Skermanella rosea strain KEMB 2255-458 plasmid pSR-3, complete sequence.
Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Skermanella.
Submitted (28-OCT-2021) Bio Health Science, Changwon National University, Changwondaero, Changwon, Gyeongnam 51140, South Korea
Submitted (26-JAN-2021) Bio Health Science, Changwon National University, Changwondaero, Changwon, Gyeongnam 51140, South Korea
REFSEQ INFORMATION: The reference sequence is identical to\nCP086114.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. v0.4.9b\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 917.0x\nSequencing Technology :: Oxford Nanopore MinION; Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/27/2022 06:30:07\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 7,311\nCDSs (total) :: 7,224\nGenes (coding) :: 7,108\nCDSs (with protein) :: 7,108\nGenes (RNA) :: 87\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 61\nncRNAs :: 5\nPseudo Genes (total) :: 116\nCDSs (without protein) :: 116\nPseudo Genes (ambiguous residues) :: 0 of 116\nPseudo Genes (frameshifted) :: 24 of 116\nPseudo Genes (incomplete) :: 101 of 116\nPseudo Genes (internal stop) :: 10 of 116\nPseudo Genes (multiple problems) :: 17 of 116\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_015886728.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020721488.1
COORDINATES: similar to AA sequence:RefSeq:WP_013699889.1
COORDINATES: similar to AA sequence:RefSeq:WP_006725959.1
COORDINATES: similar to AA sequence:RefSeq:WP_006020129.1
branched-chain amino acid ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_011996087.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_012334374.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012334375.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011295818.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007593997.1
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: protein motif:HMM:NF019351.2
GO:0005507 - copper ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: similar to AA sequence:RefSeq:WP_011239624.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:NF015478.2
COORDINATES: similar to AA sequence:RefSeq:WP_019462560.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011299406.1
GO:0016813 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010488741.1
NCS1 family nucleobase:cation symporter-1
COORDINATES: protein motif:HMM:NF012296.2
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF014037.2
COORDINATES: similar to AA sequence:RefSeq:WP_015188463.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014199473.1
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: protein motif:HMM:NF021621.2
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013850352.1
winged helix-turn-helix domain-containing tetratricopeptide repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_004566360.1
COORDINATES: similar to AA sequence:RefSeq:WP_002611493.1
COORDINATES: similar to AA sequence:RefSeq:WP_007994687.1
COORDINATES: similar to AA sequence:RefSeq:WP_020562911.1
COORDINATES: protein motif:HMM:NF018960.2
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: similar to AA sequence:RefSeq:WP_019916547.1
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016201850.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242536.1
COORDINATES: protein motif:HMM:NF020137.2
GO:0005615 - extracellular space [Evidence IEA]
GO:0005509 - calcium ion binding [Evidence IEA]
M10 family metallopeptidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014240280.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: protein motif:HMM:NF025013.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189261.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189260.1
nitrate reductase cytochrome c-type subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011331398.1
GO:0009325 - nitrate reductase complex [Evidence IEA]
GO:0008940 - nitrate reductase activity [Evidence IEA]
GO:0042126 - nitrate metabolic process [Evidence IEA]
periplasmic nitrate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006394232.1
COORDINATES: similar to AA sequence:RefSeq:WP_011497028.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018302964.1
COORDINATES: protein motif:HMM:NF019113.2
COORDINATES: similar to AA sequence:RefSeq:WP_017082619.1
COORDINATES: similar to AA sequence:RefSeq:WP_013913371.1
COORDINATES: similar to AA sequence:RefSeq:WP_018644307.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019534410.1
COORDINATES: similar to AA sequence:RefSeq:WP_017979641.1
COORDINATES: protein motif:HMM:NF021778.2
COORDINATES: similar to AA sequence:RefSeq:WP_015897066.1
COORDINATES: similar to AA sequence:RefSeq:WP_007088443.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_007088444.1
COORDINATES: similar to AA sequence:RefSeq:WP_014085568.1
COORDINATES: similar to AA sequence:RefSeq:WP_008888843.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242566.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002632301.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016735668.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011565801.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019463205.1
COORDINATES: similar to AA sequence:RefSeq:WP_019461879.1
COORDINATES: protein motif:HMM:NF016291.2
COORDINATES: similar to AA sequence:RefSeq:WP_019995915.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249313.1
COORDINATES: similar to AA sequence:RefSeq:WP_019460998.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014241756.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015950218.1
COORDINATES: similar to AA sequence:RefSeq:WP_012335258.1
GO:0015299 - solute:proton antiporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_015923186.1
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: similar to AA sequence:RefSeq:WP_013640188.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007422584.1
GO:0050129 - N-formylglutamate deformylase activity [Evidence IEA]
GO:0019557 - histidine catabolic process to glutamate and formate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017499178.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019403520.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189116.1
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_010910113.1
winged helix DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013894140.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010915118.1
COORDINATES: similar to AA sequence:RefSeq:WP_013342584.1
COORDINATES: similar to AA sequence:RefSeq:WP_007197734.1
COORDINATES: similar to AA sequence:RefSeq:WP_009540341.1
COORDINATES: protein motif:HMM:NF025052.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242444.1
COORDINATES: similar to AA sequence:RefSeq:WP_008968655.1
COORDINATES: similar to AA sequence:RefSeq:WP_011684765.1
COORDINATES: similar to AA sequence:RefSeq:WP_012565993.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: similar to AA sequence:RefSeq:WP_015319160.1
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_012335068.1
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197973.1
COORDINATES: protein motif:HMM:TIGR02866.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566003.1
COORDINATES: similar to AA sequence:RefSeq:WP_013169007.1
COORDINATES: similar to AA sequence:RefSeq:WP_003504349.1
COORDINATES: similar to AA sequence:RefSeq:WP_015433837.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: protein motif:HMM:NF012720.2
COORDINATES: similar to AA sequence:RefSeq:WP_004421720.1
heme-copper oxidase subunit III family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011870635.1
cytochrome C oxidase subunit IV family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003604449.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019654230.1
COORDINATES: similar to AA sequence:RefSeq:WP_015927234.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009494612.1
COORDINATES: similar to AA sequence:RefSeq:WP_012236801.1
phytanoyl-CoA dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015235827.1
COORDINATES: similar to AA sequence:RefSeq:WP_003528950.1
COORDINATES: similar to AA sequence:RefSeq:WP_018182761.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008758960.1
COORDINATES: similar to AA sequence:RefSeq:WP_007179643.1
COORDINATES: similar to AA sequence:RefSeq:WP_015314339.1
HipA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013832891.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014248848.1
COORDINATES: similar to AA sequence:RefSeq:WP_012972983.1
COORDINATES: similar to AA sequence:RefSeq:WP_000247046.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611121.1
COORDINATES: protein motif:HMM:NF017496.2
COORDINATES: similar to AA sequence:RefSeq:WP_006314360.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015004256.1
COORDINATES: similar to AA sequence:RefSeq:WP_014854114.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
thiamine pyrophosphate-requiring protein
COORDINATES: similar to AA sequence:RefSeq:WP_009541859.1
glutathione-dependent formaldehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_007439005.1
COORDINATES: similar to AA sequence:RefSeq:WP_014238707.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:TIGR02451.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00831.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006885 - regulation of pH [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978538.1
COORDINATES: similar to AA sequence:RefSeq:WP_007610304.1
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004670545.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_011654624.1
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: similar to AA sequence:RefSeq:WP_009735636.1
COORDINATES: similar to AA sequence:RefSeq:WP_018182797.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012591424.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0004783 - sulfite reductase (NADPH) activity [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018436222.1
GO:0009337 - sulfite reductase complex (NADPH) [Evidence IEA]
GO:0004783 - sulfite reductase (NADPH) activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
assimilatory sulfite reductase (NADPH) flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012249952.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014199625.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977333.1
COORDINATES: protein motif:HMM:NF040453.1
COORDINATES: similar to AA sequence:RefSeq:WP_004319055.1
COORDINATES: similar to AA sequence:RefSeq:WP_018273947.1
COORDINATES: similar to AA sequence:RefSeq:WP_007003566.1
COORDINATES: similar to AA sequence:RefSeq:WP_012041675.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011811542.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188636.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193777.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019644742.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017940086.1
COORDINATES: protein motif:HMM:NF013487.2
COORDINATES: similar to AA sequence:RefSeq:WP_012334629.1
COORDINATES: protein motif:HMM:NF015912.2
COORDINATES: protein motif:HMM:NF025082.2
COORDINATES: similar to AA sequence:RefSeq:WP_014247579.1
COORDINATES: similar to AA sequence:RefSeq:WP_018182996.1
COORDINATES: similar to AA sequence:RefSeq:WP_011653789.1
COORDINATES: similar to AA sequence:RefSeq:WP_017962366.1
COORDINATES: similar to AA sequence:RefSeq:WP_008835841.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448475.1
COORDINATES: similar to AA sequence:RefSeq:WP_008835843.1
COORDINATES: similar to AA sequence:RefSeq:WP_008835845.1
COORDINATES: similar to AA sequence:RefSeq:WP_007855519.1
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF019421.2
type II toxin-antitoxin system HipA family toxin
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_003604144.1
COORDINATES: similar to AA sequence:RefSeq:WP_009721539.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247675.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012977283.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018316873.1
COORDINATES: similar to AA sequence:RefSeq:WP_010660564.1
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_007586395.1
GO:0018659 - 4-hydroxybenzoate 3-monooxygenase activity [Evidence IEA]
GO:0018874 - benzoate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198975.1
COORDINATES: similar to AA sequence:RefSeq:WP_019451447.1
sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF033564.0
COORDINATES: similar to AA sequence:RefSeq:WP_015242730.1
COORDINATES: similar to AA sequence:RefSeq:WP_019364566.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020291306.1
COORDINATES: similar to AA sequence:RefSeq:WP_012702325.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_012331265.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977683.1
GO:0047472 - 3-carboxy-cis,cis-muconate cycloisomerase activity [Evidence IEA]
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
3-carboxy-cis,cis-muconate cycloisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_008952948.1
GO:0047570 - 3-oxoadipate enol-lactonase activity [Evidence IEA]
GO:0042952 - beta-ketoadipate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014087559.1
GO:0047575 - 4-carboxymuconolactone decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012247279.1
GO:0018578 - protocatechuate 3,4-dioxygenase activity [Evidence IEA]
GO:0046278 - 3,4-dihydroxybenzoate metabolic process [Evidence IEA]
protocatechuate 3,4-dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007673874.1
protocatechuate 3,4-dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014200000.1
COORDINATES: similar to AA sequence:RefSeq:WP_015928984.1
COORDINATES: similar to AA sequence:RefSeq:WP_012702326.1
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF012437.2
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: similar to AA sequence:RefSeq:WP_019014505.1
COORDINATES: similar to AA sequence:RefSeq:WP_008943784.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012700742.1
COORDINATES: similar to AA sequence:RefSeq:WP_005848949.1
FadR/GntR family transcriptional regulator
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: similar to AA sequence:RefSeq:WP_013396119.1
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: similar to AA sequence:RefSeq:WP_013541041.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_014787495.1
COORDINATES: similar to AA sequence:RefSeq:WP_012680606.1
COORDINATES: similar to AA sequence:RefSeq:WP_012431148.1
COORDINATES: similar to AA sequence:RefSeq:WP_013479554.1
COORDINATES: similar to AA sequence:RefSeq:WP_016500154.1
COORDINATES: similar to AA sequence:RefSeq:WP_009806428.1
COORDINATES: similar to AA sequence:RefSeq:WP_003985102.1
COORDINATES: similar to AA sequence:RefSeq:WP_008738980.1
COORDINATES: similar to AA sequence:RefSeq:WP_017233036.1
COORDINATES: similar to AA sequence:RefSeq:WP_009828766.1
COORDINATES: similar to AA sequence:RefSeq:WP_006746735.1
VapC toxin family PIN domain ribonuclease
COORDINATES: protein motif:HMM:TIGR02595.1
PEP-CTERM sorting domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018749065.1
COORDINATES: similar to AA sequence:RefSeq:WP_008963551.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014241741.1
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011996142.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_011580031.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_014241746.1
COORDINATES: similar to AA sequence:RefSeq:WP_008876097.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013641306.1
COORDINATES: protein motif:HMM:NF013853.2
COORDINATES: similar to AA sequence:RefSeq:WP_012972856.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978628.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612308.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009629898.1
COORDINATES: similar to AA sequence:RefSeq:WP_010336922.1
COORDINATES: similar to AA sequence:RefSeq:WP_008985258.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_009551666.1
COORDINATES: similar to AA sequence:RefSeq:WP_008940327.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433722.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007349479.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018390260.1
COORDINATES: similar to AA sequence:RefSeq:WP_014745602.1
COORDINATES: similar to AA sequence:RefSeq:WP_006610598.1
COORDINATES: similar to AA sequence:RefSeq:WP_020093097.1
COORDINATES: similar to AA sequence:RefSeq:WP_011473460.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]; GO:0033219 - urea binding [Evidence IEA]
GO:0015840 - urea transport [Evidence IEA]
urea ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020093099.1
COORDINATES: similar to AA sequence:RefSeq:WP_020093100.1
COORDINATES: similar to AA sequence:RefSeq:WP_012320261.1
COORDINATES: similar to AA sequence:RefSeq:WP_013168011.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
urea ABC transporter ATP-binding subunit UrtE
COORDINATES: similar to AA sequence:RefSeq:WP_015499591.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018457365.1
COORDINATES: similar to AA sequence:RefSeq:WP_010598956.1
COORDINATES: similar to AA sequence:RefSeq:WP_007350173.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973103.1
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188026.1
COORDINATES: similar to AA sequence:RefSeq:WP_007818023.1
zinc ABC transporter ATP-binding protein AztA
COORDINATES: similar to AA sequence:RefSeq:WP_006216406.1
COORDINATES: protein motif:HMM:NF020431.2
COORDINATES: similar to AA sequence:RefSeq:WP_016349998.1
COORDINATES: similar to AA sequence:RefSeq:WP_010626315.1
COORDINATES: similar to AA sequence:RefSeq:WP_015886729.1