Streptococcus marmotae strain HTS5 plasmid unnamed 1, complete sequence.
Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.
Streptococcus marmotae sp. nov. isolated from the respiratory tract of Marmota himalayana in Qinghai-Tibet Plateau of China
Submitted (01-APR-2016) National Institute for Communicable Disease Control and Prevention, China CDC, Changbai Road 155, Changping, Beijing 102206, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP015197.1.\nSource DNA and Bacteria are available from:1. National Institute\nfor Communicable Disease Control and Prevention, Chinese Center for\nDisease Control and Prevention,State Key Laboratory of Infectious\nDisease Prevention and Control, Changping, Changbai Road 155,\nBeijing, Beijing city 102206, China.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SOAPdenovo v. version 2.0\nGenome Coverage :: 100x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 21:44:52\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,279\nCDSs (total) :: 2,205\nGenes (coding) :: 2,104\nCDSs (with protein) :: 2,104\nGenes (RNA) :: 74\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 58\nncRNAs :: 4\nPseudo Genes (total) :: 101\nCDSs (without protein) :: 101\nPseudo Genes (ambiguous residues) :: 0 of 101\nPseudo Genes (frameshifted) :: 72 of 101\nPseudo Genes (incomplete) :: 41 of 101\nPseudo Genes (internal stop) :: 21 of 101\nPseudo Genes (multiple problems) :: 31 of 101\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_000947694.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
zonular occludens toxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_001893498.1