRAVCNDSRIFSHLETLWRFSPGLPGQPDTCTLDFYVSFEFKSILHSHLANLFFDEVVKQMVTAFERWAEKTYGPQTDVHPQKCLQAARCM
SIO_010081: LOC115639034
subclass of: SO_0000673
so part of: LOC115639034
location: complement(join(1222724..1222891,1223198..1223299,1224001..1224193,1224437..1224598,1224898..1224983))
location: region:1222724-1224983:-1
so has part: feature:1224898-1224983:-1:exon
so has part: feature:1224437-1224598:-1:exon
so has part: feature:1224001-1224193:-1:exon
so has part: feature:1223198-1223299:-1:exon
so has part: feature:1222724-1222891:-1:exon

XP_030397172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1224898-1224983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224437-1224598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224001-1224193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1223198-1223299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1222724-1222891:-1:exon

COASY
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: COASY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1227834..1237831)
location: region:1227834-1237831:-1
so has part: feature:1227834-1237831:-1:exon
subclass of: SO_0000010

115639032
type: Gene
SIO_000068: ncbigene

position:1227834:-1
position: 1227834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237831:-1
position: 1237831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227834-1237831:-1:exon

COASY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: COASY
product: Coenzyme A synthase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030541311.1
SIO_010081: COASY
subclass of: SO_0000673
so part of: COASY
location: complement(join(1227834..1228509,1229176..1229322,1229412..1229509,1230174..1230258,1230571..1230635,1232262..1232451,1233167..1233298,1234514..1234728,1235753..1236421,1237769..1237831))
location: region:1227834-1237831:-1
so has part: feature:1237769-1237831:-1:exon
so has part: feature:1235753-1236421:-1:exon
so has part: feature:1234514-1234728:-1:exon
so has part: feature:1233167-1233298:-1:exon
so has part: feature:1232262-1232451:-1:exon
so has part: feature:1230571-1230635:-1:exon
so has part: feature:1230174-1230258:-1:exon
so has part: feature:1229412-1229509:-1:exon
so has part: feature:1229176-1229322:-1:exon
so has part: feature:1227834-1228509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1237769-1237831:-1:exon

position:1237769:-1
position: 1237769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1235753-1236421:-1:exon

position:1235753:-1
position: 1235753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236421:-1
position: 1236421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1234514-1234728:-1:exon

position:1234514:-1
position: 1234514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234728:-1
position: 1234728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1233167-1233298:-1:exon

position:1233167:-1
position: 1233167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233298:-1
position: 1233298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1232262-1232451:-1:exon

position:1232262:-1
position: 1232262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232451:-1
position: 1232451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1230571-1230635:-1:exon

position:1230571:-1
position: 1230571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230635:-1
position: 1230635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1230174-1230258:-1:exon

position:1230174:-1
position: 1230174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230258:-1
position: 1230258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1229412-1229509:-1:exon

position:1229412:-1
position: 1229412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229509:-1
position: 1229509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1229176-1229322:-1:exon

position:1229176:-1
position: 1229176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229322:-1
position: 1229322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1227834-1228509:-1:exon

position:1228509:-1
position: 1228509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COASY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: COASY
product: Coenzyme A synthase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030541310.1
SIO_010081: COASY
subclass of: SO_0000673
so part of: COASY
location: complement(join(1227834..1228509,1229176..1229322,1229412..1229509,1230174..1230258,1230571..1230635,1232262..1232451,1233167..1233298,1234514..1234728,1235753..1236421,1237761..1237812))
location: region:1227834-1237812:-1
so has part: feature:1237761-1237812:-1:exon
so has part: feature:1235753-1236421:-1:exon
so has part: feature:1234514-1234728:-1:exon
so has part: feature:1233167-1233298:-1:exon
so has part: feature:1232262-1232451:-1:exon
so has part: feature:1230571-1230635:-1:exon
so has part: feature:1230174-1230258:-1:exon
so has part: feature:1229412-1229509:-1:exon
so has part: feature:1229176-1229322:-1:exon
so has part: feature:1227834-1228509:-1:exon

position:1237812:-1
position: 1237812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237761-1237812:-1:exon

position:1237761:-1
position: 1237761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1235753-1236421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1234514-1234728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233167-1233298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232262-1232451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230571-1230635:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230174-1230258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1229412-1229509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229176-1229322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1227834-1228509:-1:exon

COASY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: COASY
product: Coenzyme A synthase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_030541309.1
SIO_010081: COASY
subclass of: SO_0000673
so part of: COASY
location: complement(join(1227834..1228509,1229176..1229322,1229412..1229509,1230174..1230258,1230571..1230635,1232262..1232451,1233167..1233298,1234514..1234728,1235753..1236421,1237635..1237732))
location: region:1227834-1237732:-1
so has part: feature:1237635-1237732:-1:exon
so has part: feature:1235753-1236421:-1:exon
so has part: feature:1234514-1234728:-1:exon
so has part: feature:1233167-1233298:-1:exon
so has part: feature:1232262-1232451:-1:exon
so has part: feature:1230571-1230635:-1:exon
so has part: feature:1230174-1230258:-1:exon
so has part: feature:1229412-1229509:-1:exon
so has part: feature:1229176-1229322:-1:exon
so has part: feature:1227834-1228509:-1:exon

position:1237732:-1
position: 1237732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237635-1237732:-1:exon

position:1237635:-1
position: 1237635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1235753-1236421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1234514-1234728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233167-1233298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232262-1232451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230571-1230635:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230174-1230258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1229412-1229509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229176-1229322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1227834-1228509:-1:exon

COASY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: COASY
product: Coenzyme A synthase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_030541308.1
SIO_010081: COASY
subclass of: SO_0000673
so part of: COASY
location: complement(join(1227834..1228509,1229176..1229322,1229412..1229509,1230174..1230258,1230571..1230635,1232262..1232451,1233167..1233298,1234514..1234728,1235753..1236548))
location: region:1227834-1236548:-1
so has part: feature:1235753-1236548:-1:exon
so has part: feature:1234514-1234728:-1:exon
so has part: feature:1233167-1233298:-1:exon
so has part: feature:1232262-1232451:-1:exon
so has part: feature:1230571-1230635:-1:exon
so has part: feature:1230174-1230258:-1:exon
so has part: feature:1229412-1229509:-1:exon
so has part: feature:1229176-1229322:-1:exon
so has part: feature:1227834-1228509:-1:exon

position:1236548:-1
position: 1236548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235753-1236548:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234514-1234728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233167-1233298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232262-1232451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230571-1230635:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230174-1230258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229412-1229509:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1229176-1229322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1227834-1228509:-1:exon

COASY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: COASY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional coenzyme A synthase isoform X1
translation: MRLGVSEAQRPLELTLCCPPCNLLPCSCVSVPGTMSVFRSGLLVLTAPLSALSLRLVPILASASRIVENTLYIHLQPGLSLTGSSQPRSTYVPATPEVYSLINKLYVDADAHSHLDVRVLLTNIRNQNLTPQSLSSVQNLSHPPEVILTDFQTSDGGQYNPVKQRLERYATSCYSCRPNLISVLLYPDYEPMMDQSELPPWKPDLDGGALRSYSDVVVGGTFDRLHNAHKILLSACCLLAENRLLVGVSDKDLLENKILKELIQPYEQRVEKLCEFLVDVKPSLRYDIVPLVDPYGPSITDPDLECIVVSEETRQGGVAVNKKRLENGLSELALHEILLVKDPGHGENEEEKISSSTIRQRLLGTLLQPPQKDPALPSRPYVIGLTGGTGSGKSSIARYLERLGAFLIDVDKLGHEAYAPGGPAYEQVAEEFGEDIMNEDGTINRKILGAKVFGNQERLKCLTDIMWPVIAKMTKRQLNEAAAQGKAVCVLDVAVLLEAGWTDMVHEVWMASVPEKEALRRIMARDGLSEEAARNRLQSQLSNSQRVKRSHVVLCTLWKPEATQKQVEKAWALLQQRIGQD
SIO_010081: COASY
subclass of: SO_0000673
so part of: COASY
location: complement(join(1228462..1228509,1229176..1229322,1229412..1229509,1230174..1230258,1230571..1230635,1232262..1232451,1233167..1233298,1234514..1234728,1235753..1236518))
location: region:1228462-1236518:-1
so has part: feature:1235753-1236518:-1:exon
so has part: feature:1234514-1234728:-1:exon
so has part: feature:1233167-1233298:-1:exon
so has part: feature:1232262-1232451:-1:exon
so has part: feature:1230571-1230635:-1:exon
so has part: feature:1230174-1230258:-1:exon
so has part: feature:1229412-1229509:-1:exon
so has part: feature:1229176-1229322:-1:exon
so has part: feature:1228462-1228509:-1:exon

XP_030397168.1
type: Protein
SIO_000068: ncbiprotein

position:1228462:-1
position: 1228462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236518:-1
position: 1236518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235753-1236518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234514-1234728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233167-1233298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232262-1232451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230571-1230635:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230174-1230258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229412-1229509:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1229176-1229322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1228462-1228509:-1:exon

COASY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: COASY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional coenzyme A synthase isoform X2
translation: MSVFRSGLLVLTAPLSALSLRLVPILASASRIVENTLYIHLQPGLSLTGSSQPRSTYVPATPEVYSLINKLYVDADAHSHLDVRVLLTNIRNQNLTPQSLSSVQNLSHPPEVILTDFQTSDGGQYNPVKQRLERYATSCYSCRPNLISVLLYPDYEPMMDQSELPPWKPDLDGGALRSYSDVVVGGTFDRLHNAHKILLSACCLLAENRLLVGVSDKDLLENKILKELIQPYEQRVEKLCEFLVDVKPSLRYDIVPLVDPYGPSITDPDLECIVVSEETRQGGVAVNKKRLENGLSELALHEILLVKDPGHGENEEEKISSSTIRQRLLGTLLQPPQKDPALPSRPYVIGLTGGTGSGKSSIARYLERLGAFLIDVDKLGHEAYAPGGPAYEQVAEEFGEDIMNEDGTINRKILGAKVFGNQERLKCLTDIMWPVIAKMTKRQLNEAAAQGKAVCVLDVAVLLEAGWTDMVHEVWMASVPEKEALRRIMARDGLSEEAARNRLQSQLSNSQRVKRSHVVLCTLWKPEATQKQVEKAWALLQQRIGQD
SIO_010081: COASY
subclass of: SO_0000673
so part of: COASY
location: complement(join(1228462..1228509,1229176..1229322,1229412..1229509,1230174..1230258,1230571..1230635,1232262..1232451,1233167..1233298,1234514..1234728,1235753..1236416))
location: region:1228462-1236416:-1
so has part: feature:1235753-1236416:-1:exon
so has part: feature:1234514-1234728:-1:exon
so has part: feature:1233167-1233298:-1:exon
so has part: feature:1232262-1232451:-1:exon
so has part: feature:1230571-1230635:-1:exon
so has part: feature:1230174-1230258:-1:exon
so has part: feature:1229412-1229509:-1:exon
so has part: feature:1229176-1229322:-1:exon
so has part: feature:1228462-1228509:-1:exon

XP_030397169.1
type: Protein
SIO_000068: ncbiprotein

position:1236416:-1
position: 1236416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235753-1236416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234514-1234728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233167-1233298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232262-1232451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230571-1230635:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230174-1230258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229412-1229509:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1229176-1229322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1228462-1228509:-1:exon

COASY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: COASY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional coenzyme A synthase isoform X2
translation: MSVFRSGLLVLTAPLSALSLRLVPILASASRIVENTLYIHLQPGLSLTGSSQPRSTYVPATPEVYSLINKLYVDADAHSHLDVRVLLTNIRNQNLTPQSLSSVQNLSHPPEVILTDFQTSDGGQYNPVKQRLERYATSCYSCRPNLISVLLYPDYEPMMDQSELPPWKPDLDGGALRSYSDVVVGGTFDRLHNAHKILLSACCLLAENRLLVGVSDKDLLENKILKELIQPYEQRVEKLCEFLVDVKPSLRYDIVPLVDPYGPSITDPDLECIVVSEETRQGGVAVNKKRLENGLSELALHEILLVKDPGHGENEEEKISSSTIRQRLLGTLLQPPQKDPALPSRPYVIGLTGGTGSGKSSIARYLERLGAFLIDVDKLGHEAYAPGGPAYEQVAEEFGEDIMNEDGTINRKILGAKVFGNQERLKCLTDIMWPVIAKMTKRQLNEAAAQGKAVCVLDVAVLLEAGWTDMVHEVWMASVPEKEALRRIMARDGLSEEAARNRLQSQLSNSQRVKRSHVVLCTLWKPEATQKQVEKAWALLQQRIGQD
SIO_010081: COASY
subclass of: SO_0000673
so part of: COASY
location: complement(join(1228462..1228509,1229176..1229322,1229412..1229509,1230174..1230258,1230571..1230635,1232262..1232451,1233167..1233298,1234514..1234728,1235753..1236416))
location: region:1228462-1236416:-1
so has part: feature:1235753-1236416:-1:exon
so has part: feature:1234514-1234728:-1:exon
so has part: feature:1233167-1233298:-1:exon
so has part: feature:1232262-1232451:-1:exon
so has part: feature:1230571-1230635:-1:exon
so has part: feature:1230174-1230258:-1:exon
so has part: feature:1229412-1229509:-1:exon
so has part: feature:1229176-1229322:-1:exon
so has part: feature:1228462-1228509:-1:exon

XP_030397170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1235753-1236416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234514-1234728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233167-1233298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232262-1232451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230571-1230635:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230174-1230258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229412-1229509:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1229176-1229322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1228462-1228509:-1:exon

COASY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: COASY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional coenzyme A synthase isoform X2
translation: MSVFRSGLLVLTAPLSALSLRLVPILASASRIVENTLYIHLQPGLSLTGSSQPRSTYVPATPEVYSLINKLYVDADAHSHLDVRVLLTNIRNQNLTPQSLSSVQNLSHPPEVILTDFQTSDGGQYNPVKQRLERYATSCYSCRPNLISVLLYPDYEPMMDQSELPPWKPDLDGGALRSYSDVVVGGTFDRLHNAHKILLSACCLLAENRLLVGVSDKDLLENKILKELIQPYEQRVEKLCEFLVDVKPSLRYDIVPLVDPYGPSITDPDLECIVVSEETRQGGVAVNKKRLENGLSELALHEILLVKDPGHGENEEEKISSSTIRQRLLGTLLQPPQKDPALPSRPYVIGLTGGTGSGKSSIARYLERLGAFLIDVDKLGHEAYAPGGPAYEQVAEEFGEDIMNEDGTINRKILGAKVFGNQERLKCLTDIMWPVIAKMTKRQLNEAAAQGKAVCVLDVAVLLEAGWTDMVHEVWMASVPEKEALRRIMARDGLSEEAARNRLQSQLSNSQRVKRSHVVLCTLWKPEATQKQVEKAWALLQQRIGQD
SIO_010081: COASY
subclass of: SO_0000673
so part of: COASY
location: complement(join(1228462..1228509,1229176..1229322,1229412..1229509,1230174..1230258,1230571..1230635,1232262..1232451,1233167..1233298,1234514..1234728,1235753..1236416))
location: region:1228462-1236416:-1
so has part: feature:1235753-1236416:-1:exon
so has part: feature:1234514-1234728:-1:exon
so has part: feature:1233167-1233298:-1:exon
so has part: feature:1232262-1232451:-1:exon
so has part: feature:1230571-1230635:-1:exon
so has part: feature:1230174-1230258:-1:exon
so has part: feature:1229412-1229509:-1:exon
so has part: feature:1229176-1229322:-1:exon
so has part: feature:1228462-1228509:-1:exon

XP_030397171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1235753-1236416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234514-1234728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233167-1233298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232262-1232451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230571-1230635:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230174-1230258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229412-1229509:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1229176-1229322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1228462-1228509:-1:exon

HSD17B1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: HSD17B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1248565..1254287)
location: region:1248565-1254287:-1
so has part: feature:1248565-1254287:-1:exon
subclass of: SO_0000010

115639087
type: Gene
SIO_000068: ncbigene

position:1248565:-1
position: 1248565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254287:-1
position: 1254287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248565-1254287:-1:exon

HSD17B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: HSD17B1
product: hydroxysteroid 17-beta dehydrogenase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030541429.1
SIO_010081: HSD17B1
subclass of: SO_0000673
so part of: HSD17B1
location: complement(join(1248565..1248848,1249303..1249486,1250555..1250648,1251121..1251203,1251921..1252082,1253167..1254287))
location: region:1248565-1254287:-1
so has part: feature:1253167-1254287:-1:exon
so has part: feature:1251921-1252082:-1:exon
so has part: feature:1251121-1251203:-1:exon
so has part: feature:1250555-1250648:-1:exon
so has part: feature:1249303-1249486:-1:exon
so has part: feature:1248565-1248848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1253167-1254287:-1:exon

position:1253167:-1
position: 1253167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1251921-1252082:-1:exon

position:1251921:-1
position: 1251921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252082:-1
position: 1252082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1251121-1251203:-1:exon

position:1251121:-1
position: 1251121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251203:-1
position: 1251203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1250555-1250648:-1:exon

position:1250555:-1
position: 1250555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250648:-1
position: 1250648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1249303-1249486:-1:exon

position:1249303:-1
position: 1249303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249486:-1
position: 1249486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1248565-1248848:-1:exon

position:1248848:-1
position: 1248848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSD17B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: HSD17B1
product: hydroxysteroid 17-beta dehydrogenase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030541428.1
SIO_010081: HSD17B1
subclass of: SO_0000673
so part of: HSD17B1
location: complement(join(1248565..1248848,1249303..1249486,1250555..1250648,1251121..1251300,1251921..1252082,1253167..1254287))
location: region:1248565-1254287:-1
so has part: feature:1253167-1254287:-1:exon
so has part: feature:1251921-1252082:-1:exon
so has part: feature:1251121-1251300:-1:exon
so has part: feature:1250555-1250648:-1:exon
so has part: feature:1249303-1249486:-1:exon
so has part: feature:1248565-1248848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1253167-1254287:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251921-1252082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1251121-1251300:-1:exon

position:1251300:-1
position: 1251300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1250555-1250648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249303-1249486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1248565-1248848:-1:exon

HSD17B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: HSD17B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: estradiol 17-beta-dehydrogenase 1 isoform X2
translation: MLCLRARASDGEDCGAHYRLLLGDRPGAGCAPGLGCLPQVQSLRHHAQPGQEGAAAGVRAGLPRQHPGDPAAGCHRPALARCSCAAGAGAARRRAGTIQAFLPGMKRRKAGKIIISSSVGALQGIPFNAVYCASKFAVEGLCESLAVILQQFNMHITLIECGPVNTSFLANLQHSDTEGSALQGLDPQTRTLYSQYLQHCQSLFRDVAQDTEEVLQVFLEAICAPCPPLRSFTTQVFMPLTRLKLTSPDGSEYIRAMHKFVFSAGEAQGDRT
SIO_010081: HSD17B1
subclass of: SO_0000673
so part of: HSD17B1
location: complement(join(1248678..1248848,1249303..1249486,1250555..1250648,1251121..1251203,1251921..1252082,1253167..1253291))
location: region:1248678-1253291:-1
so has part: feature:1253167-1253291:-1:exon
so has part: feature:1251921-1252082:-1:exon
so has part: feature:1251121-1251203:-1:exon
so has part: feature:1250555-1250648:-1:exon
so has part: feature:1249303-1249486:-1:exon
so has part: feature:1248678-1248848:-1:exon

XP_030397289.1
type: Protein
SIO_000068: ncbiprotein

position:1248678:-1
position: 1248678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253291:-1
position: 1253291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253167-1253291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251921-1252082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1251121-1251203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1250555-1250648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249303-1249486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1248678-1248848:-1:exon

HSD17B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: HSD17B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: estradiol 17-beta-dehydrogenase 1 isoform X1
translation: MEKTVVLITGCSSGIGLGLAVRLASDASRRFKVYATMRNLAKKERLLECVRGCHASTLEILQLDVTDPLSLAAAVQQVQEQRVDVLVCNAGVGLMGPLETCSYQAMKNIFDVNVFGTISTIQAFLPGMKRRKAGKIIISSSVGALQGIPFNAVYCASKFAVEGLCESLAVILQQFNMHITLIECGPVNTSFLANLQHSDTEGSALQGLDPQTRTLYSQYLQHCQSLFRDVAQDTEEVLQVFLEAICAPCPPLRSFTTQVFMPLTRLKLTSPDGSEYIRAMHKFVFSAGEAQGDRT
SIO_010081: HSD17B1
subclass of: SO_0000673
so part of: HSD17B1
location: complement(join(1248678..1248848,1249303..1249486,1250555..1250648,1251121..1251300,1251921..1252082,1253167..1253263))
location: region:1248678-1253263:-1
so has part: feature:1253167-1253263:-1:exon
so has part: feature:1251921-1252082:-1:exon
so has part: feature:1251121-1251300:-1:exon
so has part: feature:1250555-1250648:-1:exon
so has part: feature:1249303-1249486:-1:exon
so has part: feature:1248678-1248848:-1:exon

XP_030397288.1
type: Protein
SIO_000068: ncbiprotein

position:1253263:-1
position: 1253263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253167-1253263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251921-1252082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1251121-1251300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1250555-1250648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249303-1249486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1248678-1248848:-1:exon

NAGLU
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: NAGLU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1254370..1263016)
location: region:1254370-1263016:-1
so has part: feature:1254370-1263016:-1:exon
subclass of: SO_0000010

115639219
type: Gene
SIO_000068: ncbigene

position:1254370:-1
position: 1254370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263016:-1
position: 1263016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1254370-1263016:-1:exon

NAGLU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: NAGLU
product: N-acetyl-alpha-glucosaminidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030541704.1
SIO_010081: NAGLU
subclass of: SO_0000673
so part of: NAGLU
location: complement(join(1254370..1257070,1257634..1257890,1258479..1258564,1258941..1259087,1259546..1259693,1262440..1262759,1263011..1263016))
location: region:1254370-1263016:-1
so has part: feature:1263011-1263016:-1:exon
so has part: feature:1262440-1262759:-1:exon
so has part: feature:1259546-1259693:-1:exon
so has part: feature:1258941-1259087:-1:exon
so has part: feature:1258479-1258564:-1:exon
so has part: feature:1257634-1257890:-1:exon
so has part: feature:1254370-1257070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1263011-1263016:-1:exon

position:1263011:-1
position: 1263011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1262440-1262759:-1:exon

position:1262440:-1
position: 1262440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262759:-1
position: 1262759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1259546-1259693:-1:exon

position:1259546:-1
position: 1259546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259693:-1
position: 1259693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1258941-1259087:-1:exon

position:1258941:-1
position: 1258941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259087:-1
position: 1259087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1258479-1258564:-1:exon

position:1258479:-1
position: 1258479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258564:-1
position: 1258564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1257634-1257890:-1:exon

position:1257634:-1
position: 1257634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257890:-1
position: 1257890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1254370-1257070:-1:exon

position:1257070:-1
position: 1257070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAGLU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: NAGLU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylglucosaminidase
translation: MRAADARQEAAVRELLRRLLGPRAAAGFAVSVNRSLAAGGLDTYRLSSPRGAAERVRVAGSSGVAAATGLYRYLRELCGCHVSWSGAQLRLPDPLPAVPGVISATSPNRFRYYQNVCTQSYSYVWWDWPRWEREIDWMALNGINLALAFTGQEAVWQRVYLSLGLNQSEIDEYVTGPAFLAWNRMGNLHAWAGPLPLSWNLKQLYLQYRILERMRSLGMIPVLPAFAGHVPRGVLRAFPRINVTRLGSWSNFDCTYSCAYLLDPGDPMFQVIGTLFLKELIREFGTDHIYNADTFNEMCPLSSDPAYLSGVSAAVFKSMTAADPDALWLMQGWLFQHQPDFWQPAQVRALLRGVPTGRMIVLDLFAESKPVYQRTESFYGQPFIWCMLHNFGGNHGLFGMMESINRGPFDARRFPSSTLVGTGLAPEGIEQNDVVYELMSELGWHQEPLDLQQWVANYAERRYGTRNAEAAGAWQLLLRSVYHCSGPCVNHNHSPLVRRPSLRMATELWYNKSDVYEAWRLLLGAAAELGASPTFRYDLVDVTRQAVQQLVSEYYLEIKQAFESRSLPELLTAGGVLLYDLLPELDGLLASDPHFLLGRWLEQARATATSDREAELYDLNARNQVTLWGPNGNILDYANKQLGGLVLDYYRVRWSLFVSALVESLNTGTPFHQEQFNQAVFQLERGFVYNGKRYPSQPAGNTLEIARKIFLKYYPHAMRRGRAGAA
SIO_010081: NAGLU
subclass of: SO_0000673
so part of: NAGLU
location: complement(join(1255854..1257070,1257634..1257890,1258479..1258564,1258941..1259087,1259546..1259693,1262440..1262759,1263011..1263016))
location: region:1255854-1263016:-1
so has part: feature:1263011-1263016:-1:exon
so has part: feature:1262440-1262759:-1:exon
so has part: feature:1259546-1259693:-1:exon
so has part: feature:1258941-1259087:-1:exon
so has part: feature:1258479-1258564:-1:exon
so has part: feature:1257634-1257890:-1:exon
so has part: feature:1255854-1257070:-1:exon

XP_030397564.1
type: Protein
SIO_000068: ncbiprotein

position:1255854:-1
position: 1255854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263011-1263016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1262440-1262759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1259546-1259693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1258941-1259087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1258479-1258564:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1257634-1257890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1255854-1257070:-1:exon

LOC115639174
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115639174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1279014..1298879
location: region:1279014-1298879:1
so has part: feature:1279014-1298879:1:exon
subclass of: SO_0000010

115639174
type: Gene
SIO_000068: ncbigene

position:1279014:1
position: 1279014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298879:1
position: 1298879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279014-1298879:1:exon

LOC115639174
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115639174
product: serine/threonine-protein kinase 17A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030541625.1
SIO_010081: LOC115639174
subclass of: SO_0000673
so part of: LOC115639174
location: join(1279014..1279258,1287818..1288030,1291845..1291989,1292228..1292354,1292710..1292758,1294213..1294392,1294689..1298879)
location: region:1279014-1298879:1
so has part: feature:1279014-1279258:1:exon
so has part: feature:1287818-1288030:1:exon
so has part: feature:1291845-1291989:1:exon
so has part: feature:1292228-1292354:1:exon
so has part: feature:1292710-1292758:1:exon
so has part: feature:1294213-1294392:1:exon
so has part: feature:1294689-1298879:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1279014-1279258:1:exon

position:1279258:1
position: 1279258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287818-1288030:1:exon

position:1287818:1
position: 1287818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288030:1
position: 1288030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1291845-1291989:1:exon

position:1291845:1
position: 1291845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291989:1
position: 1291989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1292228-1292354:1:exon

position:1292228:1
position: 1292228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292354:1
position: 1292354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1292710-1292758:1:exon

position:1292710:1
position: 1292710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292758:1
position: 1292758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1294213-1294392:1:exon

position:1294213:1
position: 1294213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294392:1
position: 1294392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1294689-1298879:1:exon

position:1294689:1
position: 1294689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115639174
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115639174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 17A-like
translation: MSRQGMAAHTQTRIRTDRFADSYTLLGRELGRGKFAVVKKCLEKATGREFAAKFLRKRRKGEDCRLDIINEIAVLELAARSPHVVDLHEVYETPAEIVLVLECAAGGEIFQQCVAEQDEAFTEQDVIRLVRQILRGVAFLHQHNVVHLDLKPQNILLTSSSPLGDIRIVDFGLSRRVDAVREVREILGTPEYVAPEVLSYEPISTATDMWSIGVLTYVMLTGESPFLGDTKQETFLNISQVNVQFPPDVFQGISDQAIDFIRSLLVKNPRKRAKAEQCLQHPWLDPAPAPAVELAAPAQADLEQAPVSEGSSGPEEDEELVLVASYMMPCPCRQLRGLEVRETELAGVRKPFPALQEIAQELVF
SIO_010081: LOC115639174
subclass of: SO_0000673
so part of: LOC115639174
location: join(1279164..1279258,1287818..1288030,1291845..1291989,1292228..1292354,1292710..1292758,1294213..1294392,1294689..1294974)
location: region:1279164-1294974:1
so has part: feature:1279164-1279258:1:exon
so has part: feature:1287818-1288030:1:exon
so has part: feature:1291845-1291989:1:exon
so has part: feature:1292228-1292354:1:exon
so has part: feature:1292710-1292758:1:exon
so has part: feature:1294213-1294392:1:exon
so has part: feature:1294689-1294974:1:exon

XP_030397485.1
type: Protein
SIO_000068: ncbiprotein

position:1279164:1
position: 1279164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294974:1
position: 1294974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279164-1279258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287818-1288030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291845-1291989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1292228-1292354:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1292710-1292758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294213-1294392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294689-1294974:1:exon

ATP6V0A1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: ATP6V0A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1302416..1349478)
location: region:1302416-1349478:-1
so has part: feature:1302416-1349478:-1:exon
subclass of: SO_0000010

115638885
type: Gene
SIO_000068: ncbigene

position:1302416:-1
position: 1302416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349478:-1
position: 1349478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302416-1349478:-1:exon

ATP6V0A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: ATP6V0A1
product: ATPase H+ transporting V0 subunit a1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030540926.1
SIO_010081: ATP6V0A1
subclass of: SO_0000673
so part of: ATP6V0A1
location: complement(join(1302416..1305295,1315151..1315322,1317328..1317445,1321354..1321461,1325216..1325323,1326151..1326367,1326817..1326935,1327837..1327927,1328548..1328705,1329527..1329666,1331307..1331457,1333171..1333383,1334868..1334961,1335757..1335839,1337648..1337774,1338713..1338795,1344848..1344976,1346575..1346672,1347038..1347116,1347442..1347602,1349410..1349478))
location: region:1302416-1349478:-1
so has part: feature:1349410-1349478:-1:exon
so has part: feature:1347442-1347602:-1:exon
so has part: feature:1347038-1347116:-1:exon
so has part: feature:1346575-1346672:-1:exon
so has part: feature:1344848-1344976:-1:exon
so has part: feature:1338713-1338795:-1:exon
so has part: feature:1337648-1337774:-1:exon
so has part: feature:1335757-1335839:-1:exon
so has part: feature:1334868-1334961:-1:exon
so has part: feature:1333171-1333383:-1:exon
so has part: feature:1331307-1331457:-1:exon
so has part: feature:1329527-1329666:-1:exon
so has part: feature:1328548-1328705:-1:exon
so has part: feature:1327837-1327927:-1:exon
so has part: feature:1326817-1326935:-1:exon
so has part: feature:1326151-1326367:-1:exon
so has part: feature:1325216-1325323:-1:exon
so has part: feature:1321354-1321461:-1:exon
so has part: feature:1317328-1317445:-1:exon
so has part: feature:1315151-1315322:-1:exon
so has part: feature:1302416-1305295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1349410-1349478:-1:exon

position:1349410:-1
position: 1349410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1347442-1347602:-1:exon

position:1347442:-1
position: 1347442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347602:-1
position: 1347602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1347038-1347116:-1:exon

position:1347038:-1
position: 1347038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347116:-1
position: 1347116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1346575-1346672:-1:exon

position:1346575:-1
position: 1346575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346672:-1
position: 1346672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1344848-1344976:-1:exon

position:1344848:-1
position: 1344848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344976:-1
position: 1344976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1338713-1338795:-1:exon

position:1338713:-1
position: 1338713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338795:-1
position: 1338795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1337648-1337774:-1:exon

position:1337648:-1
position: 1337648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337774:-1
position: 1337774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1335757-1335839:-1:exon

position:1335757:-1
position: 1335757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335839:-1
position: 1335839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1334868-1334961:-1:exon

position:1334868:-1
position: 1334868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334961:-1
position: 1334961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1333171-1333383:-1:exon

position:1333171:-1
position: 1333171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333383:-1
position: 1333383
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urn:…
SIO_000300: 11
SIO_000628: feature:1331307-1331457:-1:exon

position:1331307:-1
position: 1331307
reference: sequence
type: ReverseStrandPosition
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position:1331457:-1
position: 1331457
reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:1329527-1329666:-1:exon

position:1329527:-1
position: 1329527
reference: sequence
type: ReverseStrandPosition
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position:1329666:-1
position: 1329666
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:1328548-1328705:-1:exon

position:1328548:-1
position: 1328548
reference: sequence
type: ReverseStrandPosition
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position:1328705:-1
position: 1328705
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:1327837-1327927:-1:exon