Gopherus evgoodei ecotype Sinaloan lineage chromosome 22, rGopEvg1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Gopherus evgoodei ecotype Sinaloan lineage chromosome 22, rGopEvg1_v1.p, whole genome shotgun sequence.
sequence version: NC_044343.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044343.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA559383
dblink: SAMN03496275
keyword: WGS
keyword: RefSeq
source: Gopherus evgoodei (Goodes thornscrub tortoise)
organism: Gopherus evgoodei
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Gopherus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM017317.1.\nAssembly name: rGopEvg1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/07/25. The original whole-genome shotgun project has the\naccession VHHN00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 31-JAN-2019\nAssembly Method :: FALCON v. 5.1.1; FALCON-Unzip v. 1.0.2;\n purge_haplotigs v. bitbucket 7.10.2018;\n scaff10x v. 2.1; Bionano Solve DLS v.\n 3.2.1; Salsa2 v. 2.2; Arrow v.\n 5.1.0.26412; longranger align v. 2.2.2;\n freebayes v. 1.2.0; gEVAL manual curation\n v. 2019-01-31; VGP standard assembly\n pipeline v. 1.5\nAssembly Name :: rGopEvg1_v1.p\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 58.0x\nSequencing Technology :: PacBio Sequel I; 10X Genomics linked\n reads; Arima Genomics Hi-C; Bionano\n Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Gopherus evgoodei Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 17272090
topology: linear
so has quality: SO_0000987
location: 1..17272090
location: region:1-17272090:1
RO_0002162: 1825980

NC_044343
type: RefSeq
SIO_000068: refseq

PRJNA559383
type: BioProject
SIO_000068: bioproject

SAMN03496275
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17272090:1
position: 17272090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17272090:1:source
so part of: sequence
organism: Gopherus evgoodei
mol type: genomic DNA
chromosome: 22
sex: male
tissue type: whole blood
ecotype: Sinaloan lineage
country: Mexico: Sonora
collection date: 2010-08-10
collected by: T. Edwards

1825980
type: Taxonomy
SIO_000068: taxonomy

LOC115638495
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638495
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7..64844)
location: region:7-64844:-1
so has part: feature:7-64844:-1:exon
subclass of: SO_0000011

115638495
type: Gene
SIO_000068: ncbigene

position:7:-1
position: 7
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64844:-1
position: 64844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7-64844:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003997461.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,890..2840,3140..3282,3652..3943,4309..5183,5481..5622,10140..10987,11814..12663,12964..13094,60646..60693,61691..61842,64595..64844))
location: region:7-64844:-1
so has part: feature:64595-64844:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3652-3943:-1:exon
so has part: feature:3140-3282:-1:exon
so has part: feature:890-2840:-1:exon
so has part: feature:7-413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64844:-1:exon

position:64595:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61691-61842:-1:exon

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urn:…
SIO_000300: 3
SIO_000628: feature:60646-60693:-1:exon

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urn:…
SIO_000300: 4
SIO_000628: feature:12964-13094:-1:exon

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position:13094:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:11814-12663:-1:exon

position:11814:-1
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reference: sequence
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position:12663:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:10140-10987:-1:exon

position:10140:-1
position: 10140
reference: sequence
type: ReverseStrandPosition
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position:10987:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:5481-5622:-1:exon

position:5481:-1
position: 5481
reference: sequence
type: ReverseStrandPosition
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position:5622:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:4309-5183:-1:exon

position:4309:-1
position: 4309
reference: sequence
type: ReverseStrandPosition
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position:5183:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:3652-3943:-1:exon

position:3652:-1
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reference: sequence
type: ReverseStrandPosition
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position:3943:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:3140-3282:-1:exon

position:3140:-1
position: 3140
reference: sequence
type: ReverseStrandPosition
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position:3282:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:890-2840:-1:exon

position:890:-1
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reference: sequence
type: ReverseStrandPosition
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position:2840:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:7-413:-1:exon

position:413:-1
position: 413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003997460.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,890..1720,2471..2840,3140..3943,4309..5183,5481..5622,10140..10987,11814..12663,12964..13094,60646..60693,61691..61842,64595..64843))
location: region:7-64843:-1
so has part: feature:64595-64843:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:2471-2840:-1:exon
so has part: feature:890-1720:-1:exon
so has part: feature:7-413:-1:exon

position:64843:-1
position: 64843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64843:-1:exon

urn:…
SIO_000300: 2
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SIO_000628: feature:60646-60693:-1:exon

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SIO_000300: 4
SIO_000628: feature:12964-13094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11814-12663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10140-10987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5481-5622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4309-5183:-1:exon

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SIO_000300: 9
SIO_000628: feature:3140-3943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2471-2840:-1:exon

position:2471:-1
position: 2471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:890-1720:-1:exon

position:1720:-1
position: 1720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7-413:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997462.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,890..2840,3140..3943,4309..4444,4821..5183,5481..5622,10140..10987,11814..12663,12964..13094,60646..60693,61691..61842,64595..64842))
location: region:7-64842:-1
so has part: feature:64595-64842:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4821-5183:-1:exon
so has part: feature:4309-4444:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:890-2840:-1:exon
so has part: feature:7-413:-1:exon

position:64842:-1
position: 64842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61691-61842:-1:exon

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SIO_000300: 3
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SIO_000300: 5
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SIO_000628: feature:10140-10987:-1:exon

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SIO_000300: 7
SIO_000628: feature:5481-5622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4821-5183:-1:exon

position:4821:-1
position: 4821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4309-4444:-1:exon

position:4444:-1
position: 4444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3140-3943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890-2840:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7-413:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997458.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..204,380..413,894..2840,3140..3943,4309..5183,5481..5622,10140..10987,11814..12663,12964..13094,60646..60693,61691..61842,64595..64841))
location: region:7-64841:-1
so has part: feature:64595-64841:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:894-2840:-1:exon
so has part: feature:380-413:-1:exon
so has part: feature:7-204:-1:exon

position:64841:-1
position: 64841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64841:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61691-61842:-1:exon

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SIO_000300: 3
SIO_000628: feature:60646-60693:-1:exon

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SIO_000300: 4
SIO_000628: feature:12964-13094:-1:exon

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SIO_000300: 5
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SIO_000628: feature:10140-10987:-1:exon

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SIO_000628: feature:3140-3943:-1:exon

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SIO_000300: 10
SIO_000628: feature:894-2840:-1:exon

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type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:380-413:-1:exon

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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:7-204:-1:exon

position:204:-1
position: 204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997457.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..204,380..413,890..2840,3140..3943,4309..5183,5481..5622,10140..10987,11814..12663,12964..13094,60646..60693,61691..61842,64595..64841))
location: region:7-64841:-1
so has part: feature:64595-64841:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:64595-64841:-1:exon

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SIO_000300: 2
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SIO_000300: 6
SIO_000628: feature:10140-10987:-1:exon

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SIO_000300: 7
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SIO_000300: 8
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SIO_000628: feature:890-2840:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:380-413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7-204:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003997454.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,890..2840,3140..3943,4309..5183,5481..5622,10140..10987,11814..12663,12964..13094,60646..60693,61691..61838,64595..64840))
location: region:7-64840:-1
so has part: feature:64595-64840:-1:exon
so has part: feature:61691-61838:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:890-2840:-1:exon
so has part: feature:7-413:-1:exon

position:64840:-1
position: 64840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61691-61838:-1:exon

position:61838:-1
position: 61838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60646-60693:-1:exon

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SIO_000300: 4
SIO_000628: feature:12964-13094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11814-12663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10140-10987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5481-5622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4309-5183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3140-3943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890-2840:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7-413:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997453.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,890..2840,3140..3943,4309..5183,5481..5622,10140..10987,11814..12663,12968..13094,60646..60693,61691..61842,64595..64840))
location: region:7-64840:-1
so has part: feature:64595-64840:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12968-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:890-2840:-1:exon
so has part: feature:7-413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64840:-1:exon

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SIO_000300: 2
SIO_000628: feature:61691-61842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60646-60693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12968-13094:-1:exon

position:12968:-1
position: 12968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11814-12663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10140-10987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5481-5622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4309-5183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3140-3943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890-2840:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7-413:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997464.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,890..2840,3140..3943,4309..5183,5481..5622,11814..12663,12964..13094,60646..60693,61691..61842,64595..64840))
location: region:7-64840:-1
so has part: feature:64595-64840:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:890-2840:-1:exon
so has part: feature:7-413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61691-61842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60646-60693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12964-13094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11814-12663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5481-5622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4309-5183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3140-3943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890-2840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7-413:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997452.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,894..2840,3140..3943,4309..5183,5481..5622,10140..10987,11814..12663,12964..13094,60646..60693,61691..61842,64595..64840))
location: region:7-64840:-1
so has part: feature:64595-64840:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:894-2840:-1:exon
so has part: feature:7-413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61691-61842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60646-60693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12964-13094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11814-12663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10140-10987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5481-5622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4309-5183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3140-3943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:894-2840:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7-413:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997451.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,890..2840,3140..3943,4309..5183,5481..5622,10140..10987,11814..12663,12964..13094,60646..60693,61691..61842,64595..64840))
location: region:7-64840:-1
so has part: feature:64595-64840:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:890-2840:-1:exon
so has part: feature:7-413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61691-61842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60646-60693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12964-13094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11814-12663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10140-10987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5481-5622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4309-5183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3140-3943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890-2840:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7-413:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003997455.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,890..2840,3140..3943,4309..5183,5481..5622,10140..10987,11814..12663,12964..13094,60646..60693,64595..64838))
location: region:7-64838:-1
so has part: feature:64595-64838:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:890-2840:-1:exon
so has part: feature:7-413:-1:exon

position:64838:-1
position: 64838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60646-60693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12964-13094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11814-12663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10140-10987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5481-5622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4309-5183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3140-3943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890-2840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7-413:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003997456.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,890..2840,3140..3943,4309..5183,5481..5622,10140..10276,10632..10987,11814..12663,12964..13094,60646..60693,61691..61842,64595..64838))
location: region:7-64838:-1
so has part: feature:64595-64838:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10632-10987:-1:exon
so has part: feature:10140-10276:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:890-2840:-1:exon
so has part: feature:7-413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61691-61842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60646-60693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12964-13094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11814-12663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10632-10987:-1:exon

position:10632:-1
position: 10632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10140-10276:-1:exon

position:10276:-1
position: 10276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5481-5622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4309-5183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3140-3943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890-2840:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7-413:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003997463.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,890..1013,2471..2840,3140..3943,4309..5183,5481..5622,10140..10987,11814..12663,12964..13094,60646..60693,61691..61842,64595..64837))
location: region:7-64837:-1
so has part: feature:64595-64837:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:2471-2840:-1:exon
so has part: feature:890-1013:-1:exon
so has part: feature:7-413:-1:exon

position:64837:-1
position: 64837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61691-61842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60646-60693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12964-13094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11814-12663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10140-10987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5481-5622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4309-5183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3140-3943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2471-2840:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890-1013:-1:exon

position:1013:-1
position: 1013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7-413:-1:exon

LOC115638495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638495
product: uncharacterized LOC115638495, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997459.1
SIO_010081: LOC115638495
subclass of: SO_0000673
so part of: LOC115638495
location: complement(join(7..413,890..1013,1608..2840,3140..3943,4309..5183,5481..5622,10140..10987,11814..12663,12964..13094,60646..60693,61691..61842,64595..64835))
location: region:7-64835:-1
so has part: feature:64595-64835:-1:exon
so has part: feature:61691-61842:-1:exon
so has part: feature:60646-60693:-1:exon
so has part: feature:12964-13094:-1:exon
so has part: feature:11814-12663:-1:exon
so has part: feature:10140-10987:-1:exon
so has part: feature:5481-5622:-1:exon
so has part: feature:4309-5183:-1:exon
so has part: feature:3140-3943:-1:exon
so has part: feature:1608-2840:-1:exon
so has part: feature:890-1013:-1:exon
so has part: feature:7-413:-1:exon

position:64835:-1
position: 64835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64595-64835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61691-61842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60646-60693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12964-13094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11814-12663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10140-10987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5481-5622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4309-5183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3140-3943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1608-2840:-1:exon

position:1608:-1
position: 1608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:890-1013:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7-413:-1:exon

TPM4
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: TPM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 26571..61684
location: region:26571-61684:1
so has part: feature:26571-61684:1:exon
subclass of: SO_0000010

115638486
type: Gene
SIO_000068: ncbigene

position:26571:1
position: 26571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61684:1
position: 61684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26571-61684:1:exon

TPM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TPM4
product: tropomyosin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030540082.1
SIO_010081: TPM4
subclass of: SO_0000673
so part of: TPM4
location: join(26571..28062,37685..37810,42822..42955,46543..46660,47658..47728,48527..48602,50634..50696,50788..50857,60777..61684)
location: region:26571-61684:1
so has part: feature:26571-28062:1:exon
so has part: feature:37685-37810:1:exon
so has part: feature:42822-42955:1:exon
so has part: feature:46543-46660:1:exon
so has part: feature:47658-47728:1:exon
so has part: feature:48527-48602:1:exon
so has part: feature:50634-50696:1:exon
so has part: feature:50788-50857:1:exon
so has part: feature:60777-61684:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26571-28062:1:exon

position:28062:1
position: 28062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37685-37810:1:exon

position:37685:1
position: 37685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37810:1
position: 37810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42822-42955:1:exon

position:42822:1
position: 42822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42955:1
position: 42955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:46543-46660:1:exon

position:46543:1
position: 46543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46660:1
position: 46660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:47658-47728:1:exon

position:47658:1
position: 47658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47728:1
position: 47728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:48527-48602:1:exon

position:48527:1
position: 48527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48602:1
position: 48602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50634-50696:1:exon

position:50634:1
position: 50634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50696:1
position: 50696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:50788-50857:1:exon

position:50788:1
position: 50788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50857:1
position: 50857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:60777-61684:1:exon

position:60777:1
position: 60777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1825980
gene: TPM4
product: tropomyosin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003997450.1
SIO_010081: TPM4
so part of: TPM4
location: join(26571..28062,37685..37810,42822..42955,46543..46660,47658..47728,48527..48602,50634..50696,50788..50857,60777..61093,61386..61684)
location: region:26571-61684:1
so has part: feature:26571-28062:1:exon
so has part: feature:37685-37810:1:exon
so has part: feature:42822-42955:1:exon
so has part: feature:46543-46660:1:exon
so has part: feature:47658-47728:1:exon
so has part: feature:48527-48602:1:exon
so has part: feature:50634-50696:1:exon
so has part: feature:50788-50857:1:exon
so has part: feature:60777-61093:1:exon
so has part: feature:61386-61684:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26571-28062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37685-37810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42822-42955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46543-46660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47658-47728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48527-48602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50634-50696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50788-50857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60777-61093:1:exon

position:61093:1
position: 61093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:61386-61684:1:exon

position:61386:1
position: 61386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TPM4
product: tropomyosin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 121 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030540081.1
SIO_010081: TPM4
subclass of: SO_0000673
so part of: TPM4
location: join(26571..28062,37685..37810,42822..42955,46543..46660,47658..47728,48527..48602,50634..50696,50788..50857,54515..56987)
location: region:26571-56987:1
so has part: feature:26571-28062:1:exon
so has part: feature:37685-37810:1:exon
so has part: feature:42822-42955:1:exon
so has part: feature:46543-46660:1:exon
so has part: feature:47658-47728:1:exon
so has part: feature:48527-48602:1:exon
so has part: feature:50634-50696:1:exon
so has part: feature:50788-50857:1:exon
so has part: feature:54515-56987:1:exon

position:56987:1
position: 56987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26571-28062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37685-37810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42822-42955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46543-46660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47658-47728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48527-48602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50634-50696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50788-50857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54515-56987:1:exon

position:54515:1
position: 54515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TPM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-4 chain isoform X2
translation: MEAIKKKMQMLKLDKENAIDRAEQAEADKKAAEDKCKQVEDELVALQKKLKGTEDELDKYSEALKDAQEKLEQTDKKATDAEGEVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSELKCSDLEEELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEVPLALAPEAM
SIO_010081: TPM4
subclass of: SO_0000673
so part of: TPM4
location: join(27949..28062,37685..37810,42822..42955,46543..46660,47658..47728,48527..48602,50634..50696,50788..50857,60777..60808)
location: region:27949-60808:1
so has part: feature:27949-28062:1:exon
so has part: feature:37685-37810:1:exon
so has part: feature:42822-42955:1:exon
so has part: feature:46543-46660:1:exon
so has part: feature:47658-47728:1:exon
so has part: feature:48527-48602:1:exon
so has part: feature:50634-50696:1:exon
so has part: feature:50788-50857:1:exon
so has part: feature:60777-60808:1:exon

XP_030395942.1
type: Protein
SIO_000068: ncbiprotein

position:27949:1
position: 27949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60808:1
position: 60808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27949-28062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37685-37810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42822-42955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46543-46660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47658-47728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48527-48602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50634-50696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50788-50857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60777-60808:1:exon

TPM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TPM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-4 chain isoform X1
translation: MEAIKKKMQMLKLDKENAIDRAEQAEADKKAAEDKCKQVEDELVALQKKLKGTEDELDKYSEALKDAQEKLEQTDKKATDAEGEVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSELKCSDLEEELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSL
SIO_010081: TPM4
subclass of: SO_0000673
so part of: TPM4
location: join(27949..28062,37685..37810,42822..42955,46543..46660,47658..47728,48527..48602,50634..50696,50788..50857,54515..54597)
location: region:27949-54597:1
so has part: feature:27949-28062:1:exon
so has part: feature:37685-37810:1:exon
so has part: feature:42822-42955:1:exon
so has part: feature:46543-46660:1:exon
so has part: feature:47658-47728:1:exon
so has part: feature:48527-48602:1:exon
so has part: feature:50634-50696:1:exon
so has part: feature:50788-50857:1:exon
so has part: feature:54515-54597:1:exon

XP_030395941.1
type: Protein
SIO_000068: ncbiprotein

position:54597:1
position: 54597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27949-28062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37685-37810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42822-42955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46543-46660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47658-47728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48527-48602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50634-50696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50788-50857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54515-54597:1:exon

RAB8A
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: RAB8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 64940..86927
location: region:64940-86927:1
so has part: feature:64940-86927:1:exon
subclass of: SO_0000010

115638490
type: Gene
SIO_000068: ncbigene

position:64940:1
position: 64940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86927:1
position: 86927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64940-86927:1:exon

RAB8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RAB8A
product: RAB8A, member RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030540089.1
SIO_010081: RAB8A
subclass of: SO_0000673
so part of: RAB8A
location: join(64940..65109,66395..66468,69648..69708,76395..76472,78133..78222,80485..80550,81282..81332,82602..84545)
location: region:64940-84545:1
so has part: feature:64940-65109:1:exon
so has part: feature:66395-66468:1:exon
so has part: feature:69648-69708:1:exon
so has part: feature:76395-76472:1:exon
so has part: feature:78133-78222:1:exon
so has part: feature:80485-80550:1:exon
so has part: feature:81282-81332:1:exon
so has part: feature:82602-84545:1:exon

position:84545:1
position: 84545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64940-65109:1:exon

position:65109:1
position: 65109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66395-66468:1:exon

position:66395:1
position: 66395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66468:1
position: 66468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69648-69708:1:exon

position:69648:1
position: 69648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69708:1
position: 69708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:76395-76472:1:exon

position:76395:1
position: 76395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76472:1
position: 76472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:78133-78222:1:exon

position:78133:1
position: 78133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78222:1
position: 78222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:80485-80550:1:exon

position:80485:1
position: 80485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80550:1
position: 80550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:81282-81332:1:exon

position:81282:1
position: 81282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81332:1
position: 81332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:82602-84545:1:exon

position:82602:1
position: 82602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RAB8A
product: RAB8A, member RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_030540088.1
SIO_010081: RAB8A
subclass of: SO_0000673
so part of: RAB8A
location: join(64941..65109,66408..66468,69648..69708,76395..76472,78133..78222,80485..80550,81282..81332,82602..86927)
location: region:64941-86927:1
so has part: feature:64941-65109:1:exon
so has part: feature:66408-66468:1:exon
so has part: feature:69648-69708:1:exon
so has part: feature:76395-76472:1:exon
so has part: feature:78133-78222:1:exon
so has part: feature:80485-80550:1:exon
so has part: feature:81282-81332:1:exon
so has part: feature:82602-86927:1:exon

position:64941:1
position: 64941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64941-65109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66408-66468:1:exon

position:66408:1
position: 66408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69648-69708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76395-76472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78133-78222:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80485-80550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81282-81332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82602-86927:1:exon

RAB8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RAB8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-8A isoform X1
translation: MLPEGRGPARWNMAKTYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDVNDKRQVSREQGEKLAIGFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQDSNQGVKITPDQQKKSSFFRCALL
SIO_010081: RAB8A
subclass of: SO_0000673
so part of: RAB8A
location: join(64950..65109,66408..66468,69648..69708,76395..76472,78133..78222,80485..80550,81282..81332,82602..82694)
location: region:64950-82694:1
so has part: feature:64950-65109:1:exon
so has part: feature:66408-66468:1:exon
so has part: feature:69648-69708:1:exon
so has part: feature:76395-76472:1:exon
so has part: feature:78133-78222:1:exon
so has part: feature:80485-80550:1:exon
so has part: feature:81282-81332:1:exon
so has part: feature:82602-82694:1:exon

XP_030395948.1
type: Protein
SIO_000068: ncbiprotein

position:64950:1
position: 64950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82694:1
position: 82694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64950-65109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66408-66468:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69648-69708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76395-76472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78133-78222:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80485-80550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81282-81332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82602-82694:1:exon

RAB8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RAB8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-8A isoform X2
translation: MRSMPPSSPPSVFSPGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDVNDKRQVSREQGEKLAIGFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQDSNQGVKITPDQQKKSSFFRCALL
SIO_010081: RAB8A
subclass of: SO_0000673
so part of: RAB8A
location: join(65077..65109,66395..66468,69648..69708,76395..76472,78133..78222,80485..80550,81282..81332,82602..82694)
location: region:65077-82694:1
so has part: feature:65077-65109:1:exon
so has part: feature:66395-66468:1:exon
so has part: feature:69648-69708:1:exon
so has part: feature:76395-76472:1:exon
so has part: feature:78133-78222:1:exon
so has part: feature:80485-80550:1:exon
so has part: feature:81282-81332:1:exon
so has part: feature:82602-82694:1:exon

XP_030395949.1
type: Protein
SIO_000068: ncbiprotein

position:65077:1
position: 65077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65077-65109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66395-66468:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69648-69708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76395-76472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78133-78222:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80485-80550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81282-81332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82602-82694:1:exon

CIB3
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: CIB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(100138..107025)
location: region:100138-107025:-1
so has part: feature:100138-107025:-1:exon
subclass of: SO_0000010

115638491
type: Gene
SIO_000068: ncbigene

position:100138:-1
position: 100138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107025:-1
position: 107025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100138-107025:-1:exon

CIB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CIB3
product: calcium and integrin binding family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030540090.1
SIO_010081: CIB3
subclass of: SO_0000673
so part of: CIB3
location: complement(join(100138..100603,101361..101556,104950..105097,106869..107025))
location: region:100138-107025:-1
so has part: feature:106869-107025:-1:exon
so has part: feature:104950-105097:-1:exon
so has part: feature:101361-101556:-1:exon
so has part: feature:100138-100603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106869-107025:-1:exon

position:106869:-1
position: 106869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104950-105097:-1:exon

position:104950:-1
position: 104950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105097:-1
position: 105097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101361-101556:-1:exon

position:101361:-1
position: 101361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101556:-1
position: 101556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:100138-100603:-1:exon

position:100603:-1
position: 100603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CIB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CIB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium and integrin-binding family member 3
translation: MAELKDNPFRQRIAEVFSEDGEGNMTLDDFLDMFSVLSEMAPRDLKAYYAFKIYDFNNDDYICKSDLEKTVNKLTRNELTLEEVCLVCDKVIDEADQDNDGRLSVEDFQHMIARAPDFLSTFHIRI
SIO_010081: CIB3
subclass of: SO_0000673
so part of: CIB3
location: complement(join(100582..100603,101361..101556,104950..105097,106869..106883))
location: region:100582-106883:-1
so has part: feature:106869-106883:-1:exon
so has part: feature:104950-105097:-1:exon
so has part: feature:101361-101556:-1:exon
so has part: feature:100582-100603:-1:exon

XP_030395950.1
type: Protein
SIO_000068: ncbiprotein

position:100582:-1
position: 100582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106883:-1
position: 106883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106869-106883:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104950-105097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101361-101556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100582-100603:-1:exon

FAM32A
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: FAM32A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 115487..118764
location: region:115487-118764:1
so has part: feature:115487-118764:1:exon
subclass of: SO_0000010

115638492
type: Gene
SIO_000068: ncbigene

position:115487:1
position: 115487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118764:1
position: 118764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115487-118764:1:exon

FAM32A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: FAM32A
product: family with sequence similarity 32 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_030540092.1
SIO_010081: FAM32A
subclass of: SO_0000673
so part of: FAM32A
location: join(115487..115616,115702..115843,116085..116138,118303..118764)
location: region:115487-118764:1
so has part: feature:115487-115616:1:exon
so has part: feature:115702-115843:1:exon
so has part: feature:116085-116138:1:exon
so has part: feature:118303-118764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115487-115616:1:exon

position:115616:1
position: 115616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115702-115843:1:exon

position:115702:1
position: 115702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115843:1
position: 115843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116085-116138:1:exon

position:116085:1
position: 116085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116138:1
position: 116138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118303-118764:1:exon

position:118303:1
position: 118303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM32A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: FAM32A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM32A
translation: MAEYESVQRAPLRLKGSGAAPALGKRKKKKAAKDKSKILEQIVSSKKQEEEKKRALDKRTPAQLAYEKMQEKRQMERILKKASKTHKQRVEDFNRHLDALTEHYDIPKVSWTK
SIO_010081: FAM32A
subclass of: SO_0000673
so part of: FAM32A
location: join(115540..115616,115702..115843,116085..116138,118303..118371)
location: region:115540-118371:1
so has part: feature:115540-115616:1:exon
so has part: feature:115702-115843:1:exon
so has part: feature:116085-116138:1:exon
so has part: feature:118303-118371:1:exon

XP_030395952.1
type: Protein
SIO_000068: ncbiprotein

position:115540:1
position: 115540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118371:1
position: 118371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115540-115616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115702-115843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116085-116138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118303-118371:1:exon

AP1M1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: AP1M1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 118867..145230
location: region:118867-145230:1
so has part: feature:118867-145230:1:exon
subclass of: SO_0000010

115638494
type: Gene
SIO_000068: ncbigene

position:118867:1
position: 118867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145230:1
position: 145230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118867-145230:1:exon

AP1M1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: AP1M1
product: adaptor related protein complex 1 subunit mu 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030540094.1
SIO_010081: AP1M1
subclass of: SO_0000673
so part of: AP1M1
location: join(118867..120161,121235..121391,124200..124267,127482..127612,128773..128923,134700..134826,136313..136454,137880..137942,139674..139840,140258..140383,141665..141740,142609..145230)
location: region:118867-145230:1
so has part: feature:118867-120161:1:exon
so has part: feature:121235-121391:1:exon
so has part: feature:124200-124267:1:exon
so has part: feature:127482-127612:1:exon
so has part: feature:128773-128923:1:exon
so has part: feature:134700-134826:1:exon
so has part: feature:136313-136454:1:exon
so has part: feature:137880-137942:1:exon
so has part: feature:139674-139840:1:exon
so has part: feature:140258-140383:1:exon
so has part: feature:141665-141740:1:exon
so has part: feature:142609-145230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118867-120161:1:exon

position:120161:1
position: 120161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121235-121391:1:exon

position:121235:1
position: 121235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121391:1
position: 121391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124200-124267:1:exon

position:124200:1
position: 124200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124267:1
position: 124267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:127482-127612:1:exon

position:127482:1
position: 127482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127612:1
position: 127612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:128773-128923:1:exon

position:128773:1
position: 128773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128923:1
position: 128923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:134700-134826:1:exon

position:134700:1
position: 134700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134826:1
position: 134826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:136313-136454:1:exon

position:136313:1
position: 136313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136454:1
position: 136454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:137880-137942:1:exon

position:137880:1
position: 137880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137942:1
position: 137942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:139674-139840:1:exon

position:139674:1
position: 139674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139840:1
position: 139840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:140258-140383:1:exon

position:140258:1
position: 140258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140383:1
position: 140383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:141665-141740:1:exon

position:141665:1
position: 141665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141740:1
position: 141740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:142609-145230:1:exon

position:142609:1
position: 142609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AP1M1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: AP1M1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 5 bases in 4 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:139680..139682,aa:OTHER)
product: LOW QUALITY PROTEIN: AP-1 complex subunit mu-1
translation: MLQWGKCRSRPRALRPSSEPVTGARPRPPQRCPASLCHQLSGSGQADARSTLTHFPLSGYRNYRQARARRARMSLTPQSLPLLGMFLLEGLRQVLPPSLASASQRCHSSDVPRSAISFRPRSDCEPASSFAAFPAGGGGKGGLRAEAVAAAFPAGSASWPGFWERCAGRRRAPGGAMSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKKKCFWDVIESVNLLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKSKSVELEDVKFHQCVRLSRFENDRTIXFHPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYFLXQKSQFKRRSTXNNVEIHSPSSNDADSPKFKTTVGSVKWVPEKREIVWSXKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRTQ
SIO_010081: AP1M1
subclass of: SO_0000673
so part of: AP1M1
location: join(119592..120161,121235..121391,124200..124267,127482..127612,128773..128923,134700..134826,136313..136454,137880..137942,139674..139840,140258..140383,141665..141740,142609..142631)
location: region:119592-142631:1
so has part: feature:119592-120161:1:exon
so has part: feature:121235-121391:1:exon
so has part: feature:124200-124267:1:exon
so has part: feature:127482-127612:1:exon
so has part: feature:128773-128923:1:exon
so has part: feature:134700-134826:1:exon
so has part: feature:136313-136454:1:exon
so has part: feature:137880-137942:1:exon
so has part: feature:139674-139840:1:exon
so has part: feature:140258-140383:1:exon
so has part: feature:141665-141740:1:exon
so has part: feature:142609-142631:1:exon

XP_030395954.1
type: Protein
SIO_000068: ncbiprotein

position:119592:1
position: 119592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142631:1
position: 142631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119592-120161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121235-121391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124200-124267:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127482-127612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128773-128923:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134700-134826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136313-136454:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:137880-137942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:139674-139840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:140258-140383:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:141665-141740:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:142609-142631:1:exon

LOC115638497
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 155626..162493
location: region:155626-162493:1
so has part: feature:155626-162493:1:exon
subclass of: SO_0000011

115638497
type: Gene
SIO_000068: ncbigene

position:155626:1
position: 155626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162493:1
position: 162493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155626-162493:1:exon

LOC115638497
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638497
product: uncharacterized LOC115638497
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997470.1
SIO_010081: LOC115638497
subclass of: SO_0000673
so part of: LOC115638497
location: join(155626..155979,158320..158741,159281..162493)
location: region:155626-162493:1
so has part: feature:155626-155979:1:exon
so has part: feature:158320-158741:1:exon
so has part: feature:159281-162493:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155626-155979:1:exon

position:155979:1
position: 155979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158320-158741:1:exon

position:158320:1
position: 158320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158741:1
position: 158741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:159281-162493:1:exon

position:159281:1
position: 159281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLF2
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: KLF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 189205..192147
location: region:189205-192147:1
so has part: feature:189205-192147:1:exon
subclass of: SO_0000010

115638483
type: Gene
SIO_000068: ncbigene

position:189205:1
position: 189205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192147:1
position: 192147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189205-192147:1:exon

KLF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: KLF2
product: Kruppel like factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030540076.1
SIO_010081: KLF2
subclass of: SO_0000673
so part of: KLF2
location: join(189205..189348,189756..190674,191242..192147)
location: region:189205-192147:1
so has part: feature:189205-189348:1:exon
so has part: feature:189756-190674:1:exon
so has part: feature:191242-192147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189205-189348:1:exon

position:189348:1
position: 189348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:189756-190674:1:exon

position:189756:1
position: 189756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190674:1
position: 190674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:191242-192147:1:exon

position:191242:1
position: 191242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: KLF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 2
translation: MALSDTTLPSFATFASPCREKTFHERWKCDQEDKAPVNSCTMPELRPGLGSLSPRKEDEDLNNVLDFILSMGNDNFSPNSPSVDYPSAQTASSSFYQTNPSSGCYSSLEQSNPPPYNSSLMSEMIRSEMDSNFCLPNHVQGQFFVTSSFGSPHFVDNIKPEPDMDSYGPVMGLVPQTCPKIKQEGNATCMMAYEQPRMASSPQIPGTETPPLSPDDLMVTDCQAQMICPSSVSFQQSYHPATGFHHHQTHFQYQSASQFGLFEDSLPLQPSAPRGMLTPPSSPLELMDSKPKRGRRSWPRKRTATHTCTYAGCGKTYTKSSHLKAHLRTHTGEKPYHCNWEGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRSDHLALHMKRHM
SIO_010081: KLF2
subclass of: SO_0000673
so part of: KLF2
location: join(189274..189348,189756..190674,191242..191417)
location: region:189274-191417:1
so has part: feature:189274-189348:1:exon
so has part: feature:189756-190674:1:exon
so has part: feature:191242-191417:1:exon

XP_030395936.1
type: Protein
SIO_000068: ncbiprotein

position:189274:1
position: 189274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191417:1
position: 191417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189274-189348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:189756-190674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191242-191417:1:exon

EPS15L1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: EPS15L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(205120..286828)
location: region:205120-286828:-1
so has part: feature:205120-286828:-1:exon
subclass of: SO_0000010

115638477
type: Gene
SIO_000068: ncbigene

position:205120:-1
position: 205120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286828:-1
position: 286828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205120-286828:-1:exon

EPS15L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: EPS15L1
product: epidermal growth factor receptor pathway substrate 15 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030540065.1
SIO_010081: EPS15L1
subclass of: SO_0000673
so part of: EPS15L1
location: complement(join(205120..206626,212466..212671,227116..227248,232383..232465,234254..234314,236866..237002,237480..237530,237898..238024,240177..240341,240732..240929,256135..256296,256925..256997,257775..257860,264883..265039,266876..267033,267673..267909,268311..268370,269759..269884,270995..271057,271426..271521,273211..273258,274624..274713,274908..274949,286752..286825))
location: region:205120-286825:-1
so has part: feature:286752-286825:-1:exon
so has part: feature:274908-274949:-1:exon
so has part: feature:274624-274713:-1:exon
so has part: feature:273211-273258:-1:exon
so has part: feature:271426-271521:-1:exon
so has part: feature:270995-271057:-1:exon
so has part: feature:269759-269884:-1:exon
so has part: feature:268311-268370:-1:exon
so has part: feature:267673-267909:-1:exon
so has part: feature:266876-267033:-1:exon
so has part: feature:264883-265039:-1:exon
so has part: feature:257775-257860:-1:exon
so has part: feature:256925-256997:-1:exon
so has part: feature:256135-256296:-1:exon
so has part: feature:240732-240929:-1:exon
so has part: feature:240177-240341:-1:exon
so has part: feature:237898-238024:-1:exon
so has part: feature:237480-237530:-1:exon
so has part: feature:236866-237002:-1:exon
so has part: feature:234254-234314:-1:exon
so has part: feature:232383-232465:-1:exon
so has part: feature:227116-227248:-1:exon
so has part: feature:212466-212671:-1:exon
so has part: feature:205120-206626:-1:exon

position:286825:-1
position: 286825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286752-286825:-1:exon

position:286752:-1
position: 286752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274908-274949:-1:exon

position:274908:-1
position: 274908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274949:-1
position: 274949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:274624-274713:-1:exon

position:274624:-1
position: 274624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274713:-1
position: 274713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:273211-273258:-1:exon

position:273211:-1
position: 273211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273258:-1
position: 273258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:271426-271521:-1:exon

position:271426:-1
position: 271426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271521:-1
position: 271521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:270995-271057:-1:exon

position:270995:-1
position: 270995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271057:-1
position: 271057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:269759-269884:-1:exon

position:269759:-1
position: 269759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269884:-1
position: 269884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:268311-268370:-1:exon

position:268311:-1
position: 268311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268370:-1
position: 268370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:267673-267909:-1:exon

position:267673:-1
position: 267673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267909:-1
position: 267909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:266876-267033:-1:exon

position:266876:-1
position: 266876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267033:-1
position: 267033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:264883-265039:-1:exon

position:264883:-1
position: 264883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265039:-1
position: 265039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:257775-257860:-1:exon

position:257775:-1
position: 257775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257860:-1
position: 257860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:256925-256997:-1:exon

position:256925:-1
position: 256925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256997:-1
position: 256997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:256135-256296:-1:exon

position:256135:-1
position: 256135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256296:-1
position: 256296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:240732-240929:-1:exon

position:240732:-1
position: 240732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240929:-1
position: 240929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:240177-240341:-1:exon

position:240177:-1
position: 240177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240341:-1
position: 240341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:237898-238024:-1:exon

position:237898:-1
position: 237898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238024:-1
position: 238024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:237480-237530:-1:exon

position:237480:-1
position: 237480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237530:-1
position: 237530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:236866-237002:-1:exon

position:236866:-1
position: 236866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237002:-1
position: 237002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:234254-234314:-1:exon

position:234254:-1
position: 234254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234314:-1
position: 234314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:232383-232465:-1:exon

position:232383:-1
position: 232383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232465:-1
position: 232465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:227116-227248:-1:exon

position:227116:-1
position: 227116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227248:-1
position: 227248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:212466-212671:-1:exon

position:212466:-1
position: 212466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212671:-1
position: 212671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:205120-206626:-1:exon

position:206626:-1
position: 206626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPS15L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: EPS15L1
product: epidermal growth factor receptor pathway substrate 15 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030540064.1
SIO_010081: EPS15L1
subclass of: SO_0000673
so part of: EPS15L1
location: complement(join(205120..206626,212466..212671,227116..227248,232383..232465,234254..234314,236866..237002,237480..237530,237898..238024,240177..240341,240732..240929,256135..256296,256925..256997,257775..257860,259988..260050,264883..265039,266876..267033,267673..267909,268311..268370,269759..269884,270995..271057,271426..271521,273211..273258,274624..274713,274908..274949,286752..286825))
location: region:205120-286825:-1
so has part: feature:286752-286825:-1:exon
so has part: feature:274908-274949:-1:exon
so has part: feature:274624-274713:-1:exon
so has part: feature:273211-273258:-1:exon
so has part: feature:271426-271521:-1:exon
so has part: feature:270995-271057:-1:exon
so has part: feature:269759-269884:-1:exon
so has part: feature:268311-268370:-1:exon
so has part: feature:267673-267909:-1:exon
so has part: feature:266876-267033:-1:exon
so has part: feature:264883-265039:-1:exon
so has part: feature:259988-260050:-1:exon
so has part: feature:257775-257860:-1:exon
so has part: feature:256925-256997:-1:exon
so has part: feature:256135-256296:-1:exon
so has part: feature:240732-240929:-1:exon
so has part: feature:240177-240341:-1:exon
so has part: feature:237898-238024:-1:exon
so has part: feature:237480-237530:-1:exon
so has part: feature:236866-237002:-1:exon
so has part: feature:234254-234314:-1:exon
so has part: feature:232383-232465:-1:exon
so has part: feature:227116-227248:-1:exon
so has part: feature:212466-212671:-1:exon
so has part: feature:205120-206626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286752-286825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274908-274949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274624-274713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273211-273258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271426-271521:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270995-271057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269759-269884:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268311-268370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267673-267909:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:266876-267033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264883-265039:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259988-260050:-1:exon

position:259988:-1
position: 259988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260050:-1
position: 260050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:257775-257860:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256925-256997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:256135-256296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240732-240929:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:240177-240341:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:237898-238024:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:237480-237530:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:236866-237002:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:234254-234314:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:232383-232465:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:227116-227248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:212466-212671:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:205120-206626:-1:exon

EPS15L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: EPS15L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epidermal growth factor receptor substrate 15-like 1 isoform X2
translation: MAALIPHSQQLLTGNPLYETYYKQVDPTYTGRVGASEAALFLKKSGLPDIILGKIWDLADPEGKGYLDKQGFYVALRLVACAQNGHDVNLSNLNLTIPPPKFHDTSSPLLITPPSTEAYWAVRVEEKAKFDGIFESLLPVNGLLSGDKVKPVLMNSKLPLDILGRVWDLSDIDKDGHLDKDEFAVAMHLVYRALEKEPVPSVLPPTLIPPSKRKKAPVFPGAVPVLPASPPPKDSLRSTPSHGSVNSLNSTGSLSPKHSIKQTQPSVNWVVPISDKVRYDEIFLKTDMDMDGYVSGQEVKDIFMHSGLSQNLLAHIWALADTRQMGKLSKDQFALAMYFIQQKVSKGIDPPQVLSPDMIPPGERNTPIQDSSSSVGSGEFTGVKEIDDISQEIAHLQREKYSLEQDIREKEESIRQKTNEVQELQNDLDREISNLQELEAQKQDAQDRLDEMDQQKAKLKDMLNDVRQKCQEETQMISSLKMEIQSQESDLKSQEDDLNRAKAELNRLQQEETQLEQSIQAGKVQLETIIKSLKSTQEEINQARSKLSQLQESHQEISKSIEQNNDALNGIHGGSMTNLADISEGIAQKERGNFGAMDDPFKNKALLFSNNTQELHTDPFQAEDPFRSDPFKGADPFKGNDPFQNDPFSDQPPVSTDPFGGDPFKESDPFHSSVSEEFFKKQVKTDPFTSDPFTKKPTLPSKPDPFESSDPFTSSSLSSKGPDPFGTLDPFGSGAFSSNEGFADFSQMSKPTASDPFTSSFGGMGFSDDPFKSKPDTPALPPKKNVPPRPKPPSGKSTPVNQLGSADFTKPNDPFQPFGAESSDPFQTKKGFGDPFSGKDPFAPSSSSKTSKDSSLGFADFSSFGNEEQQLAWAKRESEKAEQERLARLRRQEQEDLELAIALSKADMPDS
SIO_010081: EPS15L1
subclass of: SO_0000673
so part of: EPS15L1
location: complement(join(206480..206626,212466..212671,227116..227248,232383..232465,234254..234314,236866..237002,237480..237530,237898..238024,240177..240341,240732..240929,256135..256296,256925..256997,257775..257860,264883..265039,266876..267033,267673..267909,268311..268370,269759..269884,270995..271057,271426..271521,273211..273258,274624..274713,274908..274949,286752..286781))
location: region:206480-286781:-1
so has part: feature:286752-286781:-1:exon
so has part: feature:274908-274949:-1:exon
so has part: feature:274624-274713:-1:exon
so has part: feature:273211-273258:-1:exon
so has part: feature:271426-271521:-1:exon
so has part: feature:270995-271057:-1:exon
so has part: feature:269759-269884:-1:exon
so has part: feature:268311-268370:-1:exon
so has part: feature:267673-267909:-1:exon
so has part: feature:266876-267033:-1:exon
so has part: feature:264883-265039:-1:exon
so has part: feature:257775-257860:-1:exon
so has part: feature:256925-256997:-1:exon
so has part: feature:256135-256296:-1:exon
so has part: feature:240732-240929:-1:exon
so has part: feature:240177-240341:-1:exon
so has part: feature:237898-238024:-1:exon
so has part: feature:237480-237530:-1:exon
so has part: feature:236866-237002:-1:exon
so has part: feature:234254-234314:-1:exon
so has part: feature:232383-232465:-1:exon
so has part: feature:227116-227248:-1:exon
so has part: feature:212466-212671:-1:exon
so has part: feature:206480-206626:-1:exon

XP_030395925.1
type: Protein
SIO_000068: ncbiprotein

position:206480:-1
position: 206480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286781:-1
position: 286781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286752-286781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274908-274949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274624-274713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273211-273258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271426-271521:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270995-271057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269759-269884:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268311-268370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267673-267909:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:266876-267033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264883-265039:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257775-257860:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:256925-256997:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256135-256296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:240732-240929:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240177-240341:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:237898-238024:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:237480-237530:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:236866-237002:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:234254-234314:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:232383-232465:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:227116-227248:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:212466-212671:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:206480-206626:-1:exon

EPS15L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: EPS15L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epidermal growth factor receptor substrate 15-like 1 isoform X1
translation: MAALIPHSQQLLTGNPLYETYYKQVDPTYTGRVGASEAALFLKKSGLPDIILGKIWDLADPEGKGYLDKQGFYVALRLVACAQNGHDVNLSNLNLTIPPPKFHDTSSPLLITPPSTEAYWAVRVEEKAKFDGIFESLLPVNGLLSGDKVKPVLMNSKLPLDILGRVWDLSDIDKDGHLDKDEFAVAMHLVYRALEKEPVPSVLPPTLIPPSKRKKAPVFPGAVPVLPASPPPKDSLRSTPSHGSVNSLNSTGSLSPKHSIKQTQPSVNWVVPISDKVRYDEIFLKTDMDMDGYVSGQEVKDIFMHSGLSQNLLAHIWALADTRQMGKLSKDQFALAMYFIQQKVSKGIDPPQVLSPDMIPPGERNTPIQTLSGYLTTVGTEISALTEMRRDSSSSVGSGEFTGVKEIDDISQEIAHLQREKYSLEQDIREKEESIRQKTNEVQELQNDLDREISNLQELEAQKQDAQDRLDEMDQQKAKLKDMLNDVRQKCQEETQMISSLKMEIQSQESDLKSQEDDLNRAKAELNRLQQEETQLEQSIQAGKVQLETIIKSLKSTQEEINQARSKLSQLQESHQEISKSIEQNNDALNGIHGGSMTNLADISEGIAQKERGNFGAMDDPFKNKALLFSNNTQELHTDPFQAEDPFRSDPFKGADPFKGNDPFQNDPFSDQPPVSTDPFGGDPFKESDPFHSSVSEEFFKKQVKTDPFTSDPFTKKPTLPSKPDPFESSDPFTSSSLSSKGPDPFGTLDPFGSGAFSSNEGFADFSQMSKPTASDPFTSSFGGMGFSDDPFKSKPDTPALPPKKNVPPRPKPPSGKSTPVNQLGSADFTKPNDPFQPFGAESSDPFQTKKGFGDPFSGKDPFAPSSSSKTSKDSSLGFADFSSFGNEEQQLAWAKRESEKAEQERLARLRRQEQEDLELAIALSKADMPDS
SIO_010081: EPS15L1
subclass of: SO_0000673
so part of: EPS15L1
location: complement(join(206480..206626,212466..212671,227116..227248,232383..232465,234254..234314,236866..237002,237480..237530,237898..238024,240177..240341,240732..240929,256135..256296,256925..256997,257775..257860,259988..260050,264883..265039,266876..267033,267673..267909,268311..268370,269759..269884,270995..271057,271426..271521,273211..273258,274624..274713,274908..274949,286752..286781))
location: region:206480-286781:-1
so has part: feature:286752-286781:-1:exon
so has part: feature:274908-274949:-1:exon
so has part: feature:274624-274713:-1:exon
so has part: feature:273211-273258:-1:exon
so has part: feature:271426-271521:-1:exon
so has part: feature:270995-271057:-1:exon
so has part: feature:269759-269884:-1:exon
so has part: feature:268311-268370:-1:exon
so has part: feature:267673-267909:-1:exon
so has part: feature:266876-267033:-1:exon
so has part: feature:264883-265039:-1:exon
so has part: feature:259988-260050:-1:exon
so has part: feature:257775-257860:-1:exon
so has part: feature:256925-256997:-1:exon
so has part: feature:256135-256296:-1:exon
so has part: feature:240732-240929:-1:exon
so has part: feature:240177-240341:-1:exon
so has part: feature:237898-238024:-1:exon
so has part: feature:237480-237530:-1:exon
so has part: feature:236866-237002:-1:exon
so has part: feature:234254-234314:-1:exon
so has part: feature:232383-232465:-1:exon
so has part: feature:227116-227248:-1:exon
so has part: feature:212466-212671:-1:exon
so has part: feature:206480-206626:-1:exon

XP_030395924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286752-286781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274908-274949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274624-274713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273211-273258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271426-271521:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270995-271057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269759-269884:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268311-268370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267673-267909:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:266876-267033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264883-265039:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259988-260050:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:257775-257860:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256925-256997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:256135-256296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240732-240929:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:240177-240341:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:237898-238024:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:237480-237530:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:236866-237002:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:234254-234314:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:232383-232465:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:227116-227248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:212466-212671:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:206480-206626:-1:exon

EPS15L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: EPS15L1
product: epidermal growth factor receptor pathway substrate 15 like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030540066.1
SIO_010081: EPS15L1
subclass of: SO_0000673
so part of: EPS15L1
location: complement(join(206534..206626,227116..227248,232383..232465,234254..234314,236866..237002,237480..237530,237898..238024,240177..240341,240732..240929,256135..256296,256925..256997,257775..257860,259988..260050,264883..265039,266876..267033,267673..267909,268311..268370,269759..269884,270995..271057,271426..271521,273211..273258,274624..274713,274908..274949,286752..286826))
location: region:206534-286826:-1
so has part: feature:286752-286826:-1:exon
so has part: feature:274908-274949:-1:exon
so has part: feature:274624-274713:-1:exon
so has part: feature:273211-273258:-1:exon
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so has part: feature:232383-232465:-1:exon
so has part: feature:227116-227248:-1:exon
so has part: feature:206534-206626:-1:exon

position:206534:-1
position: 206534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286826:-1
position: 286826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286752-286826:-1:exon

urn:…
SIO_000300: 2
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 9
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urn:…
SIO_000300: 12
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SIO_000300: 14
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SIO_000300: 19
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SIO_000300: 20
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SIO_000300: 21
SIO_000628: feature:234254-234314:-1:exon

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SIO_000300: 22
SIO_000628: feature:232383-232465:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:227116-227248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:206534-206626:-1:exon

EPS15L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: EPS15L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epidermal growth factor receptor substrate 15-like 1 isoform X3
translation: MAALIPHSQQLLTGNPLYETYYKQVDPTYTGRVGASEAALFLKKSGLPDIILGKIWDLADPEGKGYLDKQGFYVALRLVACAQNGHDVNLSNLNLTIPPPKFHDTSSPLLITPPSTEAYWAVRVEEKAKFDGIFESLLPVNGLLSGDKVKPVLMNSKLPLDILGRVWDLSDIDKDGHLDKDEFAVAMHLVYRALEKEPVPSVLPPTLIPPSKRKKAPVFPGAVPVLPASPPPKDSLRSTPSHGSVNSLNSTGSLSPKHSIKQTQPSVNWVVPISDKVRYDEIFLKTDMDMDGYVSGQEVKDIFMHSGLSQNLLAHIWALADTRQMGKLSKDQFALAMYFIQQKVSKGIDPPQVLSPDMIPPGERNTPIQTLSGYLTTVGTEISALTEMRRDSSSSVGSGEFTGVKEIDDISQEIAHLQREKYSLEQDIREKEESIRQKTNEVQELQNDLDREISNLQELEAQKQDAQDRLDEMDQQKAKLKDMLNDVRQKCQEETQMISSLKMEIQSQESDLKSQEDDLNRAKAELNRLQQEETQLEQSIQAGKVQLETIIKSLKSTQEEINQARSKLSQLQESHQEISKSIEQNNDALNGIHGGSMTNLADISEGIAQKERGNFGAMDDPFKNKALLFSNNTQELHTDPFQAEDPFRSDPFKGADPFKGNDPFQNDPFSDQPPVSTDPFGGDPFKESDPFHSSVSEEFFKKQVKTDPFTSDPFTKKPTLPSKPDPFESSDPFTSSSLSSKGPDPFGTLDPFGSGAFSSNEGFADFSQMSKPTASDPFTSSFGGMGFSDDPFKSKPDTPALPPKKNVPPRPKPPSVWK
SIO_010081: EPS15L1
subclass of: SO_0000673
so part of: EPS15L1
location: complement(join(206616..206626,227116..227248,232383..232465,234254..234314,236866..237002,237480..237530,237898..238024,240177..240341,240732..240929,256135..256296,256925..256997,257775..257860,259988..260050,264883..265039,266876..267033,267673..267909,268311..268370,269759..269884,270995..271057,271426..271521,273211..273258,274624..274713,274908..274949,286752..286781))
location: region:206616-286781:-1
so has part: feature:286752-286781:-1:exon
so has part: feature:274908-274949:-1:exon
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so has part: feature:232383-232465:-1:exon
so has part: feature:227116-227248:-1:exon
so has part: feature:206616-206626:-1:exon

XP_030395926.1
type: Protein
SIO_000068: ncbiprotein

position:206616:-1
position: 206616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286752-286781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274908-274949:-1:exon

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SIO_000300: 3
SIO_000628: feature:274624-274713:-1:exon

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SIO_000300: 4
SIO_000628: feature:273211-273258:-1:exon

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SIO_000300: 5
SIO_000628: feature:271426-271521:-1:exon

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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 10
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SIO_000628: feature:264883-265039:-1:exon

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SIO_000300: 12
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SIO_000300: 14
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SIO_000300: 15
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SIO_000300: 16
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SIO_000300: 17
SIO_000628: feature:240177-240341:-1:exon

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SIO_000300: 18
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urn:…
SIO_000300: 19
SIO_000628: feature:237480-237530:-1:exon

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SIO_000300: 20
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SIO_000300: 22
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SIO_000300: 23
SIO_000628: feature:227116-227248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:206616-206626:-1:exon

EPS15L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: EPS15L1
product: epidermal growth factor receptor pathway substrate 15 like 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540068.1
SIO_010081: EPS15L1
subclass of: SO_0000673
so part of: EPS15L1
location: complement(join(227118..227248,234254..234314,236926..237002,237480..237530,237898..238024,240177..240341,240732..240929,256135..256296,256925..256997,257775..257860,259988..260050,264883..265039,266876..267033,267673..267909,268311..268370,269759..269884,270995..271057,271426..271521,273211..273258,274624..274713,274908..274949,286752..286828))
location: region:227118-286828:-1
so has part: feature:286752-286828:-1:exon
so has part: feature:274908-274949:-1:exon
so has part: feature:274624-274713:-1:exon
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so has part: feature:237480-237530:-1:exon
so has part: feature:236926-237002:-1:exon
so has part: feature:234254-234314:-1:exon
so has part: feature:227118-227248:-1:exon

position:227118:-1
position: 227118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286752-286828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274908-274949:-1:exon

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SIO_000300: 4
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SIO_000628: feature:237480-237530:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:236926-237002:-1:exon

position:236926:-1
position: 236926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:234254-234314:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:227118-227248:-1:exon

EPS15L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: EPS15L1
product: epidermal growth factor receptor pathway substrate 15 like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030540067.1
SIO_010081: EPS15L1
subclass of: SO_0000673
so part of: EPS15L1
location: complement(join(227118..227248,234254..234314,236866..237002,237480..237530,237898..238024,240177..240341,240732..240929,256135..256296,256925..256997,257775..257860,259988..260050,264883..265039,266876..267033,267673..267909,268311..268370,269759..269884,270995..271057,271426..271521,273211..273258,274624..274713,274908..274949,286752..286827))
location: region:227118-286827:-1
so has part: feature:286752-286827:-1:exon
so has part: feature:274908-274949:-1:exon
so has part: feature:274624-274713:-1:exon
so has part: feature:273211-273258:-1:exon
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position:286827:-1
position: 286827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286752-286827:-1:exon

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urn:…
SIO_000300: 18
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urn:…
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:234254-234314:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:227118-227248:-1:exon

EPS15L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: EPS15L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epidermal growth factor receptor substrate 15-like 1 isoform X5
translation: MAALIPHSQQLLTGNPLYETYYKQVDPTYTGRVGASEAALFLKKSGLPDIILGKIWDLADPEGKGYLDKQGFYVALRLVACAQNGHDVNLSNLNLTIPPPKFHDTSSPLLITPPSTEAYWAVRVEEKAKFDGIFESLLPVNGLLSGDKVKPVLMNSKLPLDILGRVWDLSDIDKDGHLDKDEFAVAMHLVYRALEKEPVPSVLPPTLIPPSKRKKAPVFPGAVPVLPASPPPKDSLRSTPSHGSVNSLNSTGSLSPKHSIKQTQPSVNWVVPISDKVRYDEIFLKTDMDMDGYVSGQEVKDIFMHSGLSQNLLAHIWALADTRQMGKLSKDQFALAMYFIQQKVSKGIDPPQVLSPDMIPPGERNTPIQTLSGYLTTVGTEISALTEMRRDSSSSVGSGEFTGVKEIDDISQEIAHLQREKYSLEQDIREKEESIRQKTNEVQELQNDLDREISNLQELEAQKQDAQDRLDEMDQQKAKLKDMLNDVRQKCQEETQMISSLKMEIQSQESDLKSQEDDLNRAKAELNRLQQEETQLEQSIQAGKVQLETIIKSLKSTQEEINQARSKLSQLQESHQEISKSIEQNNDALNGIHGGSMTNLADISEGIAQKERGNFGAMDDPFKNKALLFSNNTQELHTDPFQAEDPFRSDPFKGADPFKGNDPFQNDPFSDQPPVSTDPFGGDPFKESDPFHSSVSEEFFKKQPDPFESSDPFTSSSLSSKGPAYSFRPFHLLFWRDGILR
SIO_010081: EPS15L1
subclass of: SO_0000673
so part of: EPS15L1
location: complement(join(227193..227248,234254..234314,236926..237002,237480..237530,237898..238024,240177..240341,240732..240929,256135..256296,256925..256997,257775..257860,259988..260050,264883..265039,266876..267033,267673..267909,268311..268370,269759..269884,270995..271057,271426..271521,273211..273258,274624..274713,274908..274949,286752..286781))
location: region:227193-286781:-1
so has part: feature:286752-286781:-1:exon
so has part: feature:274908-274949:-1:exon
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so has part: feature:267673-267909:-1:exon
so has part: feature:266876-267033:-1:exon
so has part: feature:264883-265039:-1:exon
so has part: feature:259988-260050:-1:exon
so has part: feature:257775-257860:-1:exon
so has part: feature:256925-256997:-1:exon
so has part: feature:256135-256296:-1:exon
so has part: feature:240732-240929:-1:exon
so has part: feature:240177-240341:-1:exon
so has part: feature:237898-238024:-1:exon
so has part: feature:237480-237530:-1:exon
so has part: feature:236926-237002:-1:exon
so has part: feature:234254-234314:-1:exon
so has part: feature:227193-227248:-1:exon

XP_030395928.1
type: Protein
SIO_000068: ncbiprotein

position:227193:-1
position: 227193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286752-286781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274908-274949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274624-274713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273211-273258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271426-271521:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270995-271057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269759-269884:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268311-268370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267673-267909:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:266876-267033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264883-265039:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259988-260050:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:257775-257860:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256925-256997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:256135-256296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240732-240929:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:240177-240341:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:237898-238024:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:237480-237530:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:236926-237002:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:234254-234314:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:227193-227248:-1:exon

EPS15L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: EPS15L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epidermal growth factor receptor substrate 15-like 1 isoform X4
translation: MAALIPHSQQLLTGNPLYETYYKQVDPTYTGRVGASEAALFLKKSGLPDIILGKIWDLADPEGKGYLDKQGFYVALRLVACAQNGHDVNLSNLNLTIPPPKFHDTSSPLLITPPSTEAYWAVRVEEKAKFDGIFESLLPVNGLLSGDKVKPVLMNSKLPLDILGRVWDLSDIDKDGHLDKDEFAVAMHLVYRALEKEPVPSVLPPTLIPPSKRKKAPVFPGAVPVLPASPPPKDSLRSTPSHGSVNSLNSTGSLSPKHSIKQTQPSVNWVVPISDKVRYDEIFLKTDMDMDGYVSGQEVKDIFMHSGLSQNLLAHIWALADTRQMGKLSKDQFALAMYFIQQKVSKGIDPPQVLSPDMIPPGERNTPIQTLSGYLTTVGTEISALTEMRRDSSSSVGSGEFTGVKEIDDISQEIAHLQREKYSLEQDIREKEESIRQKTNEVQELQNDLDREISNLQELEAQKQDAQDRLDEMDQQKAKLKDMLNDVRQKCQEETQMISSLKMEIQSQESDLKSQEDDLNRAKAELNRLQQEETQLEQSIQAGKVQLETIIKSLKSTQEEINQARSKLSQLQESHQEISKSIEQNNDALNGIHGGSMTNLADISEGIAQKERGNFGAMDDPFKNKALLFSNNTQELHTDPFQAEDPFRSDPFKGADPFKGNDPFQNDPFSDQPPVSTDPFGGDPFKESDPFHSSVSEEFFKKQVKTDPFTSDPFTKKPTLPSKPDPFESSDPFTSSSLSSKGPAYSFRPFHLLFWRDGILR
SIO_010081: EPS15L1
subclass of: SO_0000673
so part of: EPS15L1
location: complement(join(227193..227248,234254..234314,236866..237002,237480..237530,237898..238024,240177..240341,240732..240929,256135..256296,256925..256997,257775..257860,259988..260050,264883..265039,266876..267033,267673..267909,268311..268370,269759..269884,270995..271057,271426..271521,273211..273258,274624..274713,274908..274949,286752..286781))
location: region:227193-286781:-1
so has part: feature:286752-286781:-1:exon
so has part: feature:274908-274949:-1:exon
so has part: feature:274624-274713:-1:exon
so has part: feature:273211-273258:-1:exon
so has part: feature:271426-271521:-1:exon
so has part: feature:270995-271057:-1:exon
so has part: feature:269759-269884:-1:exon
so has part: feature:268311-268370:-1:exon
so has part: feature:267673-267909:-1:exon
so has part: feature:266876-267033:-1:exon
so has part: feature:264883-265039:-1:exon
so has part: feature:259988-260050:-1:exon
so has part: feature:257775-257860:-1:exon
so has part: feature:256925-256997:-1:exon
so has part: feature:256135-256296:-1:exon
so has part: feature:240732-240929:-1:exon
so has part: feature:240177-240341:-1:exon
so has part: feature:237898-238024:-1:exon
so has part: feature:237480-237530:-1:exon
so has part: feature:236866-237002:-1:exon
so has part: feature:234254-234314:-1:exon
so has part: feature:227193-227248:-1:exon

XP_030395927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286752-286781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274908-274949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274624-274713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273211-273258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271426-271521:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270995-271057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269759-269884:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268311-268370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267673-267909:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:266876-267033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264883-265039:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259988-260050:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:257775-257860:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256925-256997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:256135-256296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240732-240929:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:240177-240341:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:237898-238024:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:237480-237530:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:236866-237002:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:234254-234314:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:227193-227248:-1:exon

CALR3
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: CALR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(290160..307711)
location: region:290160-307711:-1
so has part: feature:290160-307711:-1:exon
subclass of: SO_0000010

115638617
type: Gene
SIO_000068: ncbigene

position:290160:-1
position: 290160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307711:-1
position: 307711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290160-307711:-1:exon

CALR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CALR3
product: calreticulin 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030540450.1
SIO_010081: CALR3
subclass of: SO_0000673
so part of: CALR3
location: complement(join(290160..290469,291706..291798,295931..296074,296159..296272,297274..297483,300347..300441,301229..301432,304748..304849,306693..306847,307616..307711))
location: region:290160-307711:-1
so has part: feature:307616-307711:-1:exon
so has part: feature:306693-306847:-1:exon
so has part: feature:304748-304849:-1:exon
so has part: feature:301229-301432:-1:exon
so has part: feature:300347-300441:-1:exon
so has part: feature:297274-297483:-1:exon
so has part: feature:296159-296272:-1:exon
so has part: feature:295931-296074:-1:exon
so has part: feature:291706-291798:-1:exon
so has part: feature:290160-290469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307616-307711:-1:exon

position:307616:-1
position: 307616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:306693-306847:-1:exon

position:306693:-1
position: 306693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306847:-1
position: 306847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:304748-304849:-1:exon

position:304748:-1
position: 304748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304849:-1
position: 304849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:301229-301432:-1:exon

position:301229:-1
position: 301229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301432:-1
position: 301432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:300347-300441:-1:exon

position:300347:-1
position: 300347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300441:-1
position: 300441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:297274-297483:-1:exon

position:297274:-1
position: 297274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297483:-1
position: 297483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:296159-296272:-1:exon

position:296159:-1
position: 296159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296272:-1
position: 296272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:295931-296074:-1:exon

position:295931:-1
position: 295931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296074:-1
position: 296074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291706-291798:-1:exon

position:291706:-1
position: 291706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291798:-1
position: 291798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:290160-290469:-1:exon

position:290469:-1
position: 290469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CALR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CALR3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: calreticulin-3
translation: MWTYDTTYSNGSLLLWDLGASIVKIMGTTKPDLFPGCAGEYCFPAGGSGIGLDMGPLTRALLFWAALSAARAVVYFREQFMDGVKWQDRWMNSQYKSDYGKFRLTAGKFYGDAVRDKGLQTSENSKFYAISSRFKPFSNKGRSLVIQYTVKHEQKIDCGGGYIKIFSSNLDQKNMSGDSQYYIMFGPDICGSETKKVHVILNYKSKPHPMKKRIRCKVDGFTHLYTLILRPDQTYEVKIDNEIIESGNLEDDWNFLPPRKINDPTAKKPKDWDDVPQIDDPNDVKPEDWDEPEYILDTSAEKPEDWDNATNGEWQPPMIKNPLYRGEWKPRKIDNPNYKGVWPCPQIENPNYSPDFNIYSYENISIIGLDLWQVRAGTIFDNFLITDDEQYAEDFGDDTWGETKDPEEKMNIKQTEEEKKRERAKEEKRFRGRFNRKVKKRKESGKAKLNRITVKKEEL
SIO_010081: CALR3
subclass of: SO_0000673
so part of: CALR3
location: complement(join(290302..290469,291706..291798,295931..296074,296159..296272,297274..297483,300347..300441,301229..301432,304748..304849,306693..306847,307616..307711))
location: region:290302-307711:-1
so has part: feature:307616-307711:-1:exon
so has part: feature:306693-306847:-1:exon
so has part: feature:304748-304849:-1:exon
so has part: feature:301229-301432:-1:exon
so has part: feature:300347-300441:-1:exon
so has part: feature:297274-297483:-1:exon
so has part: feature:296159-296272:-1:exon
so has part: feature:295931-296074:-1:exon
so has part: feature:291706-291798:-1:exon
so has part: feature:290302-290469:-1:exon

XP_030396310.1
type: Protein
SIO_000068: ncbiprotein

position:290302:-1
position: 290302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307616-307711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306693-306847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304748-304849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301229-301432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300347-300441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297274-297483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296159-296272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295931-296074:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291706-291798:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290302-290469:-1:exon

C22H19orf44
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: C22H19orf44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 307108..316778
location: region:307108-316778:1
so has part: feature:307108-316778:1:exon
subclass of: SO_0000010

115638480
type: Gene
SIO_000068: ncbigene

position:307108:1
position: 307108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316778:1
position: 316778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307108-316778:1:exon

C22H19orf44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: C22H19orf44
product: chromosome 22 C19orf44 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030540073.1
SIO_010081: C22H19orf44
subclass of: SO_0000673
so part of: C22H19orf44
location: join(307108..307201,307936..308592,308900..309263,311299..311375,311771..312263,313901..313996,314119..314285,316311..316778)
location: region:307108-316778:1
so has part: feature:307108-307201:1:exon
so has part: feature:307936-308592:1:exon
so has part: feature:308900-309263:1:exon
so has part: feature:311299-311375:1:exon
so has part: feature:311771-312263:1:exon
so has part: feature:313901-313996:1:exon
so has part: feature:314119-314285:1:exon
so has part: feature:316311-316778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307108-307201:1:exon

position:307201:1
position: 307201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307936-308592:1:exon

position:307936:1
position: 307936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308592:1
position: 308592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308900-309263:1:exon

position:308900:1
position: 308900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309263:1
position: 309263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311299-311375:1:exon

position:311299:1
position: 311299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311375:1
position: 311375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:311771-312263:1:exon

position:311771:1
position: 311771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312263:1
position: 312263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:313901-313996:1:exon

position:313901:1
position: 313901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313996:1
position: 313996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:314119-314285:1:exon

position:314119:1
position: 314119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314285:1
position: 314285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:316311-316778:1:exon

position:316311:1
position: 316311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C22H19orf44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: C22H19orf44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf44 homolog
translation: MDSPHKKLTRAPTDSYSDLSIGNTEMGETDKNKDLKRKSLLETQFSHIRFLKKKQHGQRNQLNQNIRAVQEGNKHVAKKPLDTTSQVRSSAILRKLAQIESKIMTQKVQMDFSDTELDLKISDEENLSARSSLEESARGSRYLKKNDTVKENVTLSKVHFKGKDSCQTTKNKVPIRKQLSLDSDEEEMRQLLGSSLEFSSENENQKDVINFSKPDGKLFMKSKMKSPPRTSFPPKNQSSSTNLFSAPSLLGRSCQKRTSDRINPQTPSPPSGNLPRLTSMSFQSPTPLKDSIAETASLRMNHIKQSQVSLSERSEIKSLDELFSKAADTEDATSESSNDFRLNILSIDDLAPNVSGDREALKQMETDIQMAKKSDKDSEPNVFPVNNDQTPLKMVSVLTRTNAASDNDMEGEIMTEAEISEFLSGISTDYLSVRQVFPGPEESTVNSEYSEDFEKSLSLPVSETTDRRSLSEMSVGHSNSSVYSRKDLSPSLSSPQSKKKWHETVSRVTVKEMAVQTTASPFTYHWSKKDGTAILGPAVRCSYIDPVLIASHVVTMDALEALTGYSPAVFALNDMLKQHLILTQHFVETIRHLHLSLVESLENETFQYHTLAEAKEYIKSHKSPPLTIEQVLEEVQKMKEQ
SIO_010081: C22H19orf44
subclass of: SO_0000673
so part of: C22H19orf44
location: join(307942..308592,308900..309263,311299..311375,311771..312263,313901..313996,314119..314285,316311..316388)
location: region:307942-316388:1
so has part: feature:307942-308592:1:exon
so has part: feature:308900-309263:1:exon
so has part: feature:311299-311375:1:exon
so has part: feature:311771-312263:1:exon
so has part: feature:313901-313996:1:exon
so has part: feature:314119-314285:1:exon
so has part: feature:316311-316388:1:exon

XP_030395933.1
type: Protein
SIO_000068: ncbiprotein

position:307942:1
position: 307942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316388:1
position: 316388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307942-308592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308900-309263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311299-311375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311771-312263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313901-313996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:314119-314285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316311-316388:1:exon

CHERP
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: CHERP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(316889..335970)
location: region:316889-335970:-1
so has part: feature:316889-335970:-1:exon
subclass of: SO_0000010

115638479
type: Gene
SIO_000068: ncbigene

position:316889:-1
position: 316889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335970:-1
position: 335970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316889-335970:-1:exon

CHERP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CHERP
product: calcium homeostasis endoplasmic reticulum protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_030540071.1
SIO_010081: CHERP
subclass of: SO_0000673
so part of: CHERP
location: complement(join(316889..317756,319907..320092,322732..322826,323372..323488,324166..324315,324629..324715,324981..325114,325935..326173,327714..328110,328665..328843,330349..330583,331255..331344,331509..331620,332405..332556,333555..333692,334397..334578,335397..335570,335838..335970))
location: region:316889-335970:-1
so has part: feature:335838-335970:-1:exon
so has part: feature:335397-335570:-1:exon
so has part: feature:334397-334578:-1:exon
so has part: feature:333555-333692:-1:exon
so has part: feature:332405-332556:-1:exon
so has part: feature:331509-331620:-1:exon
so has part: feature:331255-331344:-1:exon
so has part: feature:330349-330583:-1:exon
so has part: feature:328665-328843:-1:exon
so has part: feature:327714-328110:-1:exon
so has part: feature:325935-326173:-1:exon
so has part: feature:324981-325114:-1:exon
so has part: feature:324629-324715:-1:exon
so has part: feature:324166-324315:-1:exon
so has part: feature:323372-323488:-1:exon
so has part: feature:322732-322826:-1:exon
so has part: feature:319907-320092:-1:exon
so has part: feature:316889-317756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335838-335970:-1:exon

position:335838:-1
position: 335838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335397-335570:-1:exon

position:335397:-1
position: 335397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335570:-1
position: 335570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334397-334578:-1:exon

position:334397:-1
position: 334397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334578:-1
position: 334578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333555-333692:-1:exon

position:333555:-1
position: 333555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333692:-1
position: 333692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:332405-332556:-1:exon

position:332405:-1
position: 332405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332556:-1
position: 332556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:331509-331620:-1:exon

position:331509:-1
position: 331509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331620:-1
position: 331620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:331255-331344:-1:exon

position:331255:-1
position: 331255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331344:-1
position: 331344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:330349-330583:-1:exon

position:330349:-1
position: 330349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330583:-1
position: 330583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:328665-328843:-1:exon

position:328665:-1
position: 328665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328843:-1
position: 328843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:327714-328110:-1:exon

position:327714:-1
position: 327714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328110:-1
position: 328110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:325935-326173:-1:exon

position:325935:-1
position: 325935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326173:-1
position: 326173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:324981-325114:-1:exon

position:324981:-1
position: 324981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325114:-1
position: 325114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:324629-324715:-1:exon

position:324629:-1
position: 324629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324715:-1
position: 324715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:324166-324315:-1:exon

position:324166:-1
position: 324166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324315:-1
position: 324315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:323372-323488:-1:exon

position:323372:-1
position: 323372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323488:-1
position: 323488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:322732-322826:-1:exon

position:322732:-1
position: 322732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322826:-1
position: 322826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:319907-320092:-1:exon

position:319907:-1
position: 319907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320092:-1
position: 320092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:316889-317756:-1:exon

position:317756:-1
position: 317756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHERP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CHERP
product: calcium homeostasis endoplasmic reticulum protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_030540069.1
SIO_010081: CHERP
subclass of: SO_0000673
so part of: CHERP
location: complement(join(316889..318184,319907..320092,322732..322826,323372..323488,324166..324315,324629..324715,324981..325114,325935..326173,327714..328110,328665..328843,330349..330583,331255..331344,331509..331620,332405..332556,333555..333692,334397..334578,335397..335570,335838..335970))
location: region:316889-335970:-1
so has part: feature:335838-335970:-1:exon
so has part: feature:335397-335570:-1:exon
so has part: feature:334397-334578:-1:exon
so has part: feature:333555-333692:-1:exon
so has part: feature:332405-332556:-1:exon
so has part: feature:331509-331620:-1:exon
so has part: feature:331255-331344:-1:exon
so has part: feature:330349-330583:-1:exon
so has part: feature:328665-328843:-1:exon
so has part: feature:327714-328110:-1:exon
so has part: feature:325935-326173:-1:exon
so has part: feature:324981-325114:-1:exon
so has part: feature:324629-324715:-1:exon
so has part: feature:324166-324315:-1:exon
so has part: feature:323372-323488:-1:exon
so has part: feature:322732-322826:-1:exon
so has part: feature:319907-320092:-1:exon
so has part: feature:316889-318184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335838-335970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335397-335570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334397-334578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333555-333692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332405-332556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331509-331620:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331255-331344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330349-330583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328665-328843:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327714-328110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:325935-326173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:324981-325114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324629-324715:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:324166-324315:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:323372-323488:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322732-322826:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:319907-320092:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:316889-318184:-1:exon

position:318184:-1
position: 318184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHERP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CHERP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium homeostasis endoplasmic reticulum protein isoform X3
translation: MEMPLPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKENPKFSFLFGGEFYGYYKYKLALEQQQLLCKQTQDIEATAQIQPLSQPSLPPAAAIPAPQGAPSVEELIQQSQWNLQQQEQHLLAMRQEQVTSAVALAVEQQMQKVLEETQLDMNEFDNLLQPIIDTCTKDAISAGKNWMFSNAKSPQHCELMAGHLRNRITAEGAHFELRLHLIYLINDVLHHCQRKQARDLLAALQKVVVPIYCTSFLAVEEDKQQKIARLLQLWEKNGYFDESIIQQLQSPALGLGQYQATLITEYASVVQPVQVAFQQQIQNLKTQHEEFVNSLTQQPQQQQQIQIPPLESEVKSTPPAPAPTPAAAPPAAPVSQADDGKSQLPLAGSAEYDATGAGVQDPAAAGPHGPGPHDQIPPNKPPWFDQPHPVAPWGQQQGPPHCPPWNNNHEGMWNEQRDSGWNNQRETPWNNQPDPSWNNQYEAPWNNQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPQEIGPPHHHPGHRLPHPGIGEHPPWGGPQHPDFGPPPHGFNGQPPHMRRQGPPHVNHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSRSYSRSQSRSRSRSHSSRSRSRSRSRSRSKSYSPGRRHRSRSRSPTPPSAAGLGSNSGPPIPDSRLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDIRDKWDQYKGVGVALDDPYENYRRNKSYSFIARMKARDDC
SIO_010081: CHERP
subclass of: SO_0000673
so part of: CHERP
location: complement(join(317752..317756,319907..320092,322732..322826,323372..323488,324166..324315,324629..324715,324981..325114,325935..326173,327714..328110,328665..328843,330349..330583,331255..331344,331509..331620,332405..332556,333555..333692,334397..334578,335397..335570,335838..335862))
location: region:317752-335862:-1
so has part: feature:335838-335862:-1:exon
so has part: feature:335397-335570:-1:exon
so has part: feature:334397-334578:-1:exon
so has part: feature:333555-333692:-1:exon
so has part: feature:332405-332556:-1:exon
so has part: feature:331509-331620:-1:exon
so has part: feature:331255-331344:-1:exon
so has part: feature:330349-330583:-1:exon
so has part: feature:328665-328843:-1:exon
so has part: feature:327714-328110:-1:exon
so has part: feature:325935-326173:-1:exon
so has part: feature:324981-325114:-1:exon
so has part: feature:324629-324715:-1:exon
so has part: feature:324166-324315:-1:exon
so has part: feature:323372-323488:-1:exon
so has part: feature:322732-322826:-1:exon
so has part: feature:319907-320092:-1:exon
so has part: feature:317752-317756:-1:exon

XP_030395931.1
type: Protein
SIO_000068: ncbiprotein

position:317752:-1
position: 317752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335862:-1
position: 335862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335838-335862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335397-335570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334397-334578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333555-333692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332405-332556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331509-331620:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331255-331344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330349-330583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328665-328843:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327714-328110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:325935-326173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:324981-325114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324629-324715:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:324166-324315:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:323372-323488:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322732-322826:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:319907-320092:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317752-317756:-1:exon

CHERP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CHERP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium homeostasis endoplasmic reticulum protein isoform X1
translation: MEMPLPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKENPKFSFLFGGEFYGYYKYKLALEQQQLLCKQTQDIEATAQIQPLSQPSLPPAAAIPAPQGAPSVEELIQQSQWNLQQQEQHLLAMRQEQVTSAVALAVEQQMQKVLEETQLDMNEFDNLLQPIIDTCTKDAISAGKNWMFSNAKSPQHCELMAGHLRNRITAEGAHFELRLHLIYLINDVLHHCQRKQARDLLAALQKVVVPIYCTSFLAVEEDKQQKIARLLQLWEKNGYFDESIIQQLQSPALGLGQYQATLITEYASVVQPVQVAFQQQIQNLKTQHEEFVNSLTQQPQQQQQIQIPPLESEVKSTPPAPAPTPAAAPPAAPVSQADDGKSQLPLAGSAEYDATGAGVQDPAAAGPHGPGPHDQIPPNKPPWFDQPHPVAPWGQQQGPPHCPPWNNNHEGMWNEQRDSGWNNQRETPWNNQPDPSWNNQYEAPWNNQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPQEIGPPHHHPGHRLPHPGIGEHPPWGGPQHPDFGPPPHGFNGQPPHMRRQGPPHVNHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSRSYSRSQSRSRSRSHSSRSRSRSRSRSRSKSYSPGRRHRSRSRSPTPPSAAGLGSNSGPPIPDSRLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDIRDKWDQYKGVGVALDDPYENYRRNKSYSFIARMKARDDLKRETQDPPPPE
SIO_010081: CHERP
subclass of: SO_0000673
so part of: CHERP
location: complement(join(318147..318184,319907..320092,322732..322826,323372..323488,324166..324315,324629..324715,324981..325114,325935..326173,327714..328110,328665..328843,330349..330583,331255..331344,331509..331620,332405..332556,333555..333692,334397..334578,335397..335570,335838..335862))
location: region:318147-335862:-1
so has part: feature:335838-335862:-1:exon
so has part: feature:335397-335570:-1:exon
so has part: feature:334397-334578:-1:exon
so has part: feature:333555-333692:-1:exon
so has part: feature:332405-332556:-1:exon
so has part: feature:331509-331620:-1:exon
so has part: feature:331255-331344:-1:exon
so has part: feature:330349-330583:-1:exon
so has part: feature:328665-328843:-1:exon
so has part: feature:327714-328110:-1:exon
so has part: feature:325935-326173:-1:exon
so has part: feature:324981-325114:-1:exon
so has part: feature:324629-324715:-1:exon
so has part: feature:324166-324315:-1:exon
so has part: feature:323372-323488:-1:exon
so has part: feature:322732-322826:-1:exon
so has part: feature:319907-320092:-1:exon
so has part: feature:318147-318184:-1:exon

XP_030395929.1
type: Protein
SIO_000068: ncbiprotein

position:318147:-1
position: 318147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335838-335862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335397-335570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334397-334578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333555-333692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332405-332556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331509-331620:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331255-331344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330349-330583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328665-328843:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327714-328110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:325935-326173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:324981-325114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324629-324715:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:324166-324315:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:323372-323488:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322732-322826:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:319907-320092:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:318147-318184:-1:exon

CHERP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CHERP
product: calcium homeostasis endoplasmic reticulum protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_030540070.1
SIO_010081: CHERP
subclass of: SO_0000673
so part of: CHERP
location: complement(join(319899..320092,322732..322826,323372..323488,324166..324315,324629..324715,324981..325114,325935..326173,327714..328110,328665..328843,330349..330583,331255..331344,331509..331620,332405..332556,333555..333692,334397..334578,335397..335570,335838..335970))
location: region:319899-335970:-1
so has part: feature:335838-335970:-1:exon
so has part: feature:335397-335570:-1:exon
so has part: feature:334397-334578:-1:exon
so has part: feature:333555-333692:-1:exon
so has part: feature:332405-332556:-1:exon
so has part: feature:331509-331620:-1:exon
so has part: feature:331255-331344:-1:exon
so has part: feature:330349-330583:-1:exon
so has part: feature:328665-328843:-1:exon
so has part: feature:327714-328110:-1:exon
so has part: feature:325935-326173:-1:exon
so has part: feature:324981-325114:-1:exon
so has part: feature:324629-324715:-1:exon
so has part: feature:324166-324315:-1:exon
so has part: feature:323372-323488:-1:exon
so has part: feature:322732-322826:-1:exon
so has part: feature:319899-320092:-1:exon

position:319899:-1
position: 319899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335838-335970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335397-335570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334397-334578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333555-333692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332405-332556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331509-331620:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331255-331344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330349-330583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328665-328843:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327714-328110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:325935-326173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:324981-325114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324629-324715:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:324166-324315:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:323372-323488:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322732-322826:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:319899-320092:-1:exon

CHERP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CHERP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium homeostasis endoplasmic reticulum protein isoform X2
translation: MEMPLPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKENPKFSFLFGGEFYGYYKYKLALEQQQLLCKQTQDIEATAQIQPLSQPSLPPAAAIPAPQGAPSVEELIQQSQWNLQQQEQHLLAMRQEQVTSAVALAVEQQMQKVLEETQLDMNEFDNLLQPIIDTCTKDAISAGKNWMFSNAKSPQHCELMAGHLRNRITAEGAHFELRLHLIYLINDVLHHCQRKQARDLLAALQKVVVPIYCTSFLAVEEDKQQKIARLLQLWEKNGYFDESIIQQLQSPALGLGQYQATLITEYASVVQPVQVAFQQQIQNLKTQHEEFVNSLTQQPQQQQQIQIPPLESEVKSTPPAPAPTPAAAPPAAPVSQADDGKSQLPLAGSAEYDATGAGVQDPAAAGPHGPGPHDQIPPNKPPWFDQPHPVAPWGQQQGPPHCPPWNNNHEGMWNEQRDSGWNNQRETPWNNQPDPSWNNQYEAPWNNQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPQEIGPPHHHPGHRLPHPGIGEHPPWGGPQHPDFGPPPHGFNGQPPHMRRQGPPHVNHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSRSYSRSQSRSRSRSHSSRSRSRSRSRSRSKSYSPGRRHRSRSRSPTPPSAAGLGSNSGPPIPDSRLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDIRDKWDQYKGVGVALDDPYENYRRNKSYSFIARMKARDDCK
SIO_010081: CHERP
subclass of: SO_0000673
so part of: CHERP
location: complement(join(319899..320092,322732..322826,323372..323488,324166..324315,324629..324715,324981..325114,325935..326173,327714..328110,328665..328843,330349..330583,331255..331344,331509..331620,332405..332556,333555..333692,334397..334578,335397..335570,335838..335862))
location: region:319899-335862:-1
so has part: feature:335838-335862:-1:exon
so has part: feature:335397-335570:-1:exon
so has part: feature:334397-334578:-1:exon
so has part: feature:333555-333692:-1:exon
so has part: feature:332405-332556:-1:exon
so has part: feature:331509-331620:-1:exon
so has part: feature:331255-331344:-1:exon
so has part: feature:330349-330583:-1:exon
so has part: feature:328665-328843:-1:exon
so has part: feature:327714-328110:-1:exon
so has part: feature:325935-326173:-1:exon
so has part: feature:324981-325114:-1:exon
so has part: feature:324629-324715:-1:exon
so has part: feature:324166-324315:-1:exon
so has part: feature:323372-323488:-1:exon
so has part: feature:322732-322826:-1:exon
so has part: feature:319899-320092:-1:exon

XP_030395930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335838-335862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335397-335570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334397-334578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333555-333692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332405-332556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331509-331620:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331255-331344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330349-330583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328665-328843:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327714-328110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:325935-326173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:324981-325114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324629-324715:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:324166-324315:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:323372-323488:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322732-322826:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:319899-320092:-1:exon

SLC35E1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: SLC35E1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(343527..351556)
location: region:343527-351556:-1
so has part: feature:343527-351556:-1:exon
subclass of: SO_0000010

115638482
type: Gene
SIO_000068: ncbigene

position:343527:-1
position: 343527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351556:-1
position: 351556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343527-351556:-1:exon

SLC35E1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: SLC35E1
product: solute carrier family 35 member E1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030540075.1
SIO_010081: SLC35E1
subclass of: SO_0000673
so part of: SLC35E1
location: complement(join(343527..346372,347509..347754,348795..348920,349906..350043,350438..350508,351169..351556))
location: region:343527-351556:-1
so has part: feature:351169-351556:-1:exon
so has part: feature:350438-350508:-1:exon
so has part: feature:349906-350043:-1:exon
so has part: feature:348795-348920:-1:exon
so has part: feature:347509-347754:-1:exon
so has part: feature:343527-346372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351169-351556:-1:exon

position:351169:-1
position: 351169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:350438-350508:-1:exon

position:350438:-1
position: 350438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350508:-1
position: 350508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:349906-350043:-1:exon

position:349906:-1
position: 349906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350043:-1
position: 350043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:348795-348920:-1:exon

position:348795:-1
position: 348795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348920:-1
position: 348920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:347509-347754:-1:exon

position:347509:-1
position: 347509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347754:-1
position: 347754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:343527-346372:-1:exon

position:346372:-1
position: 346372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC35E1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: SLC35E1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 35 member E1
translation: MAAALAAPGGGSPGSATAGAARGPALREGARVSALCLAWYGLSAGGNVVNKLLLGGFPRPVTVSLFHILGLCGLLPPLLRAWRVPPAGPAQLPPRAYPRYILPLAFGKYFASVSAHVSLWRVPVSYAHTVKATMPIWVVLLSRIIMKEKQTTKVYLSLIPIISGVLLATVTELSFDMWGLISALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSYFLVENDLSTVSHWSWTLMLLIISGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMLTAILGVFLYNKTKYDANQEAKKQLLPVTTGDLLNLEHHRNTPEKSQNGLMAFAQHGDYQYGRASVLTDHFQYNRQSYPTTYNLNRYDI
SIO_010081: SLC35E1
subclass of: SO_0000673
so part of: SLC35E1
location: complement(join(346139..346372,347509..347754,348795..348920,349906..350043,350438..350508,351169..351556))
location: region:346139-351556:-1
so has part: feature:351169-351556:-1:exon
so has part: feature:350438-350508:-1:exon
so has part: feature:349906-350043:-1:exon
so has part: feature:348795-348920:-1:exon
so has part: feature:347509-347754:-1:exon
so has part: feature:346139-346372:-1:exon

XP_030395935.1
type: Protein
SIO_000068: ncbiprotein

position:346139:-1
position: 346139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351169-351556:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350438-350508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349906-350043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348795-348920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:347509-347754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346139-346372:-1:exon

MED26
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: MED26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(353334..397716)
location: region:353334-397716:-1
so has part: feature:353334-397716:-1:exon
subclass of: SO_0000010

115638481
type: Gene
SIO_000068: ncbigene

position:353334:-1
position: 353334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397716:-1
position: 397716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353334-397716:-1:exon

MED26
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1825980
gene: MED26
product: mediator complex subunit 26, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_003997449.1
SIO_010081: MED26
so part of: MED26
location: complement(join(353334..353456,357478..359283,360693..360767,397604..397716))
location: region:353334-397716:-1
so has part: feature:397604-397716:-1:exon
so has part: feature:360693-360767:-1:exon
so has part: feature:357478-359283:-1:exon
so has part: feature:353334-353456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397604-397716:-1:exon

position:397604:-1
position: 397604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360693-360767:-1:exon

position:360693:-1
position: 360693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360767:-1
position: 360767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:357478-359283:-1:exon

position:357478:-1
position: 357478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359283:-1
position: 359283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:353334-353456:-1:exon

position:353456:-1
position: 353456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED26
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1825980
gene: MED26
product: mediator complex subunit 26, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_003997448.1
SIO_010081: MED26
so part of: MED26
location: complement(join(353334..353456,357261..359283,360693..360767,397604..397716))
location: region:353334-397716:-1
so has part: feature:397604-397716:-1:exon
so has part: feature:360693-360767:-1:exon
so has part: feature:357261-359283:-1:exon
so has part: feature:353334-353456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397604-397716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360693-360767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357261-359283:-1:exon

position:357261:-1
position: 357261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:353334-353456:-1:exon

MED26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: MED26
product: mediator complex subunit 26, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_030540074.1
SIO_010081: MED26
subclass of: SO_0000673
so part of: MED26
location: complement(join(355970..359283,360693..360767,397604..397716))
location: region:355970-397716:-1
so has part: feature:397604-397716:-1:exon
so has part: feature:360693-360767:-1:exon
so has part: feature:355970-359283:-1:exon

position:355970:-1
position: 355970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397604-397716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360693-360767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355970-359283:-1:exon

MED26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: MED26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 26
translation: MTAAPAPSPQQIRDRLLQAIDPQSNIHNMVAVLEVISSLEKYPITKEALEETRLGKLINDVRKKTSNEELAKRAKKLLRNWQKLIEPVTQNESISRGLPNPPGSANGGAHNCKPEVPPAVVTGSKPISELKSRNDIQKLNSPKTEKLGNRKRKGEHKDGHQGPPSSKVSKGSHEALQNSSPPPTNGIAGSPGSFPSPVDVNLQTGPESSRTEHSENDKHSKIPVNAVKPHTSSPGLVKPSSTSSLLKTAVLQQHDKLEETTGQHPPKSPRCSSFNPGNIRHDTFARQHITHSPKGSIPSPSQRSQFLDTAQVPSPPPPSLMQSSTPPMPAKRLEVSQQSGTEVSQHWQEQASSESQYRHTAGALQHTSPSCKTNLHPEESLMPHVGFSPDTSKMDSDDAASGSDSKKKKRYRPRDHTVNLDGQVVEGGVKPVRLKERKLTFDPMTGQIKPLTQKDSLQAEIPAVTEQHRTETDKQEQKPNLQSPFEQTNWKELSRNEIIQSYLNRQSSLLSSSGVQTPGAHYFMSEYLKQEESTRREARKTHVLAPNSKPTDLPGVTREVTSDDLNRIREHHWPGVNGCYDTQGNWYNWTQCISLDPHGDDGRLNILPYVCLD
SIO_010081: MED26
subclass of: SO_0000673
so part of: MED26
location: complement(join(357592..359283,360693..360767,397604..397678))
location: region:357592-397678:-1
so has part: feature:397604-397678:-1:exon
so has part: feature:360693-360767:-1:exon
so has part: feature:357592-359283:-1:exon

XP_030395934.1
type: Protein
SIO_000068: ncbiprotein

position:357592:-1
position: 357592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397678:-1
position: 397678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397604-397678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360693-360767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357592-359283:-1:exon

SMIM7
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: SMIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(402576..406346)
location: region:402576-406346:-1
so has part: feature:402576-406346:-1:exon
subclass of: SO_0000010

115638493
type: Gene
SIO_000068: ncbigene

position:402576:-1
position: 402576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406346:-1
position: 406346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402576-406346:-1:exon

SMIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: SMIM7
product: small integral membrane protein 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_030540093.1
SIO_010081: SMIM7
subclass of: SO_0000673
so part of: SMIM7
location: complement(join(402576..404221,404866..404956,405729..405781,406140..406181,406267..406346))
location: region:402576-406346:-1
so has part: feature:406267-406346:-1:exon
so has part: feature:406140-406181:-1:exon
so has part: feature:405729-405781:-1:exon
so has part: feature:404866-404956:-1:exon
so has part: feature:402576-404221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406267-406346:-1:exon

position:406267:-1
position: 406267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406140-406181:-1:exon

position:406140:-1
position: 406140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406181:-1
position: 406181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405729-405781:-1:exon

position:405729:-1
position: 405729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405781:-1
position: 405781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:404866-404956:-1:exon

position:404866:-1
position: 404866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404956:-1
position: 404956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:402576-404221:-1:exon

position:404221:-1
position: 404221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: SMIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 7
translation: MIGDLLLCGTLLMNAGAVLNFRLKKKDTQGFGEESREPTTGDNIREFLLSLRYFRIFIALWNIFMMFCMIVLFGS
SIO_010081: SMIM7
subclass of: SO_0000673
so part of: SMIM7
location: complement(join(404206..404221,404866..404956,405729..405781,406140..406181,406267..406292))
location: region:404206-406292:-1
so has part: feature:406267-406292:-1:exon
so has part: feature:406140-406181:-1:exon
so has part: feature:405729-405781:-1:exon
so has part: feature:404866-404956:-1:exon
so has part: feature:404206-404221:-1:exon

XP_030395953.1
type: Protein
SIO_000068: ncbiprotein

position:404206:-1
position: 404206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406292:-1
position: 406292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406267-406292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406140-406181:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405729-405781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404866-404956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404206-404221:-1:exon

TMEM38A
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: TMEM38A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 418906..438026
location: region:418906-438026:1
so has part: feature:418906-438026:1:exon
subclass of: SO_0000010

115638485
type: Gene
SIO_000068: ncbigene

position:418906:1
position: 418906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438026:1
position: 438026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418906-438026:1:exon

TMEM38A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TMEM38A
product: transmembrane protein 38A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030540078.1
SIO_010081: TMEM38A
subclass of: SO_0000673
so part of: TMEM38A
location: join(418906..419127,433698..433854,434417..434601,435287..435374,435490..435607,436929..438026)
location: region:418906-438026:1
so has part: feature:418906-419127:1:exon
so has part: feature:433698-433854:1:exon
so has part: feature:434417-434601:1:exon
so has part: feature:435287-435374:1:exon
so has part: feature:435490-435607:1:exon
so has part: feature:436929-438026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418906-419127:1:exon

position:419127:1
position: 419127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433698-433854:1:exon

position:433698:1
position: 433698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433854:1
position: 433854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:434417-434601:1:exon

position:434417:1
position: 434417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434601:1
position: 434601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:435287-435374:1:exon

position:435287:1
position: 435287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435374:1
position: 435374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:435490-435607:1:exon

position:435490:1
position: 435490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435607:1
position: 435607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:436929-438026:1:exon

position:436929:1
position: 436929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM38A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TMEM38A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trimeric intracellular cation channel type A isoform X1
translation: MELAGALQLGELAAAFARVPVFPLFDLGYFIASILYLKYQPGAVEMSHQSPVASWLCAMLHCFGSYILADMLLGEAPIDYFSNNSSVLLATAVWYLIFFCPMNLFYKCVSFLPVKLIFVAMKEVVRVRKIAVGIHHAHHHYHHGWFIMVVTGWVKGSGITLVSNFEQLLRGVWKPETNEIIHMTFPTKASLYGAILFTLQQTHWLPISKANLIFFFTMFMIVCKVFMAATHSHTSPFSPIEGFMCPVLFGSVSSGHNSHHDHHEDSHDTSPPAKSKEELNEGTRKRKAKKAE
SIO_010081: TMEM38A
subclass of: SO_0000673
so part of: TMEM38A
location: join(419004..419127,433698..433854,434417..434601,435287..435374,435490..435607,436929..437135)
location: region:419004-437135:1
so has part: feature:419004-419127:1:exon
so has part: feature:433698-433854:1:exon
so has part: feature:434417-434601:1:exon
so has part: feature:435287-435374:1:exon
so has part: feature:435490-435607:1:exon
so has part: feature:436929-437135:1:exon

XP_030395938.1
type: Protein
SIO_000068: ncbiprotein

position:419004:1
position: 419004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437135:1
position: 437135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419004-419127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433698-433854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434417-434601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435287-435374:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:435490-435607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436929-437135:1:exon

LOC115638496
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(423313..488985)
location: region:423313-488985:-1
so has part: feature:423313-488985:-1:exon
subclass of: SO_0000011

115638496
type: Gene
SIO_000068: ncbigene

position:423313:-1
position: 423313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488985:-1
position: 488985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423313-488985:-1:exon

LOC115638496
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638496
product: uncharacterized LOC115638496, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003997467.1
SIO_010081: LOC115638496
subclass of: SO_0000673
so part of: LOC115638496
location: complement(join(423313..423450,464697..464819,472667..472978,481166..481292,488918..488985))
location: region:423313-488985:-1
so has part: feature:488918-488985:-1:exon
so has part: feature:481166-481292:-1:exon
so has part: feature:472667-472978:-1:exon
so has part: feature:464697-464819:-1:exon
so has part: feature:423313-423450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:488918-488985:-1:exon

position:488918:-1
position: 488918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:481166-481292:-1:exon

position:481166:-1
position: 481166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481292:-1
position: 481292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:472667-472978:-1:exon

position:472667:-1
position: 472667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472978:-1
position: 472978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464697-464819:-1:exon

position:464697:-1
position: 464697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464819:-1
position: 464819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:423313-423450:-1:exon

position:423450:-1
position: 423450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM38A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TMEM38A
product: transmembrane protein 38A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540080.1
SIO_010081: TMEM38A
subclass of: SO_0000673
so part of: TMEM38A
location: join(426134..426221,433698..433854,434417..434601,435287..435374,435490..435607,436929..438026)
location: region:426134-438026:1
so has part: feature:426134-426221:1:exon
so has part: feature:433698-433854:1:exon
so has part: feature:434417-434601:1:exon
so has part: feature:435287-435374:1:exon
so has part: feature:435490-435607:1:exon
so has part: feature:436929-438026:1:exon

position:426134:1
position: 426134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426134-426221:1:exon

position:426221:1
position: 426221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433698-433854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434417-434601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435287-435374:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:435490-435607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436929-438026:1:exon

TMEM38A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TMEM38A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trimeric intracellular cation channel type A isoform X2
translation: MSHQSPVASWLCAMLHCFGSYILADMLLGEAPIDYFSNNSSVLLATAVWYLIFFCPMNLFYKCVSFLPVKLIFVAMKEVVRVRKIAVGIHHAHHHYHHGWFIMVVTGWVKGSGITLVSNFEQLLRGVWKPETNEIIHMTFPTKASLYGAILFTLQQTHWLPISKANLIFFFTMFMIVCKVFMAATHSHTSPFSPIEGFMCPVLFGSVSSGHNSHHDHHEDSHDTSPPAKSKEELNEGTRKRKAKKAE
SIO_010081: TMEM38A
subclass of: SO_0000673
so part of: TMEM38A
location: join(433709..433854,434417..434601,435287..435374,435490..435607,436929..437135)
location: region:433709-437135:1
so has part: feature:433709-433854:1:exon
so has part: feature:434417-434601:1:exon
so has part: feature:435287-435374:1:exon
so has part: feature:435490-435607:1:exon
so has part: feature:436929-437135:1:exon

XP_030395940.1
type: Protein
SIO_000068: ncbiprotein

position:433709:1
position: 433709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433709-433854:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434417-434601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435287-435374:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435490-435607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436929-437135:1:exon

LOC115638487
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638487
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 449707..459943
location: region:449707-459943:1
so has part: feature:449707-459943:1:exon
subclass of: SO_0000010

115638487
type: Gene
SIO_000068: ncbigene

position:449707:1
position: 449707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459943:1
position: 459943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449707-459943:1:exon

LOC115638487
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638487
product: tetraspanin-33-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030540083.1
SIO_010081: LOC115638487
subclass of: SO_0000673
so part of: LOC115638487
location: join(449707..449939,450609..450755,451103..451160,452061..452185,454850..454924,455447..455542,456624..456764,457834..457995,459429..459943)
location: region:449707-459943:1
so has part: feature:449707-449939:1:exon
so has part: feature:450609-450755:1:exon
so has part: feature:451103-451160:1:exon
so has part: feature:452061-452185:1:exon
so has part: feature:454850-454924:1:exon
so has part: feature:455447-455542:1:exon
so has part: feature:456624-456764:1:exon
so has part: feature:457834-457995:1:exon
so has part: feature:459429-459943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449707-449939:1:exon

position:449939:1
position: 449939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450609-450755:1:exon

position:450609:1
position: 450609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450755:1
position: 450755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:451103-451160:1:exon

position:451103:1
position: 451103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451160:1
position: 451160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:452061-452185:1:exon

position:452061:1
position: 452061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452185:1
position: 452185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:454850-454924:1:exon

position:454850:1
position: 454850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454924:1
position: 454924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:455447-455542:1:exon

position:455447:1
position: 455447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455542:1
position: 455542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:456624-456764:1:exon

position:456624:1
position: 456624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456764:1
position: 456764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:457834-457995:1:exon

position:457834:1
position: 457834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457995:1
position: 457995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:459429-459943:1:exon

position:459429:1
position: 459429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115638487
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638487
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-33-like
translation: MRTNQLIKYTLFVSCYLFWVASGLMVAVGIYAKLSKEASAVDSLLADPSLILLTVGILMFGITFVGCTGALRDLPVLLKIFAWILLIILILQIVAAVLGFLFSSMVLEKAAFLMGKAISGYRDDLDLQNLIDYIQKKFECCGVHSYKDWSQNIYFECQDSNPSLERCAVPFSCCIQKDQEAAITSVLNSMCGYGTQNLRSWKADSLIYIEGCLEKIVGWGQRNLLLVAGLAIGLFFLEILVFSMAVMLIYQIDFIIQKRKSTRRRGPEK
SIO_010081: LOC115638487
subclass of: SO_0000673
so part of: LOC115638487
location: join(450699..450755,451103..451160,452061..452185,454850..454924,455447..455542,456624..456764,457834..457995,459429..459524)
location: region:450699-459524:1
so has part: feature:450699-450755:1:exon
so has part: feature:451103-451160:1:exon
so has part: feature:452061-452185:1:exon
so has part: feature:454850-454924:1:exon
so has part: feature:455447-455542:1:exon
so has part: feature:456624-456764:1:exon
so has part: feature:457834-457995:1:exon
so has part: feature:459429-459524:1:exon

XP_030395943.1
type: Protein
SIO_000068: ncbiprotein

position:450699:1
position: 450699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459524:1
position: 459524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450699-450755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451103-451160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452061-452185:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454850-454924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455447-455542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456624-456764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457834-457995:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459429-459524:1:exon

LOC115638496
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638496
product: uncharacterized LOC115638496, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003997469.1
SIO_010081: LOC115638496
subclass of: SO_0000673
so part of: LOC115638496
location: complement(join(456505..456730,464697..464819,472667..472978,481166..481292,488918..488985))
location: region:456505-488985:-1
so has part: feature:488918-488985:-1:exon
so has part: feature:481166-481292:-1:exon
so has part: feature:472667-472978:-1:exon
so has part: feature:464697-464819:-1:exon
so has part: feature:456505-456730:-1:exon

position:456505:-1
position: 456505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488918-488985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:481166-481292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472667-472978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464697-464819:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456505-456730:-1:exon

position:456730:-1
position: 456730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NWD1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: NWD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 463429..487136
location: region:463429-487136:1
so has part: feature:463429-487136:1:exon
subclass of: SO_0000010

115638474
type: Gene
SIO_000068: ncbigene

position:463429:1
position: 463429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487136:1
position: 487136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463429-487136:1:exon

NWD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: NWD1
product: NACHT and WD repeat domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030540058.1
SIO_010081: NWD1
subclass of: SO_0000673
so part of: NWD1
location: join(463429..463568,466933..467018,467718..467834,469338..469508,469560..469686,469966..471244,471757..471960,472151..472310,472708..472825,473338..473502,474076..474270,476763..476885,478266..478465,480080..480352,481181..481271,481790..481944,482755..483031,483348..483904,485033..485141,486378..487136)
location: region:463429-487136:1
so has part: feature:463429-463568:1:exon
so has part: feature:466933-467018:1:exon
so has part: feature:467718-467834:1:exon
so has part: feature:469338-469508:1:exon
so has part: feature:469560-469686:1:exon
so has part: feature:469966-471244:1:exon
so has part: feature:471757-471960:1:exon
so has part: feature:472151-472310:1:exon
so has part: feature:472708-472825:1:exon
so has part: feature:473338-473502:1:exon
so has part: feature:474076-474270:1:exon
so has part: feature:476763-476885:1:exon
so has part: feature:478266-478465:1:exon
so has part: feature:480080-480352:1:exon
so has part: feature:481181-481271:1:exon
so has part: feature:481790-481944:1:exon
so has part: feature:482755-483031:1:exon
so has part: feature:483348-483904:1:exon
so has part: feature:485033-485141:1:exon
so has part: feature:486378-487136:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463429-463568:1:exon

position:463568:1
position: 463568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466933-467018:1:exon

position:466933:1
position: 466933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467018:1
position: 467018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:467718-467834:1:exon

position:467718:1
position: 467718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467834:1
position: 467834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:469338-469508:1:exon

position:469338:1
position: 469338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469508:1
position: 469508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:469560-469686:1:exon

position:469560:1
position: 469560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469686:1
position: 469686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:469966-471244:1:exon

position:469966:1
position: 469966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471244:1
position: 471244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:471757-471960:1:exon

position:471757:1
position: 471757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471960:1
position: 471960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:472151-472310:1:exon

position:472151:1
position: 472151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472310:1
position: 472310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:472708-472825:1:exon

position:472708:1
position: 472708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472825:1
position: 472825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:473338-473502:1:exon

position:473338:1
position: 473338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473502:1
position: 473502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:474076-474270:1:exon

position:474076:1
position: 474076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474270:1
position: 474270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:476763-476885:1:exon

position:476763:1
position: 476763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476885:1
position: 476885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:478266-478465:1:exon

position:478266:1
position: 478266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478465:1
position: 478465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:480080-480352:1:exon

position:480080:1
position: 480080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480352:1
position: 480352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:481181-481271:1:exon

position:481181:1
position: 481181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481271:1
position: 481271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:481790-481944:1:exon

position:481790:1
position: 481790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481944:1
position: 481944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:482755-483031:1:exon

position:482755:1
position: 482755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483031:1
position: 483031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:483348-483904:1:exon

position:483348:1
position: 483348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483904:1
position: 483904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:485033-485141:1:exon

position:485033:1
position: 485033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485141:1
position: 485141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:486378-487136:1:exon

position:486378:1
position: 486378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NWD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: NWD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT domain- and WD repeat-containing protein 1
translation: MSLSCLSLDTCRDLLQGKMVPLPFQPSSLVRIFISSAYSDMATERETLLKTAYPEVQAFCQKHSLMFEVIDLRWGVCDVIDTDHMNTQLCLEEIESCQKLSVGPTFIGLLGDCYGHRPLPRLIEEKEFETLIAQLTGDPTTTHLLTFWYWKDENAIPSVYVLQPQGDVEVWRSVERDLASALRLAAREAEKHGLISQEQRHRYDKSETEWEIEQGLLSTQEIDSAASIFLREVEGLDKHLLEGTSMQLVDTEEDGSLDNEAQQLLQSLKAKIANYYPQHLKVHTVPWNAHPGNPRQKGHTKYLKELCEQFITATNHQVLRSLRYRGKSSEEPEGLLQELSHHMMLCLESCRLFCGRQDLLDNILQSIRQNDDHVHTPLILYGPPGCGKTALMCKLSEHVRTLLGQETVVVIRQLGTSQVSSTIHSLLSDICSQVCLAFGLPPLPVQVTQACSNLILFFHNLLLTVSHLGVQSLVLFFDSVDQLIPANGAHRLYWLPKDCPSKVHIVVSTSIAEHGILETLQEAMPEPEAYFEVGPLSREEGGKMLEVLLASVRRKLSPAQQTVLQHSFPEGGHPLLFKLAFNEARRWASYTLPSALMIVTTAQEAMHSLCVRLEKLHSTVLVAHMLGYIASSRNGLSDAELKDILSLDDEVLSEIYQHCSPPCKTILRFPPLLWARLRRDIGECLVERQADGFALLGLAHRQFTEVVQSRYLPAQEKNKRHLLLADFFRGTWSWGMKKSLKLPLLGKSLNADRKVAPQPLWFSDTVANRRKLSELPFHLLNAGRIEELKQDVLGNMNWITCKIVATGIQGIVNDFAMCNERINCPELRLIQETLLLLKPALDYIDGVVVSIIYIEMLARLHFFMFSYPDLIGKLCQQCLSWLNVCPHPVLVPLCGFLQPPGGPLKMTITGFLKGVTVLELSSDHRLLVAGSQDGTMIVWIMEEIEVMHTLTGHSAEVRCVKVFGKGTSAVSAAMDYTLRIWNLVSGRQKFSIQDSHVGEQHLYQLHVDERNRIVYSASGAKVNAWHLETAEHIFQISGEAPNAWLCTEVFESRQVVMTMSEGGTLSLWDSSTGELQSKRQLSGLQEEAPTCSILIQKQGKMIVGFSRGSLSMIFSDGNSLMKKLPGRVRFLVVSEDESLLAAGFGVYVRVFLANSKGFQRFMAADLEHECVVHSAAFSPDNSIIVTGSQGESIQVWSLSEQGLLTDTLDGMGTPVTLLALCGHTLVSASHSAPYLKVWDLTYDHKHKTLAPVPDRMGCTAMSHDGNYVYFPQAGERHQVIIWDSTKGAECDTLDTSAQVRCLEVAEQKQLLFTGLVSGTVLVFPLNSRQDVVCIPPPKSQKPVNHMAFNRQEEQLAIAYDDLILVLDVSPGKPCPVIDEPIYTFYTQIPAAVISSVAVLANYRVLYGMSSGDLFLYDCPHSKVFPLEMHTCIVTCLETSHGEQWALSGSEDSLQCLWDLDVCQWEHEMCYYKQTSFLKGIQCACFSKDDKYVYTGSFDHSITVWDVLSGTLLAVQFVYATANRIMPTADGFVATTRLGYIIRERFHCPQFISSQYNPLQNIKATCVVKSRKKEEANPREQHDRGKVSRNQSRTNKLSQNCVIM
SIO_010081: NWD1
subclass of: SO_0000673
so part of: NWD1
location: join(463451..463568,466933..467018,467718..467834,469338..469508,469560..469686,469966..471244,471757..471960,472151..472310,472708..472825,473338..473502,474076..474270,476763..476885,478266..478465,480080..480352,481181..481271,481790..481944,482755..483031,483348..483904,485033..485141,486378..486664)
location: region:463451-486664:1
so has part: feature:463451-463568:1:exon
so has part: feature:466933-467018:1:exon
so has part: feature:467718-467834:1:exon
so has part: feature:469338-469508:1:exon
so has part: feature:469560-469686:1:exon
so has part: feature:469966-471244:1:exon
so has part: feature:471757-471960:1:exon
so has part: feature:472151-472310:1:exon
so has part: feature:472708-472825:1:exon
so has part: feature:473338-473502:1:exon
so has part: feature:474076-474270:1:exon
so has part: feature:476763-476885:1:exon
so has part: feature:478266-478465:1:exon
so has part: feature:480080-480352:1:exon
so has part: feature:481181-481271:1:exon
so has part: feature:481790-481944:1:exon
so has part: feature:482755-483031:1:exon
so has part: feature:483348-483904:1:exon
so has part: feature:485033-485141:1:exon
so has part: feature:486378-486664:1:exon

XP_030395918.1
type: Protein
SIO_000068: ncbiprotein

position:463451:1
position: 463451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486664:1
position: 486664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463451-463568:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466933-467018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467718-467834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:469338-469508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469560-469686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:469966-471244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471757-471960:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472151-472310:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:472708-472825:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:473338-473502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:474076-474270:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:476763-476885:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:478266-478465:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:480080-480352:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:481181-481271:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:481790-481944:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:482755-483031:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:483348-483904:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:485033-485141:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:486378-486664:1:exon

LOC115638496
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638496
product: uncharacterized LOC115638496, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997465.1
SIO_010081: LOC115638496
subclass of: SO_0000673
so part of: LOC115638496
location: complement(join(463558..464819,472667..472978,481166..481292,488918..488985))
location: region:463558-488985:-1
so has part: feature:488918-488985:-1:exon
so has part: feature:481166-481292:-1:exon
so has part: feature:472667-472978:-1:exon
so has part: feature:463558-464819:-1:exon

position:463558:-1
position: 463558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488918-488985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:481166-481292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472667-472978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463558-464819:-1:exon

LOC115638496
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638496
product: uncharacterized LOC115638496, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003997468.1
SIO_010081: LOC115638496
subclass of: SO_0000673
so part of: LOC115638496
location: complement(join(463558..464819,472656..472978,481166..481292,488918..488985))
location: region:463558-488985:-1
so has part: feature:488918-488985:-1:exon
so has part: feature:481166-481292:-1:exon
so has part: feature:472656-472978:-1:exon
so has part: feature:463558-464819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:488918-488985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:481166-481292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472656-472978:-1:exon

position:472656:-1
position: 472656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:463558-464819:-1:exon

LOC115638496
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638496
product: uncharacterized LOC115638496, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003997466.1
SIO_010081: LOC115638496
subclass of: SO_0000673
so part of: LOC115638496
location: complement(join(463558..464819,472667..472978,481166..481292,488467..488911))
location: region:463558-488911:-1
so has part: feature:488467-488911:-1:exon
so has part: feature:481166-481292:-1:exon
so has part: feature:472667-472978:-1:exon
so has part: feature:463558-464819:-1:exon

position:488911:-1
position: 488911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488467-488911:-1:exon

position:488467:-1
position: 488467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:481166-481292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472667-472978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463558-464819:-1:exon

SIN3B
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: SIN3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 489206..524310
location: region:489206-524310:1
so has part: feature:489206-524310:1:exon
subclass of: SO_0000010

115638476
type: Gene
SIO_000068: ncbigene

position:489206:1
position: 489206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524310:1
position: 524310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489206-524310:1:exon

SIN3B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1825980
gene: SIN3B
product: SIN3 transcription regulator family member B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003997447.1
SIO_010081: SIN3B
so part of: SIN3B
location: join(489206..489307,492067..492173,493326..493479,498992..499255,499888..500031,501218..501340,505241..505330,505714..505832,506435..506642,508353..508469,509817..510055,511977..512160,512535..513129,513741..513910,514720..514893,516070..516162,516482..516576,517109..517313,517679..517996,524161..524310)
location: region:489206-524310:1
so has part: feature:489206-489307:1:exon
so has part: feature:492067-492173:1:exon
so has part: feature:493326-493479:1:exon
so has part: feature:498992-499255:1:exon
so has part: feature:499888-500031:1:exon
so has part: feature:501218-501340:1:exon
so has part: feature:505241-505330:1:exon
so has part: feature:505714-505832:1:exon
so has part: feature:506435-506642:1:exon
so has part: feature:508353-508469:1:exon
so has part: feature:509817-510055:1:exon
so has part: feature:511977-512160:1:exon
so has part: feature:512535-513129:1:exon
so has part: feature:513741-513910:1:exon
so has part: feature:514720-514893:1:exon
so has part: feature:516070-516162:1:exon
so has part: feature:516482-516576:1:exon
so has part: feature:517109-517313:1:exon
so has part: feature:517679-517996:1:exon
so has part: feature:524161-524310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489206-489307:1:exon

position:489307:1
position: 489307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:492067-492173:1:exon

position:492067:1
position: 492067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492173:1
position: 492173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:493326-493479:1:exon

position:493326:1
position: 493326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493479:1
position: 493479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:498992-499255:1:exon

position:498992:1
position: 498992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499255:1
position: 499255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:499888-500031:1:exon

position:499888:1
position: 499888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500031:1
position: 500031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:501218-501340:1:exon

position:501218:1
position: 501218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501340:1
position: 501340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:505241-505330:1:exon

position:505241:1
position: 505241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505330:1
position: 505330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:505714-505832:1:exon

position:505714:1
position: 505714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505832:1
position: 505832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:506435-506642:1:exon

position:506435:1
position: 506435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506642:1
position: 506642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:508353-508469:1:exon

position:508353:1
position: 508353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508469:1
position: 508469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:509817-510055:1:exon

position:509817:1
position: 509817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510055:1
position: 510055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:511977-512160:1:exon

position:511977:1
position: 511977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512160:1
position: 512160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:512535-513129:1:exon

position:512535:1
position: 512535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513129:1
position: 513129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:513741-513910:1:exon

position:513741:1
position: 513741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513910:1
position: 513910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:514720-514893:1:exon

position:514720:1
position: 514720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514893:1
position: 514893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:516070-516162:1:exon

position:516070:1
position: 516070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516162:1
position: 516162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:516482-516576:1:exon

position:516482:1
position: 516482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516576:1
position: 516576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:517109-517313:1:exon

position:517109:1
position: 517109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517313:1
position: 517313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:517679-517996:1:exon

position:517679:1
position: 517679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517996:1
position: 517996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:524161-524310:1:exon

position:524161:1
position: 524161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIN3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: SIN3B
product: SIN3 transcription regulator family member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030540063.1
SIO_010081: SIN3B
subclass of: SO_0000673
so part of: SIN3B
location: join(489206..489307,492067..492173,493326..493479,498992..499255,499888..500031,501218..501340,505241..505330,505714..505832,506435..506642,508353..508469,509817..510055,511977..512160,512535..513129,513741..513910,514720..514893,516070..516162,516482..516576,517109..517313,517679..520492)
location: region:489206-520492:1
so has part: feature:489206-489307:1:exon
so has part: feature:492067-492173:1:exon
so has part: feature:493326-493479:1:exon
so has part: feature:498992-499255:1:exon
so has part: feature:499888-500031:1:exon
so has part: feature:501218-501340:1:exon
so has part: feature:505241-505330:1:exon
so has part: feature:505714-505832:1:exon
so has part: feature:506435-506642:1:exon
so has part: feature:508353-508469:1:exon
so has part: feature:509817-510055:1:exon
so has part: feature:511977-512160:1:exon
so has part: feature:512535-513129:1:exon
so has part: feature:513741-513910:1:exon
so has part: feature:514720-514893:1:exon
so has part: feature:516070-516162:1:exon
so has part: feature:516482-516576:1:exon
so has part: feature:517109-517313:1:exon
so has part: feature:517679-520492:1:exon

position:520492:1
position: 520492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489206-489307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492067-492173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493326-493479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498992-499255:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499888-500031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:501218-501340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505241-505330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505714-505832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:506435-506642:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:508353-508469:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:509817-510055:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511977-512160:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:512535-513129:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:513741-513910:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:514720-514893:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:516070-516162:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:516482-516576:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:517109-517313:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:517679-520492:1:exon

SIN3B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1825980
gene: SIN3B
product: SIN3 transcription regulator family member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_003997446.1
SIO_010081: SIN3B
so part of: SIN3B
location: join(489206..489307,492067..492173,493326..493479,498992..499255,499888..500031,501218..501340,505241..505330,505714..505832,506435..506642,508353..508469,509817..510055,511977..512160,512535..513129,513741..513910,514720..514893,516070..516162,516482..516576,517109..517313,517679..517996,518838..518854)
location: region:489206-518854:1
so has part: feature:489206-489307:1:exon
so has part: feature:492067-492173:1:exon
so has part: feature:493326-493479:1:exon
so has part: feature:498992-499255:1:exon
so has part: feature:499888-500031:1:exon
so has part: feature:501218-501340:1:exon
so has part: feature:505241-505330:1:exon
so has part: feature:505714-505832:1:exon
so has part: feature:506435-506642:1:exon
so has part: feature:508353-508469:1:exon
so has part: feature:509817-510055:1:exon
so has part: feature:511977-512160:1:exon
so has part: feature:512535-513129:1:exon
so has part: feature:513741-513910:1:exon
so has part: feature:514720-514893:1:exon
so has part: feature:516070-516162:1:exon
so has part: feature:516482-516576:1:exon
so has part: feature:517109-517313:1:exon
so has part: feature:517679-517996:1:exon
so has part: feature:518838-518854:1:exon

position:518854:1
position: 518854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489206-489307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492067-492173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493326-493479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498992-499255:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499888-500031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:501218-501340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505241-505330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505714-505832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:506435-506642:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:508353-508469:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:509817-510055:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511977-512160:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:512535-513129:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:513741-513910:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:514720-514893:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:516070-516162:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:516482-516576:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:517109-517313:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:517679-517996:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:518838-518854:1:exon

position:518838:1
position: 518838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIN3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: SIN3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired amphipathic helix protein Sin3b
translation: MAAGGGGGGRGGSGPRWGGGRAGGGAAQEKLPVHVEDALSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIEIPKNGKLSIQSPLASQVSSEPVPSAHPGGGLLLHYCQENSHNHSDCSEDFRQQLPYKEDKSQISLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSVQKIDHEKNLEHSKKRSRPLLLRPVPSPAKKKMKLRGTKDLSVATVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSFLGVKELSFASPLSDRSGDGMSREIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMSQEDQEKFRLDDCLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSEGRSATTNEPHLIFIYEDKQILEDAASLISYYVKRQPTIQKEDQATIRQIVHHFVPELFFSQLPDHSISEESTDEDRETHQGQNLDAPELRKKHVPGPPSSPLEEKAGFCDAAVAEPHKTLDDVYSLFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKEREKLLCEGRKEKSNDPAMELRLKQPSEVELEEYYPAFLDMVRSLLDGNIDPTQYEDTLREMFTIHAYIGFTMDKLVQNIVRQLHHLVSDDICLKVVELYLSERKRGAAGGNLSSRCVRAAKETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELLDTEETQTEDPVEVQHLANYMEQYVGVEGVPNNQSDGFLLKPVFLQRNLKKFRKWQCKQVRALRSEVKSSWKRLIGVESACNMDCRFRLNTHKMMFIMNSEDYMYRRGTLSRAKQVQPMVLLKHHQQFEEWHSRWLEENVTVEAAELVQDWLMGDEDEDMVPCKTTCETVNVHGVPVNRYRVQYSRRPASP
SIO_010081: SIN3B
subclass of: SO_0000673
so part of: SIN3B
location: join(489206..489307,492067..492173,493326..493479,498992..499255,499888..500031,501218..501340,505241..505330,505714..505832,506435..506642,508353..508469,509817..510055,511977..512160,512535..513129,513741..513910,514720..514893,516070..516162,516482..516576,517109..517313,517679..517909)
location: region:489206-517909:1
so has part: feature:489206-489307:1:exon
so has part: feature:492067-492173:1:exon
so has part: feature:493326-493479:1:exon
so has part: feature:498992-499255:1:exon
so has part: feature:499888-500031:1:exon
so has part: feature:501218-501340:1:exon
so has part: feature:505241-505330:1:exon
so has part: feature:505714-505832:1:exon
so has part: feature:506435-506642:1:exon
so has part: feature:508353-508469:1:exon
so has part: feature:509817-510055:1:exon
so has part: feature:511977-512160:1:exon
so has part: feature:512535-513129:1:exon
so has part: feature:513741-513910:1:exon
so has part: feature:514720-514893:1:exon
so has part: feature:516070-516162:1:exon
so has part: feature:516482-516576:1:exon
so has part: feature:517109-517313:1:exon
so has part: feature:517679-517909:1:exon

XP_030395923.1
type: Protein
SIO_000068: ncbiprotein

position:517909:1
position: 517909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489206-489307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492067-492173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493326-493479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498992-499255:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499888-500031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:501218-501340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505241-505330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505714-505832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:506435-506642:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:508353-508469:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:509817-510055:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511977-512160:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:512535-513129:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:513741-513910:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:514720-514893:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:516070-516162:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:516482-516576:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:517109-517313:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:517679-517909:1:exon

F2RL3
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: F2RL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 530906..536043
location: region:530906-536043:1
so has part: feature:530906-536043:1:exon
subclass of: SO_0000010

115638484
type: Gene
SIO_000068: ncbigene

position:530906:1
position: 530906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536043:1
position: 536043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530906-536043:1:exon

F2RL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: F2RL3
product: F2R like thrombin or trypsin receptor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_030540077.1
SIO_010081: F2RL3
subclass of: SO_0000673
so part of: F2RL3
location: join(530906..531495,532862..536043)
location: region:530906-536043:1
so has part: feature:530906-531495:1:exon
so has part: feature:532862-536043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:530906-531495:1:exon

position:531495:1
position: 531495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:532862-536043:1:exon

position:532862:1
position: 532862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F2RL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: F2RL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteinase-activated receptor 4
translation: MEISWCAFLAYRLVLWCSLWGLCLASPDYDDYSQNSTNEQVVTSANTLCPRAIPGEKVTRGNITYLSIHEDSRSQLSSAVTVWLIPWLYTAVFLVGLPANGLALWVLATRIEKLTSTIFLMNLAAADLLLVLVLPFKISYYFLGNHWPFGEGLCRLTTAFFYGNMYCSVLLLMCISVDRYLAAVHPFFSRSFRSPGFAACTCLSVWLITAIFTLPLILLQQSYPLDKTNITLCHDVLPRHEDAEYYYYYFVCLIVCCFLVPLVVMVFSHCSVLWILLGSGERYTYAMKLTVLVLLTVVVFYTPSNILLLVHYSSNCSKLYGDLYISYMVSLALSSFNSCVDPFVYYYVSEDFRDKVRRRIFSHSKRTITSLKTSKETLPQKSSHSQSLV
SIO_010081: F2RL3
subclass of: SO_0000673
so part of: F2RL3
location: join(531405..531495,532862..533940)
location: region:531405-533940:1
so has part: feature:531405-531495:1:exon
so has part: feature:532862-533940:1:exon

XP_030395937.1
type: Protein
SIO_000068: ncbiprotein

position:531405:1
position: 531405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533940:1
position: 533940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531405-531495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532862-533940:1:exon

CPAMD8
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: CPAMD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(536406..675958)
location: region:536406-675958:-1
so has part: feature:536406-675958:-1:exon
subclass of: SO_0000010

115638472
type: Gene
SIO_000068: ncbigene

position:536406:-1
position: 536406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675958:-1
position: 675958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536406-675958:-1:exon

CPAMD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: CPAMD8
product: C3 and PZP like alpha-2-macroglobulin domain containing 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030540055.1
SIO_010081: CPAMD8
subclass of: SO_0000673
so part of: CPAMD8
location: complement(join(536406..539964,540282..540444,548028..548102,549795..550007,550808..550918,551007..551112,551955..552029,558643..558730,565327..565565,566706..566768,567163..567318,567710..567846,568881..568967,570338..570503,574041..574115,574570..574726,576250..576331,584377..584553,585195..585420,585943..586241,587032..587083,590464..590606,592374..592527,593321..593552,597752..597814,599151..599293,601294..601455,601586..601735,601847..602019,603884..604073,606620..606748,607244..607414,607596..607823,608316..608424,611482..611566,613563..613676,613829..613883,614546..614563,615179..615231,615386..615551,630330..630352,632062..632213,665250..665357,666690..666831,667120..667261,668174..668332,669388..669462,670799..670881,672108..672221,673825..673933,675259..675314,675743..675813,675914..675958))
location: region:536406-675958:-1
so has part: feature:675914-675958:-1:exon
so has part: feature:675743-675813:-1:exon
so has part: feature:675259-675314:-1:exon
so has part: feature:673825-673933:-1:exon
so has part: feature:672108-672221:-1:exon
so has part: feature:670799-670881:-1:exon
so has part: feature:669388-669462:-1:exon
so has part: feature:668174-668332:-1:exon
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CPAMD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: CPAMD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
translation: MAAVGSPAGVTPGAEGAAEPDGSAGATGARPKGGRVVKARYLQYDRKPVGKQSISANSSVVSGVKRSEKGETPTGRAGLFQKCKATTGTATSTLNRTVLGKDDLQSTLLEGHKIARPDLDLSAINDKSLLKKIPGSKSLFRAESRTRKKEQNSKSSDPDDVIGMLESQALLLNYASMKIEKNIAQLEEKGERNLSILCEEKEKQQKKLYELKRQLLLKKREQKLEEVLDKQVEVLTPLLTVCEQFKEEYKTFAAALDTTRHELPVKNIHIEGNRHTHLEDLKKHLAVTQSLLVEAAPGYLEENSKAFPVLKELKEVALKMDAELERSFKQVQDLSFEISKEVSLHNQKVCEDTHGIETLQHWGYLIAAPSVFRSGIEEAVSVTIFNSIKETTVQIQLVVKGETVARGHGAVLDKGTIKLKVPSGLRGQAHLKVWGNRHLTEEGYIFHNYTTVTIDSKGTSVFIQTDKPVYKPKQKVLINLFMVTSDLRPINEKIEAYIVDPRGSRMIEWSNLKPFCCGIVNMSFPLSDQPVFGEWFIFAEMQGHAYNKSFEVQKYVLPKFELLIDPPLYIRDLATCEKGTVHARYTFGKPVTGKLTVNMTINGVGYYRHEVGHPVLKTIEIDGSAVFDVCVRDMMPADVPEHFRGTVNIWATVTSSDGSKQVTFDDSTPVQKQLIDIKYTKDTRKQFKPGLPYKGKVEVTYPDGSPADGVTIRIKAELTPKDNVYTSELVSRSGLVEFEIPSIPTAAQYVWLETKVTAIDGKPAGDQYLPNYLSISSWYSPSKCHIQLQAPDKPFQVGEEAQIAVKSTCPCNFTLHYEVASRGNIVLSGLQPGNITQQRSKRATFPLDKNIHVTHFPGTAPTNPPATEVEVCMTFLHFMLAHSMAPLGRLLVYYVRENGEGVTDSLQFTVKSSFENQVSVALSANETRPGDVVNLKVKAAKGSCVCIATVDKSVYLLKTGFQLTSAQVFQELAEYDVSDAFGAPKEEGHFWWPGMSSRRRRRSSVFPWHWDITKDARFAFTETGLVVMTDLVSLNHRQNGGMYTDEAVPAFQPHTGTLVATMHSKIVPRTEKKKRTFFPETWIWHCLNVSDVSGEAQLHVEVPDSITTWITEAVGLSEKKGLGLAKQTELKTFKPFFIDFTLPYHVIRGEQTKIPLTVYNYLAVCIEVHVKISVPKGIKFVGHPGKHHLTRKKCVAPGKAKPTSIVLSFSELGLSNITAKAFAYGGTNCCQDGMQILKNGKQSEDIYLDKRTPVGIDYVRSSVVIEPEGLSREYTYSVFFCPNEKIHISTPNKYEYQYMQKPARMTHFDIAVKAHNDAHFALSSGPHDMAEMTEIVIGGHQNAKTWISTSKMGEPVVSTDTAGILSWDEFRSFWISWKNGIIQVGHGTQKLNESIIVEWAIPKQPEVKYIGFSTGWGSMGEFKIWRKEETDENHSEAFTLGVPHNVIPGSERATASIIGDVMGPTLNNLDNLLRLPFGCGEQNMIHFAPNVFVLKYLQKTKQLSPEVESEATDYLVQGYQRQLTYKRQDGSYSAFGERDSSGSMWLTAFVLKSFAQSRGFIFIDPKELTAAKDWIIQHQKEDGSFPAMGRILNKDIQGGINGKISLTAYVVAALLETGITFEGEKAAVAKAKHFLESNLYSAEDPYTTALTAYALTLLHSPSAAVMLRKMNSMAIMQDGFTHWSLMGTLVTDEDTFMGFNDGLSQSVVSAEVEMTAYALLTYTLLGDVASALPVVKWLSQQRNALGGFSSTQDTCLALQALAEYAILSYVGGVNLTISLASTNLDYQETFELNKMNKKVLQTAVIPSIPTGLFVSAKGEGCCLLQIDVTYNVPDPVAKPAFQLLVNLKEPKSECHQQTQHPLRPLSPDENRSEASHRDRALVDDDDPASDQDHQEYKVILETCTRWLHSGSSNMAVLEVPLFSGFRADIESLEQLLMNKQTGLKRYEVDGRKILFYFDEIPSQCMTCVKFQAFREYIVGKTAPVPIKVYDYYEPAFEATR…
SIO_010081: CPAMD8
subclass of: SO_0000673
so part of: CPAMD8
location: complement(join(539964,540282..540444,548028..548102,549795..550007,550808..550918,551007..551112,551955..552029,558643..558730,565327..565565,566706..566768,567163..567318,567710..567846,568881..568967,570338..570503,574041..574115,574570..574726,576250..576331,584377..584553,585195..585420,585943..586241,587032..587083,590464..590606,592374..592527,593321..593552,597752..597814,599151..599293,601294..601455,601586..601735,601847..602019,603884..604073,606620..606748,607244..607414,607596..607823,608316..608424,611482..611566,613563..613676,613829..613883,614546..614563,615179..615231,615386..615551,630330..630352,632062..632213,665250..665357,666690..666831,667120..667261,668174..668332,669388..669462,670799..670881,672108..672221,673825..673933,675259..675314,675743..675813,675914..675939))
location: region:539964-675939:-1
so has part: feature:675914-675939:-1:exon
so has part: feature:675743-675813:-1:exon
so has part: feature:675259-675314:-1:exon
so has part: feature:673825-673933:-1:exon
so has part: feature:672108-672221:-1:exon
so has part: feature:670799-670881:-1:exon
so has part: feature:669388-669462:-1:exon
so has part: feature:668174-668332:-1:exon
so has part: feature:667120-667261:-1:exon
so has part: feature:666690-666831:-1:exon
so has part: feature:665250-665357:-1:exon
so has part: feature:632062-632213:-1:exon
so has part: feature:630330-630352:-1:exon
so has part: feature:615386-615551:-1:exon
so has part: feature:615179-615231:-1:exon
so has part: feature:614546-614563:-1:exon
so has part: feature:613829-613883:-1:exon
so has part: feature:613563-613676:-1:exon
so has part: feature:611482-611566:-1:exon
so has part: feature:608316-608424:-1:exon
so has part: feature:607596-607823:-1:exon
so has part: feature:607244-607414:-1:exon
so has part: feature:606620-606748:-1:exon
so has part: feature:603884-604073:-1:exon
so has part: feature:601847-602019:-1:exon
so has part: feature:601586-601735:-1:exon
so has part: feature:601294-601455:-1:exon
so has part: feature:599151-599293:-1:exon
so has part: feature:597752-597814:-1:exon
so has part: feature:593321-593552:-1:exon
so has part: feature:592374-592527:-1:exon
so has part: feature:590464-590606:-1:exon
so has part: feature:587032-587083:-1:exon
so has part: feature:585943-586241:-1:exon
so has part: feature:585195-585420:-1:exon
so has part: feature:584377-584553:-1:exon
so has part: feature:576250-576331:-1:exon
so has part: feature:574570-574726:-1:exon
so has part: feature:574041-574115:-1:exon
so has part: feature:570338-570503:-1:exon
so has part: feature:568881-568967:-1:exon
so has part: feature:567710-567846:-1:exon
so has part: feature:567163-567318:-1:exon
so has part: feature:566706-566768:-1:exon
so has part: feature:565327-565565:-1:exon
so has part: feature:558643-558730:-1:exon
so has part: feature:551955-552029:-1:exon
so has part: feature:551007-551112:-1:exon
so has part: feature:550808-550918:-1:exon
so has part: feature:549795-550007:-1:exon
so has part: feature:548028-548102:-1:exon
so has part: feature:540282-540444:-1:exon
so has part: feature:539964-539964:-1:exon

XP_030395915.1
type: Protein
SIO_000068: ncbiprotein

position:675939:-1
position: 675939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675914-675939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675743-675813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675259-675314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:673825-673933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:672108-672221:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670799-670881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669388-669462:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668174-668332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:667120-667261:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:666690-666831:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665250-665357:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:632062-632213:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630330-630352:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:615386-615551:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:615179-615231:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614546-614563:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:613829-613883:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:613563-613676:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:611482-611566:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:608316-608424:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:607596-607823:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:607244-607414:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:606620-606748:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:603884-604073:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:601847-602019:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:601586-601735:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:601294-601455:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:599151-599293:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:597752-597814:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:593321-593552:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:592374-592527:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:590464-590606:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:587032-587083:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:585943-586241:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:585195-585420:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:584377-584553:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:576250-576331:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:574570-574726:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:574041-574115:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:570338-570503:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:568881-568967:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:567710-567846:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:567163-567318:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:566706-566768:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:565327-565565:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:558643-558730:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:551955-552029:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:551007-551112:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:550808-550918:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:549795-550007:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:548028-548102:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:540282-540444:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:539964-539964:-1:exon

MYO9B
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: MYO9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 679489..763698
location: region:679489-763698:1
so has part: feature:679489-763698:1:exon
subclass of: SO_0000010

115638473
type: Gene
SIO_000068: ncbigene

position:679489:1
position: 679489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763698:1
position: 763698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679489-763698:1:exon

MYO9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: MYO9B
product: myosin IXB, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030540057.1
SIO_010081: MYO9B
subclass of: SO_0000673
so part of: MYO9B
location: join(679489..679860,695400..696293,717080..717174,722032..722094,723292..723391,724074..724174,724531..724660,725179..725268,725725..725841,726191..726325,729111..729232,729842..729983,730256..730451,731065..731140,734155..734244,735461..735574,736831..736870,737547..737669,738778..738858,740521..740631,740995..741117,741856..742005,742095..742261,742761..743723,744462..744528,745030..745160,745759..745916,747300..747490,748444..748542,749019..749195,749729..749770,753015..753126,754505..754578,754854..755046,755376..755504,756112..756217,757053..757184,758004..758455)
location: region:679489-758455:1
so has part: feature:679489-679860:1:exon
so has part: feature:695400-696293:1:exon
so has part: feature:717080-717174:1:exon
so has part: feature:722032-722094:1:exon
so has part: feature:723292-723391:1:exon
so has part: feature:724074-724174:1:exon
so has part: feature:724531-724660:1:exon
so has part: feature:725179-725268:1:exon
so has part: feature:725725-725841:1:exon
so has part: feature:726191-726325:1:exon
so has part: feature:729111-729232:1:exon
so has part: feature:729842-729983:1:exon
so has part: feature:730256-730451:1:exon
so has part: feature:731065-731140:1:exon
so has part: feature:734155-734244:1:exon
so has part: feature:735461-735574:1:exon
so has part: feature:736831-736870:1:exon
so has part: feature:737547-737669:1:exon
so has part: feature:738778-738858:1:exon
so has part: feature:740521-740631:1:exon
so has part: feature:740995-741117:1:exon
so has part: feature:741856-742005:1:exon
so has part: feature:742095-742261:1:exon
so has part: feature:742761-743723:1:exon
so has part: feature:744462-744528:1:exon
so has part: feature:745030-745160:1:exon
so has part: feature:745759-745916:1:exon
so has part: feature:747300-747490:1:exon
so has part: feature:748444-748542:1:exon
so has part: feature:749019-749195:1:exon
so has part: feature:749729-749770:1:exon
so has part: feature:753015-753126:1:exon
so has part: feature:754505-754578:1:exon
so has part: feature:754854-755046:1:exon
so has part: feature:755376-755504:1:exon
so has part: feature:756112-756217:1:exon
so has part: feature:757053-757184:1:exon
so has part: feature:758004-758455:1:exon

position:758455:1
position: 758455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679489-679860:1:exon

position:679860:1
position: 679860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:695400-696293:1:exon

position:695400:1
position: 695400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696293:1
position: 696293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717080-717174:1:exon

position:717080:1
position: 717080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717174:1
position: 717174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:722032-722094:1:exon

position:722032:1
position: 722032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722094:1
position: 722094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:723292-723391:1:exon

position:723292:1
position: 723292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723391:1
position: 723391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:724074-724174:1:exon

position:724074:1
position: 724074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724174:1
position: 724174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:724531-724660:1:exon

position:724531:1
position: 724531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724660:1
position: 724660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:725179-725268:1:exon

position:725179:1
position: 725179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725268:1
position: 725268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:725725-725841:1:exon

position:725725:1
position: 725725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725841:1
position: 725841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:726191-726325:1:exon

position:726191:1
position: 726191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726325:1
position: 726325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:729111-729232:1:exon

position:729111:1
position: 729111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729232:1
position: 729232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:729842-729983:1:exon

position:729842:1
position: 729842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729983:1
position: 729983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:730256-730451:1:exon

position:730256:1
position: 730256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730451:1
position: 730451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:731065-731140:1:exon

position:731065:1
position: 731065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731140:1
position: 731140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:734155-734244:1:exon

position:734155:1
position: 734155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734244:1
position: 734244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:735461-735574:1:exon

position:735461:1
position: 735461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735574:1
position: 735574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:736831-736870:1:exon

position:736831:1
position: 736831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736870:1
position: 736870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:737547-737669:1:exon

position:737547:1
position: 737547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737669:1
position: 737669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:738778-738858:1:exon

position:738778:1
position: 738778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738858:1
position: 738858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:740521-740631:1:exon

position:740521:1
position: 740521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740631:1
position: 740631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:740995-741117:1:exon

position:740995:1
position: 740995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741117:1
position: 741117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:741856-742005:1:exon

position:741856:1
position: 741856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742005:1
position: 742005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:742095-742261:1:exon

position:742095:1
position: 742095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742261:1
position: 742261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:742761-743723:1:exon

position:742761:1
position: 742761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743723:1
position: 743723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:744462-744528:1:exon

position:744462:1
position: 744462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744528:1
position: 744528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:745030-745160:1:exon

position:745030:1
position: 745030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745160:1
position: 745160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:745759-745916:1:exon

position:745759:1
position: 745759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745916:1
position: 745916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:747300-747490:1:exon

position:747300:1
position: 747300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747490:1
position: 747490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:748444-748542:1:exon

position:748444:1
position: 748444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748542:1
position: 748542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:749019-749195:1:exon

position:749019:1
position: 749019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749195:1
position: 749195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:749729-749770:1:exon

position:749729:1
position: 749729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749770:1
position: 749770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:753015-753126:1:exon

position:753015:1
position: 753015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753126:1
position: 753126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:754505-754578:1:exon

position:754505:1
position: 754505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754578:1
position: 754578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:754854-755046:1:exon

position:754854:1
position: 754854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755046:1
position: 755046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:755376-755504:1:exon

position:755376:1
position: 755376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755504:1
position: 755504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:756112-756217:1:exon

position:756112:1
position: 756112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756217:1
position: 756217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:757053-757184:1:exon

position:757053:1
position: 757053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757184:1
position: 757184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:758004-758455:1:exon

position:758004:1
position: 758004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYO9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: MYO9B
product: myosin IXB, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030540056.1
SIO_010081: MYO9B
subclass of: SO_0000673
so part of: MYO9B
location: join(679490..679860,695400..696293,717080..717174,722032..722094,723292..723391,724074..724174,724531..724660,725179..725268,725725..725841,726191..726325,729111..729232,729842..729983,730256..730451,731065..731140,734155..734244,735461..735574,736831..736870,737547..737669,738778..738858,740521..740631,740995..741117,741856..742005,742095..742261,742761..743723,744462..744528,745030..745160,745759..745916,747300..747490,748444..748542,749019..749195,749729..749770,753015..753126,754505..754578,754854..755046,755376..755504,756112..756217,757053..757184,758486..758609,761423..761470,762034..762173,762489..762616,762768..763698)
location: region:679490-763698:1
so has part: feature:679490-679860:1:exon
so has part: feature:695400-696293:1:exon
so has part: feature:717080-717174:1:exon
so has part: feature:722032-722094:1:exon
so has part: feature:723292-723391:1:exon
so has part: feature:724074-724174:1:exon
so has part: feature:724531-724660:1:exon
so has part: feature:725179-725268:1:exon
so has part: feature:725725-725841:1:exon
so has part: feature:726191-726325:1:exon
so has part: feature:729111-729232:1:exon
so has part: feature:729842-729983:1:exon
so has part: feature:730256-730451:1:exon
so has part: feature:731065-731140:1:exon
so has part: feature:734155-734244:1:exon
so has part: feature:735461-735574:1:exon
so has part: feature:736831-736870:1:exon
so has part: feature:737547-737669:1:exon
so has part: feature:738778-738858:1:exon
so has part: feature:740521-740631:1:exon
so has part: feature:740995-741117:1:exon
so has part: feature:741856-742005:1:exon
so has part: feature:742095-742261:1:exon
so has part: feature:742761-743723:1:exon
so has part: feature:744462-744528:1:exon
so has part: feature:745030-745160:1:exon
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so has part: feature:748444-748542:1:exon
so has part: feature:749019-749195:1:exon
so has part: feature:749729-749770:1:exon
so has part: feature:753015-753126:1:exon
so has part: feature:754505-754578:1:exon
so has part: feature:754854-755046:1:exon
so has part: feature:755376-755504:1:exon
so has part: feature:756112-756217:1:exon
so has part: feature:757053-757184:1:exon
so has part: feature:758486-758609:1:exon
so has part: feature:761423-761470:1:exon
so has part: feature:762034-762173:1:exon
so has part: feature:762489-762616:1:exon
so has part: feature:762768-763698:1:exon

position:679490:1
position: 679490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679490-679860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:695400-696293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717080-717174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722032-722094:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723292-723391:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724074-724174:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724531-724660:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:725179-725268:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725725-725841:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:726191-726325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:729111-729232:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:729842-729983:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:730256-730451:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:731065-731140:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:734155-734244:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:735461-735574:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:736831-736870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:737547-737669:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:738778-738858:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:740521-740631:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:740995-741117:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:741856-742005:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:742095-742261:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:742761-743723:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:744462-744528:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:745030-745160:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:745759-745916:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:747300-747490:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:748444-748542:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:749019-749195:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:749729-749770:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:753015-753126:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:754505-754578:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:754854-755046:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:755376-755504:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:756112-756217:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:757053-757184:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:758486-758609:1:exon

position:758486:1
position: 758486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758609:1
position: 758609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:761423-761470:1:exon

position:761423:1
position: 761423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761470:1
position: 761470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:762034-762173:1:exon

position:762034:1
position: 762034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762173:1
position: 762173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:762489-762616:1:exon

position:762489:1
position: 762489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762616:1
position: 762616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:762768-763698:1:exon

position:762768:1
position: 762768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYO9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: MYO9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXb isoform X1
translation: MSLKDADSAVCQEKATYNLHIYPQLSTESTTCCRVTATKDSTTSDVIKDVIQILDLDVSKHYVLVEVKESGGEEWVLDLNDSPVHRVLLWPRRAQDEHPQNDGYYFLLQERDTDGTIKYVHMQLVSQEKDARRLVERGFLPWHQENFDDLCNLSNLTETTLLENLKRRFLKHKIYTYAGSILIAINPFKFLPIYNPKYVKMYENHQLGKLEPHIFAIADVAYHTMLKKHVNQCIVISGESGSGKTQSTNFLIHCFTALSQKGYASGVERTILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYLENGIVRGAVVEKYLLEKSRLVSQEKDERNYHVFYYLLLGVSEEERKEFHLKQPEDYFYLNQHNLKIEDGEDLRHDFERLKQAMEMVGFLPATKKQIFSVLSAILYLGNVTYKKRATGRDEGLEVGPTEVLDTLSQLLKVKREVLVEVLTKRKTVTANDKLILPYSLSEAITARDSMAKSLYSALFDWIVLRINHALLNKKDMEESVSCLSIGVLDIFGFEDFETNSFEQFCINYANEQLQYYFNQHIFKLEQEEYQSEGIAWHNIDYTDNVTCIHLISKKPTGLFYLLDEESNFPHATNQTLLAKFKQQHEENKFFVGTPVKEPAFIIRHFAGKVKYQIKDFREKNMDYMRPDIVALLRSSDSAYVRELIGMDPVAVFRWAILRAAIRAMAVFAEAGRQRAQKTAGVVRHGPRVPLGELQRANTPIEKVYRCSVLDFSFDCSEDFDINAFEDIIAFYESKKDLHDQIIKSIKGLPWQGEDPCRLLRSLSRLQQPHVHFLKSRSTKQKQIIPKNLLDSKSLKLIVSMTLHDRTTKSLLHLHKKKKPPSISAQFQNSLNKLLETLGKAEPFFIRCIRSNAEKRELFFDEGLVLQQLRYTGMLETVRIRRSGYSAKYTFQDFIDQFQVLLPQNAKASKEEIWAHLNKLKLDKNNYQIGKTKVFMKEAERQMLQDTLHKEVIRKIVLLQSWLRMVLERRHFLRMRQATITLQTCWRSYRIRRALERTNAAIYIQSVWRRYRERESYHQQRRRISLVQALVRGHLQRKRFQQMIVEKQQEMQQAQEGEDSVSQEDGNELALEQLAVKPEMQLDQGIEQMAAGVDEAQNDGDEKLSHATEKAVPSQKSITDGHEKLTSSREKRESRRQRGLEHNKLQNKHVLFPLKQQSLVCQEEETSAKETPETVQEPNKFTAYKTVLPKGTEEERIPVEENKTLSDTQVPGEILDSDVSFPKQSNESKQEILDDKIIDKLKIQDNQKNQIKGSQSFTCPERPSDFSLHIKKNLTPTRSFQTGDENYGNKNKHRISKVDKDLDSPPSFQIQRYLHDPGELRDKREKWKGKRQSEAGQNDVLSESLDERNRTGQSPQTLLSKKGTTSSLDDIANLAQSVTMIQPSPETMAEEKSNKKQTLQKKSNEQLSLLDLAVSVQLPSQPMDAKSTFKIPLRKLLGKKPDKKYVRESPDVMEEGENLPLLSCILISESVESQKLSEAPSGHPRRPQAGERPVKETSKGKRNRTIKIKKISAVSEKRPASVIREITNANELKYLDEFLLNKINDLNSQKSATECLFFEATEKFRGNIKTMYSVPNGQIHVGYKDLIENYQLLVINLAKEREEKDVKLVLNLFQSLLDEFSRGYAKREESEQHKQSKTQKKKRKQERAIEEHNGHVFTSYQVSIRQSCEQCSSYIWPMEKACLCSTCKLICHKKCMSKTQSCCTSPCGKKNEQGVDSRHFGVCVSSLISDKNSVPVVMEKLLEYVEMHGLYTEGIYRKSGSANRMRELKQLLQTDPNSVKLENYPIHTITGILKQWLRELPDPLMTFAQYSDFLRAVELPEKQEQLIAIYSVLEQLPQANHNTLERLIFHLVKVALIEDVNRMSPNALAIVFAPCLLRCPDNSDPLTSMKDVSKTTMCVEMLIKEQMRKYKIKMDEINQLEAAESIAFRRLSLLRQNTLWPVKLGFSSPYEGVLSKKPPRQGNDDSFPELG…
SIO_010081: MYO9B
subclass of: SO_0000673
so part of: MYO9B
location: join(695457..696293,717080..717174,722032..722094,723292..723391,724074..724174,724531..724660,725179..725268,725725..725841,726191..726325,729111..729232,729842..729983,730256..730451,731065..731140,734155..734244,735461..735574,736831..736870,737547..737669,738778..738858,740521..740631,740995..741117,741856..742005,742095..742261,742761..743723,744462..744528,745030..745160,745759..745916,747300..747490,748444..748542,749019..749195,749729..749770,753015..753126,754505..754578,754854..755046,755376..755504,756112..756217,757053..757184,758486..758609,761423..761470,762034..762114)
location: region:695457-762114:1
so has part: feature:695457-696293:1:exon
so has part: feature:717080-717174:1:exon
so has part: feature:722032-722094:1:exon
so has part: feature:723292-723391:1:exon
so has part: feature:724074-724174:1:exon
so has part: feature:724531-724660:1:exon
so has part: feature:725179-725268:1:exon
so has part: feature:725725-725841:1:exon
so has part: feature:726191-726325:1:exon
so has part: feature:729111-729232:1:exon
so has part: feature:729842-729983:1:exon
so has part: feature:730256-730451:1:exon
so has part: feature:731065-731140:1:exon
so has part: feature:734155-734244:1:exon
so has part: feature:735461-735574:1:exon
so has part: feature:736831-736870:1:exon
so has part: feature:737547-737669:1:exon
so has part: feature:738778-738858:1:exon
so has part: feature:740521-740631:1:exon
so has part: feature:740995-741117:1:exon
so has part: feature:741856-742005:1:exon
so has part: feature:742095-742261:1:exon
so has part: feature:742761-743723:1:exon
so has part: feature:744462-744528:1:exon
so has part: feature:745030-745160:1:exon
so has part: feature:745759-745916:1:exon
so has part: feature:747300-747490:1:exon
so has part: feature:748444-748542:1:exon
so has part: feature:749019-749195:1:exon
so has part: feature:749729-749770:1:exon
so has part: feature:753015-753126:1:exon
so has part: feature:754505-754578:1:exon
so has part: feature:754854-755046:1:exon
so has part: feature:755376-755504:1:exon
so has part: feature:756112-756217:1:exon
so has part: feature:757053-757184:1:exon
so has part: feature:758486-758609:1:exon
so has part: feature:761423-761470:1:exon
so has part: feature:762034-762114:1:exon

XP_030395916.1
type: Protein
SIO_000068: ncbiprotein

position:695457:1
position: 695457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762114:1
position: 762114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695457-696293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:717080-717174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:722032-722094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:723292-723391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:724074-724174:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724531-724660:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:725179-725268:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:725725-725841:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726191-726325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:729111-729232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:729842-729983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:730256-730451:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:731065-731140:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:734155-734244:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735461-735574:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:736831-736870:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737547-737669:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:738778-738858:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:740521-740631:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:740995-741117:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:741856-742005:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:742095-742261:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:742761-743723:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:744462-744528:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:745030-745160:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:745759-745916:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:747300-747490:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:748444-748542:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:749019-749195:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:749729-749770:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:753015-753126:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:754505-754578:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:754854-755046:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:755376-755504:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:756112-756217:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:757053-757184:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:758486-758609:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:761423-761470:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:762034-762114:1:exon

MYO9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: MYO9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXb isoform X2
translation: MSLKDADSAVCQEKATYNLHIYPQLSTESTTCCRVTATKDSTTSDVIKDVIQILDLDVSKHYVLVEVKESGGEEWVLDLNDSPVHRVLLWPRRAQDEHPQNDGYYFLLQERDTDGTIKYVHMQLVSQEKDARRLVERGFLPWHQENFDDLCNLSNLTETTLLENLKRRFLKHKIYTYAGSILIAINPFKFLPIYNPKYVKMYENHQLGKLEPHIFAIADVAYHTMLKKHVNQCIVISGESGSGKTQSTNFLIHCFTALSQKGYASGVERTILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYLENGIVRGAVVEKYLLEKSRLVSQEKDERNYHVFYYLLLGVSEEERKEFHLKQPEDYFYLNQHNLKIEDGEDLRHDFERLKQAMEMVGFLPATKKQIFSVLSAILYLGNVTYKKRATGRDEGLEVGPTEVLDTLSQLLKVKREVLVEVLTKRKTVTANDKLILPYSLSEAITARDSMAKSLYSALFDWIVLRINHALLNKKDMEESVSCLSIGVLDIFGFEDFETNSFEQFCINYANEQLQYYFNQHIFKLEQEEYQSEGIAWHNIDYTDNVTCIHLISKKPTGLFYLLDEESNFPHATNQTLLAKFKQQHEENKFFVGTPVKEPAFIIRHFAGKVKYQIKDFREKNMDYMRPDIVALLRSSDSAYVRELIGMDPVAVFRWAILRAAIRAMAVFAEAGRQRAQKTAGVVRHGPRVPLGELQRANTPIEKVYRCSVLDFSFDCSEDFDINAFEDIIAFYESKKDLHDQIIKSIKGLPWQGEDPCRLLRSLSRLQQPHVHFLKSRSTKQKQIIPKNLLDSKSLKLIVSMTLHDRTTKSLLHLHKKKKPPSISAQFQNSLNKLLETLGKAEPFFIRCIRSNAEKRELFFDEGLVLQQLRYTGMLETVRIRRSGYSAKYTFQDFIDQFQVLLPQNAKASKEEIWAHLNKLKLDKNNYQIGKTKVFMKEAERQMLQDTLHKEVIRKIVLLQSWLRMVLERRHFLRMRQATITLQTCWRSYRIRRALERTNAAIYIQSVWRRYRERESYHQQRRRISLVQALVRGHLQRKRFQQMIVEKQQEMQQAQEGEDSVSQEDGNELALEQLAVKPEMQLDQGIEQMAAGVDEAQNDGDEKLSHATEKAVPSQKSITDGHEKLTSSREKRESRRQRGLEHNKLQNKHVLFPLKQQSLVCQEEETSAKETPETVQEPNKFTAYKTVLPKGTEEERIPVEENKTLSDTQVPGEILDSDVSFPKQSNESKQEILDDKIIDKLKIQDNQKNQIKGSQSFTCPERPSDFSLHIKKNLTPTRSFQTGDENYGNKNKHRISKVDKDLDSPPSFQIQRYLHDPGELRDKREKWKGKRQSEAGQNDVLSESLDERNRTGQSPQTLLSKKGTTSSLDDIANLAQSVTMIQPSPETMAEEKSNKKQTLQKKSNEQLSLLDLAVSVQLPSQPMDAKSTFKIPLRKLLGKKPDKKYVRESPDVMEEGENLPLLSCILISESVESQKLSEAPSGHPRRPQAGERPVKETSKGKRNRTIKIKKISAVSEKRPASVIREITNANELKYLDEFLLNKINDLNSQKSATECLFFEATEKFRGNIKTMYSVPNGQIHVGYKDLIENYQLLVINLAKEREEKDVKLVLNLFQSLLDEFSRGYAKREESEQHKQSKTQKKKRKQERAIEEHNGHVFTSYQVSIRQSCEQCSSYIWPMEKACLCSTCKLICHKKCMSKTQSCCTSPCGKKNEQGVDSRHFGVCVSSLISDKNSVPVVMEKLLEYVEMHGLYTEGIYRKSGSANRMRELKQLLQTDPNSVKLENYPIHTITGILKQWLRELPDPLMTFAQYSDFLRAVELPEKQEQLIAIYSVLEQLPQANHNTLERLIFHLVKVALIEDVNRMSPNALAIVFAPCLLRCPDNSDPLTSMKDVSKTTILLFLWGCKCGEGQLWEHSVSTNVCAGAGRGQQVEEI
SIO_010081: MYO9B
subclass of: SO_0000673
so part of: MYO9B
location: join(695457..696293,717080..717174,722032..722094,723292..723391,724074..724174,724531..724660,725179..725268,725725..725841,726191..726325,729111..729232,729842..729983,730256..730451,731065..731140,734155..734244,735461..735574,736831..736870,737547..737669,738778..738858,740521..740631,740995..741117,741856..742005,742095..742261,742761..743723,744462..744528,745030..745160,745759..745916,747300..747490,748444..748542,749019..749195,749729..749770,753015..753126,754505..754578,754854..755046,755376..755504,756112..756217,757053..757184,758004..758115)
location: region:695457-758115:1
so has part: feature:695457-696293:1:exon
so has part: feature:717080-717174:1:exon
so has part: feature:722032-722094:1:exon
so has part: feature:723292-723391:1:exon
so has part: feature:724074-724174:1:exon
so has part: feature:724531-724660:1:exon
so has part: feature:725179-725268:1:exon
so has part: feature:725725-725841:1:exon
so has part: feature:726191-726325:1:exon
so has part: feature:729111-729232:1:exon
so has part: feature:729842-729983:1:exon
so has part: feature:730256-730451:1:exon
so has part: feature:731065-731140:1:exon
so has part: feature:734155-734244:1:exon
so has part: feature:735461-735574:1:exon
so has part: feature:736831-736870:1:exon
so has part: feature:737547-737669:1:exon
so has part: feature:738778-738858:1:exon
so has part: feature:740521-740631:1:exon
so has part: feature:740995-741117:1:exon
so has part: feature:741856-742005:1:exon
so has part: feature:742095-742261:1:exon
so has part: feature:742761-743723:1:exon
so has part: feature:744462-744528:1:exon
so has part: feature:745030-745160:1:exon
so has part: feature:745759-745916:1:exon
so has part: feature:747300-747490:1:exon
so has part: feature:748444-748542:1:exon
so has part: feature:749019-749195:1:exon
so has part: feature:749729-749770:1:exon
so has part: feature:753015-753126:1:exon
so has part: feature:754505-754578:1:exon
so has part: feature:754854-755046:1:exon
so has part: feature:755376-755504:1:exon
so has part: feature:756112-756217:1:exon
so has part: feature:757053-757184:1:exon
so has part: feature:758004-758115:1:exon

XP_030395917.1
type: Protein
SIO_000068: ncbiprotein

position:758115:1
position: 758115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695457-696293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:717080-717174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:722032-722094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:723292-723391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:724074-724174:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724531-724660:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:725179-725268:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:725725-725841:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726191-726325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:729111-729232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:729842-729983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:730256-730451:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:731065-731140:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:734155-734244:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735461-735574:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:736831-736870:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737547-737669:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:738778-738858:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:740521-740631:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:740995-741117:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:741856-742005:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:742095-742261:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:742761-743723:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:744462-744528:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:745030-745160:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:745759-745916:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:747300-747490:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:748444-748542:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:749019-749195:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:749729-749770:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:753015-753126:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:754505-754578:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:754854-755046:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:755376-755504:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:756112-756217:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:757053-757184:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:758004-758115:1:exon

USE1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: USE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 766267..781460
location: region:766267-781460:1
so has part: feature:766267-781460:1:exon
subclass of: SO_0000010

115638489
type: Gene
SIO_000068: ncbigene

position:766267:1
position: 766267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781460:1
position: 781460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766267-781460:1:exon

USE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: USE1
product: unconventional SNARE in the ER 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030540086.1
SIO_010081: USE1
subclass of: SO_0000673
so part of: USE1
location: join(766267..766399,770973..771022,771854..771932,772431..772583,773176..773194,774210..774240,774532..774694,779046..781460)
location: region:766267-781460:1
so has part: feature:766267-766399:1:exon
so has part: feature:770973-771022:1:exon
so has part: feature:771854-771932:1:exon
so has part: feature:772431-772583:1:exon
so has part: feature:773176-773194:1:exon
so has part: feature:774210-774240:1:exon
so has part: feature:774532-774694:1:exon
so has part: feature:779046-781460:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:766267-766399:1:exon

position:766399:1
position: 766399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770973-771022:1:exon

position:770973:1
position: 770973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771022:1
position: 771022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:771854-771932:1:exon

position:771854:1
position: 771854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771932:1
position: 771932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:772431-772583:1:exon

position:772431:1
position: 772431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772583:1
position: 772583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:773176-773194:1:exon

position:773176:1
position: 773176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773194:1
position: 773194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:774210-774240:1:exon

position:774210:1
position: 774210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774240:1
position: 774240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:774532-774694:1:exon

position:774532:1
position: 774532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774694:1
position: 774694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:779046-781460:1:exon

position:779046:1
position: 779046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: USE1
product: unconventional SNARE in the ER 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_030540084.1
SIO_010081: USE1
subclass of: SO_0000673
so part of: USE1
location: join(766267..766399,770973..771022,771854..771932,772431..772583,773176..773194,774210..774240,774532..774694,775237..776597)
location: region:766267-776597:1
so has part: feature:766267-766399:1:exon
so has part: feature:770973-771022:1:exon
so has part: feature:771854-771932:1:exon
so has part: feature:772431-772583:1:exon
so has part: feature:773176-773194:1:exon
so has part: feature:774210-774240:1:exon
so has part: feature:774532-774694:1:exon
so has part: feature:775237-776597:1:exon

position:776597:1
position: 776597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766267-766399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770973-771022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771854-771932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772431-772583:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:773176-773194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:774210-774240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:774532-774694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775237-776597:1:exon

position:775237:1
position: 775237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: USE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein USE1 isoform X3
translation: MAATRLELNLLRLLSRCEALAAERREPDEWRLEKYVDALEEMLLALKKHSSKPAPELLNEYARKVDFLKGMLEAEKLSSSAEKALANQFLAPGRTPTTAKERTPATKMVHLQTKARYTGKMRSELLGTDPLSVNESEELNLRKRKGFVSEEKQSATELDAVLQHHRSMQEKLAEEMLSLARSLKNNTLAAQNVIKQDNQNRVLRPQLEQMI
SIO_010081: USE1
subclass of: SO_0000673
so part of: USE1
location: join(766298..766399,770973..771022,771854..771932,772431..772583,773176..773194,774210..774240,774532..774694,779046..779084)
location: region:766298-779084:1
so has part: feature:766298-766399:1:exon
so has part: feature:770973-771022:1:exon
so has part: feature:771854-771932:1:exon
so has part: feature:772431-772583:1:exon
so has part: feature:773176-773194:1:exon
so has part: feature:774210-774240:1:exon
so has part: feature:774532-774694:1:exon
so has part: feature:779046-779084:1:exon

XP_030395946.1
type: Protein
SIO_000068: ncbiprotein

position:766298:1
position: 766298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779084:1
position: 779084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766298-766399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770973-771022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771854-771932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772431-772583:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:773176-773194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:774210-774240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:774532-774694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:779046-779084:1:exon

USE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: USE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein USE1 isoform X1
translation: MAATRLELNLLRLLSRCEALAAERREPDEWRLEKYVDALEEMLLALKKHSSKPAPELLNEYARKVDFLKGMLEAEKLSSSAEKALANQFLAPGRTPTTAKERTPATKMVHLQTKARYTGKMRSELLGTDPLSVNESEELNLRKRKGFVSEEKQSATELDAVLQHHRSMQEKLAEEMLSLARSLKNNTLAAQNVIKQDNQTLSHSLRMADHNFEKLKDESERLEQHAKKSVNWLLWIMLIVVCFIFISMILFIRIFPKLR
SIO_010081: USE1
subclass of: SO_0000673
so part of: USE1
location: join(766298..766399,770973..771022,771854..771932,772431..772583,773176..773194,774210..774240,774532..774694,775237..775419)
location: region:766298-775419:1
so has part: feature:766298-766399:1:exon
so has part: feature:770973-771022:1:exon
so has part: feature:771854-771932:1:exon
so has part: feature:772431-772583:1:exon
so has part: feature:773176-773194:1:exon
so has part: feature:774210-774240:1:exon
so has part: feature:774532-774694:1:exon
so has part: feature:775237-775419:1:exon

XP_030395944.1
type: Protein
SIO_000068: ncbiprotein

position:775419:1
position: 775419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766298-766399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770973-771022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771854-771932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772431-772583:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:773176-773194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:774210-774240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:774532-774694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775237-775419:1:exon

USE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: USE1
product: unconventional SNARE in the ER 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030540085.1
SIO_010081: USE1
subclass of: SO_0000673
so part of: USE1
location: join(767608..769805,770973..771022,771854..771932,772431..772583,773176..773194,774210..774240,774532..774694,775237..776597)
location: region:767608-776597:1
so has part: feature:767608-769805:1:exon
so has part: feature:770973-771022:1:exon
so has part: feature:771854-771932:1:exon
so has part: feature:772431-772583:1:exon
so has part: feature:773176-773194:1:exon
so has part: feature:774210-774240:1:exon
so has part: feature:774532-774694:1:exon
so has part: feature:775237-776597:1:exon

position:767608:1
position: 767608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767608-769805:1:exon

position:769805:1
position: 769805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770973-771022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771854-771932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772431-772583:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:773176-773194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:774210-774240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:774532-774694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775237-776597:1:exon

USE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: USE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein USE1 isoform X2
translation: MLLALKKHSSKPAPELLNEYARKVDFLKGMLEAEKLSSSAEKALANQFLAPGRTPTTAKERTPATKMVHLQTKARYTGKMRSELLGTDPLSVNESEELNLRKRKGFVSEEKQSATELDAVLQHHRSMQEKLAEEMLSLARSLKNNTLAAQNVIKQDNQTLSHSLRMADHNFEKLKDESERLEQHAKKSVNWLLWIMLIVVCFIFISMILFIRIFPKLR
SIO_010081: USE1
subclass of: SO_0000673
so part of: USE1
location: join(770994..771022,771854..771932,772431..772583,773176..773194,774210..774240,774532..774694,775237..775419)
location: region:770994-775419:1
so has part: feature:770994-771022:1:exon
so has part: feature:771854-771932:1:exon
so has part: feature:772431-772583:1:exon
so has part: feature:773176-773194:1:exon
so has part: feature:774210-774240:1:exon
so has part: feature:774532-774694:1:exon
so has part: feature:775237-775419:1:exon

XP_030395945.1
type: Protein
SIO_000068: ncbiprotein

position:770994:1
position: 770994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770994-771022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:771854-771932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:772431-772583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:773176-773194:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774210-774240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:774532-774694:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:775237-775419:1:exon

INSR
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: INSR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 779049..895227
location: region:779049-895227:1
so has part: feature:779049-895227:1:exon
subclass of: SO_0000010

115638475
type: Gene
SIO_000068: ncbigene

position:779049:1
position: 779049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895227:1
position: 895227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779049-895227:1:exon

INSR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: INSR
product: insulin receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030540061.1
SIO_010081: INSR
subclass of: SO_0000673
so part of: INSR
location: join(779049..779128,809641..810192,863193..863508,866403..866548,866988..867132,867352..867566,869691..869817,871825..872075,872980..873147,874344..874545,879158..879432,879705..879847,882611..882770,883571..883670,885802..885869,887107..887336,888897..889007,889105..889264,890283..890412,890610..890744,892505..895227)
location: region:779049-895227:1
so has part: feature:779049-779128:1:exon
so has part: feature:809641-810192:1:exon
so has part: feature:863193-863508:1:exon
so has part: feature:866403-866548:1:exon
so has part: feature:866988-867132:1:exon
so has part: feature:867352-867566:1:exon
so has part: feature:869691-869817:1:exon
so has part: feature:871825-872075:1:exon
so has part: feature:872980-873147:1:exon
so has part: feature:874344-874545:1:exon
so has part: feature:879158-879432:1:exon
so has part: feature:879705-879847:1:exon
so has part: feature:882611-882770:1:exon
so has part: feature:883571-883670:1:exon
so has part: feature:885802-885869:1:exon
so has part: feature:887107-887336:1:exon
so has part: feature:888897-889007:1:exon
so has part: feature:889105-889264:1:exon
so has part: feature:890283-890412:1:exon
so has part: feature:890610-890744:1:exon
so has part: feature:892505-895227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779049-779128:1:exon

position:779128:1
position: 779128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:809641-810192:1:exon

position:809641:1
position: 809641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810192:1
position: 810192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:863193-863508:1:exon

position:863193:1
position: 863193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863508:1
position: 863508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:866403-866548:1:exon

position:866403:1
position: 866403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866548:1
position: 866548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:866988-867132:1:exon

position:866988:1
position: 866988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867132:1
position: 867132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:867352-867566:1:exon

position:867352:1
position: 867352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867566:1
position: 867566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:869691-869817:1:exon

position:869691:1
position: 869691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869817:1
position: 869817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:871825-872075:1:exon

position:871825:1
position: 871825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872075:1
position: 872075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:872980-873147:1:exon

position:872980:1
position: 872980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873147:1
position: 873147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:874344-874545:1:exon

position:874344:1
position: 874344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874545:1
position: 874545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:879158-879432:1:exon

position:879158:1
position: 879158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879432:1
position: 879432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:879705-879847:1:exon

position:879705:1
position: 879705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879847:1
position: 879847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:882611-882770:1:exon

position:882611:1
position: 882611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882770:1
position: 882770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:883571-883670:1:exon

position:883571:1
position: 883571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883670:1
position: 883670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:885802-885869:1:exon

position:885802:1
position: 885802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885869:1
position: 885869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:887107-887336:1:exon

position:887107:1
position: 887107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887336:1
position: 887336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:888897-889007:1:exon

position:888897:1
position: 888897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889007:1
position: 889007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:889105-889264:1:exon

position:889105:1
position: 889105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889264:1
position: 889264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:890283-890412:1:exon

position:890283:1
position: 890283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890412:1
position: 890412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:890610-890744:1:exon

position:890610:1
position: 890610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890744:1
position: 890744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:892505-895227:1:exon

position:892505:1
position: 892505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INSR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: INSR
product: insulin receptor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030540062.1
SIO_010081: INSR
subclass of: SO_0000673
so part of: INSR
location: join(795474..795540,809641..810192,863193..863508,866403..866548,866988..867132,867352..867566,869691..869817,871825..872075,872980..873147,874344..874545,877818..877853,879158..879432,879705..879847,882611..882770,883571..883670,885802..885869,887107..887336,888897..889007,889105..889264,890283..890412,890610..890744,892505..895227)
location: region:795474-895227:1
so has part: feature:795474-795540:1:exon
so has part: feature:809641-810192:1:exon
so has part: feature:863193-863508:1:exon
so has part: feature:866403-866548:1:exon
so has part: feature:866988-867132:1:exon
so has part: feature:867352-867566:1:exon
so has part: feature:869691-869817:1:exon
so has part: feature:871825-872075:1:exon
so has part: feature:872980-873147:1:exon
so has part: feature:874344-874545:1:exon
so has part: feature:877818-877853:1:exon
so has part: feature:879158-879432:1:exon
so has part: feature:879705-879847:1:exon
so has part: feature:882611-882770:1:exon
so has part: feature:883571-883670:1:exon
so has part: feature:885802-885869:1:exon
so has part: feature:887107-887336:1:exon
so has part: feature:888897-889007:1:exon
so has part: feature:889105-889264:1:exon
so has part: feature:890283-890412:1:exon
so has part: feature:890610-890744:1:exon
so has part: feature:892505-895227:1:exon

position:795474:1
position: 795474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795474-795540:1:exon

position:795540:1
position: 795540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:809641-810192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863193-863508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866403-866548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866988-867132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867352-867566:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:869691-869817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871825-872075:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:872980-873147:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874344-874545:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:877818-877853:1:exon

position:877818:1
position: 877818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877853:1
position: 877853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:879158-879432:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:879705-879847:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:882611-882770:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:883571-883670:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885802-885869:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:887107-887336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:888897-889007:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:889105-889264:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:890283-890412:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:890610-890744:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:892505-895227:1:exon

INSR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: INSR
product: insulin receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030540060.1
SIO_010081: INSR
subclass of: SO_0000673
so part of: INSR
location: join(795474..795540,809641..810192,863193..863508,866403..866548,866988..867132,867352..867566,869691..869817,871825..872075,872980..873147,874344..874545,879158..879432,879705..879847,882611..882770,883571..883670,885802..885869,887107..887336,888897..889007,889105..889264,890283..890412,890610..890744,892505..895227)
location: region:795474-895227:1
so has part: feature:795474-795540:1:exon
so has part: feature:809641-810192:1:exon
so has part: feature:863193-863508:1:exon
so has part: feature:866403-866548:1:exon
so has part: feature:866988-867132:1:exon
so has part: feature:867352-867566:1:exon
so has part: feature:869691-869817:1:exon
so has part: feature:871825-872075:1:exon
so has part: feature:872980-873147:1:exon
so has part: feature:874344-874545:1:exon
so has part: feature:879158-879432:1:exon
so has part: feature:879705-879847:1:exon
so has part: feature:882611-882770:1:exon
so has part: feature:883571-883670:1:exon
so has part: feature:885802-885869:1:exon
so has part: feature:887107-887336:1:exon
so has part: feature:888897-889007:1:exon
so has part: feature:889105-889264:1:exon
so has part: feature:890283-890412:1:exon
so has part: feature:890610-890744:1:exon
so has part: feature:892505-895227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:795474-795540:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809641-810192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863193-863508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866403-866548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866988-867132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867352-867566:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:869691-869817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871825-872075:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:872980-873147:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874344-874545:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:879158-879432:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:879705-879847:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882611-882770:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883571-883670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885802-885869:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:887107-887336:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:888897-889007:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:889105-889264:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890283-890412:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:890610-890744:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892505-895227:1:exon

INSR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: INSR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin receptor isoform X2
translation: MDIRNNLTRLNRLENCTVIEGHLQILLMFKTKPEDFRELSFPKLTMITDYLLLFRVYGLESLKGLFPNLTVIRGTHLFFNYALVIFEMVHLKEIGLYNLMNITRGAVRIEKNNELCYLSTIDWSRILDSVEDNYIVANKDDTEECGDVCPGTVKGKSNCPPTVINGIFIERCWTHDHCQRVCPPDCKSQGCTSDGQCCHSECLGNCSEPNNPEKCVACRNFYLDGKCVETCPAKYYRFEGWRCVTFSFCQELHNKCKNARESGCHVIHNNECVHECPSGYIMNSSNLHCSPCAGPCPKVCDYSKEKIIDSVTSAQELRGCTIVNGSLVINIRGGNNIAAELEANLGLIEEISGYLKIRRSYALVSLSFFRKLHLIKGETLEAGNYSFYALDNQNLRQLWDWSKHNLSIARGKLFFHYNPKLCLSEIHKMEEISGTKGRQERNDIALKTNGDQASCENELLKFSSIKTSHDKILLKWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDVDPPPRSNEPKAQAQPGWLLRGLKPWTQYAVFVKTLVTFSDERRTYGAKSEIIYVQTNATVPSVPLDPISVSNSSSQIILKWKPPSEPNGNITHYLVFWQQQLEDSELFELDYCLKGLKLPSRTWSPPFESEDPHKYNQSENEDISGECCSCPKTDSQIQKEQEESAFRKMFENYLHNVVFVPRKITSGNGTEDSRPSRKRRDLGSVANTTVVVPTIPSSLNTSSAIAPENVEEQKPFERVKSKESLVISGLRHFTGYRIELHACNHDAQESRCGVAAYVSARTMPEAKADDIVGPVTHELVEKNAVHLKWQEPKEPNGLIVLYEVNYGRLGEPEEAHYCVSRKQFANEQGCKLRGLQPGNYSVRIRATSLAGNGSWTEPSYFYVADYLNPQSNIAVVVVPIIFCIIIAGIIGAAYVFVKKRQTEGPTGPLYASSNPEYLSASDVYVPDEWEVPRDKINLLRELGQGSFGMVYEGIAKDIVKGEPETRVAVKTVNESASLRERIEFLNEASVMKGFSCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPDAENNPGRPPPTLREMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTAYSDVWSFGVVLWEISSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERLHSLMQMCWQYNPKMRPTFIEIIEMLKEDLHPSFQEVSFFYSEENKPPETEEFEMDFENMESIPLDPSSYSQRDKVLGRDNGPSMGLKGNYEEHIPYTHMNGGKKNGRILSMPRSSPS
SIO_010081: INSR
subclass of: SO_0000673
so part of: INSR
location: join(809652..810192,863193..863508,866403..866548,866988..867132,867352..867566,869691..869817,871825..872075,872980..873147,874344..874545,877818..877853,879158..879432,879705..879847,882611..882770,883571..883670,885802..885869,887107..887336,888897..889007,889105..889264,890283..890412,890610..890744,892505..892859)
location: region:809652-892859:1
so has part: feature:809652-810192:1:exon
so has part: feature:863193-863508:1:exon
so has part: feature:866403-866548:1:exon
so has part: feature:866988-867132:1:exon
so has part: feature:867352-867566:1:exon
so has part: feature:869691-869817:1:exon
so has part: feature:871825-872075:1:exon
so has part: feature:872980-873147:1:exon
so has part: feature:874344-874545:1:exon
so has part: feature:877818-877853:1:exon
so has part: feature:879158-879432:1:exon
so has part: feature:879705-879847:1:exon
so has part: feature:882611-882770:1:exon
so has part: feature:883571-883670:1:exon
so has part: feature:885802-885869:1:exon
so has part: feature:887107-887336:1:exon
so has part: feature:888897-889007:1:exon
so has part: feature:889105-889264:1:exon
so has part: feature:890283-890412:1:exon
so has part: feature:890610-890744:1:exon
so has part: feature:892505-892859:1:exon

XP_030395922.1
type: Protein
SIO_000068: ncbiprotein

position:809652:1
position: 809652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892859:1
position: 892859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809652-810192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863193-863508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866403-866548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866988-867132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867352-867566:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:869691-869817:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:871825-872075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:872980-873147:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874344-874545:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:877818-877853:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:879158-879432:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:879705-879847:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882611-882770:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883571-883670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885802-885869:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:887107-887336:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:888897-889007:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:889105-889264:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890283-890412:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:890610-890744:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:892505-892859:1:exon

INSR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: INSR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin receptor isoform X1
translation: MDIRNNLTRLNRLENCTVIEGHLQILLMFKTKPEDFRELSFPKLTMITDYLLLFRVYGLESLKGLFPNLTVIRGTHLFFNYALVIFEMVHLKEIGLYNLMNITRGAVRIEKNNELCYLSTIDWSRILDSVEDNYIVANKDDTEECGDVCPGTVKGKSNCPPTVINGIFIERCWTHDHCQRVCPPDCKSQGCTSDGQCCHSECLGNCSEPNNPEKCVACRNFYLDGKCVETCPAKYYRFEGWRCVTFSFCQELHNKCKNARESGCHVIHNNECVHECPSGYIMNSSNLHCSPCAGPCPKVCDYSKEKIIDSVTSAQELRGCTIVNGSLVINIRGGNNIAAELEANLGLIEEISGYLKIRRSYALVSLSFFRKLHLIKGETLEAGNYSFYALDNQNLRQLWDWSKHNLSIARGKLFFHYNPKLCLSEIHKMEEISGTKGRQERNDIALKTNGDQASCENELLKFSSIKTSHDKILLKWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDVDPPPRSNEPKAQAQPGWLLRGLKPWTQYAVFVKTLVTFSDERRTYGAKSEIIYVQTNATVPSVPLDPISVSNSSSQIILKWKPPSEPNGNITHYLVFWQQQLEDSELFELDYCLKGLKLPSRTWSPPFESEDPHKYNQSENEDISGECCSCPKTDSQIQKEQEESAFRKMFENYLHNVVFVPRPSRKRRDLGSVANTTVVVPTIPSSLNTSSAIAPENVEEQKPFERVKSKESLVISGLRHFTGYRIELHACNHDAQESRCGVAAYVSARTMPEAKADDIVGPVTHELVEKNAVHLKWQEPKEPNGLIVLYEVNYGRLGEPEEAHYCVSRKQFANEQGCKLRGLQPGNYSVRIRATSLAGNGSWTEPSYFYVADYLNPQSNIAVVVVPIIFCIIIAGIIGAAYVFVKKRQTEGPTGPLYASSNPEYLSASDVYVPDEWEVPRDKINLLRELGQGSFGMVYEGIAKDIVKGEPETRVAVKTVNESASLRERIEFLNEASVMKGFSCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPDAENNPGRPPPTLREMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTAYSDVWSFGVVLWEISSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERLHSLMQMCWQYNPKMRPTFIEIIEMLKEDLHPSFQEVSFFYSEENKPPETEEFEMDFENMESIPLDPSSYSQRDKVLGRDNGPSMGLKGNYEEHIPYTHMNGGKKNGRILSMPRSSPS
SIO_010081: INSR
subclass of: SO_0000673
so part of: INSR
location: join(809652..810192,863193..863508,866403..866548,866988..867132,867352..867566,869691..869817,871825..872075,872980..873147,874344..874545,879158..879432,879705..879847,882611..882770,883571..883670,885802..885869,887107..887336,888897..889007,889105..889264,890283..890412,890610..890744,892505..892859)
location: region:809652-892859:1
so has part: feature:809652-810192:1:exon
so has part: feature:863193-863508:1:exon
so has part: feature:866403-866548:1:exon
so has part: feature:866988-867132:1:exon
so has part: feature:867352-867566:1:exon
so has part: feature:869691-869817:1:exon
so has part: feature:871825-872075:1:exon
so has part: feature:872980-873147:1:exon
so has part: feature:874344-874545:1:exon
so has part: feature:879158-879432:1:exon
so has part: feature:879705-879847:1:exon
so has part: feature:882611-882770:1:exon
so has part: feature:883571-883670:1:exon
so has part: feature:885802-885869:1:exon
so has part: feature:887107-887336:1:exon
so has part: feature:888897-889007:1:exon
so has part: feature:889105-889264:1:exon
so has part: feature:890283-890412:1:exon
so has part: feature:890610-890744:1:exon
so has part: feature:892505-892859:1:exon

XP_030395920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:809652-810192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863193-863508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866403-866548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866988-867132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867352-867566:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:869691-869817:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:871825-872075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:872980-873147:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874344-874545:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:879158-879432:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:879705-879847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882611-882770:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:883571-883670:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:885802-885869:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:887107-887336:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:888897-889007:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:889105-889264:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:890283-890412:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890610-890744:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:892505-892859:1:exon

INSR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: INSR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin receptor isoform X1
translation: MDIRNNLTRLNRLENCTVIEGHLQILLMFKTKPEDFRELSFPKLTMITDYLLLFRVYGLESLKGLFPNLTVIRGTHLFFNYALVIFEMVHLKEIGLYNLMNITRGAVRIEKNNELCYLSTIDWSRILDSVEDNYIVANKDDTEECGDVCPGTVKGKSNCPPTVINGIFIERCWTHDHCQRVCPPDCKSQGCTSDGQCCHSECLGNCSEPNNPEKCVACRNFYLDGKCVETCPAKYYRFEGWRCVTFSFCQELHNKCKNARESGCHVIHNNECVHECPSGYIMNSSNLHCSPCAGPCPKVCDYSKEKIIDSVTSAQELRGCTIVNGSLVINIRGGNNIAAELEANLGLIEEISGYLKIRRSYALVSLSFFRKLHLIKGETLEAGNYSFYALDNQNLRQLWDWSKHNLSIARGKLFFHYNPKLCLSEIHKMEEISGTKGRQERNDIALKTNGDQASCENELLKFSSIKTSHDKILLKWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDVDPPPRSNEPKAQAQPGWLLRGLKPWTQYAVFVKTLVTFSDERRTYGAKSEIIYVQTNATVPSVPLDPISVSNSSSQIILKWKPPSEPNGNITHYLVFWQQQLEDSELFELDYCLKGLKLPSRTWSPPFESEDPHKYNQSENEDISGECCSCPKTDSQIQKEQEESAFRKMFENYLHNVVFVPRPSRKRRDLGSVANTTVVVPTIPSSLNTSSAIAPENVEEQKPFERVKSKESLVISGLRHFTGYRIELHACNHDAQESRCGVAAYVSARTMPEAKADDIVGPVTHELVEKNAVHLKWQEPKEPNGLIVLYEVNYGRLGEPEEAHYCVSRKQFANEQGCKLRGLQPGNYSVRIRATSLAGNGSWTEPSYFYVADYLNPQSNIAVVVVPIIFCIIIAGIIGAAYVFVKKRQTEGPTGPLYASSNPEYLSASDVYVPDEWEVPRDKINLLRELGQGSFGMVYEGIAKDIVKGEPETRVAVKTVNESASLRERIEFLNEASVMKGFSCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPDAENNPGRPPPTLREMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTAYSDVWSFGVVLWEISSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERLHSLMQMCWQYNPKMRPTFIEIIEMLKEDLHPSFQEVSFFYSEENKPPETEEFEMDFENMESIPLDPSSYSQRDKVLGRDNGPSMGLKGNYEEHIPYTHMNGGKKNGRILSMPRSSPS
SIO_010081: INSR
subclass of: SO_0000673
so part of: INSR
location: join(809652..810192,863193..863508,866403..866548,866988..867132,867352..867566,869691..869817,871825..872075,872980..873147,874344..874545,879158..879432,879705..879847,882611..882770,883571..883670,885802..885869,887107..887336,888897..889007,889105..889264,890283..890412,890610..890744,892505..892859)
location: region:809652-892859:1
so has part: feature:809652-810192:1:exon
so has part: feature:863193-863508:1:exon
so has part: feature:866403-866548:1:exon
so has part: feature:866988-867132:1:exon
so has part: feature:867352-867566:1:exon
so has part: feature:869691-869817:1:exon
so has part: feature:871825-872075:1:exon
so has part: feature:872980-873147:1:exon
so has part: feature:874344-874545:1:exon
so has part: feature:879158-879432:1:exon
so has part: feature:879705-879847:1:exon
so has part: feature:882611-882770:1:exon
so has part: feature:883571-883670:1:exon
so has part: feature:885802-885869:1:exon
so has part: feature:887107-887336:1:exon
so has part: feature:888897-889007:1:exon
so has part: feature:889105-889264:1:exon
so has part: feature:890283-890412:1:exon
so has part: feature:890610-890744:1:exon
so has part: feature:892505-892859:1:exon

XP_030395921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:809652-810192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863193-863508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866403-866548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866988-867132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867352-867566:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:869691-869817:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:871825-872075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:872980-873147:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874344-874545:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:879158-879432:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:879705-879847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:882611-882770:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:883571-883670:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:885802-885869:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:887107-887336:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:888897-889007:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:889105-889264:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:890283-890412:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:890610-890744:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:892505-892859:1:exon

LOC115638464
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638464
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 911049..949159
location: region:911049-949159:1
so has part: feature:911049-949159:1:exon
subclass of: SO_0000010

115638464
type: Gene
SIO_000068: ncbigene

position:911049:1
position: 911049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949159:1
position: 949159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911049-949159:1:exon

LOC115638464
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638464
product: rho guanine nucleotide exchange factor 18-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540022.1
SIO_010081: LOC115638464
subclass of: SO_0000673
so part of: LOC115638464
location: join(911049..911395,915913..916049,929688..929824,931089..931591,936210..936414,937242..937356,938640..938697,939144..939188,939557..939637,940141..940246,940990..941143,949033..949159)
location: region:911049-949159:1
so has part: feature:911049-911395:1:exon
so has part: feature:915913-916049:1:exon
so has part: feature:929688-929824:1:exon
so has part: feature:931089-931591:1:exon
so has part: feature:936210-936414:1:exon
so has part: feature:937242-937356:1:exon
so has part: feature:938640-938697:1:exon
so has part: feature:939144-939188:1:exon
so has part: feature:939557-939637:1:exon
so has part: feature:940141-940246:1:exon
so has part: feature:940990-941143:1:exon
so has part: feature:949033-949159:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:911049-911395:1:exon

position:911395:1
position: 911395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:915913-916049:1:exon

position:915913:1
position: 915913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916049:1
position: 916049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:929688-929824:1:exon

position:929688:1
position: 929688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929824:1
position: 929824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:931089-931591:1:exon

position:931089:1
position: 931089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931591:1
position: 931591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:936210-936414:1:exon

position:936210:1
position: 936210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936414:1
position: 936414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:937242-937356:1:exon

position:937242:1
position: 937242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937356:1
position: 937356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:938640-938697:1:exon

position:938640:1
position: 938640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938697:1
position: 938697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:939144-939188:1:exon

position:939144:1
position: 939144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939188:1
position: 939188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:939557-939637:1:exon

position:939557:1
position: 939557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939637:1
position: 939637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:940141-940246:1:exon

position:940141:1
position: 940141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940246:1
position: 940246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:940990-941143:1:exon

position:940990:1
position: 940990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941143:1
position: 941143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:949033-949159:1:exon

position:949033:1
position: 949033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115638464
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638464
product: rho guanine nucleotide exchange factor 18-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540021.1
SIO_010081: LOC115638464
subclass of: SO_0000673
so part of: LOC115638464
location: join(911049..911395,915913..916049,929688..929824,931089..931591,936210..936414,937242..937356,938640..938697,939144..939188,939557..939637,940141..940246,940990..941143,944671..947696)
location: region:911049-947696:1
so has part: feature:911049-911395:1:exon
so has part: feature:915913-916049:1:exon
so has part: feature:929688-929824:1:exon
so has part: feature:931089-931591:1:exon
so has part: feature:936210-936414:1:exon
so has part: feature:937242-937356:1:exon
so has part: feature:938640-938697:1:exon
so has part: feature:939144-939188:1:exon
so has part: feature:939557-939637:1:exon
so has part: feature:940141-940246:1:exon
so has part: feature:940990-941143:1:exon
so has part: feature:944671-947696:1:exon

position:947696:1
position: 947696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911049-911395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:915913-916049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:929688-929824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:931089-931591:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:936210-936414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:937242-937356:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:938640-938697:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:939144-939188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:939557-939637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:940141-940246:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:940990-941143:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:944671-947696:1:exon

position:944671:1
position: 944671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115638464
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638464
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 18-like isoform X2
translation: MADSLLNHSWPSFSKRWMKRWSFKRGSDCKPCSREFAASGIPTSDCSSPDTFSPSLIAEDEVFFTSMAEEKEDSLSLEPDALMGDVHSSTEDLLSIDFALHGTEYYRDLGLPNLPEASATPAMAMLPEQTGQVVHSSPVLEEKPGGLGRTLVGIACPDPISGSVQYRETSCHFLNSDSACSCAAGPQDSPPVRGCLAEQAKGLELHEDEQSFPALMRSVSTSRRHSWESPVSPTDSERRLSLDASEMASDLEQEELERTLPCLAPCVSLELPTAGVEAWGGSGSTLIKVEIEPLHLNFAIVPDHEDTEYGSNGKRLRTKSVPSTCNKVSSPQISHNLEVSLPVAKGIEPPALETIEKDHVAPDHVLIVQQVLQELKQFHGAKQGACTAEGSNESQQNLTWFEFLSNEAEDNGKSDKTERGTKVKRRLSSLRSRVTGSWQKDKGKNKDQPKEREKSQKWKRVNGHQLVPGTFSSFTSCSLCAKPLVNKNGLQCLSPGFPQALEANLLIRKKC
SIO_010081: LOC115638464
subclass of: SO_0000673
so part of: LOC115638464
location: join(915974..916049,929688..929824,931089..931591,936210..936414,937242..937356,938640..938697,939144..939188,939557..939637,940141..940246,940990..941143,949033..949088)
location: region:915974-949088:1
so has part: feature:915974-916049:1:exon
so has part: feature:929688-929824:1:exon
so has part: feature:931089-931591:1:exon
so has part: feature:936210-936414:1:exon
so has part: feature:937242-937356:1:exon
so has part: feature:938640-938697:1:exon
so has part: feature:939144-939188:1:exon
so has part: feature:939557-939637:1:exon
so has part: feature:940141-940246:1:exon
so has part: feature:940990-941143:1:exon
so has part: feature:949033-949088:1:exon

XP_030395882.1
type: Protein
SIO_000068: ncbiprotein

position:915974:1
position: 915974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949088:1
position: 949088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915974-916049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929688-929824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931089-931591:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:936210-936414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937242-937356:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:938640-938697:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:939144-939188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:939557-939637:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:940141-940246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:940990-941143:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:949033-949088:1:exon

LOC115638464
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638464
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115638464 isoform X1
translation: MADSLLNHSWPSFSKRWMKRWSFKRGSDCKPCSREFAASGIPTSDCSSPDTFSPSLIAEDEVFFTSMAEEKEDSLSLEPDALMGDVHSSTEDLLSIDFALHGTEYYRDLGLPNLPEASATPAMAMLPEQTGQVVHSSPVLEEKPGGLGRTLVGIACPDPISGSVQYRETSCHFLNSDSACSCAAGPQDSPPVRGCLAEQAKGLELHEDEQSFPALMRSVSTSRRHSWESPVSPTDSERRLSLDASEMASDLEQEELERTLPCLAPCVSLELPTAGVEAWGGSGSTLIKVEIEPLHLNFAIVPDHEDTEYGSNGKRLRTKSVPSTCNKVSSPQISHNLEVSLPVAKGIEPPALETIEKDHVAPDHVLIVQQVLQELKQFHGAKQGACTAEGSNESQQNLTWFEFLSNEAEDNGKSDKTERGTKVKRRLSSLRSRVTGSWQKDKGKNKDQPKEREKSQKWKRVNGHQLVPGTFSSFTSCSLCAKPLVNKNGLQCLSEGCVRQCAALGTMGIRKRVCRDLPARDMLNSITATKALCRFQGSSSPL
SIO_010081: LOC115638464
subclass of: SO_0000673
so part of: LOC115638464
location: join(915974..916049,929688..929824,931089..931591,936210..936414,937242..937356,938640..938697,939144..939188,939557..939637,940141..940246,940990..941143,944671..944819)
location: region:915974-944819:1
so has part: feature:915974-916049:1:exon
so has part: feature:929688-929824:1:exon
so has part: feature:931089-931591:1:exon
so has part: feature:936210-936414:1:exon
so has part: feature:937242-937356:1:exon
so has part: feature:938640-938697:1:exon
so has part: feature:939144-939188:1:exon
so has part: feature:939557-939637:1:exon
so has part: feature:940141-940246:1:exon
so has part: feature:940990-941143:1:exon
so has part: feature:944671-944819:1:exon

XP_030395881.1
type: Protein
SIO_000068: ncbiprotein

position:944819:1
position: 944819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915974-916049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929688-929824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931089-931591:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:936210-936414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937242-937356:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:938640-938697:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:939144-939188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:939557-939637:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:940141-940246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:940990-941143:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:944671-944819:1:exon

ARHGEF18
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: ARHGEF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 967950..1000101
location: region:967950-1000101:1
so has part: feature:967950-1000101:1:exon
subclass of: SO_0000010

115638463
type: Gene
SIO_000068: ncbigene

position:967950:1
position: 967950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000101:1
position: 1000101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967950-1000101:1:exon

ARHGEF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: ARHGEF18
product: Rho/Rac guanine nucleotide exchange factor 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030540019.1
SIO_010081: ARHGEF18
subclass of: SO_0000673
so part of: ARHGEF18
location: join(967950..968350,969183..969295,969457..969597,971086..971336,972139..972264,973592..973709,974148..974396,978833..978909,981392..981570,982107..982198,983479..983667,984345..984482,987755..987879,988818..988874,989369..989416,990068..990535,991391..991715,994645..994767,994861..1000101)
location: region:967950-1000101:1
so has part: feature:967950-968350:1:exon
so has part: feature:969183-969295:1:exon
so has part: feature:969457-969597:1:exon
so has part: feature:971086-971336:1:exon
so has part: feature:972139-972264:1:exon
so has part: feature:973592-973709:1:exon
so has part: feature:974148-974396:1:exon
so has part: feature:978833-978909:1:exon
so has part: feature:981392-981570:1:exon
so has part: feature:982107-982198:1:exon
so has part: feature:983479-983667:1:exon
so has part: feature:984345-984482:1:exon
so has part: feature:987755-987879:1:exon
so has part: feature:988818-988874:1:exon
so has part: feature:989369-989416:1:exon
so has part: feature:990068-990535:1:exon
so has part: feature:991391-991715:1:exon
so has part: feature:994645-994767:1:exon
so has part: feature:994861-1000101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967950-968350:1:exon

position:968350:1
position: 968350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:969183-969295:1:exon

position:969183:1
position: 969183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969295:1
position: 969295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:969457-969597:1:exon

position:969457:1
position: 969457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969597:1
position: 969597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:971086-971336:1:exon

position:971086:1
position: 971086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971336:1
position: 971336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:972139-972264:1:exon

position:972139:1
position: 972139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972264:1
position: 972264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:973592-973709:1:exon

position:973592:1
position: 973592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973709:1
position: 973709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:974148-974396:1:exon

position:974148:1
position: 974148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974396:1
position: 974396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:978833-978909:1:exon

position:978833:1
position: 978833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978909:1
position: 978909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:981392-981570:1:exon

position:981392:1
position: 981392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981570:1
position: 981570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:982107-982198:1:exon

position:982107:1
position: 982107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982198:1
position: 982198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:983479-983667:1:exon

position:983479:1
position: 983479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983667:1
position: 983667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:984345-984482:1:exon

position:984345:1
position: 984345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984482:1
position: 984482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:987755-987879:1:exon

position:987755:1
position: 987755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987879:1
position: 987879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:988818-988874:1:exon

position:988818:1
position: 988818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988874:1
position: 988874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:989369-989416:1:exon

position:989369:1
position: 989369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989416:1
position: 989416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:990068-990535:1:exon

position:990068:1
position: 990068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990535:1
position: 990535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:991391-991715:1:exon

position:991391:1
position: 991391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991715:1
position: 991715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:994645-994767:1:exon

position:994645:1
position: 994645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994767:1
position: 994767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:994861-1000101:1:exon

position:994861:1
position: 994861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGEF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: ARHGEF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 18
translation: MGNTNSKSSGRNNTMPAPPELSFCSSFSRKWNENVFLDNELLTSKILSALQPRSERRGLRAGSLQCAPHFLSTNSVFASVAASLKEQPRSALLGSDGTPVLSRHLGMTITQRGNPQSALNTADSVHRFGPITGEMDEGDSGFIKFKQTSDDVVSLAPSTAESIFLEDAYASSLRSEIETDAHEFEAESWSLTVEPSYAKEQKGAVMKRQDVIYELMQTEMHHVRTLKIMLKVYSKALREELQFTNAVINKIFPCVDELLELHGQFLFQLKERRKASLEEGSDRNYIIQNIGDLLVQQFSGESGERMKEKYSLFCCGHNEAVSHYKDLLQSNKKFQNLIKKIGNSSIVRRLGVQECILLVTQRITKYPVLVERIIQNTEAGTKDYEDLSQALSLIKDMITHVDAKVNECEKRQRLREIMYKMELKSSGKFKNGLLFRKNDMGQRQLLLDGTLFWKAASGRLKDILAVLLTDVLLLLQEKDQKYTFASVDSKPPVISLQKLIVREVANEEKAMFLISASLKGPEMYEIHTSSKEERNSWMAHIRRAVESCPDEEEGTFSEPEEERRLAEARIAKLKEFQDRLSMKDDLILQSLNEKQQIYLEMSEMNGFEDLSQGSRSRLLFRGETSENLQGEVILKSAVTEIENLQNLIFTQLANVTCHSEDSCGLGLPRRAETFGGYDSTTTVPNKNGSFKTTVCGSDQRLRDGRGAVVSSDVQLQDLPPDAEEGPHTSDVMRLDYNSSFQPLLESELVQRIQRLSQLLLSLQVVISQQDSYIEIQRATIIDREKQYRLQSTRGNLLLEQEKQRNFEKQREELANVQKLQNQLKVEQQRWERERDRQQRELESIEARLQEREEETRQLKDRLNQERVELERQREAYQHDLERLREAQRAVEKERERVEQLKKLKKQNTVLGAFSSEMGQSQMLNHSVSFNGEGIEGSVPHVKPSGRASVSGVDYVERPELVRRDSAILENRPVLAMKNDVPIHLLSATNQIQKQAAVQQQIPTKLATFTKGSKEKGKSKASHRTDSSASVDLKQLLTPKLVGKDEGALKNRRSASPVLPNSQSIAFQPEIYSPADSQPETVNPFKPNSVHVHTLVASLPALRNAEDDTCKEDVIFF
SIO_010081: ARHGEF18
subclass of: SO_0000673
so part of: ARHGEF18
location: join(967965..968350,969183..969295,969457..969597,971086..971336,972139..972264,973592..973709,974148..974396,978833..978909,981392..981570,982107..982198,983479..983667,984345..984482,987755..987879,988818..988874,989369..989416,990068..990535,991391..991715,994645..994767,994861..995006)
location: region:967965-995006:1
so has part: feature:967965-968350:1:exon
so has part: feature:969183-969295:1:exon
so has part: feature:969457-969597:1:exon
so has part: feature:971086-971336:1:exon
so has part: feature:972139-972264:1:exon
so has part: feature:973592-973709:1:exon
so has part: feature:974148-974396:1:exon
so has part: feature:978833-978909:1:exon
so has part: feature:981392-981570:1:exon
so has part: feature:982107-982198:1:exon
so has part: feature:983479-983667:1:exon
so has part: feature:984345-984482:1:exon
so has part: feature:987755-987879:1:exon
so has part: feature:988818-988874:1:exon
so has part: feature:989369-989416:1:exon
so has part: feature:990068-990535:1:exon
so has part: feature:991391-991715:1:exon
so has part: feature:994645-994767:1:exon
so has part: feature:994861-995006:1:exon

XP_030395879.1
type: Protein
SIO_000068: ncbiprotein

position:967965:1
position: 967965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995006:1
position: 995006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967965-968350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:969183-969295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969457-969597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971086-971336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:972139-972264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:973592-973709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974148-974396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:978833-978909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:981392-981570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:982107-982198:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:983479-983667:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:984345-984482:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:987755-987879:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988818-988874:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:989369-989416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:990068-990535:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:991391-991715:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:994645-994767:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:994861-995006:1:exon

LOC115638469
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1007355..1025648)
location: region:1007355-1025648:-1
so has part: feature:1007355-1025648:-1:exon
subclass of: SO_0000010

115638469
type: Gene
SIO_000068: ncbigene

position:1007355:-1
position: 1007355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025648:-1
position: 1025648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007355-1025648:-1:exon

LOC115638469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638469
product: ectoderm-neural cortex protein 1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030540046.1
SIO_010081: LOC115638469
subclass of: SO_0000673
so part of: LOC115638469
location: complement(join(1007355..1010126,1011292..1013088,1021229..1021238,1025174..1025362,1025526..1025648))
location: region:1007355-1025648:-1
so has part: feature:1025526-1025648:-1:exon
so has part: feature:1025174-1025362:-1:exon
so has part: feature:1021229-1021238:-1:exon
so has part: feature:1011292-1013088:-1:exon
so has part: feature:1007355-1010126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1025526-1025648:-1:exon

position:1025526:-1
position: 1025526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1025174-1025362:-1:exon

position:1025174:-1
position: 1025174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025362:-1
position: 1025362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1021229-1021238:-1:exon

position:1021229:-1
position: 1021229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021238:-1
position: 1021238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1011292-1013088:-1:exon

position:1011292:-1
position: 1011292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013088:-1
position: 1013088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1007355-1010126:-1:exon

position:1010126:-1
position: 1010126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638469
product: ectoderm-neural cortex protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030540042.1
SIO_010081: LOC115638469
subclass of: SO_0000673
so part of: LOC115638469
location: complement(join(1007355..1010126,1011292..1013102,1014043..1014110))
location: region:1007355-1014110:-1
so has part: feature:1014043-1014110:-1:exon
so has part: feature:1011292-1013102:-1:exon
so has part: feature:1007355-1010126:-1:exon

position:1014110:-1
position: 1014110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1014043-1014110:-1:exon

position:1014043:-1
position: 1014043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1011292-1013102:-1:exon

position:1013102:-1
position: 1013102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1007355-1010126:-1:exon

LOC115638469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638469
product: ectoderm-neural cortex protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030540043.1
SIO_010081: LOC115638469
subclass of: SO_0000673
so part of: LOC115638469
location: complement(join(1007355..1010126,1011292..1013102,1013865..1013909))
location: region:1007355-1013909:-1
so has part: feature:1013865-1013909:-1:exon
so has part: feature:1011292-1013102:-1:exon
so has part: feature:1007355-1010126:-1:exon

position:1013909:-1
position: 1013909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013865-1013909:-1:exon

position:1013865:-1
position: 1013865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1011292-1013102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007355-1010126:-1:exon

LOC115638469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectoderm-neural cortex protein 1-like isoform X4
translation: MAAAADPVSSLVSVLESYRGRDRVIRTLCYGCQLAGGVLARKSPTESEMGRRLLAVSAQLSHCRTVLRLFDDLAMLAYSRQYGLGAKTGIVTMSVSSHENRKSRSSSGSMNIQLFHKPGHADSLLTQLNLLRRRHLFTDVVLRAGNQAFHCHRAVLASCSRYFDAMFSGGLKESKDAEVNFHNSLHPEVLELLLDYVYSARVLINEENAESLLEAGDMLQFQDVRDAAADFLEKNLHPANCLNMLLLSYAHCCERLLELSWRMALANFASLYQTDDFLRLPKAKLLELVESEELEVEDESLVYEAVIGWIRYDLPRRHEDLPELLCLVRLALLPESYLRNQVASEELVTSHKLGGEIVADAVRCKMKILQNDGLVTGFCAQPRKVSQALLLLGGQTFVCDKIYVVDRQTSEIIPRTDIPSPRKECSACALGCKVYVTGGKGSENGASKDVWVYDTLHDEWAKAAPMLVARFGHGSAELDHCLYVVGGHTAVSGSFPASPSVSLKQVEHYDPQLDKWSLVAPLREGVSNAAVVGAKMKLFVFGGTSVNQEKLPKVQCFDPGQNRWTVPASCPQPWRYTAAAVVGNHVIVIGGDTEFSASSAYRFHSDTYQWSKFGDVTAKRISCRAVTSGNRLYVVGGYCGAQRCKTLDCYDPSSDTWSSVTTVPYSLIPTAFVSTWKYLSA
SIO_010081: LOC115638469
subclass of: SO_0000673
so part of: LOC115638469
location: complement(join(1011314..1013088,1021229..1021238,1025174..1025362,1025526..1025597))
location: region:1011314-1025597:-1
so has part: feature:1025526-1025597:-1:exon
so has part: feature:1025174-1025362:-1:exon
so has part: feature:1021229-1021238:-1:exon
so has part: feature:1011314-1013088:-1:exon

XP_030395906.1
type: Protein
SIO_000068: ncbiprotein

position:1011314:-1
position: 1011314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025597:-1
position: 1025597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025526-1025597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025174-1025362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1021229-1021238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1011314-1013088:-1:exon

LOC115638469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectoderm-neural cortex protein 1-like isoform X1
translation: MSVSSHENRKSRSSSGSMNIQLFHKPGHADSLLTQLNLLRRRHLFTDVVLRAGNQAFHCHRAVLASCSRYFDAMFSGGLKESKDAEVNFHNSLHPEVLELLLDYVYSARVLINEENAESLLEAGDMLQFQDVRDAAADFLEKNLHPANCLNMLLLSYAHCCERLLELSWRMALANFASLYQTDDFLRLPKAKLLELVESEELEVEDESLVYEAVIGWIRYDLPRRHEDLPELLCLVRLALLPESYLRNQVASEELVTSHKLGGEIVADAVRCKMKILQNDGLVTGFCAQPRKVSQALLLLGGQTFVCDKIYVVDRQTSEIIPRTDIPSPRKECSACALGCKVYVTGGKGSENGASKDVWVYDTLHDEWAKAAPMLVARFGHGSAELDHCLYVVGGHTAVSGSFPASPSVSLKQVEHYDPQLDKWSLVAPLREGVSNAAVVGAKMKLFVFGGTSVNQEKLPKVQCFDPGQNRWTVPASCPQPWRYTAAAVVGNHVIVIGGDTEFSASSAYRFHSDTYQWSKFGDVTAKRISCRAVTSGNRLYVVGGYCGAQRCKTLDCYDPSSDTWSSVTTVPYSLIPTAFVSTWKYLSA
SIO_010081: LOC115638469
subclass of: SO_0000673
so part of: LOC115638469
location: complement(1011314..1013083)
location: region:1011314-1013083:-1
so has part: feature:1011314-1013083:-1:exon

XP_030395902.1
type: Protein
SIO_000068: ncbiprotein

position:1013083:-1
position: 1013083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011314-1013083:-1:exon

LOC115638469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectoderm-neural cortex protein 1-like isoform X1
translation: MSVSSHENRKSRSSSGSMNIQLFHKPGHADSLLTQLNLLRRRHLFTDVVLRAGNQAFHCHRAVLASCSRYFDAMFSGGLKESKDAEVNFHNSLHPEVLELLLDYVYSARVLINEENAESLLEAGDMLQFQDVRDAAADFLEKNLHPANCLNMLLLSYAHCCERLLELSWRMALANFASLYQTDDFLRLPKAKLLELVESEELEVEDESLVYEAVIGWIRYDLPRRHEDLPELLCLVRLALLPESYLRNQVASEELVTSHKLGGEIVADAVRCKMKILQNDGLVTGFCAQPRKVSQALLLLGGQTFVCDKIYVVDRQTSEIIPRTDIPSPRKECSACALGCKVYVTGGKGSENGASKDVWVYDTLHDEWAKAAPMLVARFGHGSAELDHCLYVVGGHTAVSGSFPASPSVSLKQVEHYDPQLDKWSLVAPLREGVSNAAVVGAKMKLFVFGGTSVNQEKLPKVQCFDPGQNRWTVPASCPQPWRYTAAAVVGNHVIVIGGDTEFSASSAYRFHSDTYQWSKFGDVTAKRISCRAVTSGNRLYVVGGYCGAQRCKTLDCYDPSSDTWSSVTTVPYSLIPTAFVSTWKYLSA
SIO_010081: LOC115638469
subclass of: SO_0000673
so part of: LOC115638469
location: complement(1011314..1013083)
location: region:1011314-1013083:-1
so has part: feature:1011314-1013083:-1:exon

XP_030395903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1011314-1013083:-1:exon

LOC115638469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638469
product: ectoderm-neural cortex protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_030540044.1
SIO_010081: LOC115638469
subclass of: SO_0000673
so part of: LOC115638469
location: complement(join(1017883..1019473,1020390..1020440,1023364..1023542,1025174..1025362,1025526..1025646))
location: region:1017883-1025646:-1
so has part: feature:1025526-1025646:-1:exon
so has part: feature:1025174-1025362:-1:exon
so has part: feature:1023364-1023542:-1:exon
so has part: feature:1020390-1020440:-1:exon
so has part: feature:1017883-1019473:-1:exon

position:1017883:-1
position: 1017883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025646:-1
position: 1025646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025526-1025646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025174-1025362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023364-1023542:-1:exon

position:1023364:-1
position: 1023364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023542:-1
position: 1023542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1020390-1020440:-1:exon

position:1020390:-1
position: 1020390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020440:-1
position: 1020440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1017883-1019473:-1:exon

position:1019473:-1
position: 1019473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638469
product: ectoderm-neural cortex protein 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030540045.1
SIO_010081: LOC115638469
subclass of: SO_0000673
so part of: LOC115638469
location: complement(join(1017883..1019473,1020390..1020440,1023364..1023542,1025174..1025362,1025577..1025629))
location: region:1017883-1025629:-1
so has part: feature:1025577-1025629:-1:exon
so has part: feature:1025174-1025362:-1:exon
so has part: feature:1023364-1023542:-1:exon
so has part: feature:1020390-1020440:-1:exon
so has part: feature:1017883-1019473:-1:exon

position:1025629:-1
position: 1025629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025577-1025629:-1:exon

position:1025577:-1
position: 1025577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1025174-1025362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023364-1023542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1020390-1020440:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1017883-1019473:-1:exon

LOC115638469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal membrane protein 11C-like isoform X3
translation: MAAAADPIRTLCYGCQLAGGVLARKSPTESEMGRRLLAVSAQLSHCRTVLRLFDDLAMLAYSRQYGLGAKEEDTIVRWLSVLNNLADQLYYPCEHVAWAADADVIRTNSHKWWTLSTAFWGLSLVLGIVRSLRILFQLRRKLRNRTGESLEQSQKEIDAQVKSEVLSILSSMADLSNAVHWLPPGFLWAGQFPPWLVGLMGTISSLIGVYQTSVGAGSGAV
SIO_010081: LOC115638469
subclass of: SO_0000673
so part of: LOC115638469
location: complement(join(1019248..1019473,1020390..1020440,1023364..1023542,1025174..1025362,1025577..1025597))
location: region:1019248-1025597:-1
so has part: feature:1025577-1025597:-1:exon
so has part: feature:1025174-1025362:-1:exon
so has part: feature:1023364-1023542:-1:exon
so has part: feature:1020390-1020440:-1:exon
so has part: feature:1019248-1019473:-1:exon

XP_030395905.1
type: Protein
SIO_000068: ncbiprotein

position:1019248:-1
position: 1019248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025577-1025597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025174-1025362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023364-1023542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1020390-1020440:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1019248-1019473:-1:exon

LOC115638469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal membrane protein 11C-like isoform X2
translation: MAAAADPVSSLVSVLESYRGRDRVIRTLCYGCQLAGGVLARKSPTESEMGRRLLAVSAQLSHCRTVLRLFDDLAMLAYSRQYGLGAKEEDTIVRWLSVLNNLADQLYYPCEHVAWAADADVIRTNSHKWWTLSTAFWGLSLVLGIVRSLRILFQLRRKLRNRTGESLEQSQKEIDAQVKSEVLSILSSMADLSNAVHWLPPGFLWAGQFPPWLVGLMGTISSLIGVYQTSVGAGSGAV
SIO_010081: LOC115638469
subclass of: SO_0000673
so part of: LOC115638469
location: complement(join(1019248..1019473,1020390..1020440,1023364..1023542,1025174..1025362,1025526..1025597))
location: region:1019248-1025597:-1
so has part: feature:1025526-1025597:-1:exon
so has part: feature:1025174-1025362:-1:exon
so has part: feature:1023364-1023542:-1:exon
so has part: feature:1020390-1020440:-1:exon
so has part: feature:1019248-1019473:-1:exon

XP_030395904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1025526-1025597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025174-1025362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023364-1023542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1020390-1020440:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1019248-1019473:-1:exon

TEX45
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: TEX45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1025873..1042735
location: region:1025873-1042735:1
so has part: feature:1025873-1042735:1:exon
subclass of: SO_0000010

115638470
type: Gene
SIO_000068: ncbigene

position:1025873:1
position: 1025873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042735:1
position: 1042735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025873-1042735:1:exon

TEX45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TEX45
product: testis expressed 45, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540049.1
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1025873..1026254,1028713..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037010..1037098,1037633..1037899)
location: region:1025873-1037899:1
so has part: feature:1025873-1026254:1:exon
so has part: feature:1028713-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037010-1037098:1:exon
so has part: feature:1037633-1037899:1:exon

position:1037899:1
position: 1037899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025873-1026254:1:exon

position:1026254:1
position: 1026254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028713-1029262:1:exon

position:1028713:1
position: 1028713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029262:1
position: 1029262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030415-1030518:1:exon

position:1030415:1
position: 1030415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030518:1
position: 1030518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1031386-1031480:1:exon

position:1031386:1
position: 1031386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031480:1
position: 1031480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1031613-1031728:1:exon

position:1031613:1
position: 1031613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031728:1
position: 1031728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1033495-1033613:1:exon

position:1033495:1
position: 1033495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033613:1
position: 1033613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1034156-1034357:1:exon

position:1034156:1
position: 1034156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034357:1
position: 1034357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1037010-1037098:1:exon

position:1037010:1
position: 1037010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037098:1
position: 1037098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1037633-1037899:1:exon

position:1037633:1
position: 1037633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TEX45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TEX45
product: testis expressed 45, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540051.1
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1025873..1026236,1028713..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037010..1037098,1037633..1037899)
location: region:1025873-1037899:1
so has part: feature:1025873-1026236:1:exon
so has part: feature:1028713-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037010-1037098:1:exon
so has part: feature:1037633-1037899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1025873-1026236:1:exon

position:1026236:1
position: 1026236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028713-1029262:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037010-1037098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1037633-1037899:1:exon

TEX45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TEX45
product: testis expressed 45, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540052.1
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1028438..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037010..1037098,1040600..1042735)
location: region:1028438-1042735:1
so has part: feature:1028438-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037010-1037098:1:exon
so has part: feature:1040600-1042735:1:exon

position:1028438:1
position: 1028438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028438-1029262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037010-1037098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1040600-1042735:1:exon

position:1040600:1
position: 1040600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TEX45
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1825980
gene: TEX45
product: testis expressed 45, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003997445.1
SIO_010081: TEX45
so part of: TEX45
location: join(1028438..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037010..1037098,1037633..1037885,1040600..1040661)
location: region:1028438-1040661:1
so has part: feature:1028438-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037010-1037098:1:exon
so has part: feature:1037633-1037885:1:exon
so has part: feature:1040600-1040661:1:exon

position:1040661:1
position: 1040661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028438-1029262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037010-1037098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037633-1037885:1:exon

position:1037885:1
position: 1037885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1040600-1040661:1:exon

TEX45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TEX45
product: testis expressed 45, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030540047.1
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1028438..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037010..1037098,1037633..1037899)
location: region:1028438-1037899:1
so has part: feature:1028438-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037010-1037098:1:exon
so has part: feature:1037633-1037899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1028438-1029262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037010-1037098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037633-1037899:1:exon

TEX45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TEX45
product: testis expressed 45, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030540048.1
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1028438..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037013..1037098,1037633..1037899)
location: region:1028438-1037899:1
so has part: feature:1028438-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037013-1037098:1:exon
so has part: feature:1037633-1037899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1028438-1029262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037013-1037098:1:exon

position:1037013:1
position: 1037013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1037633-1037899:1:exon

TEX45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: TEX45
product: testis expressed 45, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030540053.1
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1028438..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037010..1037365)
location: region:1028438-1037365:1
so has part: feature:1028438-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037010-1037365:1:exon

position:1037365:1
position: 1037365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028438-1029262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037010-1037365:1:exon

TEX45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TEX45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 45 isoform X4
translation: MSLPLQGKMAATGQSLIPAPLTGIPFLKASHFQIGFDHRPQGNVVESPFRTDFPPLWGSYKPDPILLPNSKGVLNQDMDKTRETWSETHLAFPVRSLEPKPKICPPESHLQMHADSQTKIFTSTARESYPWPDVTLQGPASTRAYYNKEEDHFPCGDKDKLKLLPSVYRFSYPAYEILEPIARAPSVHLGGIPSIKGDRCSYYGTSYQAQFEGGWIPPVTSCGKSKSSIVFGDPRSSVSTSEEKHAYTLQDTRNDRVYDKEHAVFQIHKTNIKPGDGCTRFFTVAQELFPRRELAPVKVTCLSKQTSSIPKGDEDLGRSRELASTTTSRFFHTQIDLGERPSQPDVPPWRLQSKVSLGDKHLNACFSSTTQHSDYQPPPYSQREVSSSKSHLKSHMPFNYPTGEGAVTTTQAMLVPHRQWMVRPSEELLQQEQVMGTHTTENKHWENSPKLQGDSLCQNHRNH
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1028695..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037010..1037098,1040600..1040698)
location: region:1028695-1040698:1
so has part: feature:1028695-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037010-1037098:1:exon
so has part: feature:1040600-1040698:1:exon

XP_030395912.1
type: Protein
SIO_000068: ncbiprotein

position:1028695:1
position: 1028695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040698:1
position: 1040698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028695-1029262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037010-1037098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1040600-1040698:1:exon

TEX45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TEX45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 45 isoform X1
translation: MSLPLQGKMAATGQSLIPAPLTGIPFLKASHFQIGFDHRPQGNVVESPFRTDFPPLWGSYKPDPILLPNSKGVLNQDMDKTRETWSETHLAFPVRSLEPKPKICPPESHLQMHADSQTKIFTSTARESYPWPDVTLQGPASTRAYYNKEEDHFPCGDKDKLKLLPSVYRFSYPAYEILEPIARAPSVHLGGIPSIKGDRCSYYGTSYQAQFEGGWIPPVTSCGKSKSSIVFGDPRSSVSTSEEKHAYTLQDTRNDRVYDKEHAVFQIHKTNIKPGDGCTRFFTVAQELFPRRELAPVKVTCLSKQTSSIPKGDEDLGRSRELASTTTSRFFHTQIDLGERPSQPDVPPWRLQSKVSLGDKHLNACFSSTTQHSDYQPPPYSQREVSSSKSHLKSHMPFNYPTGEGAVTTTQAMLVPHRQWMVRPSEELLQQIKYSHLVPPWQGQRFFGTEHHDEFTPKYSGPVTICGGNFQVSSIPLGTLKKYCPQRQMVFAT
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1028695..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037010..1037098,1037633..1037821)
location: region:1028695-1037821:1
so has part: feature:1028695-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037010-1037098:1:exon
so has part: feature:1037633-1037821:1:exon

XP_030395907.1
type: Protein
SIO_000068: ncbiprotein

position:1037821:1
position: 1037821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028695-1029262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037010-1037098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037633-1037821:1:exon

TEX45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TEX45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 45 isoform X2
translation: MSLPLQGKMAATGQSLIPAPLTGIPFLKASHFQIGFDHRPQGNVVESPFRTDFPPLWGSYKPDPILLPNSKGVLNQDMDKTRETWSETHLAFPVRSLEPKPKICPPESHLQMHADSQTKIFTSTARESYPWPDVTLQGPASTRAYYNKEEDHFPCGDKDKLKLLPSVYRFSYPAYEILEPIARAPSVHLGGIPSIKGDRCSYYGTSYQAQFEGGWIPPVTSCGKSKSSIVFGDPRSSVSTSEEKHAYTLQDTRNDRVYDKEHAVFQIHKTNIKPGDGCTRFFTVAQELFPRRELAPVKVTCLSKQTSSIPKGDEDLGRSRELASTTTSRFFHTQIDLGERPSQPDVPPWRLQSKVSLGDKHLNACFSSTTQHSDYQPPPYSQREVSSSKSHLKSHMPFNYPSEGAVTTTQAMLVPHRQWMVRPSEELLQQIKYSHLVPPWQGQRFFGTEHHDEFTPKYSGPVTICGGNFQVSSIPLGTLKKYCPQRQMVFAT
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1028695..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037013..1037098,1037633..1037821)
location: region:1028695-1037821:1
so has part: feature:1028695-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037013-1037098:1:exon
so has part: feature:1037633-1037821:1:exon

XP_030395908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1028695-1029262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037013-1037098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037633-1037821:1:exon

TEX45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TEX45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 45 isoform X5
translation: MSLPLQGKMAATGQSLIPAPLTGIPFLKASHFQIGFDHRPQGNVVESPFRTDFPPLWGSYKPDPILLPNSKGVLNQDMDKTRETWSETHLAFPVRSLEPKPKICPPESHLQMHADSQTKIFTSTARESYPWPDVTLQGPASTRAYYNKEEDHFPCGDKDKLKLLPSVYRFSYPAYEILEPIARAPSVHLGGIPSIKGDRCSYYGTSYQAQFEGGWIPPVTSCGKSKSSIVFGDPRSSVSTSEEKHAYTLQDTRNDRVYDKEHAVFQIHKTNIKPGDGCTRFFTVAQELFPRRELAPVKVTCLSKQTSSIPKGDEDLGRSRELASTTTSRFFHTQIDLGERPSQPDVPPWRLQSKVSLGDKHLNACFSSTTQHSDYQPPPYSQREVSSSKSHLKSHMPFNYPTGEGAVTTTQAMLVPHRQWMVRPSEELLQQVWQ
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1028695..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037010..1037110)
location: region:1028695-1037110:1
so has part: feature:1028695-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037010-1037110:1:exon

XP_030395913.1
type: Protein
SIO_000068: ncbiprotein

position:1037110:1
position: 1037110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028695-1029262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037010-1037110:1:exon

TEX45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TEX45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 45 isoform X3
translation: MAATGQSLIPAPLTGIPFLKASHFQIGFDHRPQGNVVESPFRTDFPPLWGSYKPDPILLPNSKGVLNQDMDKTRETWSETHLAFPVRSLEPKPKICPPESHLQMHADSQTKIFTSTARESYPWPDVTLQGPASTRAYYNKEEDHFPCGDKDKLKLLPSVYRFSYPAYEILEPIARAPSVHLGGIPSIKGDRCSYYGTSYQAQFEGGWIPPVTSCGKSKSSIVFGDPRSSVSTSEEKHAYTLQDTRNDRVYDKEHAVFQIHKTNIKPGDGCTRFFTVAQELFPRRELAPVKVTCLSKQTSSIPKGDEDLGRSRELASTTTSRFFHTQIDLGERPSQPDVPPWRLQSKVSLGDKHLNACFSSTTQHSDYQPPPYSQREVSSSKSHLKSHMPFNYPTGEGAVTTTQAMLVPHRQWMVRPSEELLQQIKYSHLVPPWQGQRFFGTEHHDEFTPKYSGPVTICGGNFQVSSIPLGTLKKYCPQRQMVFAT
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1028719..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037010..1037098,1037633..1037821)
location: region:1028719-1037821:1
so has part: feature:1028719-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037010-1037098:1:exon
so has part: feature:1037633-1037821:1:exon

XP_030395909.1
type: Protein
SIO_000068: ncbiprotein

position:1028719:1
position: 1028719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028719-1029262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037010-1037098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037633-1037821:1:exon

TEX45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: TEX45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 45 isoform X3
translation: MAATGQSLIPAPLTGIPFLKASHFQIGFDHRPQGNVVESPFRTDFPPLWGSYKPDPILLPNSKGVLNQDMDKTRETWSETHLAFPVRSLEPKPKICPPESHLQMHADSQTKIFTSTARESYPWPDVTLQGPASTRAYYNKEEDHFPCGDKDKLKLLPSVYRFSYPAYEILEPIARAPSVHLGGIPSIKGDRCSYYGTSYQAQFEGGWIPPVTSCGKSKSSIVFGDPRSSVSTSEEKHAYTLQDTRNDRVYDKEHAVFQIHKTNIKPGDGCTRFFTVAQELFPRRELAPVKVTCLSKQTSSIPKGDEDLGRSRELASTTTSRFFHTQIDLGERPSQPDVPPWRLQSKVSLGDKHLNACFSSTTQHSDYQPPPYSQREVSSSKSHLKSHMPFNYPTGEGAVTTTQAMLVPHRQWMVRPSEELLQQIKYSHLVPPWQGQRFFGTEHHDEFTPKYSGPVTICGGNFQVSSIPLGTLKKYCPQRQMVFAT
SIO_010081: TEX45
subclass of: SO_0000673
so part of: TEX45
location: join(1028719..1029262,1030415..1030518,1031386..1031480,1031613..1031728,1033495..1033613,1034156..1034357,1037010..1037098,1037633..1037821)
location: region:1028719-1037821:1
so has part: feature:1028719-1029262:1:exon
so has part: feature:1030415-1030518:1:exon
so has part: feature:1031386-1031480:1:exon
so has part: feature:1031613-1031728:1:exon
so has part: feature:1033495-1033613:1:exon
so has part: feature:1034156-1034357:1:exon
so has part: feature:1037010-1037098:1:exon
so has part: feature:1037633-1037821:1:exon

XP_030395911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1028719-1029262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030415-1030518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031386-1031480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031613-1031728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033495-1033613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034156-1034357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037010-1037098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037633-1037821:1:exon

ARRDC2
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: ARRDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1044400..1064255
location: region:1044400-1064255:1
so has part: feature:1044400-1064255:1:exon
subclass of: SO_0000010

115638465
type: Gene
SIO_000068: ncbigene

position:1044400:1
position: 1044400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064255:1
position: 1064255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044400-1064255:1:exon

ARRDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: ARRDC2
product: arrestin domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030540024.1
SIO_010081: ARRDC2
subclass of: SO_0000673
so part of: ARRDC2
location: join(1044400..1044728,1059573..1059639,1059854..1060001,1060739..1060841,1061180..1061436,1061920..1062082,1062346..1062497,1062594..1064255)
location: region:1044400-1064255:1
so has part: feature:1044400-1044728:1:exon
so has part: feature:1059573-1059639:1:exon
so has part: feature:1059854-1060001:1:exon
so has part: feature:1060739-1060841:1:exon
so has part: feature:1061180-1061436:1:exon
so has part: feature:1061920-1062082:1:exon
so has part: feature:1062346-1062497:1:exon
so has part: feature:1062594-1064255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1044400-1044728:1:exon

position:1044728:1
position: 1044728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059573-1059639:1:exon

position:1059573:1
position: 1059573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059639:1
position: 1059639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1059854-1060001:1:exon

position:1059854:1
position: 1059854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060001:1
position: 1060001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1060739-1060841:1:exon

position:1060739:1
position: 1060739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060841:1
position: 1060841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1061180-1061436:1:exon

position:1061180:1
position: 1061180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061436:1
position: 1061436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1061920-1062082:1:exon

position:1061920:1
position: 1061920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062082:1
position: 1062082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1062346-1062497:1:exon

position:1062346:1
position: 1062346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062497:1
position: 1062497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1062594-1064255:1:exon

position:1062594:1
position: 1062594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARRDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: ARRDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arrestin domain-containing protein 2 isoform X2
translation: MQHLGKIRSFALELAAGPAQGAYRGGELLSGQVVLELRAPLRVRALQVCARGLATAHWLESRSVGMNTVYSDYSAYEPYLRARCQLLRDNGEVTVLQAGKHEFPFTFQLPETLATSFEGRHGNVRYWVKAKLHRPWSVVKKAKREFTVIEPIDINTPALLAPQAGVKEKLARAWYCNRGQVSVSAKIDRKGYTPGEVIPIFAEIDNCSTRTIVPKAAIIQTQTFIARGAKKQKKSVVASIAGDSIAAGKREVWHGRALKIPPVGPSILQCRIIRVEYALKVCVDIPGTSKLLLELPLVIGTIPLHPFGSRTSSVSSQYSVNLDWLRMVILEEPEAPPEYSSVVSSEESAQNLSAPCEDELSTSLGGPFFAYIQEFRYRPPPLYSEVDPNPTSDGIRPRCMTC
SIO_010081: ARRDC2
subclass of: SO_0000673
so part of: ARRDC2
location: join(1044464..1044728,1059573..1059639,1059854..1060001,1060739..1060841,1061180..1061436,1061920..1062082,1062346..1062497,1062594..1062647)
location: region:1044464-1062647:1
so has part: feature:1044464-1044728:1:exon
so has part: feature:1059573-1059639:1:exon
so has part: feature:1059854-1060001:1:exon
so has part: feature:1060739-1060841:1:exon
so has part: feature:1061180-1061436:1:exon
so has part: feature:1061920-1062082:1:exon
so has part: feature:1062346-1062497:1:exon
so has part: feature:1062594-1062647:1:exon

XP_030395884.1
type: Protein
SIO_000068: ncbiprotein

position:1044464:1
position: 1044464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062647:1
position: 1062647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044464-1044728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059573-1059639:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059854-1060001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060739-1060841:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061180-1061436:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061920-1062082:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1062346-1062497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1062594-1062647:1:exon

ARRDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: ARRDC2
product: arrestin domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030540023.1
SIO_010081: ARRDC2
subclass of: SO_0000673
so part of: ARRDC2
location: join(1058310..1058601,1059573..1059639,1059854..1060001,1060739..1060841,1061180..1061436,1061920..1062082,1062346..1062497,1062594..1064255)
location: region:1058310-1064255:1
so has part: feature:1058310-1058601:1:exon
so has part: feature:1059573-1059639:1:exon
so has part: feature:1059854-1060001:1:exon
so has part: feature:1060739-1060841:1:exon
so has part: feature:1061180-1061436:1:exon
so has part: feature:1061920-1062082:1:exon
so has part: feature:1062346-1062497:1:exon
so has part: feature:1062594-1064255:1:exon

position:1058310:1
position: 1058310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058310-1058601:1:exon

position:1058601:1
position: 1058601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059573-1059639:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059854-1060001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060739-1060841:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061180-1061436:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061920-1062082:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1062346-1062497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1062594-1064255:1:exon

ARRDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: ARRDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arrestin domain-containing protein 2 isoform X1
translation: MLFDRLRHFCVLLDCPELDSPPVFSPGEAVSGRVVLELSGEARLGALQLHAQGCAKVHWTESRSAGSSTAYTQSYSDQVPFLSHRDTLLAAPDNGEVTVLQAGKHEFPFTFQLPETLATSFEGRHGNVRYWVKAKLHRPWSVVKKAKREFTVIEPIDINTPALLAPQAGVKEKLARAWYCNRGQVSVSAKIDRKGYTPGEVIPIFAEIDNCSTRTIVPKAAIIQTQTFIARGAKKQKKSVVASIAGDSIAAGKREVWHGRALKIPPVGPSILQCRIIRVEYALKVCVDIPGTSKLLLELPLVIGTIPLHPFGSRTSSVSSQYSVNLDWLRMVILEEPEAPPEYSSVVSSEESAQNLSAPCEDELSTSLGGPFFAYIQEFRYRPPPLYSEVDPNPTSDGIRPRCMTC
SIO_010081: ARRDC2
subclass of: SO_0000673
so part of: ARRDC2
location: join(1058325..1058601,1059573..1059639,1059854..1060001,1060739..1060841,1061180..1061436,1061920..1062082,1062346..1062497,1062594..1062647)
location: region:1058325-1062647:1
so has part: feature:1058325-1058601:1:exon
so has part: feature:1059573-1059639:1:exon
so has part: feature:1059854-1060001:1:exon
so has part: feature:1060739-1060841:1:exon
so has part: feature:1061180-1061436:1:exon
so has part: feature:1061920-1062082:1:exon
so has part: feature:1062346-1062497:1:exon
so has part: feature:1062594-1062647:1:exon

XP_030395883.1
type: Protein
SIO_000068: ncbiprotein

position:1058325:1
position: 1058325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058325-1058601:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059573-1059639:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059854-1060001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060739-1060841:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061180-1061436:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061920-1062082:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1062346-1062497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1062594-1062647:1:exon

LOC115638680
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1090209..1092258)
location: region:1090209-1092258:-1
so has part: feature:1090209-1092258:-1:exon
subclass of: SO_0000011

115638680
type: Gene
SIO_000068: ncbigene

position:1090209:-1
position: 1090209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092258:-1
position: 1092258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090209-1092258:-1:exon

LOC115638680
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638680
product: uncharacterized LOC115638680
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003997500.1
SIO_010081: LOC115638680
subclass of: SO_0000673
so part of: LOC115638680
location: complement(join(1090209..1090437,1091591..1092026,1092168..1092258))
location: region:1090209-1092258:-1
so has part: feature:1092168-1092258:-1:exon
so has part: feature:1091591-1092026:-1:exon
so has part: feature:1090209-1090437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1092168-1092258:-1:exon

position:1092168:-1
position: 1092168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1091591-1092026:-1:exon

position:1091591:-1
position: 1091591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092026:-1
position: 1092026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1090209-1090437:-1:exon

position:1090437:-1
position: 1090437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL12RB1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: IL12RB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1128898..1145187)
location: region:1128898-1145187:-1
so has part: feature:1128898-1145187:-1:exon
subclass of: SO_0000010

115638752
type: Gene
SIO_000068: ncbigene

position:1128898:-1
position: 1128898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145187:-1
position: 1145187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1128898-1145187:-1:exon

IL12RB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: IL12RB1
product: interleukin 12 receptor subunit beta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540713.1
SIO_010081: IL12RB1
subclass of: SO_0000673
so part of: IL12RB1
location: complement(join(1128898..1129864,1130499..1130580,1130673..1130769,1132156..1132299,1132694..1132840,1134031..1134129,1134666..1134839,1135282..1135498,1135915..1135988,1136168..1136278,1137054..1137099,1138799..1138956,1139530..1139699,1140679..1140793,1144880..1145187))
location: region:1128898-1145187:-1
so has part: feature:1144880-1145187:-1:exon
so has part: feature:1140679-1140793:-1:exon
so has part: feature:1139530-1139699:-1:exon
so has part: feature:1138799-1138956:-1:exon
so has part: feature:1137054-1137099:-1:exon
so has part: feature:1136168-1136278:-1:exon
so has part: feature:1135915-1135988:-1:exon
so has part: feature:1135282-1135498:-1:exon
so has part: feature:1134666-1134839:-1:exon
so has part: feature:1134031-1134129:-1:exon
so has part: feature:1132694-1132840:-1:exon
so has part: feature:1132156-1132299:-1:exon
so has part: feature:1130673-1130769:-1:exon
so has part: feature:1130499-1130580:-1:exon
so has part: feature:1128898-1129864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1144880-1145187:-1:exon

position:1144880:-1
position: 1144880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1140679-1140793:-1:exon

position:1140679:-1
position: 1140679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140793:-1
position: 1140793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1139530-1139699:-1:exon

position:1139530:-1
position: 1139530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139699:-1
position: 1139699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1138799-1138956:-1:exon

position:1138799:-1
position: 1138799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138956:-1
position: 1138956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1137054-1137099:-1:exon

position:1137054:-1
position: 1137054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137099:-1
position: 1137099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1136168-1136278:-1:exon

position:1136168:-1
position: 1136168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136278:-1
position: 1136278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1135915-1135988:-1:exon

position:1135915:-1
position: 1135915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135988:-1
position: 1135988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1135282-1135498:-1:exon

position:1135282:-1
position: 1135282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135498:-1
position: 1135498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1134666-1134839:-1:exon

position:1134666:-1
position: 1134666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134839:-1
position: 1134839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1134031-1134129:-1:exon

position:1134031:-1
position: 1134031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134129:-1
position: 1134129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1132694-1132840:-1:exon

position:1132694:-1
position: 1132694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132840:-1
position: 1132840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1132156-1132299:-1:exon

position:1132156:-1
position: 1132156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132299:-1
position: 1132299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1130673-1130769:-1:exon

position:1130673:-1
position: 1130673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130769:-1
position: 1130769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1130499-1130580:-1:exon

position:1130499:-1
position: 1130499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130580:-1
position: 1130580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1128898-1129864:-1:exon

position:1129864:-1
position: 1129864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL12RB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: IL12RB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-12 receptor subunit beta-1
translation: MMSWLLLLAALALRGSAEDPDLVCYRNCMQCNFICTWRAKTTSGNATYILKFCYHRTYSCKEFKMASSTHYRFSYRTWPVLENLTAWVESHSGGRVERTQNITLQLENAIKLDPLPPDQITFSKSNGTLRLTLQQLDNWIVTYEPLRREARYRQMKGTKWTQVACQTQGEYKGNNITVICNLGTTTACEVQIRHKMAHWSTYWSDWSKSIFVPEEIPEVNYTVGRLGRNGQRNVTFHWQEAREEQWKVYYTLALYMPACRCTELKKEVPEKDETTLTLALSGAEYHLSMSASNPAGRGPVRTYRIPPEHRTEMSFLNVSSAGSSVTVQWAAKTNGTFYCIEKQPLEDPQEDHKECIHKQLFEKDSYMDTGTVKPRKCYRIAIHGGGPEKHWTFGSMYHFATNTSLDGPIHIRNITANSAFLLWKPSLLSQCPGMLKKYIICYTSEQDNGMAYHEVNSSATHYTLQDLQPSTSYRVGIQAATADRDGSCSPRHLFSTMKLGPNPAEWKLNLRYLSIFLGVPVLAVFYHFLKKRAKKMLFPPLPNPMDSEAIKFPAEEISQVKPRPGFVEPSEKISPTGPLVTKFISDKGEPDMNTETHSLHLYTVTEETAEMLQAKEGQAGSENDLPFEYRRQVLLTPAEEEQEEEDFREFAGVCGQNNLAEAGTGPSQPHPDEGAAMEQTGLSRPLVQLSLLLSDKPVIIKNGGSFDLLHK
SIO_010081: IL12RB1
subclass of: SO_0000673
so part of: IL12RB1
location: complement(join(1129406..1129864,1130499..1130580,1130673..1130769,1132156..1132299,1132694..1132840,1134031..1134129,1134666..1134839,1135282..1135498,1135915..1135988,1136168..1136278,1137054..1137099,1138799..1138956,1139530..1139699,1140679..1140793,1144880..1144922))
location: region:1129406-1144922:-1
so has part: feature:1144880-1144922:-1:exon
so has part: feature:1140679-1140793:-1:exon
so has part: feature:1139530-1139699:-1:exon
so has part: feature:1138799-1138956:-1:exon
so has part: feature:1137054-1137099:-1:exon
so has part: feature:1136168-1136278:-1:exon
so has part: feature:1135915-1135988:-1:exon
so has part: feature:1135282-1135498:-1:exon
so has part: feature:1134666-1134839:-1:exon
so has part: feature:1134031-1134129:-1:exon
so has part: feature:1132694-1132840:-1:exon
so has part: feature:1132156-1132299:-1:exon
so has part: feature:1130673-1130769:-1:exon
so has part: feature:1130499-1130580:-1:exon
so has part: feature:1129406-1129864:-1:exon

XP_030396573.1
type: Protein
SIO_000068: ncbiprotein

position:1129406:-1
position: 1129406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144922:-1
position: 1144922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144880-1144922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140679-1140793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1139530-1139699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1138799-1138956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1137054-1137099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1136168-1136278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1135915-1135988:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1135282-1135498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1134666-1134839:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1134031-1134129:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1132694-1132840:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1132156-1132299:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1130673-1130769:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1130499-1130580:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1129406-1129864:-1:exon

MAST3
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: MAST3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1166943..1230601
location: region:1166943-1230601:1
so has part: feature:1166943-1230601:1:exon
subclass of: SO_0000010

115638543
type: Gene
SIO_000068: ncbigene

position:1166943:1
position: 1166943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230601:1
position: 1230601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166943-1230601:1:exon

MAST3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: MAST3
product: microtubule associated serine/threonine kinase 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030540252.1
SIO_010081: MAST3
subclass of: SO_0000673
so part of: MAST3
location: join(1166943..1167049,1168017..1168106,1197345..1197433,1198067..1198139,1201123..1201201,1202344..1202501,1204964..1205040,1206300..1206511,1206612..1206712,1207644..1207776,1209816..1209883,1210453..1210538,1211260..1211468,1212317..1212455,1212720..1212852,1213066..1213231,1214644..1214745,1215811..1215933,1217102..1217211,1217928..1218082,1218566..1218798,1219683..1219883,1220359..1220585,1220798..1220920,1222736..1222872,1223617..1223798,1224561..1230601)
location: region:1166943-1230601:1
so has part: feature:1166943-1167049:1:exon
so has part: feature:1168017-1168106:1:exon
so has part: feature:1197345-1197433:1:exon
so has part: feature:1198067-1198139:1:exon
so has part: feature:1201123-1201201:1:exon
so has part: feature:1202344-1202501:1:exon
so has part: feature:1204964-1205040:1:exon
so has part: feature:1206300-1206511:1:exon
so has part: feature:1206612-1206712:1:exon
so has part: feature:1207644-1207776:1:exon
so has part: feature:1209816-1209883:1:exon
so has part: feature:1210453-1210538:1:exon
so has part: feature:1211260-1211468:1:exon
so has part: feature:1212317-1212455:1:exon
so has part: feature:1212720-1212852:1:exon
so has part: feature:1213066-1213231:1:exon
so has part: feature:1214644-1214745:1:exon
so has part: feature:1215811-1215933:1:exon
so has part: feature:1217102-1217211:1:exon
so has part: feature:1217928-1218082:1:exon
so has part: feature:1218566-1218798:1:exon
so has part: feature:1219683-1219883:1:exon
so has part: feature:1220359-1220585:1:exon
so has part: feature:1220798-1220920:1:exon
so has part: feature:1222736-1222872:1:exon
so has part: feature:1223617-1223798:1:exon
so has part: feature:1224561-1230601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1166943-1167049:1:exon

position:1167049:1
position: 1167049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1168017-1168106:1:exon

position:1168017:1
position: 1168017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168106:1
position: 1168106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1197345-1197433:1:exon

position:1197345:1
position: 1197345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197433:1
position: 1197433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1198067-1198139:1:exon

position:1198067:1
position: 1198067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198139:1
position: 1198139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1201123-1201201:1:exon

position:1201123:1
position: 1201123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201201:1
position: 1201201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1202344-1202501:1:exon

position:1202344:1
position: 1202344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202501:1
position: 1202501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1204964-1205040:1:exon

position:1204964:1
position: 1204964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205040:1
position: 1205040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1206300-1206511:1:exon

position:1206300:1
position: 1206300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1206511:1
position: 1206511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1206612-1206712:1:exon

position:1206612:1
position: 1206612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1206712:1
position: 1206712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1207644-1207776:1:exon

position:1207644:1
position: 1207644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1207776:1
position: 1207776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1209816-1209883:1:exon

position:1209816:1
position: 1209816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209883:1
position: 1209883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1210453-1210538:1:exon

position:1210453:1
position: 1210453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1210538:1
position: 1210538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1211260-1211468:1:exon

position:1211260:1
position: 1211260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211468:1
position: 1211468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1212317-1212455:1:exon

position:1212317:1
position: 1212317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212455:1
position: 1212455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1212720-1212852:1:exon

position:1212720:1
position: 1212720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212852:1
position: 1212852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1213066-1213231:1:exon

position:1213066:1
position: 1213066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213231:1
position: 1213231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1214644-1214745:1:exon

position:1214644:1
position: 1214644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214745:1
position: 1214745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1215811-1215933:1:exon

position:1215811:1
position: 1215811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215933:1
position: 1215933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1217102-1217211:1:exon

position:1217102:1
position: 1217102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217211:1
position: 1217211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1217928-1218082:1:exon

position:1217928:1
position: 1217928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218082:1
position: 1218082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1218566-1218798:1:exon

position:1218566:1
position: 1218566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218798:1
position: 1218798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1219683-1219883:1:exon

position:1219683:1
position: 1219683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219883:1
position: 1219883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1220359-1220585:1:exon

position:1220359:1
position: 1220359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220585:1
position: 1220585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1220798-1220920:1:exon

position:1220798:1
position: 1220798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220920:1
position: 1220920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1222736-1222872:1:exon

position:1222736:1
position: 1222736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222872:1
position: 1222872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1223617-1223798:1:exon

position:1223617:1
position: 1223617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223798:1
position: 1223798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1224561-1230601:1:exon

position:1224561:1
position: 1224561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAST3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: MAST3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: microtubule-associated serine/threonine-protein kinase 3
translation: MKSRRDRLKIPSLTLDLSPSSQSPTLLSPCSPCSPCSPLLTLHPWSCRSSNRKSLVVGTPSPTLSRPLSPLSVPTAGSSPLDSPRNFSTSTSVNFPFARRADGRRWSLASLPSSGYGTNTPSSTVSSSSSSQERLHQLPYQPTLDELHFLSKHFRSTECVTDEEGRRSPCLRPRSRSLSPGRTSGAFDNEIVMMNHVYKERFPKATAHMEERLQGTITSCSSSSMCPLLIGVLGFIHHQIIELARDCLAKSQQALITTRYFMELQEKWRNCSYYAQERSESEEVRFIDQLVRKLLLIISRPXRLLECLEFDPEEFYHLLEAAEGHAKAGQGIKTDIPRYIISQLGLAKDPLEEMVQLDHFDSGNTMTPENDDSHESRASAATSRRKPCESDFETIKLISNGAYGAVYLVRHKETRQRFAIKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCAALLKNMGPLPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMNMTTNLYEGHIEKDTREFMDKQVCGTPEYIAPEVILIQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDEIMWPEGDEALPADAQDLITRLLRHCPLERLGTGGAHEVKHHSFFHNLDWNGLLRQKAEFIPQLEAEDDTSYFDTRSERYRHLGSEDEETNDEESSVEIGQFSSCSHRFSKVYSSSEYLAAHSNLSFSSSERSQSEEKEDRIERWDRSSGDEEKSRLSGTETRLRSWTSCGSTAYSSRHERSCSTATLTSTFSLETMPKFAFSSEDESPCPGSVKAERPMFVLGDPEAGAGGAAKSSALSADIVSLNHIRLRSNSTGTKSSTPRALEPGLGRRLGSRKNTPEKQSVSSGSRVPKSASVSALSLIITSDDCASGALMSPISPHSLSSNPSSRDSSPSRDSSLSITSLRPPIIIHSSGKKYGFTLRAIRVYMGDSDVYAVHHMVWSVEDGSPAQEAGLRAGDLITHVNGESVLGLVHMDVVELLLKSGKKVALRTTALENTSIKVGPARKNSSKTRMARRSKKSRKRDSQDRRKCLFKKISKQTTVLHTSRSFSSGLHHSLSSSESLPGSPTHSLSPGPTTPCRSPAPDLPLDSVSPQSTSPSSSTPTSPAGHIRPSSLHGLVPKLSGQRYKVGRRKSTSSIPPSPLACTPSSVPQPPSPQRSPSPLPSYTKNVHSFQGKTLSPPTIVRQVSRPRSAEGPRSPLLKRVQSAEKIATYIAEKKTISSRKLTLEMPPGDGTGEALGERETPVQVGELCAVAYPGTPRMRDWTGERHDRDQEVIVMRRLNLSERRDSFKKQEAVQEVSFDEPELVPVSEDGMKAEAKLNKERAPWRLAPHAASWVETRPSSAFGSSSEPPNPEQMPTVVPQIAVQGSESDEQETNTAEWECQGSYPIQLMARVYTEQMDGTTAVEYKSVSSQCRENREQRELCAGQEPSPASGSPHRTCCGKDMVGSSQLSKAPPRLKLWGSSAVQEHECTEAEMPGANQQKMHDQARKKVKDE
SIO_010081: MAST3
subclass of: SO_0000673
so part of: MAST3
location: join(1167003..1167049,1168017..1168106,1197345..1197433,1198067..1198139,1201123..1201201,1202344..1202501,1204964..1205040,1206300..1206511,1206612..1206712,1207644..1207776,1209816..1209883,1210453..1210538,1211260..1211468,1212317..1212455,1212720..1212852,1213066..1213231,1214644..1214745,1215811..1215933,1217102..1217211,1217928..1218082,1218566..1218798,1219683..1219883,1220359..1220585,1220798..1220920,1222736..1222872,1223617..1223798,1224561..1225789)
location: region:1167003-1225789:1
so has part: feature:1167003-1167049:1:exon
so has part: feature:1168017-1168106:1:exon
so has part: feature:1197345-1197433:1:exon
so has part: feature:1198067-1198139:1:exon
so has part: feature:1201123-1201201:1:exon
so has part: feature:1202344-1202501:1:exon
so has part: feature:1204964-1205040:1:exon
so has part: feature:1206300-1206511:1:exon
so has part: feature:1206612-1206712:1:exon
so has part: feature:1207644-1207776:1:exon
so has part: feature:1209816-1209883:1:exon
so has part: feature:1210453-1210538:1:exon
so has part: feature:1211260-1211468:1:exon
so has part: feature:1212317-1212455:1:exon
so has part: feature:1212720-1212852:1:exon
so has part: feature:1213066-1213231:1:exon
so has part: feature:1214644-1214745:1:exon
so has part: feature:1215811-1215933:1:exon
so has part: feature:1217102-1217211:1:exon
so has part: feature:1217928-1218082:1:exon
so has part: feature:1218566-1218798:1:exon
so has part: feature:1219683-1219883:1:exon
so has part: feature:1220359-1220585:1:exon
so has part: feature:1220798-1220920:1:exon
so has part: feature:1222736-1222872:1:exon
so has part: feature:1223617-1223798:1:exon
so has part: feature:1224561-1225789:1:exon

XP_030396112.1
type: Protein
SIO_000068: ncbiprotein

position:1167003:1
position: 1167003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225789:1
position: 1225789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167003-1167049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1168017-1168106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1197345-1197433:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198067-1198139:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1201123-1201201:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1202344-1202501:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204964-1205040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1206300-1206511:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1206612-1206712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1207644-1207776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1209816-1209883:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1210453-1210538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1211260-1211468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1212317-1212455:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1212720-1212852:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1213066-1213231:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1214644-1214745:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1215811-1215933:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1217102-1217211:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1217928-1218082:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1218566-1218798:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1219683-1219883:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1220359-1220585:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1220798-1220920:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1222736-1222872:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1223617-1223798:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1224561-1225789:1:exon

LOC115638544
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1230256..1239061)
location: region:1230256-1239061:-1
so has part: feature:1230256-1239061:-1:exon
subclass of: SO_0000011

115638544
type: Gene
SIO_000068: ncbigene

position:1230256:-1
position: 1230256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239061:-1
position: 1239061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230256-1239061:-1:exon

LOC115638544
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1825980
nc RNA class: lncRNA
gene: LOC115638544
product: uncharacterized LOC115638544
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003997475.1
SIO_010081: LOC115638544
subclass of: SO_0000673
so part of: LOC115638544
location: complement(join(1230256..1230896,1232783..1232852,1239033..1239061))
location: region:1230256-1239061:-1
so has part: feature:1239033-1239061:-1:exon
so has part: feature:1232783-1232852:-1:exon
so has part: feature:1230256-1230896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239033-1239061:-1:exon

position:1239033:-1
position: 1239033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1232783-1232852:-1:exon

position:1232783:-1
position: 1232783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232852:-1
position: 1232852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1230256-1230896:-1:exon

position:1230896:-1
position: 1230896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIK3R2
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: PIK3R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1240459..1276447
location: region:1240459-1276447:1
so has part: feature:1240459-1276447:1:exon
subclass of: SO_0000010

115638619
type: Gene
SIO_000068: ncbigene

position:1240459:1
position: 1240459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276447:1
position: 1276447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240459-1276447:1:exon

PIK3R2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PIK3R2
product: phosphoinositide-3-kinase regulatory subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030540451.1
SIO_010081: PIK3R2
subclass of: SO_0000673
so part of: PIK3R2
location: join(1240459..1240540,1257492..1258236,1266272..1266364,1267067..1267129,1268321..1268452,1268657..1268858,1269569..1269654,1270111..1270216,1270447..1270545,1271069..1271249,1272098..1272223,1273163..1273305,1273541..1273717,1274068..1274139,1274833..1275003,1275192..1276447)
location: region:1240459-1276447:1
so has part: feature:1240459-1240540:1:exon
so has part: feature:1257492-1258236:1:exon
so has part: feature:1266272-1266364:1:exon
so has part: feature:1267067-1267129:1:exon
so has part: feature:1268321-1268452:1:exon
so has part: feature:1268657-1268858:1:exon
so has part: feature:1269569-1269654:1:exon
so has part: feature:1270111-1270216:1:exon
so has part: feature:1270447-1270545:1:exon
so has part: feature:1271069-1271249:1:exon
so has part: feature:1272098-1272223:1:exon
so has part: feature:1273163-1273305:1:exon
so has part: feature:1273541-1273717:1:exon
so has part: feature:1274068-1274139:1:exon
so has part: feature:1274833-1275003:1:exon
so has part: feature:1275192-1276447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1240459-1240540:1:exon

position:1240540:1
position: 1240540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1257492-1258236:1:exon

position:1257492:1
position: 1257492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258236:1
position: 1258236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1266272-1266364:1:exon

position:1266272:1
position: 1266272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266364:1
position: 1266364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1267067-1267129:1:exon

position:1267067:1
position: 1267067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267129:1
position: 1267129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1268321-1268452:1:exon

position:1268321:1
position: 1268321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268452:1
position: 1268452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1268657-1268858:1:exon

position:1268657:1
position: 1268657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268858:1
position: 1268858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1269569-1269654:1:exon

position:1269569:1
position: 1269569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269654:1
position: 1269654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1270111-1270216:1:exon

position:1270111:1
position: 1270111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270216:1
position: 1270216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1270447-1270545:1:exon

position:1270447:1
position: 1270447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270545:1
position: 1270545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1271069-1271249:1:exon

position:1271069:1
position: 1271069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271249:1
position: 1271249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1272098-1272223:1:exon

position:1272098:1
position: 1272098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272223:1
position: 1272223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1273163-1273305:1:exon

position:1273163:1
position: 1273163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273305:1
position: 1273305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1273541-1273717:1:exon

position:1273541:1
position: 1273541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273717:1
position: 1273717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1274068-1274139:1:exon

position:1274068:1
position: 1274068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274139:1
position: 1274139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1274833-1275003:1:exon

position:1274833:1
position: 1274833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275003:1
position: 1275003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1275192-1276447:1:exon

position:1275192:1
position: 1275192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIK3R2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PIK3R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3-kinase regulatory subunit beta isoform X1
translation: MGSTEGFQYRALYQYCKERDEDIDLLPEDILVVSKGALQALGFKDGDEQTPNQIGWIPGISERTKQKGDFPGTYVEYIGPVKISLPSHRPRVQRPLPAAPGASTSRMQEALEQGWLLPDLAEQFTPPEVAPPLLLRLVEAIEKKGLDSEMLYRTSGSELRQALKTDWVLGDVEPFDVHSLGEALRGFLQDLPAPVVPASVHGEILRILQEIPQPESCRKQLLLALESPAVPLQNLLTLQFLLRHLGKVSQQAESNGLHPRALGEIFGPPLLRLPGTSAELSPDFSGLFLETLLQVKDSEPEQVPPALPPKPSKPKPGGASLANGSSAPLQEAEWYWGDISREEVNEKLRDTPDGTFLVRDASSKVQGEYTLTLRKGGNNKLIKIFHREGKYGFSEPLTFSSVVELIHHYRHESLAQYNAKLDSKLLYPISKDQQDQLVKEDSVEAVGEQLKVYHQQYQDKSREYDLLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQCQTQEKCSREYIERFRREGNEKEVQRILMNSEKLKSRVTEIHDSKMKLEQDLKKQTSENREIDKRMNSLKPDLMQLRKLRDQYLVWLTQKGARQKKINEWLGIKNETEDQYSMMDDDEELPHHEERTWYVGKINRVQAEEMLCGKRDGTFLIRESSQKGCYACSVVVDGDTKHCVIYKTVTGYGFAEPYNLYASLKDLVLHYKHMSLVQHNDSLNVTLAYPVLSQPPAR
SIO_010081: PIK3R2
subclass of: SO_0000673
so part of: PIK3R2
location: join(1257897..1258236,1266272..1266364,1267067..1267129,1268321..1268452,1268657..1268858,1269569..1269654,1270111..1270216,1270447..1270545,1271069..1271249,1272098..1272223,1273163..1273305,1273541..1273717,1274068..1274139,1274833..1275003,1275192..1275384)
location: region:1257897-1275384:1
so has part: feature:1257897-1258236:1:exon
so has part: feature:1266272-1266364:1:exon
so has part: feature:1267067-1267129:1:exon
so has part: feature:1268321-1268452:1:exon
so has part: feature:1268657-1268858:1:exon
so has part: feature:1269569-1269654:1:exon
so has part: feature:1270111-1270216:1:exon
so has part: feature:1270447-1270545:1:exon
so has part: feature:1271069-1271249:1:exon
so has part: feature:1272098-1272223:1:exon
so has part: feature:1273163-1273305:1:exon
so has part: feature:1273541-1273717:1:exon
so has part: feature:1274068-1274139:1:exon
so has part: feature:1274833-1275003:1:exon
so has part: feature:1275192-1275384:1:exon

XP_030396311.1
type: Protein
SIO_000068: ncbiprotein

position:1257897:1
position: 1257897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275384:1
position: 1275384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257897-1258236:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266272-1266364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267067-1267129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268321-1268452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268657-1268858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269569-1269654:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1270111-1270216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1270447-1270545:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271069-1271249:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272098-1272223:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1273163-1273305:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1273541-1273717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1274068-1274139:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1274833-1275003:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1275192-1275384:1:exon

PIK3R2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PIK3R2
product: phosphoinositide-3-kinase regulatory subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540453.1
SIO_010081: PIK3R2
subclass of: SO_0000673
so part of: PIK3R2
location: join(1259676..1260017,1266272..1266364,1267067..1267129,1268321..1268452,1268657..1268858,1269569..1269654,1270111..1270216,1270447..1270545,1271069..1271249,1272098..1272223,1273163..1273305,1273541..1273717,1274068..1274139,1274833..1275003,1275192..1276447)
location: region:1259676-1276447:1
so has part: feature:1259676-1260017:1:exon
so has part: feature:1266272-1266364:1:exon
so has part: feature:1267067-1267129:1:exon
so has part: feature:1268321-1268452:1:exon
so has part: feature:1268657-1268858:1:exon
so has part: feature:1269569-1269654:1:exon
so has part: feature:1270111-1270216:1:exon
so has part: feature:1270447-1270545:1:exon
so has part: feature:1271069-1271249:1:exon
so has part: feature:1272098-1272223:1:exon
so has part: feature:1273163-1273305:1:exon
so has part: feature:1273541-1273717:1:exon
so has part: feature:1274068-1274139:1:exon
so has part: feature:1274833-1275003:1:exon
so has part: feature:1275192-1276447:1:exon

position:1259676:1
position: 1259676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259676-1260017:1:exon

position:1260017:1
position: 1260017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1266272-1266364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267067-1267129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268321-1268452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268657-1268858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269569-1269654:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1270111-1270216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1270447-1270545:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271069-1271249:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272098-1272223:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1273163-1273305:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1273541-1273717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1274068-1274139:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1274833-1275003:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1275192-1276447:1:exon

PIK3R2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PIK3R2
product: phosphoinositide-3-kinase regulatory subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540452.1
SIO_010081: PIK3R2
subclass of: SO_0000673
so part of: PIK3R2
location: join(1262267..1262411,1266272..1266364,1267067..1267129,1268321..1268452,1268657..1268858,1269569..1269654,1270111..1270216,1270447..1270545,1271069..1271249,1272098..1272223,1273163..1273305,1273541..1273717,1274068..1274139,1274833..1275003,1275192..1276447)
location: region:1262267-1276447:1
so has part: feature:1262267-1262411:1:exon
so has part: feature:1266272-1266364:1:exon
so has part: feature:1267067-1267129:1:exon
so has part: feature:1268321-1268452:1:exon
so has part: feature:1268657-1268858:1:exon
so has part: feature:1269569-1269654:1:exon
so has part: feature:1270111-1270216:1:exon
so has part: feature:1270447-1270545:1:exon
so has part: feature:1271069-1271249:1:exon
so has part: feature:1272098-1272223:1:exon
so has part: feature:1273163-1273305:1:exon
so has part: feature:1273541-1273717:1:exon
so has part: feature:1274068-1274139:1:exon
so has part: feature:1274833-1275003:1:exon
so has part: feature:1275192-1276447:1:exon

position:1262267:1
position: 1262267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1262267-1262411:1:exon

position:1262411:1
position: 1262411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1266272-1266364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267067-1267129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268321-1268452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268657-1268858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269569-1269654:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1270111-1270216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1270447-1270545:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271069-1271249:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272098-1272223:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1273163-1273305:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1273541-1273717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1274068-1274139:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1274833-1275003:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1275192-1276447:1:exon

PIK3R2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PIK3R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3-kinase regulatory subunit beta isoform X2
translation: MLQHDPRPALEHLQQGQWCSPAPKPFGWLLPDLAEQFTPPEVAPPLLLRLVEAIEKKGLDSEMLYRTSGSELRQALKTDWVLGDVEPFDVHSLGEALRGFLQDLPAPVVPASVHGEILRILQEIPQPESCRKQLLLALESPAVPLQNLLTLQFLLRHLGKVSQQAESNGLHPRALGEIFGPPLLRLPGTSAELSPDFSGLFLETLLQVKDSEPEQVPPALPPKPSKPKPGGASLANGSSAPLQEAEWYWGDISREEVNEKLRDTPDGTFLVRDASSKVQGEYTLTLRKGGNNKLIKIFHREGKYGFSEPLTFSSVVELIHHYRHESLAQYNAKLDSKLLYPISKDQQDQLVKEDSVEAVGEQLKVYHQQYQDKSREYDLLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQCQTQEKCSREYIERFRREGNEKEVQRILMNSEKLKSRVTEIHDSKMKLEQDLKKQTSENREIDKRMNSLKPDLMQLRKLRDQYLVWLTQKGARQKKINEWLGIKNETEDQYSMMDDDEELPHHEERTWYVGKINRVQAEEMLCGKRDGTFLIRESSQKGCYACSVVVDGDTKHCVIYKTVTGYGFAEPYNLYASLKDLVLHYKHMSLVQHNDSLNVTLAYPVLSQPPAR
SIO_010081: PIK3R2
subclass of: SO_0000673
so part of: PIK3R2
location: join(1262333..1262411,1266272..1266364,1267067..1267129,1268321..1268452,1268657..1268858,1269569..1269654,1270111..1270216,1270447..1270545,1271069..1271249,1272098..1272223,1273163..1273305,1273541..1273717,1274068..1274139,1274833..1275003,1275192..1275384)
location: region:1262333-1275384:1
so has part: feature:1262333-1262411:1:exon
so has part: feature:1266272-1266364:1:exon
so has part: feature:1267067-1267129:1:exon
so has part: feature:1268321-1268452:1:exon
so has part: feature:1268657-1268858:1:exon
so has part: feature:1269569-1269654:1:exon
so has part: feature:1270111-1270216:1:exon
so has part: feature:1270447-1270545:1:exon
so has part: feature:1271069-1271249:1:exon
so has part: feature:1272098-1272223:1:exon
so has part: feature:1273163-1273305:1:exon
so has part: feature:1273541-1273717:1:exon
so has part: feature:1274068-1274139:1:exon
so has part: feature:1274833-1275003:1:exon
so has part: feature:1275192-1275384:1:exon

XP_030396312.1
type: Protein
SIO_000068: ncbiprotein

position:1262333:1
position: 1262333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1262333-1262411:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266272-1266364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267067-1267129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268321-1268452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268657-1268858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269569-1269654:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1270111-1270216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1270447-1270545:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271069-1271249:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272098-1272223:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1273163-1273305:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1273541-1273717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1274068-1274139:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1274833-1275003:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1275192-1275384:1:exon

PIK3R2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PIK3R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3-kinase regulatory subunit beta isoform X3
translation: MLYRTSGSELRQALKTDWVLGDVEPFDVHSLGEALRGFLQDLPAPVVPASVHGEILRILQEIPQPESCRKQLLLALESPAVPLQNLLTLQFLLRHLGKVSQQAESNGLHPRALGEIFGPPLLRLPGTSAELSPDFSGLFLETLLQVKDSEPEQVPPALPPKPSKPKPGGASLANGSSAPLQEAEWYWGDISREEVNEKLRDTPDGTFLVRDASSKVQGEYTLTLRKGGNNKLIKIFHREGKYGFSEPLTFSSVVELIHHYRHESLAQYNAKLDSKLLYPISKDQQDQLVKEDSVEAVGEQLKVYHQQYQDKSREYDLLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQCQTQEKCSREYIERFRREGNEKEVQRILMNSEKLKSRVTEIHDSKMKLEQDLKKQTSENREIDKRMNSLKPDLMQLRKLRDQYLVWLTQKGARQKKINEWLGIKNETEDQYSMMDDDEELPHHEERTWYVGKINRVQAEEMLCGKRDGTFLIRESSQKGCYACSVVVDGDTKHCVIYKTVTGYGFAEPYNLYASLKDLVLHYKHMSLVQHNDSLNVTLAYPVLSQPPAR
SIO_010081: PIK3R2
subclass of: SO_0000673
so part of: PIK3R2
location: join(1267081..1267129,1268321..1268452,1268657..1268858,1269569..1269654,1270111..1270216,1270447..1270545,1271069..1271249,1272098..1272223,1273163..1273305,1273541..1273717,1274068..1274139,1274833..1275003,1275192..1275384)
location: region:1267081-1275384:1
so has part: feature:1267081-1267129:1:exon
so has part: feature:1268321-1268452:1:exon
so has part: feature:1268657-1268858:1:exon
so has part: feature:1269569-1269654:1:exon
so has part: feature:1270111-1270216:1:exon
so has part: feature:1270447-1270545:1:exon
so has part: feature:1271069-1271249:1:exon
so has part: feature:1272098-1272223:1:exon
so has part: feature:1273163-1273305:1:exon
so has part: feature:1273541-1273717:1:exon
so has part: feature:1274068-1274139:1:exon
so has part: feature:1274833-1275003:1:exon
so has part: feature:1275192-1275384:1:exon

XP_030396313.1
type: Protein
SIO_000068: ncbiprotein

position:1267081:1
position: 1267081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267081-1267129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1268321-1268452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1268657-1268858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1269569-1269654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1270111-1270216:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1270447-1270545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1271069-1271249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272098-1272223:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1273163-1273305:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1273541-1273717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1274068-1274139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1274833-1275003:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1275192-1275384:1:exon

IFI30
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: IFI30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1281442..1290374
location: region:1281442-1290374:1
so has part: feature:1281442-1290374:1:exon
subclass of: SO_0000010

115638734
type: Gene
SIO_000068: ncbigene

position:1281442:1
position: 1281442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290374:1
position: 1290374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281442-1290374:1:exon

IFI30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: IFI30
product: IFI30 lysosomal thiol reductase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_030540684.1
SIO_010081: IFI30
subclass of: SO_0000673
so part of: IFI30
location: join(1281442..1281773,1284727..1284909,1285152..1285226,1286002..1286097,1287446..1287598,1288778..1288846,1289233..1290374)
location: region:1281442-1290374:1
so has part: feature:1281442-1281773:1:exon
so has part: feature:1284727-1284909:1:exon
so has part: feature:1285152-1285226:1:exon
so has part: feature:1286002-1286097:1:exon
so has part: feature:1287446-1287598:1:exon
so has part: feature:1288778-1288846:1:exon
so has part: feature:1289233-1290374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1281442-1281773:1:exon

position:1281773:1
position: 1281773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1284727-1284909:1:exon

position:1284727:1
position: 1284727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284909:1
position: 1284909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1285152-1285226:1:exon

position:1285152:1
position: 1285152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285226:1
position: 1285226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1286002-1286097:1:exon

position:1286002:1
position: 1286002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286097:1
position: 1286097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1287446-1287598:1:exon

position:1287446:1
position: 1287446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287598:1
position: 1287598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1288778-1288846:1:exon

position:1288778:1
position: 1288778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288846:1
position: 1288846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1289233-1290374:1:exon

position:1289233:1
position: 1289233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFI30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: IFI30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-interferon-inducible lysosomal thiol reductase
translation: MHCWLLAALALWAVSGGDSLPACNYPPKLLCSSWKMAVACQVEKVCPKFYHRPQAANPVSLSLYYESLCPGCRNFLVTQLFPTWVMLSDIMNITLVPYGNAQEKNVSGKWQFKCQHGEPECKGNMIETCLLYQLKDFFQSFPVIFCMESAGSVVENLEACLQLYAPTVQLAEIKSCVTGDLGNKLMHHNAQLTDALSPPHNYVPWILVNGKHTDALQTRAQTALFRMVCEMYTGEKPDACKDAGAESQLL
SIO_010081: IFI30
subclass of: SO_0000673
so part of: IFI30
location: join(1281651..1281773,1284727..1284909,1285152..1285226,1286002..1286097,1287446..1287598,1288778..1288846,1289233..1289286)
location: region:1281651-1289286:1
so has part: feature:1281651-1281773:1:exon
so has part: feature:1284727-1284909:1:exon
so has part: feature:1285152-1285226:1:exon
so has part: feature:1286002-1286097:1:exon
so has part: feature:1287446-1287598:1:exon
so has part: feature:1288778-1288846:1:exon
so has part: feature:1289233-1289286:1:exon

XP_030396544.1
type: Protein
SIO_000068: ncbiprotein

position:1281651:1
position: 1281651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289286:1
position: 1289286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281651-1281773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1284727-1284909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285152-1285226:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1286002-1286097:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1287446-1287598:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288778-1288846:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1289233-1289286:1:exon

MPV17L2
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: MPV17L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1294072..1303519
location: region:1294072-1303519:1
so has part: feature:1294072-1303519:1:exon
subclass of: SO_0000010

115638552
type: Gene
SIO_000068: ncbigene

position:1294072:1
position: 1294072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303519:1
position: 1303519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294072-1303519:1:exon

MPV17L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: MPV17L2
product: MPV17 mitochondrial inner membrane protein like 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030540263.1
SIO_010081: MPV17L2
subclass of: SO_0000673
so part of: MPV17L2
location: join(1294072..1294171,1295661..1295897,1296699..1296869,1297623..1297699,1297778..1297906,1302935..1303519)
location: region:1294072-1303519:1
so has part: feature:1294072-1294171:1:exon
so has part: feature:1295661-1295897:1:exon
so has part: feature:1296699-1296869:1:exon
so has part: feature:1297623-1297699:1:exon
so has part: feature:1297778-1297906:1:exon
so has part: feature:1302935-1303519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294072-1294171:1:exon

position:1294171:1
position: 1294171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1295661-1295897:1:exon

position:1295661:1
position: 1295661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295897:1
position: 1295897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1296699-1296869:1:exon

position:1296699:1
position: 1296699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296869:1
position: 1296869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1297623-1297699:1:exon

position:1297623:1
position: 1297623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297699:1
position: 1297699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1297778-1297906:1:exon

position:1297778:1
position: 1297778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297906:1
position: 1297906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1302935-1303519:1:exon

position:1302935:1
position: 1302935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MPV17L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: MPV17L2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mpv17-like protein 2
translation: MLARGRQLFVGFSGYWKPFFRGRFLLVTNTVSCGALXGDTLQQTWEMRKDPERKRELGRTARMFAIGCSMGPLMHYWYLWLDRAFPASGLKGIKIVLKKVFIDQIIASPALGIWYFLGMGSLEGQTLEESWEELREKFWEFYKADWCVWPAAQVINFLFLPPKYRVIYVNVVTLGWDTYLAYLKHRHKQPLGAEAELKSSIQHRHTGVKTGG
SIO_010081: MPV17L2
subclass of: SO_0000673
so part of: MPV17L2
location: join(1295718..1295897,1296699..1296869,1297623..1297699,1297778..1297906,1302935..1303015)
location: region:1295718-1303015:1
so has part: feature:1295718-1295897:1:exon
so has part: feature:1296699-1296869:1:exon
so has part: feature:1297623-1297699:1:exon
so has part: feature:1297778-1297906:1:exon
so has part: feature:1302935-1303015:1:exon

XP_030396123.1
type: Protein
SIO_000068: ncbiprotein

position:1295718:1
position: 1295718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303015:1
position: 1303015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295718-1295897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296699-1296869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1297623-1297699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1297778-1297906:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1302935-1303015:1:exon

RAB3A
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: RAB3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1303938..1323000)
location: region:1303938-1323000:-1
so has part: feature:1303938-1323000:-1:exon
subclass of: SO_0000010

115638551
type: Gene
SIO_000068: ncbigene

position:1303938:-1
position: 1303938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323000:-1
position: 1323000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303938-1323000:-1:exon

RAB3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: RAB3A
product: RAB3A, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_030540262.1
SIO_010081: RAB3A
subclass of: SO_0000673
so part of: RAB3A
location: complement(join(1303938..1305647,1307214..1307338,1309629..1309747,1313003..1313230,1322898..1323000))
location: region:1303938-1323000:-1
so has part: feature:1322898-1323000:-1:exon
so has part: feature:1313003-1313230:-1:exon
so has part: feature:1309629-1309747:-1:exon
so has part: feature:1307214-1307338:-1:exon
so has part: feature:1303938-1305647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1322898-1323000:-1:exon

position:1322898:-1
position: 1322898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1313003-1313230:-1:exon

position:1313003:-1
position: 1313003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313230:-1
position: 1313230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1309629-1309747:-1:exon

position:1309629:-1
position: 1309629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309747:-1
position: 1309747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1307214-1307338:-1:exon

position:1307214:-1
position: 1307214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307338:-1
position: 1307338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1303938-1305647:-1:exon

position:1305647:-1
position: 1305647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: RAB3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-3A
translation: MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVASERGRQLAEHLGFEFFEASAKDNINVKQTFERLVDIICEKMSESLDTADPAVTGVKPGPQLTDQQAPPHQDCAC
SIO_010081: RAB3A
subclass of: SO_0000673
so part of: RAB3A
location: complement(join(1305457..1305647,1307214..1307338,1309629..1309747,1313003..1313230))
location: region:1305457-1313230:-1
so has part: feature:1313003-1313230:-1:exon
so has part: feature:1309629-1309747:-1:exon
so has part: feature:1307214-1307338:-1:exon
so has part: feature:1305457-1305647:-1:exon

XP_030396122.1
type: Protein
SIO_000068: ncbiprotein

position:1305457:-1
position: 1305457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1313003-1313230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1309629-1309747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1307214-1307338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1305457-1305647:-1:exon

PDE4C
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: PDE4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1336831..1435064)
location: region:1336831-1435064:-1
so has part: feature:1336831-1435064:-1:exon
subclass of: SO_0000010

115638587
type: Gene
SIO_000068: ncbigene

position:1336831:-1
position: 1336831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435064:-1
position: 1435064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1336831-1435064:-1:exon

PDE4C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PDE4C
product: phosphodiesterase 4C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030540346.1
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: complement(join(1336831..1339389,1340067..1340249,1340724..1340846,1341587..1341741,1342447..1342546,1343603..1343770,1344418..1344516,1345118..1345296,1348264..1348357,1354271..1354383,1357082..1357131,1357438..1357511,1358284..1358320,1358960..1359151,1413502..1413719,1430782..1430858,1434820..1435064))
location: region:1336831-1435064:-1
so has part: feature:1434820-1435064:-1:exon
so has part: feature:1430782-1430858:-1:exon
so has part: feature:1413502-1413719:-1:exon
so has part: feature:1358960-1359151:-1:exon
so has part: feature:1358284-1358320:-1:exon
so has part: feature:1357438-1357511:-1:exon
so has part: feature:1357082-1357131:-1:exon
so has part: feature:1354271-1354383:-1:exon
so has part: feature:1348264-1348357:-1:exon
so has part: feature:1345118-1345296:-1:exon
so has part: feature:1344418-1344516:-1:exon
so has part: feature:1343603-1343770:-1:exon
so has part: feature:1342447-1342546:-1:exon
so has part: feature:1341587-1341741:-1:exon
so has part: feature:1340724-1340846:-1:exon
so has part: feature:1340067-1340249:-1:exon
so has part: feature:1336831-1339389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1434820-1435064:-1:exon

position:1434820:-1
position: 1434820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1430782-1430858:-1:exon

position:1430782:-1
position: 1430782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430858:-1
position: 1430858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1413502-1413719:-1:exon

position:1413502:-1
position: 1413502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413719:-1
position: 1413719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1358960-1359151:-1:exon

position:1358960:-1
position: 1358960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359151:-1
position: 1359151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1358284-1358320:-1:exon

position:1358284:-1
position: 1358284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358320:-1
position: 1358320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1357438-1357511:-1:exon

position:1357438:-1
position: 1357438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357511:-1
position: 1357511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1357082-1357131:-1:exon

position:1357082:-1
position: 1357082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357131:-1
position: 1357131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1354271-1354383:-1:exon

position:1354271:-1
position: 1354271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354383:-1
position: 1354383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1348264-1348357:-1:exon

position:1348264:-1
position: 1348264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348357:-1
position: 1348357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1345118-1345296:-1:exon

position:1345118:-1
position: 1345118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345296:-1
position: 1345296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1344418-1344516:-1:exon

position:1344418:-1
position: 1344418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344516:-1
position: 1344516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1343603-1343770:-1:exon

position:1343603:-1
position: 1343603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343770:-1
position: 1343770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1342447-1342546:-1:exon

position:1342447:-1
position: 1342447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342546:-1
position: 1342546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1341587-1341741:-1:exon

position:1341587:-1
position: 1341587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341741:-1
position: 1341741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1340724-1340846:-1:exon

position:1340724:-1
position: 1340724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340846:-1
position: 1340846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1340067-1340249:-1:exon

position:1340067:-1
position: 1340067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340249:-1
position: 1340249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1336831-1339389:-1:exon

position:1339389:-1
position: 1339389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDE4C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PDE4C
product: phosphodiesterase 4C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030540347.1
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: complement(join(1336831..1339389,1340067..1340249,1340724..1340846,1341587..1341741,1342447..1342546,1343603..1343767,1344418..1344516,1345118..1345296,1348264..1348357,1354271..1354383,1357082..1357131,1357438..1357511,1358284..1358320,1358960..1359151,1413502..1413719,1430782..1430858,1434820..1435063))
location: region:1336831-1435063:-1
so has part: feature:1434820-1435063:-1:exon
so has part: feature:1430782-1430858:-1:exon
so has part: feature:1413502-1413719:-1:exon
so has part: feature:1358960-1359151:-1:exon
so has part: feature:1358284-1358320:-1:exon
so has part: feature:1357438-1357511:-1:exon
so has part: feature:1357082-1357131:-1:exon
so has part: feature:1354271-1354383:-1:exon
so has part: feature:1348264-1348357:-1:exon
so has part: feature:1345118-1345296:-1:exon
so has part: feature:1344418-1344516:-1:exon
so has part: feature:1343603-1343767:-1:exon
so has part: feature:1342447-1342546:-1:exon
so has part: feature:1341587-1341741:-1:exon
so has part: feature:1340724-1340846:-1:exon
so has part: feature:1340067-1340249:-1:exon
so has part: feature:1336831-1339389:-1:exon

position:1435063:-1
position: 1435063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1434820-1435063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430782-1430858:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1413502-1413719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358960-1359151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358284-1358320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357438-1357511:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1357082-1357131:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1354271-1354383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1348264-1348357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1345118-1345296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1344418-1344516:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1343603-1343767:-1:exon

position:1343767:-1
position: 1343767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1342447-1342546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1341587-1341741:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1340724-1340846:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1340067-1340249:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1336831-1339389:-1:exon

PDE4C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PDE4C
product: phosphodiesterase 4C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030540348.1
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: complement(join(1336831..1339389,1340067..1340249,1340724..1340846,1341587..1341741,1342447..1342546,1343603..1343770,1344418..1344516,1345118..1345296,1348264..1348357,1354271..1354383,1357082..1357131,1357438..1357511,1358284..1358320,1358960..1359151,1377320..1378072))
location: region:1336831-1378072:-1
so has part: feature:1377320-1378072:-1:exon
so has part: feature:1358960-1359151:-1:exon
so has part: feature:1358284-1358320:-1:exon
so has part: feature:1357438-1357511:-1:exon
so has part: feature:1357082-1357131:-1:exon
so has part: feature:1354271-1354383:-1:exon
so has part: feature:1348264-1348357:-1:exon
so has part: feature:1345118-1345296:-1:exon
so has part: feature:1344418-1344516:-1:exon
so has part: feature:1343603-1343770:-1:exon
so has part: feature:1342447-1342546:-1:exon
so has part: feature:1341587-1341741:-1:exon
so has part: feature:1340724-1340846:-1:exon
so has part: feature:1340067-1340249:-1:exon
so has part: feature:1336831-1339389:-1:exon

position:1378072:-1
position: 1378072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377320-1378072:-1:exon

position:1377320:-1
position: 1377320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1358960-1359151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358284-1358320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357438-1357511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357082-1357131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354271-1354383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1348264-1348357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1345118-1345296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1344418-1344516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1343603-1343770:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1342447-1342546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1341587-1341741:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1340724-1340846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1340067-1340249:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1336831-1339389:-1:exon

PDE4C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PDE4C
product: phosphodiesterase 4C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030540350.1
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: complement(join(1336831..1339389,1340067..1340249,1340724..1340846,1341587..1341741,1342447..1342546,1343603..1343767,1344418..1344516,1345118..1345296,1348264..1348357,1354271..1354383,1357082..1357131,1357438..1357511,1358284..1358320,1358960..1359151,1377320..1378071))
location: region:1336831-1378071:-1
so has part: feature:1377320-1378071:-1:exon
so has part: feature:1358960-1359151:-1:exon
so has part: feature:1358284-1358320:-1:exon
so has part: feature:1357438-1357511:-1:exon
so has part: feature:1357082-1357131:-1:exon
so has part: feature:1354271-1354383:-1:exon
so has part: feature:1348264-1348357:-1:exon
so has part: feature:1345118-1345296:-1:exon
so has part: feature:1344418-1344516:-1:exon
so has part: feature:1343603-1343767:-1:exon
so has part: feature:1342447-1342546:-1:exon
so has part: feature:1341587-1341741:-1:exon
so has part: feature:1340724-1340846:-1:exon
so has part: feature:1340067-1340249:-1:exon
so has part: feature:1336831-1339389:-1:exon

position:1378071:-1
position: 1378071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377320-1378071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1358960-1359151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358284-1358320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357438-1357511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357082-1357131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354271-1354383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1348264-1348357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1345118-1345296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1344418-1344516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1343603-1343767:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1342447-1342546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1341587-1341741:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1340724-1340846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1340067-1340249:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1336831-1339389:-1:exon

PDE4C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PDE4C
product: phosphodiesterase 4C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030540351.1
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: complement(join(1336831..1339389,1340067..1340249,1340724..1340846,1341587..1341741,1342447..1342546,1343603..1343770,1344418..1344516,1345118..1345296,1348264..1348357,1354271..1354383,1357082..1357131,1357438..1357511,1358284..1358320,1358960..1359151,1364530..1365117))
location: region:1336831-1365117:-1
so has part: feature:1364530-1365117:-1:exon
so has part: feature:1358960-1359151:-1:exon
so has part: feature:1358284-1358320:-1:exon
so has part: feature:1357438-1357511:-1:exon
so has part: feature:1357082-1357131:-1:exon
so has part: feature:1354271-1354383:-1:exon
so has part: feature:1348264-1348357:-1:exon
so has part: feature:1345118-1345296:-1:exon
so has part: feature:1344418-1344516:-1:exon
so has part: feature:1343603-1343770:-1:exon
so has part: feature:1342447-1342546:-1:exon
so has part: feature:1341587-1341741:-1:exon
so has part: feature:1340724-1340846:-1:exon
so has part: feature:1340067-1340249:-1:exon
so has part: feature:1336831-1339389:-1:exon

position:1365117:-1
position: 1365117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1364530-1365117:-1:exon

position:1364530:-1
position: 1364530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1358960-1359151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358284-1358320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357438-1357511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357082-1357131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354271-1354383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1348264-1348357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1345118-1345296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1344418-1344516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1343603-1343770:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1342447-1342546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1341587-1341741:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1340724-1340846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1340067-1340249:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1336831-1339389:-1:exon

PDE4C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PDE4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-specific 3',5'-cyclic phosphodiesterase 4C isoform X2
translation: MDGFSVPALLTATQREGPGPAGAEARMRRSRTALSFLSMERSRDSPDLGSCSAAPHMNAIKRRFSGTPLLPPLACRHVALSEAGRPPEPEGPRVVFTIEESRPSSGQEPGFLRFDIENGLSSGRSPLDLQASPGSGLVLQGNVSHSQRRESFLYRSDSDYDLSPKAMSRNSSIASDLHGEDMIVTPFAQVLASLRTVRSNFAMLMHLQDRVASKRTSSSNPPSVCKASLSEDACQKLAIETLEELDWCLDQLETLQTRHSVSEMASNKFKRMLNRELTHLSETSRSGNQVSEYISSTFLDKQHEVEIPSPMPKEKEAEKTTRPMAQISGLKKLTHSSSFISSSIPRFGVKTDQEGLLAKELEDTNKWGLDMFKITEYSGNHPLTVIMYSIFQERDLMKTFCIPADTFITYMMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEVMAAIFASAIHDVDHPGVSNQFLINTNSELALMYNDVSVLENHHLAVGFKLLQEENCDIFQHLSKKQRQSLRKMAIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYSDRIQVLQNMVHCADLSNPTKPLELYRKWTDRIMVEFFHQGDREREKGMEISPMCDKLSASVEKSQVGFIDYIAHPLWETWADLVHPDAQEILDTLEDNREWYQSMIPHSPSLPEEQDPEKGGGGEKFQFQLTLEEEGESDTELEEAESPLEEDNSGSDSKTLATDDSESAELERLSPGSAGRDSPPPAHSSPLRNTLAKQKEVLHFDNRRALERTLSQPDGGTSLGCPELGRRGSLEARELGLDAEGNLTFLPLGT
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: complement(join(1338814..1339389,1340067..1340249,1340724..1340846,1341587..1341741,1342447..1342546,1343603..1343767,1344418..1344516,1345118..1345296,1348264..1348357,1354271..1354383,1357082..1357131,1357438..1357511,1358284..1358320,1358960..1359151,1413502..1413719,1430782..1430858,1434820..1434862))
location: region:1338814-1434862:-1
so has part: feature:1434820-1434862:-1:exon
so has part: feature:1430782-1430858:-1:exon
so has part: feature:1413502-1413719:-1:exon
so has part: feature:1358960-1359151:-1:exon
so has part: feature:1358284-1358320:-1:exon
so has part: feature:1357438-1357511:-1:exon
so has part: feature:1357082-1357131:-1:exon
so has part: feature:1354271-1354383:-1:exon
so has part: feature:1348264-1348357:-1:exon
so has part: feature:1345118-1345296:-1:exon
so has part: feature:1344418-1344516:-1:exon
so has part: feature:1343603-1343767:-1:exon
so has part: feature:1342447-1342546:-1:exon
so has part: feature:1341587-1341741:-1:exon
so has part: feature:1340724-1340846:-1:exon
so has part: feature:1340067-1340249:-1:exon
so has part: feature:1338814-1339389:-1:exon

XP_030396207.1
type: Protein
SIO_000068: ncbiprotein

position:1338814:-1
position: 1338814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434862:-1
position: 1434862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1434820-1434862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430782-1430858:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1413502-1413719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358960-1359151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358284-1358320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357438-1357511:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1357082-1357131:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1354271-1354383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1348264-1348357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1345118-1345296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1344418-1344516:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1343603-1343767:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1342447-1342546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1341587-1341741:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1340724-1340846:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1340067-1340249:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1338814-1339389:-1:exon

PDE4C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PDE4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-specific 3',5'-cyclic phosphodiesterase 4C isoform X1
translation: MDGFSVPALLTATQREGPGPAGAEARMRRSRTALSFLSMERSRDSPDLGSCSAAPHMNAIKRRFSGTPLLPPLACRHVALSEAGRPPEPEGPRVVFTIEESRPSSGQEPGFLRFDIENGLSSGRSPLDLQASPGSGLVLQGNVSHSQRRESFLYRSDSDYDLSPKAMSRNSSIASDLHGEDMIVTPFAQVLASLRTVRSNFAMLMHLQDRVASKRTSSSNPPSVCKASLSEDACQKLAIETLEELDWCLDQLETLQTRHSVSEMASNKFKRMLNRELTHLSETSRSGNQVSEYISSTFLDKQHEVEIPSPMPKEKEAEKTTRPMAQISGLKKLTHSSSFISSSIPRFGVKTDQEGLLAKELEDTNKWGLDMFKITEYSGNHPLTVIMYSIFQQERDLMKTFCIPADTFITYMMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEVMAAIFASAIHDVDHPGVSNQFLINTNSELALMYNDVSVLENHHLAVGFKLLQEENCDIFQHLSKKQRQSLRKMAIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYSDRIQVLQNMVHCADLSNPTKPLELYRKWTDRIMVEFFHQGDREREKGMEISPMCDKLSASVEKSQVGFIDYIAHPLWETWADLVHPDAQEILDTLEDNREWYQSMIPHSPSLPEEQDPEKGGGGEKFQFQLTLEEEGESDTELEEAESPLEEDNSGSDSKTLATDDSESAELERLSPGSAGRDSPPPAHSSPLRNTLAKQKEVLHFDNRRALERTLSQPDGGTSLGCPELGRRGSLEARELGLDAEGNLTFLPLGT
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: complement(join(1338814..1339389,1340067..1340249,1340724..1340846,1341587..1341741,1342447..1342546,1343603..1343770,1344418..1344516,1345118..1345296,1348264..1348357,1354271..1354383,1357082..1357131,1357438..1357511,1358284..1358320,1358960..1359151,1413502..1413719,1430782..1430858,1434820..1434862))
location: region:1338814-1434862:-1
so has part: feature:1434820-1434862:-1:exon
so has part: feature:1430782-1430858:-1:exon
so has part: feature:1413502-1413719:-1:exon
so has part: feature:1358960-1359151:-1:exon
so has part: feature:1358284-1358320:-1:exon
so has part: feature:1357438-1357511:-1:exon
so has part: feature:1357082-1357131:-1:exon
so has part: feature:1354271-1354383:-1:exon
so has part: feature:1348264-1348357:-1:exon
so has part: feature:1345118-1345296:-1:exon
so has part: feature:1344418-1344516:-1:exon
so has part: feature:1343603-1343770:-1:exon
so has part: feature:1342447-1342546:-1:exon
so has part: feature:1341587-1341741:-1:exon
so has part: feature:1340724-1340846:-1:exon
so has part: feature:1340067-1340249:-1:exon
so has part: feature:1338814-1339389:-1:exon

XP_030396206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1434820-1434862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430782-1430858:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1413502-1413719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358960-1359151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358284-1358320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357438-1357511:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1357082-1357131:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1354271-1354383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1348264-1348357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1345118-1345296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1344418-1344516:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1343603-1343770:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1342447-1342546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1341587-1341741:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1340724-1340846:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1340067-1340249:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1338814-1339389:-1:exon

PDE4C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PDE4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-specific 3',5'-cyclic phosphodiesterase 4C isoform X4
translation: MLNPKHGSPGASPSASPCSSPRNSPILFRKLMMNQSIRMQRRFTVAHPLCFDIENGLSSGRSPLDLQASPGSGLVLQGNVSHSQRRESFLYRSDSDYDLSPKAMSRNSSIASDLHGEDMIVTPFAQVLASLRTVRSNFAMLMHLQDRVASKRTSSSNPPSVCKASLSEDACQKLAIETLEELDWCLDQLETLQTRHSVSEMASNKFKRMLNRELTHLSETSRSGNQVSEYISSTFLDKQHEVEIPSPMPKEKEAEKTTRPMAQISGLKKLTHSSSFISSSIPRFGVKTDQEGLLAKELEDTNKWGLDMFKITEYSGNHPLTVIMYSIFQERDLMKTFCIPADTFITYMMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEVMAAIFASAIHDVDHPGVSNQFLINTNSELALMYNDVSVLENHHLAVGFKLLQEENCDIFQHLSKKQRQSLRKMAIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYSDRIQVLQNMVHCADLSNPTKPLELYRKWTDRIMVEFFHQGDREREKGMEISPMCDKLSASVEKSQVGFIDYIAHPLWETWADLVHPDAQEILDTLEDNREWYQSMIPHSPSLPEEQDPEKGGGGEKFQFQLTLEEEGESDTELEEAESPLEEDNSGSDSKTLATDDSESAELERLSPGSAGRDSPPPAHSSPLRNTLAKQKEVLHFDNRRALERTLSQPDGGTSLGCPELGRRGSLEARELGLDAEGNLTFLPLGT
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: complement(join(1338814..1339389,1340067..1340249,1340724..1340846,1341587..1341741,1342447..1342546,1343603..1343767,1344418..1344516,1345118..1345296,1348264..1348357,1354271..1354383,1357082..1357131,1357438..1357511,1358284..1358320,1358960..1359151,1377320..1377468))
location: region:1338814-1377468:-1
so has part: feature:1377320-1377468:-1:exon
so has part: feature:1358960-1359151:-1:exon
so has part: feature:1358284-1358320:-1:exon
so has part: feature:1357438-1357511:-1:exon
so has part: feature:1357082-1357131:-1:exon
so has part: feature:1354271-1354383:-1:exon
so has part: feature:1348264-1348357:-1:exon
so has part: feature:1345118-1345296:-1:exon
so has part: feature:1344418-1344516:-1:exon
so has part: feature:1343603-1343767:-1:exon
so has part: feature:1342447-1342546:-1:exon
so has part: feature:1341587-1341741:-1:exon
so has part: feature:1340724-1340846:-1:exon
so has part: feature:1340067-1340249:-1:exon
so has part: feature:1338814-1339389:-1:exon

XP_030396210.1
type: Protein
SIO_000068: ncbiprotein

position:1377468:-1
position: 1377468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377320-1377468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1358960-1359151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358284-1358320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357438-1357511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357082-1357131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354271-1354383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1348264-1348357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1345118-1345296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1344418-1344516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1343603-1343767:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1342447-1342546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1341587-1341741:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1340724-1340846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1340067-1340249:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1338814-1339389:-1:exon

PDE4C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PDE4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-specific 3',5'-cyclic phosphodiesterase 4C isoform X3
translation: MLNPKHGSPGASPSASPCSSPRNSPILFRKLMMNQSIRMQRRFTVAHPLCFDIENGLSSGRSPLDLQASPGSGLVLQGNVSHSQRRESFLYRSDSDYDLSPKAMSRNSSIASDLHGEDMIVTPFAQVLASLRTVRSNFAMLMHLQDRVASKRTSSSNPPSVCKASLSEDACQKLAIETLEELDWCLDQLETLQTRHSVSEMASNKFKRMLNRELTHLSETSRSGNQVSEYISSTFLDKQHEVEIPSPMPKEKEAEKTTRPMAQISGLKKLTHSSSFISSSIPRFGVKTDQEGLLAKELEDTNKWGLDMFKITEYSGNHPLTVIMYSIFQQERDLMKTFCIPADTFITYMMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEVMAAIFASAIHDVDHPGVSNQFLINTNSELALMYNDVSVLENHHLAVGFKLLQEENCDIFQHLSKKQRQSLRKMAIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYSDRIQVLQNMVHCADLSNPTKPLELYRKWTDRIMVEFFHQGDREREKGMEISPMCDKLSASVEKSQVGFIDYIAHPLWETWADLVHPDAQEILDTLEDNREWYQSMIPHSPSLPEEQDPEKGGGGEKFQFQLTLEEEGESDTELEEAESPLEEDNSGSDSKTLATDDSESAELERLSPGSAGRDSPPPAHSSPLRNTLAKQKEVLHFDNRRALERTLSQPDGGTSLGCPELGRRGSLEARELGLDAEGNLTFLPLGT
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: complement(join(1338814..1339389,1340067..1340249,1340724..1340846,1341587..1341741,1342447..1342546,1343603..1343770,1344418..1344516,1345118..1345296,1348264..1348357,1354271..1354383,1357082..1357131,1357438..1357511,1358284..1358320,1358960..1359151,1377320..1377468))
location: region:1338814-1377468:-1
so has part: feature:1377320-1377468:-1:exon
so has part: feature:1358960-1359151:-1:exon
so has part: feature:1358284-1358320:-1:exon
so has part: feature:1357438-1357511:-1:exon
so has part: feature:1357082-1357131:-1:exon
so has part: feature:1354271-1354383:-1:exon
so has part: feature:1348264-1348357:-1:exon
so has part: feature:1345118-1345296:-1:exon
so has part: feature:1344418-1344516:-1:exon
so has part: feature:1343603-1343770:-1:exon
so has part: feature:1342447-1342546:-1:exon
so has part: feature:1341587-1341741:-1:exon
so has part: feature:1340724-1340846:-1:exon
so has part: feature:1340067-1340249:-1:exon
so has part: feature:1338814-1339389:-1:exon

XP_030396208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1377320-1377468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1358960-1359151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358284-1358320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357438-1357511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357082-1357131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354271-1354383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1348264-1348357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1345118-1345296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1344418-1344516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1343603-1343770:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1342447-1342546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1341587-1341741:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1340724-1340846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1340067-1340249:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1338814-1339389:-1:exon

PDE4C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PDE4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-specific 3',5'-cyclic phosphodiesterase 4C isoform X5
translation: MGLSGQAPTLSSLEEKTRPPCRCGGAWACWHESSWRARDRMSLPTSCGSVALADCALMVCNSYLAGSPRAVNRPIDIVQKHRRFDIENGLSSGRSPLDLQASPGSGLVLQGNVSHSQRRESFLYRSDSDYDLSPKAMSRNSSIASDLHGEDMIVTPFAQVLASLRTVRSNFAMLMHLQDRVASKRTSSSNPPSVCKASLSEDACQKLAIETLEELDWCLDQLETLQTRHSVSEMASNKFKRMLNRELTHLSETSRSGNQVSEYISSTFLDKQHEVEIPSPMPKEKEAEKTTRPMAQISGLKKLTHSSSFISSSIPRFGVKTDQEGLLAKELEDTNKWGLDMFKITEYSGNHPLTVIMYSIFQQERDLMKTFCIPADTFITYMMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEVMAAIFASAIHDVDHPGVSNQFLINTNSELALMYNDVSVLENHHLAVGFKLLQEENCDIFQHLSKKQRQSLRKMAIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYSDRIQVLQNMVHCADLSNPTKPLELYRKWTDRIMVEFFHQGDREREKGMEISPMCDKLSASVEKSQVGFIDYIAHPLWETWADLVHPDAQEILDTLEDNREWYQSMIPHSPSLPEEQDPEKGGGGEKFQFQLTLEEEGESDTELEEAESPLEEDNSGSDSKTLATDDSESAELERLSPGSAGRDSPPPAHSSPLRNTLAKQKEVLHFDNRRALERTLSQPDGGTSLGCPELGRRGSLEARELGLDAEGNLTFLPLGT
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: complement(join(1338814..1339389,1340067..1340249,1340724..1340846,1341587..1341741,1342447..1342546,1343603..1343770,1344418..1344516,1345118..1345296,1348264..1348357,1354271..1354383,1357082..1357131,1357438..1357511,1358284..1358320,1358960..1359151,1364530..1364777))
location: region:1338814-1364777:-1
so has part: feature:1364530-1364777:-1:exon
so has part: feature:1358960-1359151:-1:exon
so has part: feature:1358284-1358320:-1:exon
so has part: feature:1357438-1357511:-1:exon
so has part: feature:1357082-1357131:-1:exon
so has part: feature:1354271-1354383:-1:exon
so has part: feature:1348264-1348357:-1:exon
so has part: feature:1345118-1345296:-1:exon
so has part: feature:1344418-1344516:-1:exon
so has part: feature:1343603-1343770:-1:exon
so has part: feature:1342447-1342546:-1:exon
so has part: feature:1341587-1341741:-1:exon
so has part: feature:1340724-1340846:-1:exon
so has part: feature:1340067-1340249:-1:exon
so has part: feature:1338814-1339389:-1:exon

XP_030396211.1
type: Protein
SIO_000068: ncbiprotein

position:1364777:-1
position: 1364777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1364530-1364777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1358960-1359151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358284-1358320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357438-1357511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357082-1357131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354271-1354383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1348264-1348357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1345118-1345296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1344418-1344516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1343603-1343770:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1342447-1342546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1341587-1341741:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1340724-1340846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1340067-1340249:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1338814-1339389:-1:exon

LOC115638589
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LOC115638589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1440022..1445710)
location: region:1440022-1445710:-1
so has part: feature:1440022-1445710:-1:exon
subclass of: SO_0000010

115638589
type: Gene
SIO_000068: ncbigene

position:1440022:-1
position: 1440022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445710:-1
position: 1445710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1440022-1445710:-1:exon

LOC115638589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LOC115638589
product: endochitinase A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030540353.1
SIO_010081: LOC115638589
subclass of: SO_0000673
so part of: LOC115638589
location: complement(join(1440022..1440260,1440818..1440978,1442013..1442399,1445592..1445710))
location: region:1440022-1445710:-1
so has part: feature:1445592-1445710:-1:exon
so has part: feature:1442013-1442399:-1:exon
so has part: feature:1440818-1440978:-1:exon
so has part: feature:1440022-1440260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1445592-1445710:-1:exon

position:1445592:-1
position: 1445592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1442013-1442399:-1:exon

position:1442013:-1
position: 1442013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442399:-1
position: 1442399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1440818-1440978:-1:exon

position:1440818:-1
position: 1440818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440978:-1
position: 1440978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1440022-1440260:-1:exon

position:1440260:-1
position: 1440260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115638589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LOC115638589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endochitinase A-like
translation: MARGTRWLLIGCGLCLALAVRNATATTTVTQQTASSQHPSATATPPQSPLSATQHPSTTATPPQSPVATSRDTSLSAALTDSTTASTQNRTTAAAPASSRTPESASSPPLSSASPSHTNTSATPAASSSETHSTEQPGPNSGTTASGSAVSSLKQPTLSLSPGLVAVICIFVAILLIAAGVVVVKLCRRREPAFEKLDEVPMGKMTEDSPFARYPPK
SIO_010081: LOC115638589
subclass of: SO_0000673
so part of: LOC115638589
location: complement(join(1440213..1440260,1440818..1440978,1442013..1442399,1445592..1445649))
location: region:1440213-1445649:-1
so has part: feature:1445592-1445649:-1:exon
so has part: feature:1442013-1442399:-1:exon
so has part: feature:1440818-1440978:-1:exon
so has part: feature:1440213-1440260:-1:exon

XP_030396213.1
type: Protein
SIO_000068: ncbiprotein

position:1440213:-1
position: 1440213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445649:-1
position: 1445649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445592-1445649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442013-1442399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1440818-1440978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1440213-1440260:-1:exon

JUND
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: JUND
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1450439..1451988)
location: region:1450439-1451988:-1
so has part: feature:1450439-1451988:-1:exon
subclass of: SO_0000010

115638588
type: Gene
SIO_000068: ncbigene

position:1450439:-1
position: 1450439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451988:-1
position: 1451988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450439-1451988:-1:exon

JUND
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: JUND
product: JunD proto-oncogene, AP-1 transcription factor subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030540352.1
SIO_010081: JUND
subclass of: SO_0000673
so part of: JUND
location: complement(join(1450439..1450869,1450943..1451988))
location: region:1450439-1451988:-1
so has part: feature:1450943-1451988:-1:exon
so has part: feature:1450439-1450869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1450943-1451988:-1:exon

position:1450943:-1
position: 1450943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1450439-1450869:-1:exon

position:1450869:-1
position: 1450869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

JUND
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: JUND
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor jun-D
translation: METPFYHDDVLSGFGSGSAPSRGSSSGLARPFPGGSMMKKDALALSDQVVATLKAPGQALHQLRGAAGGGGEGPALLSSAELGLLKLGSPELERLIIQSNGLVTTTPTSSQFLYPKVAASEEQEFAEGFVKALEDLHKQNQLGAGGGAAGGPPGDLPPAASLAQQPPPPPPEPPVYANLSSYPGTTVNYATETVPYPPPPGLGGAPPHPRLQPPPLKDEPQIVPEVPSFGESPPLSPIDMDTQERIKAERKRLRNRIAASKCRKRKLERISRLEEKVKSLKSQNTELASTASLLREQVAQLKQKVLSHVNSGCQLLPQQHQVPAY
SIO_010081: JUND
subclass of: SO_0000673
so part of: JUND
location: complement(1450956..1451933)
location: region:1450956-1451933:-1
so has part: feature:1450956-1451933:-1:exon

XP_030396212.1
type: Protein
SIO_000068: ncbiprotein

position:1450956:-1
position: 1450956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451933:-1
position: 1451933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450956-1451933:-1:exon

LSM4
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: LSM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1486588..1495245)
location: region:1486588-1495245:-1
so has part: feature:1486588-1495245:-1:exon
subclass of: SO_0000010

115638651
type: Gene
SIO_000068: ncbigene

position:1486588:-1
position: 1486588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495245:-1
position: 1495245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1486588-1495245:-1:exon

LSM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: LSM4
product: LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_030540507.1
SIO_010081: LSM4
subclass of: SO_0000673
so part of: LSM4
location: complement(join(1486588..1487362,1490002..1490185,1492570..1492668,1494444..1494485,1495117..1495245))
location: region:1486588-1495245:-1
so has part: feature:1495117-1495245:-1:exon
so has part: feature:1494444-1494485:-1:exon
so has part: feature:1492570-1492668:-1:exon
so has part: feature:1490002-1490185:-1:exon
so has part: feature:1486588-1487362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1495117-1495245:-1:exon

position:1495117:-1
position: 1495117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1494444-1494485:-1:exon

position:1494444:-1
position: 1494444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494485:-1
position: 1494485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1492570-1492668:-1:exon

position:1492570:-1
position: 1492570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492668:-1
position: 1492668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1490002-1490185:-1:exon

position:1490002:-1
position: 1490002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490185:-1
position: 1490185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1486588-1487362:-1:exon

position:1487362:-1
position: 1487362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LSM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: LSM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm4
translation: MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGGGGAGRGVFGGRGRGIPGSGRGQQEKKPGRQSAKQ
SIO_010081: LSM4
subclass of: SO_0000673
so part of: LSM4
location: complement(join(1487274..1487362,1490002..1490185,1492570..1492668,1494444..1494485,1495117..1495119))
location: region:1487274-1495119:-1
so has part: feature:1495117-1495119:-1:exon
so has part: feature:1494444-1494485:-1:exon
so has part: feature:1492570-1492668:-1:exon
so has part: feature:1490002-1490185:-1:exon
so has part: feature:1487274-1487362:-1:exon

XP_030396367.1
type: Protein
SIO_000068: ncbiprotein

position:1487274:-1
position: 1487274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495119:-1
position: 1495119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1495117-1495119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494444-1494485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1492570-1492668:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1490002-1490185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1487274-1487362:-1:exon

PGPEP1
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: PGPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1501145..1525638
location: region:1501145-1525638:1
so has part: feature:1501145-1525638:1:exon
subclass of: SO_0000010

115638585
type: Gene
SIO_000068: ncbigene

position:1501145:1
position: 1501145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1525638:1
position: 1525638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1501145-1525638:1:exon

PGPEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1825980
gene: PGPEP1
product: pyroglutamyl-peptidase I
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_030540343.1
SIO_010081: PGPEP1
subclass of: SO_0000673
so part of: PGPEP1
location: join(1501145..1501213,1504111..1504163,1514210..1514326,1516046..1516278,1518178..1525638)
location: region:1501145-1525638:1
so has part: feature:1501145-1501213:1:exon
so has part: feature:1504111-1504163:1:exon
so has part: feature:1514210-1514326:1:exon
so has part: feature:1516046-1516278:1:exon
so has part: feature:1518178-1525638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1501145-1501213:1:exon

position:1501213:1
position: 1501213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1504111-1504163:1:exon

position:1504111:1
position: 1504111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504163:1
position: 1504163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1514210-1514326:1:exon

position:1514210:1
position: 1514210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514326:1
position: 1514326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1516046-1516278:1:exon

position:1516046:1
position: 1516046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1516278:1
position: 1516278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1518178-1525638:1:exon

position:1518178:1
position: 1518178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PGPEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1825980
gene: PGPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyroglutamyl-peptidase 1
translation: MEPPRRPVVVTGFGPFGEHAVNASWIAVQELVKLGLGDGVDLYVYEIPVEYQTVQRLIPALWKKHSPELVVHVGVSGMATTVTLEKCGHNVGYKGLDNCRFCPGSQCCVEGGPECIDSIIDMDAVCRRVSTLGLDVTVTISKDAGRYLCDFTYYTSLYQSHGRSAFVHVPPLGKPYTAEQLGRALQALIEEMLDVLEHSEGKINCRHEH
SIO_010081: PGPEP1
subclass of: SO_0000673
so part of: PGPEP1
location: join(1501180..1501213,1504111..1504163,1514210..1514326,1516046..1516278,1518178..1518370)
location: region:1501180-1518370:1
so has part: feature:1501180-1501213:1:exon
so has part: feature:1504111-1504163:1:exon
so has part: feature:1514210-1514326:1:exon
so has part: feature:1516046-1516278:1:exon
so has part: feature:1518178-1518370:1:exon

XP_030396203.1
type: Protein
SIO_000068: ncbiprotein

position:1501180:1
position: 1501180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518370:1
position: 1518370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1501180-1501213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504111-1504163:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1514210-1514326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1516046-1516278:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1518178-1518370:1:exon

GDF15
type: Gene
subclass of: SO_0000704
RO_0002162: 1825980
gene: GDF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1547972..1553460
location: region:1547972-1553460:1
so has part: feature:1547972-1553460:1:exon
subclass of: SO_0000010

115638789
type: Gene
SIO_000068: ncbigene