Sphingomonas naphthae strain KACC 18716 plasmid unnamed4, complete sequence.
type: Entry
definition: Sphingomonas naphthae strain KACC 18716 plasmid unnamed4, complete sequence.
sequence version: NZ_CP117415.1
sequence date: 2023-02-16
sequence: sequence
division: CON
label: NZ_CP117415.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN33038042
keyword: RefSeq
source: Sphingomonas naphthae
organism: Sphingomonas naphthae
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP117415.1.\nBacteria and source DNA available from Korean Agricultural Culture\nCollection (KACC).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HiFiasm v. 0.16.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 542.0x\nSequencing Technology :: PacBio Sequel; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/13/2023 19:21:37\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,196\nCDSs (total) :: 4,140\nGenes (coding) :: 4,102\nCDSs (with protein) :: 4,102\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 38\nCDSs (without protein) :: 38\nPseudo Genes (ambiguous residues) :: 0 of 38\nPseudo Genes (frameshifted) :: 14 of 38\nPseudo Genes (incomplete) :: 25 of 38\nPseudo Genes (internal stop) :: 4 of 38\nPseudo Genes (multiple problems) :: 5 of 38\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 24142
topology: circular
so has quality: SO_0000988
location: 1..24142
location: region:1-24142:1
RO_0002162: 1813468

NZ_CP117415
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN33038042
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of Sphingomonas naphthae
author: Kim, S.
author: Heo, J.
author: Kwon, S.-W.
journal: Unpublished

2
title: Direct Submission
author: Kim, S.
author: Heo, J.
author: Kwon, S.-W.
journal: Submitted (02-FEB-2023) Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration, 166, Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24142:1
position: 24142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24142:1:source
so part of: sequence
organism: Sphingomonas naphthae
mol type: genomic DNA
strain: KACC 18716
isolation source: Oil contaminated soil
type material: type strain of Sphingomonas naphthae
plasmid: unnamed4
country: South Korea: Jeollabuk-do, Gunsan-si
collection date: 2018

1813468
type: Taxonomy
SIO_000068: taxonomy

PQ455_RS20860
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20860
old locus tag: PQ455_20860
so part of: sequence
location: join(23805..24142,1..178)
location: region:1-24142:1
so has part: feature:23805-24142:1:exon
so has part: feature:1-178:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:23805-24142:1:exon

position:23805:1
position: 23805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-178:1:exon

position:178:1
position: 178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PQ455_RS20860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20860
old locus tag: PQ455_20860
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHYVFDVIVLFARGVPIVKHTFAILIGGAAILASCTPSSQSEAPPPEVKKTSSAGLGPSAAPKNLPAFAVNELANGLIPAAPQMGRLSVRNDCIVFTMRDSDATPLWPAGSTIEQHDDALIIRVEGGASYRVPSATTIAGAFVPLNSVNMTKFSKPLPERCPSAIFAVARQ
SIO_010081: PQ455_RS20860
subclass of: SO_0000673
so part of: PQ455_RS20860
location: join(23805..24142,1..178)
location: region:1-24142:1
so has part: feature:23805-24142:1:exon
so has part: feature:1-178:1:exon

WP_125458962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23805-24142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-178:1:exon

PQ455_RS20865
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20865
old locus tag: PQ455_20865
so part of: sequence
location: 188..1471
location: region:188-1471:1
so has part: feature:188-1471:1:exon
subclass of: SO_0000010

position:188:1
position: 188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471:1
position: 1471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188-1471:1:exon

PQ455_RS20865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20865
old locus tag: PQ455_20865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTRLVIVLLAAAAHPALAQQEVPAPAAPPAAPAGAAGSSPAAQFLADQYGISLAEATERAQLQDAIAELVAQVKRDNDSELGSIWVEHTPVFRINISYVTPDDRKLVKYRIDPKIRRYVKLVKAKKSRAEAEAGATEIFKTIEGSGIRDFAGYVEEDSGDVVLELPSNDMKQRVLNLIGSKRQNIRVVVKPIAKPTAGPIGVVSGDYIEGGHYFWQQRASDEASKGCTVAFQATYQGRLGILTAGHCNPGPEGTGYWHAVNGHWVEIPAPAIARWAYGTKYDFQWHDITGYSRSNAIYYFNQASVVGLPKSGWVRVNGTVGYYGQTKGMVSCKSGRVTGITCGAITSGNYYYNGANGWIRVFRASGQHLGRTGDSGSAVFSDAAQSTQVKAYGILTAAQAFSDGSSEMVYSPIDYIDPWGISLLTQ
SIO_010081: PQ455_RS20865
subclass of: SO_0000673
so part of: PQ455_RS20865
location: 188..1471
location: region:188-1471:1
so has part: feature:188-1471:1:exon

WP_044663645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188-1471:1:exon

PQ455_RS20870
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20870
old locus tag: PQ455_20870
so part of: sequence
location: complement(2287..2907)
location: region:2287-2907:-1
so has part: feature:2287-2907:-1:exon
subclass of: SO_0000010

position:2287:-1
position: 2287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907:-1
position: 2907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2287-2907:-1:exon

PQ455_RS20870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20870
old locus tag: PQ455_20870
EC number: 3.1.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004213387.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine phosphatase family protein
translation: MRVIFIRHGESTGNAGVPCNDLATIALTERGHEQAREVAASWTQAPALIVTSPYTRTQQTAAPTIARFPGVPVEVWPIEEFTYLQPARWNGTRSAERMPHLERYWSAADPDYCDGEGAESFATLLRRCKTGLDRLAAMPAGSLVYVFGHGQFIQAARAIVADAHLDDRAKMRVFWRKGEPPAISNAQRVEFHWQGGRWECASAFTA
SIO_010081: PQ455_RS20870
subclass of: SO_0000673
so part of: PQ455_RS20870
location: complement(2287..2907)
location: region:2287-2907:-1
so has part: feature:2287-2907:-1:exon

WP_044663646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2287-2907:-1:exon

PQ455_RS20875
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20875
old locus tag: PQ455_20875
so part of: sequence
location: complement(2910..3230)
location: region:2910-3230:-1
so has part: feature:2910-3230:-1:exon
subclass of: SO_0000010

position:2910:-1
position: 2910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3230:-1
position: 3230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2910-3230:-1:exon

PQ455_RS20875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20875
old locus tag: PQ455_20875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007685988.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MPSTKKPASSKRASFPREASYEKRFVKDWERLSRSGRYNMKQLKEAMMMLIANDAPLGPEWLDHPLKGDWSDHRECHIGGDFLLIYTIEGNLVNFVRAGTHAELFE
SIO_010081: PQ455_RS20875
subclass of: SO_0000673
so part of: PQ455_RS20875
location: complement(2910..3230)
location: region:2910-3230:-1
so has part: feature:2910-3230:-1:exon

WP_044663647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2910-3230:-1:exon

PQ455_RS20880
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20880
old locus tag: PQ455_20880
so part of: sequence
location: complement(3199..3480)
location: region:3199-3480:-1
so has part: feature:3199-3480:-1:exon
subclass of: SO_0000010

position:3199:-1
position: 3199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3480:-1
position: 3480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3199-3480:-1:exon

PQ455_RS20880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20880
old locus tag: PQ455_20880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017503755.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAATAFVRARIDETVKDEAAAVLAELGLTVSDVVRMTLTRVAKDHALPFELKVPNAETRAAIEASRATMKARRARFTDAQEMFDALDQEARQQ
SIO_010081: PQ455_RS20880
subclass of: SO_0000673
so part of: PQ455_RS20880
location: complement(3199..3480)
location: region:3199-3480:-1
so has part: feature:3199-3480:-1:exon

WP_044663648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3199-3480:-1:exon

PQ455_RS20885
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20885
old locus tag: PQ455_20885
so part of: sequence
location: 3894..4535
location: region:3894-4535:1
so has part: feature:3894-4535:1:exon
subclass of: SO_0000010

position:3894:1
position: 3894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4535:1
position: 4535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3894-4535:1:exon

PQ455_RS20885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20885
old locus tag: PQ455_20885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013041576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation protein SprT
translation: MTHQTRESWLNAVALGMAPLFEALDAPLPDRVRVAIGFTSRGAKGKAIGECWDNRLSADGHFEIFIRPDLAHAPDAMPSQIAAILAHELVHAAVGIPAGHGKAFKRVALGLGLVGPMRATTPGEAFLAAVAPILDAVGPLPHARLDTDGESTAPKKQKTRMLKCECATCGYTVRTARKWLEQAGAPLCPIEDHGQMSHEPLDDDSEDEGGKDS
SIO_010081: PQ455_RS20885
subclass of: SO_0000673
so part of: PQ455_RS20885
location: 3894..4535
location: region:3894-4535:1
so has part: feature:3894-4535:1:exon

WP_044663649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3894-4535:1:exon

PQ455_RS20890
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20890
old locus tag: PQ455_20890
so part of: sequence
location: 4633..5286
location: region:4633-5286:1
so has part: feature:4633-5286:1:exon
subclass of: SO_0000010

position:4633:1
position: 4633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5286:1
position: 5286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4633-5286:1:exon

PQ455_RS20890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20890
old locus tag: PQ455_20890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012554518.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MPTIAIISQKGGAGKTTLALHLAAAAEDSGHTALVIDLDPQATASQWAAWRQDAPPVVIDSAPPRLAAKIEQATGQGAAFIVIDTPPHADSAASAAVEAADLVLIPCRPSAFDLAAIKTTASLVKMRGKPAFVIFTAGSPTAPRMYDEAAQLVQDYGLDACPHHIADRAAFRHAAAEGKTAMEIEPNGKAADEVRQLYKWTCQHVNMQASKKRRASA
SIO_010081: PQ455_RS20890
subclass of: SO_0000673
so part of: PQ455_RS20890
location: 4633..5286
location: region:4633-5286:1
so has part: feature:4633-5286:1:exon

WP_044663650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4633-5286:1:exon

PQ455_RS20895
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20895
old locus tag: PQ455_20895
so part of: sequence
location: 5283..5600
location: region:5283-5600:1
so has part: feature:5283-5600:1:exon
subclass of: SO_0000010

position:5283:1
position: 5283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5600:1
position: 5600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5283-5600:1:exon

PQ455_RS20895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20895
old locus tag: PQ455_20895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013041578.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSRKGSLLALRDRDAAPSSATAEPEGRAAAPIARSSGTGTGSGSSSSPVAPSRQGKKAMTGYFSPEMSFAMHMTARKHGMSLQDAMAEAFNDWLRKMGESPVGK
SIO_010081: PQ455_RS20895
subclass of: SO_0000673
so part of: PQ455_RS20895
location: 5283..5600
location: region:5283-5600:1
so has part: feature:5283-5600:1:exon

WP_044663651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5283-5600:1:exon

PQ455_RS20900
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20900
old locus tag: PQ455_20900
so part of: sequence
location: 5641..6000
location: region:5641-6000:1
so has part: feature:5641-6000:1:exon
subclass of: SO_0000010

position:5641:1
position: 5641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6000:1
position: 6000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5641-6000:1:exon

PQ455_RS20900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20900
old locus tag: PQ455_20900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVLILSAIFVLVMIGLSIRANARFRQEKTLPMQWRLSRSEPLARSVNWSAPRVVALSFTPSLAIGVLALFNVAAMTMTPRPGQEGMLFPSLIFIGSMFVAAHVFHLRLIEKTLSRSGS
SIO_010081: PQ455_RS20900
subclass of: SO_0000673
so part of: PQ455_RS20900
location: 5641..6000
location: region:5641-6000:1
so has part: feature:5641-6000:1:exon

WP_157009904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5641-6000:1:exon

PQ455_RS20905
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20905
old locus tag: PQ455_20905
so part of: sequence
location: 6162..6380
location: region:6162-6380:1
so has part: feature:6162-6380:1:exon
subclass of: SO_0000010

position:6162:1
position: 6162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6380:1
position: 6380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6162-6380:1:exon

PQ455_RS20905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20905
old locus tag: PQ455_20905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNKANDNGTDPFYSKVMADSGAVVSGGAALLVRAKARGGPSNIIRDAIEVALEKANEAVHQQRRSKIKLVR
SIO_010081: PQ455_RS20905
subclass of: SO_0000673
so part of: PQ455_RS20905
location: 6162..6380
location: region:6162-6380:1
so has part: feature:6162-6380:1:exon

WP_044663653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6162-6380:1:exon

PQ455_RS20910
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20910
old locus tag: PQ455_20910
so part of: sequence
location: complement(6427..7539)
location: region:6427-7539:-1
so has part: feature:6427-7539:-1:exon
subclass of: SO_0000010

position:6427:-1
position: 6427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7539:-1
position: 7539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6427-7539:-1:exon

PQ455_RS20910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20910
old locus tag: PQ455_20910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008832586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTIDPAPSLFDAPIAAPSSAVDGDDRTPLLPVRHPNQDLFICDVLDAIPKDDMASMEHPVFSLSTKPDNRMRRYEHNGNVIEIIPSGKGLATIHDKDILIYCISQLVAKMNQGEQPSRTVRLQAYDMLVATNRQTSGEGYRLMADALTRLRGTTVRTNIQTGGVEETRIFGLIEEARITRKTFDGRMLDLEITLSDWVYRSVISKNVLTLHRDYFRLRKPFERRMYELARKHCGVKDEWKIGLELLQKKCGSNSPLRVFRALVKKVCEHDADHGHFPDYAVTMDDDVILFRNRSGLKSKPDPVASASDDAPYIDPETMHDAKTAAPGYDVYALYDEWVSWWHDMGKPELKSPAGAFLGFCKKRHERKPLR
SIO_010081: PQ455_RS20910
subclass of: SO_0000673
so part of: PQ455_RS20910
location: complement(6427..7539)
location: region:6427-7539:-1
so has part: feature:6427-7539:-1:exon

WP_273692335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6427-7539:-1:exon

PQ455_RS20915
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20915
old locus tag: PQ455_20915
so part of: sequence
location: complement(8264..9922)
location: region:8264-9922:-1
so has part: feature:8264-9922:-1:exon
subclass of: SO_0000010

position:8264:-1
position: 8264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9922:-1
position: 9922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8264-9922:-1:exon

PQ455_RS20915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20915
old locus tag: PQ455_20915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339215.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MEWFRQLGRAIRNLSRIARQNPIWAITALVVSPIRLIRHLFAVLILFLAAGIVLGLGMPLILGKLFGLPHDSNLYQIIMMLTVIVVILIGLRALFQPLILAYGGPAADDTHGSARFATDAENRAYAGDSGLLIGRDRKTGRPLRYAGPAHLLTIAPTRTGKGVGTIIPNLLDYAGPVVCIDPKGENARITARHRGNFGPVHVLDPFGVTGIASAAFNPLDRIDPNSLDLADEAMTLADALVYDAPGEAGEAHWNEEAKALIAGIILSIVTSEPPATRTLATLRDRLTLAPRAFAATLESMQAQGGLAARAANRHLGKSDREGAGVLSAAQRHTHFLDSPRMSAVLGRSDFTFADVKAQATTVYLVLPPDRLATYARWLRLMLAQGLTDLARAPASPARPVLFLLDEFAALGRLEPVERAMGLMAGYGIQLWPILQDVHQLRALYERRAGTFLSNAGVLQIFGVNDHDSAKLVSDLLGQETVVFETMSRAIDSDETGISFGSQHVARPLLTPDEVRTLRDDLQLLFLAGQRPIVAAKLKYYADREFAGRFDKA
SIO_010081: PQ455_RS20915
subclass of: SO_0000673
so part of: PQ455_RS20915
location: complement(8264..9922)
location: region:8264-9922:-1
so has part: feature:8264-9922:-1:exon

WP_273692337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8264-9922:-1:exon

PQ455_RS20920
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20920
old locus tag: PQ455_20920
so part of: sequence
location: complement(9925..10188)
location: region:9925-10188:-1
so has part: feature:9925-10188:-1:exon
subclass of: SO_0000010

position:9925:-1
position: 9925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10188:-1
position: 10188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9925-10188:-1:exon

PQ455_RS20920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20920
old locus tag: PQ455_20920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339214.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDRVPRSWQLLMVGSGVHRISPDLWDRLVRLLDLSPQTRLIEIETDQGGVSVSRDWPSDKMEEVSAIEAEIQSTPGIIRMTMFQAS
SIO_010081: PQ455_RS20920
subclass of: SO_0000673
so part of: PQ455_RS20920
location: complement(9925..10188)
location: region:9925-10188:-1
so has part: feature:9925-10188:-1:exon

WP_273692340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9925-10188:-1:exon

PQ455_RS20925
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20925
old locus tag: PQ455_20925
so part of: sequence
location: complement(10181..10735)
location: region:10181-10735:-1
so has part: feature:10181-10735:-1:exon
subclass of: SO_0000010

position:10181:-1
position: 10181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10735:-1
position: 10735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10181-10735:-1:exon

PQ455_RS20925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20925
old locus tag: PQ455_20925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015449237.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MADRPDFHIITGGPGSGKTTLIDALAAQGFHHMPEAGRAIIRDQIAIGGGALPWADRGAFAELMLSWELRSWHEAHDRKGPVIFDRGVPDVSGYLRLCGLPVPSHVERAAEMFRYQRRVFIAPPWREIFGQDTERKQDFAEAQATYEAMVTVYADLGYELVSLPLAPVAERVRFVRARMWRVDD
SIO_010081: PQ455_RS20925
subclass of: SO_0000673
so part of: PQ455_RS20925
location: complement(10181..10735)
location: region:10181-10735:-1
so has part: feature:10181-10735:-1:exon

WP_010339213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10181-10735:-1:exon

PQ455_RS20930
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20930
old locus tag: PQ455_20930
so part of: sequence
location: complement(10728..10937)
location: region:10728-10937:-1
so has part: feature:10728-10937:-1:exon
subclass of: SO_0000010

position:10728:-1
position: 10728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10937:-1
position: 10937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10728-10937:-1:exon

PQ455_RS20930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20930
old locus tag: PQ455_20930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015449238.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MARRERTRHLIELGGLVQKAGLVELADDDRATLYGALLELAAKAREDGNALSLWKRRGKRAFDAEADDG
SIO_010081: PQ455_RS20930
subclass of: SO_0000673
so part of: PQ455_RS20930
location: complement(10728..10937)
location: region:10728-10937:-1
so has part: feature:10728-10937:-1:exon

WP_010339212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10728-10937:-1:exon

PQ455_RS20935
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20935
old locus tag: PQ455_20935
so part of: sequence
location: complement(10975..11283)
location: region:10975-11283:-1
so has part: feature:10975-11283:-1:exon
subclass of: SO_0000010

position:10975:-1
position: 10975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11283:-1
position: 11283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10975-11283:-1:exon

PQ455_RS20935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20935
old locus tag: PQ455_20935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004213370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MRKVRDYDAELKALGDKARALKAKKVQQLGELVTSTGADTLDADVLAGALLHIVAEAQAEGNREAWRSDGAAFFQGRGRKTGRRAGGSAEGGSEAGAGEAQA
SIO_010081: PQ455_RS20935
subclass of: SO_0000673
so part of: PQ455_RS20935
location: complement(10975..11283)
location: region:10975-11283:-1
so has part: feature:10975-11283:-1:exon

WP_010339211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10975-11283:-1:exon

PQ455_RS20940
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
gene: traA
locus tag: PQ455_RS20940
old locus tag: PQ455_20940
so part of: sequence
location: 11457..14390
location: region:11457-14390:1
so has part: feature:11457-14390:1:exon
subclass of: SO_0000010

position:11457:1
position: 11457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14390:1
position: 14390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11457-14390:1:exon

PQ455_RS20940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
gene: traA
locus tag: PQ455_RS20940
old locus tag: PQ455_20940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339210.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIYHFSAKVISRANGSSAVASAAYRAAERLHDDRLGRDHDFSNKAGVVHSEIMLSEGAPERLNDRTVLWNEVEAGEKRKDAQLAREVEFSIPRELDQKEGIRLAREFVEKQFVKRGMVADLNVHWDMGKDGQPKPHAHVMLSMREVGPEGFGQKVREWNSTALLQEWREAWADHVNERLAELDIDARIDHRTLEAQGIDLEPQHKIGPAASRMPEQGLEAERVEDHARIARENGEKIIANPQIALDAITRQQATFTRRDLAQFAFRHSDGKDQFDQVMSAVRSSPELVALGKDGRDQERFTSREMIAVEERLERAAGRLADRAGHGLPAASLQGGLNAAGSGGLTLGEDQRAALEHIGTSGDLAIVLGYAGTGKSAMLGVAREAWEREGYQVRGAALSGIAAENLEGGSGIASRTIASLEHAWGQGREQLGPRDVLVIDEAGMIGSRQMERVLSEAERAGAKVVLVGDPEQLQAIEAGAAFRSLAERHGTAEITEIRRQHEDWQRQATRALATGRTGEALHAYERQGMVRAADTREAARVELMDGWESGRQADPDKSRIILTHTNAEVQELNSEARSRMRAAGELGEGVGLSVERGRRDFATGDRIMFFRNDRGLGVKNGSLGTLERVSAEGMAVKMDDGRKVAFDLKDYAHVDHGYAATFHKSQGVTVDQAHVLATPGMDRHSAYVGLSRHRDSVQLHYGRDDFTDQRQLTRTLSRDRGKDMAGDYAAARDGQAQARAFAERREIRFPELAREIAGKVRDKARGMFAGFKPKPSSPELARDGKGGPINTTPERAPAAPSQARAIERYARAQADMDRMREKGLPVLPHQKQALAKAGDALDQVRPHAARDLASAFERNPVLVREAAEGKAGGAARAMAHEAQVRTNPELRADRFVERWQGMARERAELTRSGDREAAQRTGKKMESLAGTLHRDPQLESVLQRRAPELGLEMGRDRPISQELTRSLEIGRDRGLSR
SIO_010081: PQ455_RS20940
subclass of: SO_0000673
so part of: PQ455_RS20940
location: 11457..14390
location: region:11457-14390:1
so has part: feature:11457-14390:1:exon

WP_044663630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11457-14390:1:exon

PQ455_RS20945
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20945
old locus tag: PQ455_20945
so part of: sequence
location: 14400..15137
location: region:14400-15137:1
so has part: feature:14400-15137:1:exon
subclass of: SO_0000010

position:14400:1
position: 14400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15137:1
position: 15137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14400-15137:1:exon

PQ455_RS20945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20945
old locus tag: PQ455_20945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339209.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6118 family protein
translation: MADEEWEEGGDAAAEAFEQVRVAVEQQRGELALMRRAIEGLAAERASIDVPDYSETLGHVVQGLDGINGRLDQVTTAIVKSPALAMTPAQVSAQINRAAADLRSADHAALATATNEMKQQGRELRTVVQSALTARDQKNRQLWFGLGGLLIGILLWSFLPGMVAREIVPTSWQWPERMATRVLAEATPWDAGQHLMASASQPSWEAIVAADRLLRDNREKIEGCRQAARKADQPVRCTVQVGVKR
SIO_010081: PQ455_RS20945
subclass of: SO_0000673
so part of: PQ455_RS20945
location: 14400..15137
location: region:14400-15137:1
so has part: feature:14400-15137:1:exon

WP_273692290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14400-15137:1:exon

PQ455_RS20950
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20950
old locus tag: PQ455_20950
so part of: sequence
location: 15137..15406
location: region:15137-15406:1
so has part: feature:15137-15406:1:exon
subclass of: SO_0000010

position:15406:1
position: 15406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15137-15406:1:exon

PQ455_RS20950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20950
old locus tag: PQ455_20950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339208.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1971 domain-containing protein
translation: MTIPYRSTPIFDEATLPTALRSEHRTKAGVWGVIRVIEGRLKLTYLDPASEVILTPDRPGLVLPEQPHFVEPLGAMRMQVDFYDQRPSL
SIO_010081: PQ455_RS20950
subclass of: SO_0000673
so part of: PQ455_RS20950
location: 15137..15406
location: region:15137-15406:1
so has part: feature:15137-15406:1:exon

WP_046990358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15137-15406:1:exon

PQ455_RS20955
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20955
old locus tag: PQ455_20955
so part of: sequence
location: 15415..16710
location: region:15415-16710:1
so has part: feature:15415-16710:1:exon
subclass of: SO_0000010

position:15415:1
position: 15415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16710:1
position: 16710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15415-16710:1:exon

PQ455_RS20955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20955
old locus tag: PQ455_20955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017501674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serpin family protein
translation: MRKAALSFPFLVSLALGGCVTSAPAPNFGPSPSGQSERSGEITPWALTYGAALMTAKVYPHLAATADANANLFVSPVSLSQGLGLAYLGARGGTRDEIGRVLDWPSVPNAAVPIRAYNAQLSDTGDADITLGIANALWLAKGLPIRDEYVAEARSGFGAAPETVDYAGDPTGAAARINGWVSRETKGRISEIVSPSGFRDDTAAVLTNALYFKAKWQVPFEETETRTFTRGDGTRIPITMMKRIGRFDYRETHEGQAIALPYAGDGSFVMEIFLPRDTAVLRRWEREMKGGDFFAGEQGGNDRFDLAAEQAREMRIILPRFEARFDKSVKAALIAAGMPSAFDQQRADLSGIVSGVRLAINDVAHATFLRVDEEGTEAAAATAVKIVVTSARIEPQVPEMVVDRPFLATLRDRKSGAVLFFGRIADPTAIP
SIO_010081: PQ455_RS20955
subclass of: SO_0000673
so part of: PQ455_RS20955
location: 15415..16710
location: region:15415-16710:1
so has part: feature:15415-16710:1:exon

WP_273692298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15415-16710:1:exon

PQ455_RS20960
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20960
old locus tag: PQ455_20960
so part of: sequence
location: complement(16994..19960)
location: region:16994-19960:-1
so has part: feature:16994-19960:-1:exon
subclass of: SO_0000010

position:16994:-1
position: 16994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19960:-1
position: 19960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16994-19960:-1:exon

PQ455_RS20960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20960
old locus tag: PQ455_20960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018250482.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MARRDLLTGDERRALFGVPLDHASLAKHYTVADEDRPLIEAKRGDANRLGFALHLALLRHPGFGIRHDDVVPDFLIRHLAAQLDIAPTAFEGYAHRAQTRLEHAWEAMERLRLRAFEAADVPGALGAATRAAEATERGKPIAAAVLGHLRAARIVLPAPARIERIGVAGRAMARRLAADTLVDALAPEQVTGLDALLIVDQDRSTTPLAWLRDTSDSPTARNLAGILARLAHVRRLGLDPGMAGRIHEHRFEQLVREGHVAPAFLLSDYSLRRRRATLAAAVIDLEARLADAAIEMFGKQTGLLFARARAAQKRGIEATTRDVNRLMRLLGATVGALRVAREDGLDVWAALDDGVGWTRLLDAESEATAIADLTRDEPLIRAAGRYMTMRRYAPAFFDAFRFKAAGSRDGVLGAIKVVRALNATGRRDVPADAPMPFSRKWKAAITEGGVIDRRRYETATVATVRERLQSGDLWVEGTREHLRFDSYMLPPGKAAEIALTLPFDTDVSRYLEGRARLLDWRLRRFAGSLKRGTLDGVELRGGNLRVSPLAAVTPAAADRLDAAVDRLMPRVRITELLAEVEARTGFLCAFPELRSGRAHSNPQAVLAAILADATNLGIERMANASQGVTYAQLAWTHGWYVSEENYAAGLRHLVDAQAALPLTRVWGDGTASSSDGQFFRSGRRGAAGSTNARYDREPGQKIYAHVADTYAPYHVRLISATAAEAPYVLDGLVAHGCGIEPATHYADTGGASDHVFALAHLLGFRFVPRLRDLADRRLGLFPGTARPEALAKLIGRPFNIAAIRESWDEIVRLAASVKAGVVLPSVMLKKLAAYRRQNRLDFALQELGRIERTLFTLDWLESRALRQQCQAGLNKGEARHTLAQAVFVHKQGRLRDPQFENQALKASGLTLVTAAIVYWNTLYMGRAVEHLRASGEPAPDELLAHVAPLGWRHISLTGDYLWQNAAAELDQDGYRALNIAGGPGAKVA
SIO_010081: PQ455_RS20960
subclass of: SO_0000673
so part of: PQ455_RS20960
location: complement(16994..19960)
location: region:16994-19960:-1
so has part: feature:16994-19960:-1:exon

WP_273691757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16994-19960:-1:exon

PQ455_RS20965
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20965
old locus tag: PQ455_20965
so part of: sequence
location: complement(20124..20696)
location: region:20124-20696:-1
so has part: feature:20124-20696:-1:exon
subclass of: SO_0000010

position:20124:-1
position: 20124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20696:-1
position: 20696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20124-20696:-1:exon

PQ455_RS20965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20965
old locus tag: PQ455_20965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004212865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKIGYARVSTAEQNLDLQRDALKAAGCEKVITDKASGATAARPGLEKVKELLRAGDTLVVWRLDRLGRSLRDLIGWMTYLDEEKVGLLSLHEAIDTTTTSGKLTFHLFGALAEFERNLIRERTQAGLTAARARGKKGGRPAALGKDKRDLAVRLYHENTMPIAKICSMLGISKPTLYAYVRSAETKPVAA
SIO_010081: PQ455_RS20965
subclass of: SO_0000673
so part of: PQ455_RS20965
location: complement(20124..20696)
location: region:20124-20696:-1
so has part: feature:20124-20696:-1:exon

WP_007407197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20124-20696:-1:exon

PQ455_RS20970
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20970
old locus tag: PQ455_20970
so part of: sequence
location: 20888..22288
location: region:20888-22288:1
so has part: feature:20888-22288:1:exon
subclass of: SO_0000010

position:20888:1
position: 20888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22288:1
position: 22288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20888-22288:1:exon

PQ455_RS20970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20970
old locus tag: PQ455_20970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004212864.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mu transposase C-terminal domain-containing protein
translation: MTHPALVPPLAIERYRVLEPHLADGIPLADLARTGTLSERTLQRWLGRYRAEGLAGLARLPRNDRGRLHLPEHLVELTRTLATKRPRPPVAAIHRKVQELAIAHGHRTPSYAAVARVVRAIPASQIAAASDPAVYRDQHELVHRREAATSNEMWQADHTVLDILVLDDAGTPVRPWLTVIVDDHSRAIAGYFLSLDAPSALNTALALRQAIWRKPNPEWIVSGIPEQLYVDNGSDFISEHIEQACIALKIRLIHSLPGRPRGRGKIERLFRTINDMFLPDLPGHLIAGKPLSAPVLTLDELRARFEAFVCGVYHRRPHGSTGEPPITRWQKGGFLPAMPDSLEQLDMLLVHVPKPRKVLRDGIRLMGRRYVEPTLAAFVGEQVEAVYDPRDLTEIHVYHQGRFVCRALSSEHAGHPSLRAIQRARRGAKERDKQVPAPTETFDGDQEDTASRPTTYRGLRLYAADD
SIO_010081: PQ455_RS20970
subclass of: SO_0000673
so part of: PQ455_RS20970
location: 20888..22288
location: region:20888-22288:1
so has part: feature:20888-22288:1:exon

WP_004212864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20888-22288:1:exon

PQ455_RS20975
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20975
old locus tag: PQ455_20975
so part of: sequence
location: 22215..22844
location: region:22215-22844:1
so has part: feature:22215-22844:1:exon
subclass of: SO_0000010

position:22215:1
position: 22215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22844:1
position: 22844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22215-22844:1:exon

PQ455_RS20975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20975
old locus tag: PQ455_20975
inference: COORDINATES: protein motif:HMM:NF024793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MATKRIRLPGPPPTEGSGSTPLTIEFLVEQPFLATREHARFVEFAEACAHYRYIGVCHGRPGVGKTRSAREFSSFPDLGEYAALRPIAALLGEKVARCRAVFYTVSVSNTPKTIDAVLGLNLIKLGYARLTVAGGSQDEITHDAARIACPLVIVDEADRLTIKSLEHLRDMADRHGFGLILMGMPGLEKRLARYAQLYSRIGSRRCGGS
SIO_010081: PQ455_RS20975
subclass of: SO_0000673
so part of: PQ455_RS20975
location: 22215..22844
location: region:22215-22844:1
so has part: feature:22215-22844:1:exon

WP_273692300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22215-22844:1:exon

PQ455_RS20980
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20980
old locus tag: PQ455_20980
pseudo: true
so part of: sequence
location: <22971..23510
location: region:22971-23510:1
so has part: feature:22971-23510:1:exon
subclass of: SO_0000010

position:22971:1
position: 22971
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:23510:1
position: 23510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22971-23510:1:exon

PQ455_RS20980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20980
old locus tag: PQ455_20980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339226.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: PQ455_RS20980
subclass of: SO_0000673
so part of: PQ455_RS20980
location: <22971..23510
location: region:22971-23510:1
so has part: feature:22971-23510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22971-23510:1:exon