Sphingomonas naphthae strain KACC 18716 plasmid unnamed3, complete sequence.
type: Entry
definition: Sphingomonas naphthae strain KACC 18716 plasmid unnamed3, complete sequence.
sequence version: NZ_CP117414.1
sequence date: 2023-02-16
sequence: sequence
division: CON
label: NZ_CP117414.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN33038042
keyword: RefSeq
source: Sphingomonas naphthae
organism: Sphingomonas naphthae
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP117414.1.\nBacteria and source DNA available from Korean Agricultural Culture\nCollection (KACC).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HiFiasm v. 0.16.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 542.0x\nSequencing Technology :: PacBio Sequel; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/13/2023 19:21:37\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,196\nCDSs (total) :: 4,140\nGenes (coding) :: 4,102\nCDSs (with protein) :: 4,102\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 38\nCDSs (without protein) :: 38\nPseudo Genes (ambiguous residues) :: 0 of 38\nPseudo Genes (frameshifted) :: 14 of 38\nPseudo Genes (incomplete) :: 25 of 38\nPseudo Genes (internal stop) :: 4 of 38\nPseudo Genes (multiple problems) :: 5 of 38\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 50217
topology: circular
so has quality: SO_0000988
location: 1..50217
location: region:1-50217:1
RO_0002162: 1813468

NZ_CP117414
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN33038042
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of Sphingomonas naphthae
author: Kim, S.
author: Heo, J.
author: Kwon, S.-W.
journal: Unpublished

2
title: Direct Submission
author: Kim, S.
author: Heo, J.
author: Kwon, S.-W.
journal: Submitted (02-FEB-2023) Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration, 166, Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50217:1
position: 50217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-50217:1:source
so part of: sequence
organism: Sphingomonas naphthae
mol type: genomic DNA
strain: KACC 18716
isolation source: Oil contaminated soil
type material: type strain of Sphingomonas naphthae
plasmid: unnamed3
country: South Korea: Jeollabuk-do, Gunsan-si
collection date: 2018

1813468
type: Taxonomy
SIO_000068: taxonomy

PQ455_RS20580
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20580
old locus tag: PQ455_20580
so part of: sequence
location: complement(join(49993..50217,1..357))
location: region:1-50217:-1
so has part: feature:1-357:-1:exon
so has part: feature:49993-50217:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50217:-1
position: 50217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-357:-1:exon

position:357:-1
position: 357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49993-50217:-1:exon

position:49993:-1
position: 49993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PQ455_RS20580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20580
old locus tag: PQ455_20580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010220034.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLLGYARVSTDDQDLTLQKTALKAAGCRRTFEEKVSGAKRARPELDRMLEQLRDDDVVVVTRLDRLARSTRDLLDIAEKLNEAGAGLRSLAEPWADTTTPAGRMVLTVFAGIAEFERELIHQRTSSGRAAAMARGVKFGRKPKLTPDQIALGQRLVGEGTSVREAAKLLKCHHATLYRALNHPAQMPVHRSTR
SIO_010081: PQ455_RS20580
subclass of: SO_0000673
so part of: PQ455_RS20580
location: complement(join(49993..50217,1..357))
location: region:1-50217:-1
so has part: feature:1-357:-1:exon
so has part: feature:49993-50217:-1:exon

WP_007406331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49993-50217:-1:exon

PQ455_RS20585
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20585
old locus tag: PQ455_20585
so part of: sequence
location: complement(469..1347)
location: region:469-1347:-1
so has part: feature:469-1347:-1:exon
subclass of: SO_0000010

position:469:-1
position: 469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347:-1
position: 1347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469-1347:-1:exon

PQ455_RS20585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20585
old locus tag: PQ455_20585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009824028.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MATKRIRLPGPPPTEGSGSTPLTIEFLVEQPFLATREHARFVEFAEACAHYRYIGVCHGRPGVGKTRSAREFSSFPDLGEYAALRPIAALLGEKVARCRAVFYTVSVSNTPKTIDAVLGLNLIKLGYARLTVAGGSQDEITHDAARIACPLVIVDEADRLTIKSLEHLRDMADRHGFGLILMGMPGLEKRLARYAQLYSRIGFVHEFKPLTETEMRLLLATHAGDFGISFDPAQLDAIEAQAAVIRITRGNFRLMERLFAQMRRIMTLNRVEEVTADIVQAARDCLVIGPGN
SIO_010081: PQ455_RS20585
subclass of: SO_0000673
so part of: PQ455_RS20585
location: complement(469..1347)
location: region:469-1347:-1
so has part: feature:469-1347:-1:exon

WP_009824028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469-1347:-1:exon

PQ455_RS20590
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20590
old locus tag: PQ455_20590
so part of: sequence
location: complement(1274..2674)
location: region:1274-2674:-1
so has part: feature:1274-2674:-1:exon
subclass of: SO_0000010

position:1274:-1
position: 1274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2674:-1
position: 2674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1274-2674:-1:exon

PQ455_RS20590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20590
old locus tag: PQ455_20590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004212864.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mu transposase C-terminal domain-containing protein
translation: MTHPALVPPLAIERYRVLEPHLADGIPLADLARTGTLSERTLQRWLGRYRAEGLAGLARLPRNDRGRLHLPEHLVELTRTLATKRPRPPVAAIHRKVQELAIAHGHRTPSYAAVARVVRAIPASQIAAASDPAVYRDQHELVHRREAATSNEMWQADHTVLDILVLDDAGTPVRPWLTVIVDDHSRAIAGYFLSLDAPSALNTALALRQAIWRKPNPEWIVSGIPEQLYVDNGSDFISEHIEQACIALKIRLIHSLPGRPRGRGKIERLFRTINDMFLPDLPGHLIAGKPLSAPVLTLDELRARFEAFVCGVYHRRPHGSTGEPPITRWQKGGFLPAMPDSLEQLDMLLVHVPKPRKVLRDGIRLMGRRYVEPTLAAFVGEQVEAVYDPRDLTEIHVYHQGRFVCRALSSEHAGHPSLRAIQRARRGAKERDKQVPAPTETFDGDQEDTASRPTTYRGLRLYAADD
SIO_010081: PQ455_RS20590
subclass of: SO_0000673
so part of: PQ455_RS20590
location: complement(1274..2674)
location: region:1274-2674:-1
so has part: feature:1274-2674:-1:exon

WP_004212864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1274-2674:-1:exon

PQ455_RS20595
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20595
old locus tag: PQ455_20595
so part of: sequence
location: 2866..3438
location: region:2866-3438:1
so has part: feature:2866-3438:1:exon
subclass of: SO_0000010

position:2866:1
position: 2866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3438:1
position: 3438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2866-3438:1:exon

PQ455_RS20595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20595
old locus tag: PQ455_20595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004212865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKIGYARVSTAEQNLDLQRDALKAAGCEKVITDKASGATAARPGLEKVKELLRAGDTLVVWRLDRLGRSLRDLIGWMTYLDEEKVGLLSLHEAIDTTTTSGKLTFHLFGALAEFERNLIRERTQAGLTAARARGKKGGRPAALGKDKRDLAVRLYHENTMPIAKICSMLGISKPTLYAYVRSAETKPVAA
SIO_010081: PQ455_RS20595
subclass of: SO_0000673
so part of: PQ455_RS20595
location: 2866..3438
location: region:2866-3438:1
so has part: feature:2866-3438:1:exon

WP_007407197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2866-3438:1:exon

PQ455_RS20600
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20600
old locus tag: PQ455_20600
pseudo: true
so part of: sequence
location: 3602..6401
location: region:3602-6401:1
so has part: feature:3602-6401:1:exon
subclass of: SO_0000010

position:3602:1
position: 3602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6401:1
position: 6401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3602-6401:1:exon

PQ455_RS20600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20600
old locus tag: PQ455_20600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018250482.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: PQ455_RS20600
subclass of: SO_0000673
so part of: PQ455_RS20600
location: 3602..6401
location: region:3602-6401:1
so has part: feature:3602-6401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3602-6401:1:exon

PQ455_RS20605
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20605
old locus tag: PQ455_20605
so part of: sequence
location: 6505..6669
location: region:6505-6669:1
so has part: feature:6505-6669:1:exon
subclass of: SO_0000010

position:6505:1
position: 6505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6669:1
position: 6669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6505-6669:1:exon

PQ455_RS20605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20605
old locus tag: PQ455_20605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLFAGLAALLLLGSWPIATMCWIGFAASGVTMLIRFYDHRFFITRRADFQDRR
SIO_010081: PQ455_RS20605
subclass of: SO_0000673
so part of: PQ455_RS20605
location: 6505..6669
location: region:6505-6669:1
so has part: feature:6505-6669:1:exon

WP_273692247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6505-6669:1:exon

PQ455_RS20610
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20610
old locus tag: PQ455_20610
so part of: sequence
location: complement(6700..7446)
location: region:6700-7446:-1
so has part: feature:6700-7446:-1:exon
subclass of: SO_0000010

position:6700:-1
position: 6700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7446:-1
position: 7446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6700-7446:-1:exon

PQ455_RS20610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20610
old locus tag: PQ455_20610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019834048.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NYN domain-containing protein
translation: MTDDPIASRKLAVLIDADNASPQIAAGLFEEIAKIGEASVRRIYGDFTGTRLKGWAEIAPLYACLPHQNFANTVGKNASDIALVIDAMDLLYSGRFDGFCLVSSDGDFTRLAARIREQGIDVFGFGENKTPASFRQACKRFIYTENLTSPGKAAPVIPASQTAGDATKATGLPAVAAAALIETALGQLDDQAGWYFLGSVGQRLIALTPDFDPRNYGCAKLITLIEKIDAFDIRRDGLKVYIHPRKVA
SIO_010081: PQ455_RS20610
subclass of: SO_0000673
so part of: PQ455_RS20610
location: complement(6700..7446)
location: region:6700-7446:-1
so has part: feature:6700-7446:-1:exon

WP_273692250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6700-7446:-1:exon

PQ455_RS20615
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20615
old locus tag: PQ455_20615
so part of: sequence
location: complement(7920..8303)
location: region:7920-8303:-1
so has part: feature:7920-8303:-1:exon
subclass of: SO_0000010

position:7920:-1
position: 7920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8303:-1
position: 8303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7920-8303:-1:exon

PQ455_RS20615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20615
old locus tag: PQ455_20615
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDGIVVGVSGWFTPHGVRYHEDIRSVAEIVPADWSALLAHADEIGFFERPEQGPAGPSDRIFHLAITAGGRSRKLSINDPFETPGLAHLIRLTRRAVNDRKVLTQQTLGDEAFAALLAAQVAGPGV
SIO_010081: PQ455_RS20615
subclass of: SO_0000673
so part of: PQ455_RS20615
location: complement(7920..8303)
location: region:7920-8303:-1
so has part: feature:7920-8303:-1:exon

WP_273692252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7920-8303:-1:exon

PQ455_RS20620
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20620
old locus tag: PQ455_20620
so part of: sequence
location: complement(8340..8846)
location: region:8340-8846:-1
so has part: feature:8340-8846:-1:exon
subclass of: SO_0000010

position:8340:-1
position: 8340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8846:-1
position: 8846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8340-8846:-1:exon

PQ455_RS20620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20620
old locus tag: PQ455_20620
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAVPATPDGDLVGLSVSEGFAHFPGLAAERTAALGALNPGRVRALLEAADAAAFFTRAEPGEAPVRPDARAWAQRISHAGRSRLLGLPEPFDDSRLATLVRLARGCLSGLQIIVDETRRIGAGTGMVGRKPAAGSANIFDALDTPCAGDIEISFDRPVSHPHPAIFD
SIO_010081: PQ455_RS20620
subclass of: SO_0000673
so part of: PQ455_RS20620
location: complement(8340..8846)
location: region:8340-8846:-1
so has part: feature:8340-8846:-1:exon

WP_273692254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8340-8846:-1:exon

PQ455_RS20625
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20625
old locus tag: PQ455_20625
so part of: sequence
location: complement(8843..9328)
location: region:8843-9328:-1
so has part: feature:8843-9328:-1:exon
subclass of: SO_0000010

position:8843:-1
position: 8843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9328:-1
position: 9328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8843-9328:-1:exon

PQ455_RS20625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20625
old locus tag: PQ455_20625
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLGATDTETHVRISMLDRIAVRSDMANWRMPSPWAIGFGIGSGILAFPVIKVTGSLTIAGILFVLSLVTVMWLTALMIRRAWCERHPYLPPRWLTVARATMGDDLIDAALERLRDTPPGSHDRVLRRGEMIEAILDERHARLDARKAATGVRLGDAVPRP
SIO_010081: PQ455_RS20625
subclass of: SO_0000673
so part of: PQ455_RS20625
location: complement(8843..9328)
location: region:8843-9328:-1
so has part: feature:8843-9328:-1:exon

WP_273692257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8843-9328:-1:exon

PQ455_RS20630
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20630
old locus tag: PQ455_20630
so part of: sequence
location: complement(9309..9593)
location: region:9309-9593:-1
so has part: feature:9309-9593:-1:exon
subclass of: SO_0000010

position:9309:-1
position: 9309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9593:-1
position: 9593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9309-9593:-1:exon

PQ455_RS20630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20630
old locus tag: PQ455_20630
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGLLNRIVSLFDDWHLSPGGSATDDPAINPATGLPMTGGIDVAGNPFGIDLSSHRHDDWQHDHYETGSTTDMPGSGWHDPFPTGMGGRHDPWRD
SIO_010081: PQ455_RS20630
subclass of: SO_0000673
so part of: PQ455_RS20630
location: complement(9309..9593)
location: region:9309-9593:-1
so has part: feature:9309-9593:-1:exon

WP_273692259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9309-9593:-1:exon

PQ455_RS20635
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20635
old locus tag: PQ455_20635
so part of: sequence
location: 9676..9933
location: region:9676-9933:1
so has part: feature:9676-9933:1:exon
subclass of: SO_0000010

position:9676:1
position: 9676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9933:1
position: 9933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9676-9933:1:exon

PQ455_RS20635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20635
old locus tag: PQ455_20635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008276392.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MPVSPALPELHVRIVAALTGARQAAKLRQIDLAKRLGWQQAYVSRYETGERMLAVDEFVAVAQAIGVDPVVLLAQVLEDGNDEPG
SIO_010081: PQ455_RS20635
subclass of: SO_0000673
so part of: PQ455_RS20635
location: 9676..9933
location: region:9676-9933:1
so has part: feature:9676-9933:1:exon

WP_273692260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9676-9933:1:exon

PQ455_RS20640
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20640
old locus tag: PQ455_20640
so part of: sequence
location: complement(10079..10984)
location: region:10079-10984:-1
so has part: feature:10079-10984:-1:exon
subclass of: SO_0000010

position:10079:-1
position: 10079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10984:-1
position: 10984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10079-10984:-1:exon

PQ455_RS20640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20640
old locus tag: PQ455_20640
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAQRPPARPRKSRSRKGLTSSRIDLAALAAALDAVTLDPDPAALDRAQDAAYDAWEASGADQASLARSALAISPLCADAYVLLAEDDAVTDLDATVLYRLGMKAGELALGEDFENLKGEFWGWLQTRPYMRARAGRAGALYRTGHVDEALGHWRALLDLNPGDNQGVRYTLALVLLDRGDDGELRRLLGAHDDDAGIATTYTRALIAFRDGDLEAGDLLTDAIRGNRHVAAILAGTQPSRVSNNGYLTMGGTDEATIALPAEVPFAKRTAGPGCWVYDFHHVRLGPLGRLVLTELPDNAR
SIO_010081: PQ455_RS20640
subclass of: SO_0000673
so part of: PQ455_RS20640
location: complement(10079..10984)
location: region:10079-10984:-1
so has part: feature:10079-10984:-1:exon

WP_273692262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10079-10984:-1:exon

PQ455_RS20645
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20645
old locus tag: PQ455_20645
so part of: sequence
location: 11997..12875
location: region:11997-12875:1
so has part: feature:11997-12875:1:exon
subclass of: SO_0000010

position:11997:1
position: 11997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12875:1
position: 12875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11997-12875:1:exon

PQ455_RS20645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20645
old locus tag: PQ455_20645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010219839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MSSHPATVDLTFRTLAQKGRGNPFDPANYGEIVKPGELVDIVELSPLTLADRRIYNLLIANAWERIGEPIVHRIAKSALKGTHQGNERIESSLLRLMGTIAIVTIRKSGKAFKRRVQLLGPSDESLERDGFLHYRIPEELIEILRNSEVYARLKTQVMYCFESKYALCLYEMIERRIGLEYKQREEFTIDELRGLLNVPEGKLERFADLNKYCLKVAVGEINKLCPFYVEFVPIKKGRKVERVALHWFPKTSSGKRDAQNLIDQHSIVRRAKLRGGIPELPVMVDFSAPAQR
SIO_010081: PQ455_RS20645
subclass of: SO_0000673
so part of: PQ455_RS20645
location: 11997..12875
location: region:11997-12875:1
so has part: feature:11997-12875:1:exon

WP_273692263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11997-12875:1:exon

PQ455_RS20650
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20650
old locus tag: PQ455_20650
so part of: sequence
location: complement(12936..13217)
location: region:12936-13217:-1
so has part: feature:12936-13217:-1:exon
subclass of: SO_0000010

position:12936:-1
position: 12936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13217:-1
position: 13217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12936-13217:-1:exon

PQ455_RS20650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20650
old locus tag: PQ455_20650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010165326.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKGSNTLQAMLDRAKAGGETPPPAAPIAATSVRTASAGRQGTKLIGGHFAPEVSTQLRILAAEEGTTVQNLLAEALDDLFVKKGRSRVARAV
SIO_010081: PQ455_RS20650
subclass of: SO_0000673
so part of: PQ455_RS20650
location: complement(12936..13217)
location: region:12936-13217:-1
so has part: feature:12936-13217:-1:exon

WP_273692264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12936-13217:-1:exon

PQ455_RS20655
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20655
old locus tag: PQ455_20655
so part of: sequence
location: complement(13217..13849)
location: region:13217-13849:-1
so has part: feature:13217-13849:-1:exon
subclass of: SO_0000010

position:13849:-1
position: 13849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13217-13849:-1:exon

PQ455_RS20655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20655
old locus tag: PQ455_20655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006559416.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKVLAILSQKGGVGKTTLATCLAVAAEQAGKEAAIIDLDPQATASFWKDVRQLDTPAVASIQPVRLAAMLKACADAGTDLAVIDGAAVARDVAYEAARHADFILIPTKTAVFDTMSMTHTLDVVRQLDRAFAVVLTFVPPQGQETGDAMKAVEELSAAVCPVTIGNRKAFFRAQATGQAVQEFEPHGPAAAEIKRLYEYTAIRLYGKEVV
SIO_010081: PQ455_RS20655
subclass of: SO_0000673
so part of: PQ455_RS20655
location: complement(13217..13849)
location: region:13217-13849:-1
so has part: feature:13217-13849:-1:exon

WP_273692265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13217-13849:-1:exon

PQ455_RS20660
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20660
old locus tag: PQ455_20660
so part of: sequence
location: 14260..14955
location: region:14260-14955:1
so has part: feature:14260-14955:1:exon
subclass of: SO_0000010

position:14260:1
position: 14260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14955:1
position: 14955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14260-14955:1:exon

PQ455_RS20660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20660
old locus tag: PQ455_20660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686311.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate/glutamate racemase family protein
translation: MKMIGLIGGMSWESSAEYYRILNEGVRDRLGPTASARCLLWSFNFAEIEDLQHRGDWPGLTTRMVDAARRLEAGGADVLLICTNTMHRMAADVQAAVGVPLLHIADPTAERIKAAGFKKIGLLGTAFTMEHAFYKGRLTEQHGLNVVVPDDEDRATVHRIIYGELVAGKILPASREAYRAVIARLVEGGAEAVILGCTEIMLLVRPEDSQVPIFDTTALHAAAAIDIALAG
SIO_010081: PQ455_RS20660
subclass of: SO_0000673
so part of: PQ455_RS20660
location: 14260..14955
location: region:14260-14955:1
so has part: feature:14260-14955:1:exon

WP_273692268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14260-14955:1:exon

PQ455_RS20665
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20665
old locus tag: PQ455_20665
so part of: sequence
location: complement(15034..15858)
location: region:15034-15858:-1
so has part: feature:15034-15858:-1:exon
subclass of: SO_0000010

position:15034:-1
position: 15034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15858:-1
position: 15858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15034-15858:-1:exon

PQ455_RS20665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20665
old locus tag: PQ455_20665
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTQTVMMMAVLISIGGAGAVPQATAQTNDNASERKANRSASTLYEVLNEQASSRSKQSTGDVGTPVLKRDANGSACTTDQLVHASVGSNITSRIKNSIVPLQKGIQVRDIAMLTLPCGFKIDDRSGWSLFLTNGSEVRRYIENNPFGFAPAFGFSDPIEKSYTMKYEDIPREKVQTDSCINTIASISSSLKLCSSFGNEKSFFGIERSDHTSHLGHYVVRDGAIIEDFPLANINNDVNSIYFIPPPDASGGTITLIVTDGQNRYRAYMDTPRG
SIO_010081: PQ455_RS20665
subclass of: SO_0000673
so part of: PQ455_RS20665
location: complement(15034..15858)
location: region:15034-15858:-1
so has part: feature:15034-15858:-1:exon

WP_273692271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15034-15858:-1:exon

PQ455_RS20670
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20670
old locus tag: PQ455_20670
so part of: sequence
location: 17117..17422
location: region:17117-17422:1
so has part: feature:17117-17422:1:exon
subclass of: SO_0000010

position:17117:1
position: 17117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17422:1
position: 17422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17117-17422:1:exon

PQ455_RS20670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20670
old locus tag: PQ455_20670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007679632.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MHLSMLAEDAGATSIGTADTEAEAVLAAQEQRPDVILSDVRLIEGTGPNAVARIRTDCGPIPVIFVTGTPEECKPCHYAAAVLSKPVNDRMLVAAFTKIAP
SIO_010081: PQ455_RS20670
subclass of: SO_0000673
so part of: PQ455_RS20670
location: 17117..17422
location: region:17117-17422:1
so has part: feature:17117-17422:1:exon

WP_273692286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17117-17422:1:exon

PQ455_RS20675
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20675
old locus tag: PQ455_20675
so part of: sequence
location: 17545..19158
location: region:17545-19158:1
so has part: feature:17545-19158:1:exon
subclass of: SO_0000010

position:17545:1
position: 17545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19158:1
position: 19158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17545-19158:1:exon

PQ455_RS20675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20675
old locus tag: PQ455_20675
inference: COORDINATES: protein motif:HMM:TIGR00229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain S-box protein
translation: MSQNLKPSYEELEAELAQAKERLRLAELLTQPLGAASDARADHLEERPQQAYQRSDQRQSSQLAERGGAHQSAAGVAQGEALRRAILDSSTEYAIISLDRDGMITSWNEGAVQTMGWTEDEMLGKPAHVFFTPEQINAGIPEQEMREAIETGRGEDERYHLRKDGSRFWANGLMMPLEADNLNIGFVKILRDRSIQHRAQEELKKVAGELAFDRATLRAVFENAPVGLSLAAAPTGESILVNEQMRRLTGRDFSAGSMERYLGAGAIHEDGTPYTLDDYPQVQAIRHGIGTYAAPFLIERPDGTRIKTEVSSVPLRDANGSMTGAVSVVVDVHEREQALEQQEILTGELAHRMKNTMAMVQAIVHQSLRSANTLEEARESVTERFEALARAQDLLTASNWQVSNLDAVVQAALAPVNDSERIAISGEPSEVGARAALSFTLVLHELATNAVKYGALSVPDGRVMIDWRRQDCAGAERLMFTWAEQGGPPVTIPTRKGFGTRLIDSMGRSFGGRSELHYPPEGVRWLVEADPARLLII
SIO_010081: PQ455_RS20675
subclass of: SO_0000673
so part of: PQ455_RS20675
location: 17545..19158
location: region:17545-19158:1
so has part: feature:17545-19158:1:exon

WP_273692273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17545-19158:1:exon

PQ455_RS20680
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20680
old locus tag: PQ455_20680
so part of: sequence
location: complement(20117..20974)
location: region:20117-20974:-1
so has part: feature:20117-20974:-1:exon
subclass of: SO_0000010

position:20117:-1
position: 20117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20974:-1
position: 20974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20117-20974:-1:exon

PQ455_RS20680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20680
old locus tag: PQ455_20680
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MWPLRDAAINRRAFEGELRRAIDENEFELFYQPQVRIADGALLGVEALLRWRHPVQGLLPPDNFLPTVESGLLAPEIGRWVMETACAHAIEMRRKVPDLIIGVNVFGAQFSTGRLAIDVAAVLERTGLPPEALELEITENIVLRHDDTMLAPLRALRKAGVGIAFDDFGTGFASLSLLKRYPLSRLKIDRSFIRDICTDRVDAAVVNAMVYLATSLGVEVIAEGVETEAQCDLLRACGCPTAQGYLFGRPMPLADLTVYLCESAQVADVARNLDHQPLKRSSPAP
SIO_010081: PQ455_RS20680
subclass of: SO_0000673
so part of: PQ455_RS20680
location: complement(20117..20974)
location: region:20117-20974:-1
so has part: feature:20117-20974:-1:exon

WP_273692288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20117-20974:-1:exon

PQ455_RS20685
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20685
old locus tag: PQ455_20685
so part of: sequence
location: complement(20859..21866)
location: region:20859-21866:-1
so has part: feature:20859-21866:-1:exon
subclass of: SO_0000010

position:20859:-1
position: 20859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21866:-1
position: 21866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20859-21866:-1:exon

PQ455_RS20685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20685
old locus tag: PQ455_20685
inference: COORDINATES: protein motif:HMM:NF013736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain S-box protein
translation: MRSAPHLFNEDARLAALAEYDLLSENDDVDLNEMVKLAARLFDVPIALVSLVERDTQTFKARIGLDICGTTRDVSFCAHAIAQTDILVIPDALLDPRFATNPLVTGSPYIRFYAGVPLRSPGGFAIGSLCIIDNRPRNGFSDKDKTNLQALARIVTDRLEMRRLAVAGAIGQTRFENIAATSPDGIICADHHGDITFWNAACERLFGFTADEATGKSLDIIVPERMRGGHGGGLQRVAAGGKPRLVGTTVELDAARQDGSEFPIELSLSMWREGDQASFGAIIRDIGERRGNETRLFNLAAARRGYQSPGIRRRTAPRDRRKRVRAILPAAGSDS
SIO_010081: PQ455_RS20685
subclass of: SO_0000673
so part of: PQ455_RS20685
location: complement(20859..21866)
location: region:20859-21866:-1
so has part: feature:20859-21866:-1:exon

WP_273692275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20859-21866:-1:exon

PQ455_RS20690
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20690
old locus tag: PQ455_20690
so part of: sequence
location: 22225..22533
location: region:22225-22533:1
so has part: feature:22225-22533:1:exon
subclass of: SO_0000010

position:22225:1
position: 22225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22533:1
position: 22533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22225-22533:1:exon

PQ455_RS20690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20690
old locus tag: PQ455_20690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MESKEEYQGRVASALLKAITDTSLVDIDGTTTAYIRSAEVCDALITALAVIMEGAPQCRTRKGMRAMSEAAGRNLLTMMREMEKLRAETGASAFNARVIYPS
SIO_010081: PQ455_RS20690
subclass of: SO_0000673
so part of: PQ455_RS20690
location: 22225..22533
location: region:22225-22533:1
so has part: feature:22225-22533:1:exon

WP_273692277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22225-22533:1:exon

PQ455_RS20695
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20695
old locus tag: PQ455_20695
so part of: sequence
location: 22695..23201
location: region:22695-23201:1
so has part: feature:22695-23201:1:exon
subclass of: SO_0000010

position:22695:1
position: 22695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23201:1
position: 23201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22695-23201:1:exon

PQ455_RS20695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20695
old locus tag: PQ455_20695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007679748.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferritin-like domain-containing protein
translation: MSTPEDLKDVYTDELKDLWSANDQMQKVLKKITSKASDATLKDMLKNSQDGITKHTEILKELIAGQDEKVSKEHCKGMEGLVAEATKHVLEEGPDKGPVLDTLIIAQYQRMTHYGIAGFGTAAAYAKALGLKDDNKKLREATKEIYGGDEFMTKLAETAVNAKADKAA
SIO_010081: PQ455_RS20695
subclass of: SO_0000673
so part of: PQ455_RS20695
location: 22695..23201
location: region:22695-23201:1
so has part: feature:22695-23201:1:exon

WP_273692279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22695-23201:1:exon

PQ455_RS20700
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20700
old locus tag: PQ455_20700
so part of: sequence
location: 23636..24031
location: region:23636-24031:1
so has part: feature:23636-24031:1:exon
subclass of: SO_0000010

position:23636:1
position: 23636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24031:1
position: 24031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23636-24031:1:exon

PQ455_RS20700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20700
old locus tag: PQ455_20700
inference: COORDINATES: protein motif:HMM:NF021098.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2382 domain-containing protein
translation: MISDADEVRVPLVEERVQVEKVEVETDRVRVRTVVDEHFETIEQVLQTGRLDVRNIPLDQEVAEAPAPRQDGDTLIVSIVEERLVKRLFLVEEVHITQSSHAEAVSVPVSLRRMRAVVEQDAADSLPTGRE
SIO_010081: PQ455_RS20700
subclass of: SO_0000673
so part of: PQ455_RS20700
location: 23636..24031
location: region:23636-24031:1
so has part: feature:23636-24031:1:exon

WP_273692281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23636-24031:1:exon

PQ455_RS20705
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20705
old locus tag: PQ455_20705
so part of: sequence
location: 24031..24654
location: region:24031-24654:1
so has part: feature:24031-24654:1:exon
subclass of: SO_0000010

position:24654:1
position: 24654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24031-24654:1:exon

PQ455_RS20705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20705
old locus tag: PQ455_20705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010188711.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MADPKDTRGAPPREMHIGKKKGTNWLAWIALLAGILALLFALSRCGRDDASAVTTVASTNTTDVVATTPNAGSATALAGTSGLGGYLAGTEAAPRTFQFEKLTFDTAKSTLRPDDAEEVGTIAAVLKQYGNTHVRIAGYADARGSDAANAALGKARADAVKAGLVAQGIAADRIETVSGGESDPVGTNATASGQAENRRTELVVTSR
SIO_010081: PQ455_RS20705
subclass of: SO_0000673
so part of: PQ455_RS20705
location: 24031..24654
location: region:24031-24654:1
so has part: feature:24031-24654:1:exon

WP_273692282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24031-24654:1:exon

PQ455_RS20710
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20710
old locus tag: PQ455_20710
so part of: sequence
location: 24685..25542
location: region:24685-25542:1
so has part: feature:24685-25542:1:exon
subclass of: SO_0000010

position:24685:1
position: 24685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25542:1
position: 25542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24685-25542:1:exon

PQ455_RS20710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20710
old locus tag: PQ455_20710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015824003.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2382 domain-containing protein
translation: MTRTITALFDHRADAEAAEQRLQAANIDADHIRIQDKSSTGYNETGHSTHDEPGLWGSIKNAFLPDEDRHTYEEGVRRGGVLLTVDVDEDHVDDAVRVLEEAETVDIDDRSQQWRSSGWTGSPAVGAMSAGYTDKDRPDTASATATGAVGNRDEEVIPVVEEQLVVGKREVDRGGVRVRSYVTETPVHEQIRLRNERVNVERRPVDREVSETDAFRERTIDMTATGEEAVVGKTAHVVEEVVVSKTADERVEQIDDTVRRTDVEVDRDAGSEAARGSTFGTRTDR
SIO_010081: PQ455_RS20710
subclass of: SO_0000673
so part of: PQ455_RS20710
location: 24685..25542
location: region:24685-25542:1
so has part: feature:24685-25542:1:exon

WP_273692284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24685-25542:1:exon

PQ455_RS20715
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20715
old locus tag: PQ455_20715
so part of: sequence
location: 25793..26140
location: region:25793-26140:1
so has part: feature:25793-26140:1:exon
subclass of: SO_0000010

position:25793:1
position: 25793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26140:1
position: 26140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25793-26140:1:exon

PQ455_RS20715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20715
old locus tag: PQ455_20715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKLDDQKGTAANFVEQLAQTVQKSGEQFEGQQDWIASAIGRGAAELNTLAGSLRDKDLGELTREVQSFARRQPALFIGATLVAGFAVARLGKIVASDVSREDLPTVPEVGHDQH
SIO_010081: PQ455_RS20715
subclass of: SO_0000673
so part of: PQ455_RS20715
location: 25793..26140
location: region:25793-26140:1
so has part: feature:25793-26140:1:exon

WP_273692196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25793-26140:1:exon

PQ455_RS20720
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20720
old locus tag: PQ455_20720
so part of: sequence
location: 26127..26522
location: region:26127-26522:1
so has part: feature:26127-26522:1:exon
subclass of: SO_0000010

position:26127:1
position: 26127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26522:1
position: 26522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26127-26522:1:exon

PQ455_RS20720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20720
old locus tag: PQ455_20720
inference: COORDINATES: protein motif:HMM:NF018980.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MTNTEPRPAPSLGDIAGGLAGDVQDLVRGELALARAEFDQKLHGLLGGAVSLVGGALVAFAGLVVLLEGGAAVLARWIPAWAALLIVGLVIVLVGGLIARAGLTRLSLKNLTPDRTTANLKKDGRILKEHL
SIO_010081: PQ455_RS20720
subclass of: SO_0000673
so part of: PQ455_RS20720
location: 26127..26522
location: region:26127-26522:1
so has part: feature:26127-26522:1:exon

WP_273692198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26127-26522:1:exon

PQ455_RS20725
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20725
old locus tag: PQ455_20725
so part of: sequence
location: 26522..27466
location: region:26522-27466:1
so has part: feature:26522-27466:1:exon
subclass of: SO_0000010

position:27466:1
position: 27466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26522-27466:1:exon

PQ455_RS20725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20725
old locus tag: PQ455_20725
inference: COORDINATES: protein motif:HMM:NF023697.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3618 domain-containing protein
translation: MADDTNDTDQIEQDLAQTRARMDRRLDQLGDRLAPNQLVNDALAHVTGGDGADFAQTLIAKAKANPVPAALAGIGIAWLMASSQHKQAKAGNDLSSRLRAAEANVIQLHDEHTDVHASRLDDARGQVLGVARSASDTSASYAQRIKDAVASAGDSLVETSHDLQNSTSSTVNRVAGWIRGKGQGGGHAGSPISNPVVLGTTAALVGLVAGALIPVSDEEERALDSFAGTLKAKGRDLAQDVVNRGAQVAGDTLDAVKDSAQTHGLTADKPIGDLLGELKSGELLSHAKQAAQEVADTSKQSVQSQMSGQEKSLR
SIO_010081: PQ455_RS20725
subclass of: SO_0000673
so part of: PQ455_RS20725
location: 26522..27466
location: region:26522-27466:1
so has part: feature:26522-27466:1:exon

WP_273692200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26522-27466:1:exon

PQ455_RS20730
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20730
old locus tag: PQ455_20730
so part of: sequence
location: 27721..27918
location: region:27721-27918:1
so has part: feature:27721-27918:1:exon
subclass of: SO_0000010

position:27721:1
position: 27721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27918:1
position: 27918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27721-27918:1:exon

PQ455_RS20730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20730
old locus tag: PQ455_20730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008069133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CsbD family protein
translation: MADEALGNVKQAAGSLFGNESLKRDGIEQERRGEASRGSSYSPTFLIKECALSCGTVSFHREDPS
SIO_010081: PQ455_RS20730
subclass of: SO_0000673
so part of: PQ455_RS20730
location: 27721..27918
location: region:27721-27918:1
so has part: feature:27721-27918:1:exon

WP_273692201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27721-27918:1:exon

PQ455_RS20735
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20735
old locus tag: PQ455_20735
so part of: sequence
location: 27915..29201
location: region:27915-29201:1
so has part: feature:27915-29201:1:exon
subclass of: SO_0000010

position:27915:1
position: 27915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29201:1
position: 29201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27915-29201:1:exon

PQ455_RS20735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20735
old locus tag: PQ455_20735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020188101.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation:proton antiporter
translation: MIAASGLPDPYILILTGFGLLTALVVWLPLALRKLPLSLPIVCIALGAALFSLPQITLKPLPLLYPEITERFTEFVVIIALMGAGLKIDRVFRWRDWTVTWRLLAITMPLGILAIAAVTAWGMGLPWAIALLLAASLAPTDPVLAADIQVGPPKSEDEDEVRFGLTSEAGLNDGFAFPFVHLAIMLAAVAGSRQPWLSEWLTYRVLWEIGAGVGAGWLIGRAFGWLTFHVLAQTKLAQTGDGLIALAATCISYGITEIIHCYGFLAVFVTALTFRGTHRTHDFHHDMHDVTEQIERLAMMVLLLLFGGALVSGLLASVSRTDVFIALVILLVIRPITGLIGLAGHRADRSEKLTLAFFGIRGVGSIYYLAYGLNHIHVQAAERLWGLVGLVVLFSIVLHGLTVTPIMRLLDRQHGRDPDKDEPPAVGA
SIO_010081: PQ455_RS20735
subclass of: SO_0000673
so part of: PQ455_RS20735
location: 27915..29201
location: region:27915-29201:1
so has part: feature:27915-29201:1:exon

WP_273692203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27915-29201:1:exon

PQ455_RS20740
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20740
old locus tag: PQ455_20740
so part of: sequence
location: 29304..30575
location: region:29304-30575:1
so has part: feature:29304-30575:1:exon
subclass of: SO_0000010

position:29304:1
position: 29304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30575:1
position: 30575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29304-30575:1:exon

PQ455_RS20740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20740
old locus tag: PQ455_20740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010164884.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YihY/virulence factor BrkB family protein
translation: MVDTTKSELSGHDAVSPWAIPAKGWKDIALRAWKEGGQDNISLVASGVAFCGVLAMVPMLGAVVLSYGLVATPETVMKNVQSLTSVMPTDAAKLIGEQLANVVTTSDGKKGFGLLLALGIALYGAMKGATALITSLNIAYDEEETRSFVRLNLIALAITAGAVLIAIVAIIAIAAMGSLDTLFPAAPAIVLTAGKIVSYGIMAGMGAAAAATLYRYAPNRDEAKWTWLTPGSVLTTVLWLVVTLGFGFYVANFGSYDATYGSLGAAIVLLTWLYLSAYILLLGAEFNCELERQTTQDTTRGPTKSLGDRGAYAANTVASGPEIAPQEGPAPQSSSGDKAVSRAAPSTPSPLREYAAGRMVVRAARVTGLGKTGMVPSVIVTGGLVLLLRRDKAIIGAGLLAIGGGLSWLSERPTNSRTTELPD
SIO_010081: PQ455_RS20740
subclass of: SO_0000673
so part of: PQ455_RS20740
location: 29304..30575
location: region:29304-30575:1
so has part: feature:29304-30575:1:exon

WP_273692206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29304-30575:1:exon

PQ455_RS20745
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20745
old locus tag: PQ455_20745
so part of: sequence
location: 30686..31210
location: region:30686-31210:1
so has part: feature:30686-31210:1:exon
subclass of: SO_0000010

position:30686:1
position: 30686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31210:1
position: 31210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30686-31210:1:exon

PQ455_RS20745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20745
old locus tag: PQ455_20745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011950563.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF937 domain-containing protein
translation: MNLNDLLPDGGIDALAAQLGIPREQAQRGAEALLPSVLGGMGNNATQLDAHVNTLGGPDLASNVLGNEPTQIDRGNQILGGIFGSKDGSREVADNAAQNSGLTPDLLKQMLPILVMLVAGHLTSRSGGQQGGLGGILGSVLGSLGGAGVAGAAPGGGLGGGLGGILGSVFGERR
SIO_010081: PQ455_RS20745
subclass of: SO_0000673
so part of: PQ455_RS20745
location: 30686..31210
location: region:30686-31210:1
so has part: feature:30686-31210:1:exon

WP_273692207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30686-31210:1:exon

PQ455_RS20750
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20750
old locus tag: PQ455_20750
so part of: sequence
location: complement(31620..32030)
location: region:31620-32030:-1
so has part: feature:31620-32030:-1:exon
subclass of: SO_0000010

position:31620:-1
position: 31620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32030:-1
position: 32030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31620-32030:-1:exon

PQ455_RS20750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20750
old locus tag: PQ455_20750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008832006.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3597 family protein
translation: MSIFSTIMNKVFHHKAAPAAAPAQAPAAAPQAAPQAAPTATAQPAPAAAQQSVDVGAVLSEMASMKDGGGNYQSSIVDLLKLLDLDSSLTARKELASELNVHVAADGSAEQNIALHKAVMQKLADNGGIVPDNLRN
SIO_010081: PQ455_RS20750
subclass of: SO_0000673
so part of: PQ455_RS20750
location: complement(31620..32030)
location: region:31620-32030:-1
so has part: feature:31620-32030:-1:exon

WP_273692209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31620-32030:-1:exon

PQ455_RS20755
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20755
old locus tag: PQ455_20755
so part of: sequence
location: 32184..32774
location: region:32184-32774:1
so has part: feature:32184-32774:1:exon
subclass of: SO_0000010

position:32184:1
position: 32184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32774:1
position: 32774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32184-32774:1:exon

PQ455_RS20755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20755
old locus tag: PQ455_20755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339411.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4142 domain-containing protein
translation: MNFKTLALVSVAALSLAACGKKADDTTAVDNGAYANTTAMDVNAAGANDAMAAPASGGQAFVNMAAASDAFEIETSKLAVTNGASAAVKKFAGQMITAHEGSTAKLKALTATLSPALTPNPALSAEQQQKLADLKTKQGTDFDTAYAAAQVAGHQQTLDTLKGYAATGDVPQLKTFASGLAPTVAAHLNMAKALKS
SIO_010081: PQ455_RS20755
subclass of: SO_0000673
so part of: PQ455_RS20755
location: 32184..32774
location: region:32184-32774:1
so has part: feature:32184-32774:1:exon

WP_273692211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32184-32774:1:exon

PQ455_RS20760
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20760
old locus tag: PQ455_20760
so part of: sequence
location: 32930..34789
location: region:32930-34789:1
so has part: feature:32930-34789:1:exon
subclass of: SO_0000010

position:32930:1
position: 32930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34789:1
position: 34789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32930-34789:1:exon

PQ455_RS20760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20760
old locus tag: PQ455_20760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012605358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AI-2E family transporter
translation: MSSPDNIAGYKDVVTGSREAPADNPGAAQIRSASAPELKTLAGVAVGTLVIAALYFGQEVLIPITLAVMLSFVLSPVVNLLQRLRLWRAPAVILTVIAALGVLGLFGALIGSQAASLTVNAPQYARTIEAKVQGVQGFAVARLASITKELGGSRPTTRPRAAPATLATPPAVTASDQRRPIPVEVVQGSTSPFAIARTVLEPILGPLETTVIVLIVAIFVLMQKEDLRDRFIRVFGSSDLHRTTRAIDDAGQRLSKYFLSQLAVNTCFGVVIGLGLWLIGIPSPAMWGVMAGLLRFVPYIGPFLAAVAPAALGAAVDPGWGMALEVVALFVIIEPLTGYVVEPLLYGHSTGLSPVSVIVSAIFWTWLWGPIGLIMSTPLTLCLVVMGRHVKSLEFFDVLLGDRPALTPIESFYQRILARNPDEALAQAEMLLADRSLTEYYDGVVLEGLKLAVEDEARGTIDRAGAAQMTKSMMSVIEDLQPTSGAAPSDTMAKAQTVACVAGHGPFDDAVTAMLTQLLGQQGVQAKRIPNTAVSRDAVQTLDLNGIDVIAISYLEVTGSPAQLRYLVRRLRARAPNARIVVGLWPQGEASLSDAGIQQALGADRYVSSLHDAVQDIVT
SIO_010081: PQ455_RS20760
subclass of: SO_0000673
so part of: PQ455_RS20760
location: 32930..34789
location: region:32930-34789:1
so has part: feature:32930-34789:1:exon

WP_273692213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32930-34789:1:exon

PQ455_RS20765
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20765
old locus tag: PQ455_20765
pseudo: true
so part of: sequence
location: <35030..35149
location: region:35030-35149:1
so has part: feature:35030-35149:1:exon
subclass of: SO_0000010

position:35030:1
position: 35030
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:35149:1
position: 35149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35030-35149:1:exon

PQ455_RS20765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20765
old locus tag: PQ455_20765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012048457.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: arsenical resistance protein ArsH
SIO_010081: PQ455_RS20765
subclass of: SO_0000673
so part of: PQ455_RS20765
location: <35030..35149
location: region:35030-35149:1
so has part: feature:35030-35149:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35030-35149:1:exon

PQ455_RS20770
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20770
old locus tag: PQ455_20770
so part of: sequence
location: 35271..35825
location: region:35271-35825:1
so has part: feature:35271-35825:1:exon
subclass of: SO_0000010

position:35271:1
position: 35271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35825:1
position: 35825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35271-35825:1:exon

PQ455_RS20770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20770
old locus tag: PQ455_20770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010219283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSTDDQDLRLQRAALKDAGCCRIFEEKVSGAKRDRPELAKMIEQLRDDDTVAVTRLDRLARSTRDLLDIAEKLKEAGAGLRSLAEPWADTTSPAGRMVLTVFAGIAEFERELIHQRTSSGRVAAKARGVRFGRPPKLTADQIALGKRLVGEGTSVRETAKLLKCHHATLYRTLSGSP
SIO_010081: PQ455_RS20770
subclass of: SO_0000673
so part of: PQ455_RS20770
location: 35271..35825
location: region:35271-35825:1
so has part: feature:35271-35825:1:exon

WP_273692215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35271-35825:1:exon

PQ455_RS20775
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20775
old locus tag: PQ455_20775
so part of: sequence
location: 35903..36196
location: region:35903-36196:1
so has part: feature:35903-36196:1:exon
subclass of: SO_0000010

position:35903:1
position: 35903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36196:1
position: 36196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35903-36196:1:exon

PQ455_RS20775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20775
old locus tag: PQ455_20775
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGDRIELSQNDDHVGGRFKWEREPSCCSQLKAAVDEDKFIFVSNFVDGENGPNSFYMMPVDADGYLARSKGVQISHCPWCGTAIDARKHYPAKTKRR
SIO_010081: PQ455_RS20775
subclass of: SO_0000673
so part of: PQ455_RS20775
location: 35903..36196
location: region:35903-36196:1
so has part: feature:35903-36196:1:exon

WP_273692217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35903-36196:1:exon

PQ455_RS20780
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20780
old locus tag: PQ455_20780
so part of: sequence
location: complement(36198..36950)
location: region:36198-36950:-1
so has part: feature:36198-36950:-1:exon
subclass of: SO_0000010

position:36198:-1
position: 36198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36950:-1
position: 36950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36198-36950:-1:exon

PQ455_RS20780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20780
old locus tag: PQ455_20780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005979571.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GIY-YIG nuclease family protein
translation: MDGRNPDEINFPPFETEDLRKNLARYLDNAFTAEGAAVASKVGNFKWGVYAFFDYDGEPIYVGQTNEQLRTRIRRHLTNQRTDAVAMSVLDPFEVYEIEVWPLPALQDVSKPRSRTDPRWPTWEAAVDQLNALERKVYDRAIERSHFRAVLNEKDPPPAKIEMDFPLSFRDCIVSDEVHAIRSHPDFRIARRALIIARLAQVIAERKVQGGLRRVMLIQAKRLQWLADRRYNALGGAASVERKDGADSDD
SIO_010081: PQ455_RS20780
subclass of: SO_0000673
so part of: PQ455_RS20780
location: complement(36198..36950)
location: region:36198-36950:-1
so has part: feature:36198-36950:-1:exon

WP_273692218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36198-36950:-1:exon

PQ455_RS20785
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20785
old locus tag: PQ455_20785
so part of: sequence
location: 37080..37295
location: region:37080-37295:1
so has part: feature:37080-37295:1:exon
subclass of: SO_0000010

position:37080:1
position: 37080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37295:1
position: 37295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37080-37295:1:exon

PQ455_RS20785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20785
old locus tag: PQ455_20785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012286294.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTPFKPTTVRDLDRINLRLSAETFAQIDVARADRLGNISRNTWITEAVAEKLARETSANDRREEGRVANG
SIO_010081: PQ455_RS20785
subclass of: SO_0000673
so part of: PQ455_RS20785
location: 37080..37295
location: region:37080-37295:1
so has part: feature:37080-37295:1:exon

WP_273692220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37080-37295:1:exon

PQ455_RS20790
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
gene: dcm
locus tag: PQ455_RS20790
old locus tag: PQ455_20790
so part of: sequence
location: 37288..38436
location: region:37288-38436:1
so has part: feature:37288-38436:1:exon
subclass of: SO_0000010

position:37288:1
position: 37288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38436:1
position: 38436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37288-38436:1:exon

PQ455_RS20790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
gene: dcm
locus tag: PQ455_RS20790
old locus tag: PQ455_20790
EC number: 2.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018409483.1
GO function: GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA (cytosine-5-)-methyltransferase
translation: MAEFYEFFAGGGMARAGLGAGWTCLFANDFDHKKGLTYQANWGTGGELTVGDVKQVTAASLPGVADLVWGSFPCQDLSLAGGGAGLRGERSGTFYPFWNVIRALVADDRAPRLIALENVCGTLTSHGGKDFEAICQTFADAGYRCGALVINAALFLPQSRPRLFVVGVHADVNVDPALLAPGPIEPFHTRGLQSAVERLPAALRETMLWWNMPTPNRRNSTFASMIEENPTSVSWHTPAETQQLLAMMSPINLAKVNAAKRAGHRMVGGVYKRTRLNEKGVKVQRAEIRFDDMSGCLRTPAGGSSRQVIVVIDGAKVGSRLISARETARLMGLGDDYKLPRNYNEAYHLTGDGVAVPVVRHLAHHILEPLLGMAEAAERAAA
SIO_010081: PQ455_RS20790
subclass of: SO_0000673
so part of: PQ455_RS20790
location: 37288..38436
location: region:37288-38436:1
so has part: feature:37288-38436:1:exon

WP_273692221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37288-38436:1:exon

PQ455_RS20795
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20795
old locus tag: PQ455_20795
pseudo: true
so part of: sequence
location: 38433..>38804
location: region:38433-38804:1
so has part: feature:38433-38804:1:exon
subclass of: SO_0000010

position:38433:1
position: 38433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38804:1
position: 38804
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38433-38804:1:exon

PQ455_RS20795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20795
old locus tag: PQ455_20795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005919317.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: PQ455_RS20795
subclass of: SO_0000673
so part of: PQ455_RS20795
location: 38433..>38804
location: region:38433-38804:1
so has part: feature:38433-38804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38433-38804:1:exon

PQ455_RS20800
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20800
old locus tag: PQ455_20800
so part of: sequence
location: 38965..40164
location: region:38965-40164:1
so has part: feature:38965-40164:1:exon
subclass of: SO_0000010

position:38965:1
position: 38965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40164:1
position: 40164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38965-40164:1:exon

PQ455_RS20800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20800
old locus tag: PQ455_20800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MTDDTMNLQALVGKSADAEFLREMIGFAAQRLMDLEVGSLTGAGYGEKSGERLAQRNGYRERDWETRAGTVELRIPKLRTGSYFPAFLEPRRLSEKALTAVVQEAYIQGISTRSVDDLVKAMGMSGISKSQVSRLCEEIDVRVKAFLERPIEGDWPYVWVDATYLKVRQAGRIVSVAVTIAVGVNGDGRREVLGMAIGASEAETFWTDFLRSLARRGLRGVKLVISDAHEGIKAAVSRVFNATWQRCRVHFARNATAHAGKSGRRVVSAFIATAYAQETPEAAKGQWRKVADQLRPSVPKLAKLMDTAEEDVLAYMSFPPQHRTKLHSTNPLERLNGEIKRRTDVVGIFPNEDAITRLVGALLLEQNDEWAVQRGRYMTLESVTQLSDDTTVTLSSMAA
SIO_010081: PQ455_RS20800
subclass of: SO_0000673
so part of: PQ455_RS20800
location: 38965..40164
location: region:38965-40164:1
so has part: feature:38965-40164:1:exon

WP_273692223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38965-40164:1:exon

PQ455_RS20805
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20805
old locus tag: PQ455_20805
pseudo: true
so part of: sequence
location: <40234..40722
location: region:40234-40722:1
so has part: feature:40234-40722:1:exon
subclass of: SO_0000010

position:40234:1
position: 40234
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:40722:1
position: 40722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40234-40722:1:exon

PQ455_RS20805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20805
old locus tag: PQ455_20805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015040918.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: PQ455_RS20805
subclass of: SO_0000673
so part of: PQ455_RS20805
location: <40234..40722
location: region:40234-40722:1
so has part: feature:40234-40722:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40234-40722:1:exon

PQ455_RS20810
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
gene: vsr
locus tag: PQ455_RS20810
old locus tag: PQ455_20810
so part of: sequence
location: complement(40719..41126)
location: region:40719-41126:-1
so has part: feature:40719-41126:-1:exon
subclass of: SO_0000010

position:40719:-1
position: 40719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41126:-1
position: 41126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40719-41126:-1:exon

PQ455_RS20810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
gene: vsr
locus tag: PQ455_RS20810
old locus tag: PQ455_20810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012754068.1
GO function: GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch endonuclease Vsr
translation: MDTLDPAARSERMRRVRGKNTRPEMVVRRLAHRLGYRFRLHRRDLPGSPDLVFPGRRAVIFVHGCFWHQHDCSRGARRPSNNAAYWHPKLARNVERDREARQRLESEGWRVLVLWECEMRNSEQLSRRLTGFLDP
SIO_010081: PQ455_RS20810
subclass of: SO_0000673
so part of: PQ455_RS20810
location: complement(40719..41126)
location: region:40719-41126:-1
so has part: feature:40719-41126:-1:exon

WP_273692225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40719-41126:-1:exon

PQ455_RS20815
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20815
old locus tag: PQ455_20815
so part of: sequence
location: complement(41235..41795)
location: region:41235-41795:-1
so has part: feature:41235-41795:-1:exon
subclass of: SO_0000010

position:41235:-1
position: 41235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41795:-1
position: 41795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41235-41795:-1:exon

PQ455_RS20815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20815
old locus tag: PQ455_20815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019751509.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toll/interleukin-1 receptor domain-containing protein
translation: MSYVTESEVRAAASRAKAATFKAAGTLLREARDTSRSSFDVFLSHSFVDQELVLGAKQLLEEKGLTVYVDWIDDPLLDRSAVTRATAEKIRARMRQCRTLLYLHSANATKSKWCPWELGYFDAFTHPSRRVFIFPVTAADRAYTSQEYLNLYDTVDMASIGVATRRRDDIRVKGADSSFRAWSVAA
SIO_010081: PQ455_RS20815
subclass of: SO_0000673
so part of: PQ455_RS20815
location: complement(41235..41795)
location: region:41235-41795:-1
so has part: feature:41235-41795:-1:exon

WP_273692227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41235-41795:-1:exon

PQ455_RS20820
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20820
old locus tag: PQ455_20820
so part of: sequence
location: complement(41810..42292)
location: region:41810-42292:-1
so has part: feature:41810-42292:-1:exon
subclass of: SO_0000010

position:41810:-1
position: 41810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42292:-1
position: 42292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41810-42292:-1:exon

PQ455_RS20820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20820
old locus tag: PQ455_20820
inference: COORDINATES: protein motif:HMM:NF020509.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIR domain-containing protein
translation: MARRVFFSFHFARDAWRVSQVRNAWMLPGSRDSNTIVDHASWEEIMRKGSQAIQNWIDTQMNGSSVVAVLIGRDTHMRPWVEYEIRKAHREGRGILGVHLAGIKDSSGAVDPAGPDPIAKLALTDRFGTRVTYPTYSWLQGDGRNNFSSWVEAAARRAGR
SIO_010081: PQ455_RS20820
subclass of: SO_0000673
so part of: PQ455_RS20820
location: complement(41810..42292)
location: region:41810-42292:-1
so has part: feature:41810-42292:-1:exon

WP_273692229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41810-42292:-1:exon

PQ455_RS20825
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20825
old locus tag: PQ455_20825
so part of: sequence
location: complement(42328..43770)
location: region:42328-43770:-1
so has part: feature:42328-43770:-1:exon
subclass of: SO_0000010

position:42328:-1
position: 42328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43770:-1
position: 43770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42328-43770:-1:exon

PQ455_RS20825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20825
old locus tag: PQ455_20825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013698479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIR2 family protein
translation: MSDREIFLREYTLALAEDGASVLVGAGTSMAAGYPSWKGLLREIAGDLGLEIEDVDDLTAVAQWAIGADHSNRTTVLNAIREQIEPDHAIPSALLSLARLPIREVWTTNYDRLIERAFGALGRPVDVRANQDQLALRKRRAGAVRIYKMHGTIDAVDDLVISTEDYELYRQRRGAFLGLLHAHLTGMTFLFLGMSLTDPNVRHVLALLREHFPTTPPRHFMIARRPQRADFGSDDAHAARSKRHDYWVRDLRRYGLVVVEIDAFKEIDELMDELERRVARRRIWVSGSWPLDAADASTGFVHDVARAIGRRIGATDFFMLSGAGLLVGSASLSGFLETMQARGEWDFDRRLVVRPFPQPVGDAEPDRQHWAELRGELARLAGIVVFVGGAKIEAGELVTAAGALEERALADSRGAFLLPVGATGGAASVIAGELLASAAPSTGGDARRPTDDELRILSDASATPDQLADEVLKIIRRVAR
SIO_010081: PQ455_RS20825
subclass of: SO_0000673
so part of: PQ455_RS20825
location: complement(42328..43770)
location: region:42328-43770:-1
so has part: feature:42328-43770:-1:exon

WP_273692231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42328-43770:-1:exon

PQ455_RS20830
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20830
old locus tag: PQ455_20830
so part of: sequence
location: complement(43831..44196)
location: region:43831-44196:-1
so has part: feature:43831-44196:-1:exon
subclass of: SO_0000010

position:43831:-1
position: 43831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44196:-1
position: 44196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43831-44196:-1:exon

PQ455_RS20830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20830
old locus tag: PQ455_20830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEAATMFFTRRDFAGVASTLVHRPAKQFEATIDRLFGEQVRADGAFGVDLWCALAGVEWRNGQAETVCYSHRCAGEVIAWVREDGGYLEWYASGEAGEVADWIGDALRDAGWSWSIPDRPA
SIO_010081: PQ455_RS20830
subclass of: SO_0000673
so part of: PQ455_RS20830
location: complement(43831..44196)
location: region:43831-44196:-1
so has part: feature:43831-44196:-1:exon

WP_273692234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43831-44196:-1:exon

PQ455_RS20835
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
gene: mobF
locus tag: PQ455_RS20835
old locus tag: PQ455_20835
so part of: sequence
location: complement(44201..47560)
location: region:44201-47560:-1
so has part: feature:44201-47560:-1:exon
subclass of: SO_0000010

position:44201:-1
position: 44201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47560:-1
position: 47560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44201-47560:-1:exon

PQ455_RS20835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
gene: mobF
locus tag: PQ455_RS20835
old locus tag: PQ455_20835
inference: COORDINATES: protein motif:HMM:NF041492.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MISVNAISSAGNAASYYAKDNYYTVDQAEEASAWAGEGATALGLEGAVDAARFEAILEGRLPDGSVIDARRGEHRPGWDLTMSVPKSVSVLALVGGDARLIAAVREAATATLGWIERNIVEARVSTAEGQRAVRTGNVLAATFLHDVNRNGEPQLHVHNVLANATRMADGSWKALHSDALYQRQHVMGAVFASTLRARVEALGYVTTPAQNPIDGAFDIAGVPRGVVEAFSTRSGEIGAHLEAHGREGTARERELATLATRNAKTPEVAPALRAEGWRALAAENGFDARQLVGEALARSERAETMWTRTMRGIRGVGERGLAVAARMGLSPRDGDPLVPERLGRLDPVRYAAAQAVASAARDMGESEAAFDRLDLIRGALERGGPVMVGDVEARIGLLEGKGLLLGDGDRMVTTESAVRLERAYLAGIEAGRGQAVSIVSPGDAVSAAQEAARELGLRPLNPGQQAAAVLILSSTDRVVNIQGGPGRGKSAALAPVTAIAKAQGHHVIGLAIASRTATALGRDTGAETSTIARFLARHARVIDGAASAAQLARVTTELKGAVIMIEEASQVGTWDMERIVRLADMIGAARLVQIGDSRQLGAIAAGKPFEDSQRAGYATAHITENLRSRSDQMKGIVAALDSRDLSTVFDLLKPDTTEVVAGDVAKAVAARWAALPKETRDNTLLLTAGRAMRSEANQAVQAELKAAGEIASVGTRIEVLDRVNATREGARLLKGYQPGRVVEIRTDLPSQGFVRGDRGIVTAVERGRVRLEMRGGGEKHLQPDQLAKNLKYDAVSIYQPKQIKLHAGDRIRWTDNDHDRKLSNADIGRVEEVGAGRLVVSSLVDGTVHELKAGDRMAERLDLAYAINVHVAQGVTTDHGMLALRSGERRLLSERSFLVALTRIADKVALFVDDGRAVERGVSRNAGDKTSALETIGQAGTGTAIQMPATSPAIDTAVERYARLFLAVEQQAIDNQPTSTAQDREFGAAASALDWMRDNGAEDLRIVLDRGLGAPDAGRNDLGRLTQAWLQEGQIRTDRGAYAERFVADWKAVTADSMAATTNRNEAMVERRQERLETRMLREPALERALDRAMPERQLRIDEPGSGGRARDRDFGMEM
SIO_010081: PQ455_RS20835
subclass of: SO_0000673
so part of: PQ455_RS20835
location: complement(44201..47560)
location: region:44201-47560:-1
so has part: feature:44201-47560:-1:exon

WP_273692236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44201-47560:-1:exon

PQ455_RS20840
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20840
old locus tag: PQ455_20840
so part of: sequence
location: complement(47557..48387)
location: region:47557-48387:-1
so has part: feature:47557-48387:-1:exon
subclass of: SO_0000010

position:47557:-1
position: 47557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48387:-1
position: 48387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47557-48387:-1:exon

PQ455_RS20840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20840
old locus tag: PQ455_20840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTKIQVNIRLTPEEHARLLKCAGEAGLERAMFARDLVMEGLDRKAGGEPTAQRTLPGPGNIVAMDAMLNNAIMEVERFANKWAAHEAELLSLERKDRLAMHSARVEFLTGFPERISRSLEPIKAEMTAMKAAITDQPRLDAIDTKQAELVEAVQANTRAIRVIRKDPRKAFGIILADGGVWSTLFVCQWSLFMVAIGMFVISAFGMTLPGIGIPLAHKLAAGDAEFCRLIRYRFEVDGCQVPADHRIDAAAAPAAASGTSSRTKASASSAKAKRS
SIO_010081: PQ455_RS20840
subclass of: SO_0000673
so part of: PQ455_RS20840
location: complement(47557..48387)
location: region:47557-48387:-1
so has part: feature:47557-48387:-1:exon

WP_273692239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47557-48387:-1:exon

PQ455_RS20845
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20845
old locus tag: PQ455_20845
so part of: sequence
location: 48498..48923
location: region:48498-48923:1
so has part: feature:48498-48923:1:exon
subclass of: SO_0000010

position:48498:1
position: 48498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48923:1
position: 48923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48498-48923:1:exon

PQ455_RS20845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20845
old locus tag: PQ455_20845
inference: COORDINATES: protein motif:HMM:NF024252.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSQPSTLGARIKAIRRVAGMGQDALAQALGFSTRSLISWERDVVEPPLGVVRQLCRDHEVDVGWLVFGTDTTPARHHGPADWPRYERLLAMIEALRVDVGLRLKPGRCQVLARSLYDEGDDADADTRRRLRHMLLALSQGD
SIO_010081: PQ455_RS20845
subclass of: SO_0000673
so part of: PQ455_RS20845
location: 48498..48923
location: region:48498-48923:1
so has part: feature:48498-48923:1:exon

WP_273692243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48498-48923:1:exon

PQ455_RS20850
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20850
old locus tag: PQ455_20850
so part of: sequence
location: 48925..49065
location: region:48925-49065:1
so has part: feature:48925-49065:1:exon
subclass of: SO_0000010

position:48925:1
position: 48925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49065:1
position: 49065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48925-49065:1:exon

PQ455_RS20850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20850
old locus tag: PQ455_20850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQRSDRIMAEWADGNRLMGFERRDWGHLKVCHMDSGSRNKWSTKA
SIO_010081: PQ455_RS20850
subclass of: SO_0000673
so part of: PQ455_RS20850
location: 48925..49065
location: region:48925-49065:1
so has part: feature:48925-49065:1:exon

WP_273692246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48925-49065:1:exon

PQ455_RS20855
type: Gene
subclass of: SO_0000704
RO_0002162: 1813468
locus tag: PQ455_RS20855
old locus tag: PQ455_20855
so part of: sequence
location: complement(49148..49972)
location: region:49148-49972:-1
so has part: feature:49148-49972:-1:exon
subclass of: SO_0000010

position:49148:-1
position: 49148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49972:-1
position: 49972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49148-49972:-1:exon

PQ455_RS20855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1813468
locus tag: PQ455_RS20855
old locus tag: PQ455_20855
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIFALLLAASSPNSALEAERAYSEAVLASGRQAAARSFGPQSDPWPIQHAPETARSPSVASMLQAAESSRRWWLTMMSVESHAERRPELVFPSCDPSGSAVVIGGLYDGGNRVGSYKTLWRNSAEGWRWEIDDYRRDGSKALAAESLQAIEPECSAKLTNEQLQIQAVSDAKEIASVLRQEQAGKQVDWLAVPRRSVAEDVIFVGNDGRRIRRLPAKLPIRRIAGALSSGSSYDETLRWSSRVLDGSAQAHSFQITQWRGPKNGWQIVYYELRG
SIO_010081: PQ455_RS20855
subclass of: SO_0000673
so part of: PQ455_RS20855
location: complement(49148..49972)
location: region:49148-49972:-1
so has part: feature:49148-49972:-1:exon

WP_126014483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49148-49972:-1:exon