Peteryoungia desertarenae strain ADMK78 plasmid pPRADMK78_01.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
Genome sequence of Rhizobium sp strain ADMK78
Submitted (29-JUN-2020) National Centre for Microbial Resource, National Centre for Cell Science, First floor, Central Tower, Sai Trinity Building Garware Circle, Sutarwadi, Pune, Maharashtra 411021, India
Submitted (20-MAY-2019) National Centre for Microbial Resource, National Centre for Cell Science, First floor, Central Tower, Sai Trinity Building Garware Circle, Sutarwadi, Pune, Maharashtra 411021, India
REFSEQ INFORMATION: The reference sequence is identical to\nCP058351.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 19-JUN-2020\nAssembly Method :: Canu v. v. 2.0\nAssembly Name :: tig\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 82.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/06/2023 03:00:06\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,181\nCDSs (total) :: 4,115\nGenes (coding) :: 4,033\nCDSs (with protein) :: 4,033\nGenes (RNA) :: 66\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 4\nPseudo Genes (total) :: 82\nCDSs (without protein) :: 82\nPseudo Genes (ambiguous residues) :: 0 of 82\nPseudo Genes (frameshifted) :: 35 of 82\nPseudo Genes (incomplete) :: 52 of 82\nPseudo Genes (internal stop) :: 14 of 82\nPseudo Genes (multiple problems) :: 18 of 82\n##Genome-Annotation-Data-END##
type strain of Peteryoungia desertarenae
COORDINATES: similar to AA sequence:RefSeq:WP_006724760.1
GO:0046872 - metal ion binding [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006724761.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_020397483.1
COORDINATES: similar to AA sequence:RefSeq:WP_020809501.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003521273.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006724765.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006724766.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020812887.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006724768.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_003492332.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611359.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008943664.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014743791.1
COORDINATES: similar to AA sequence:RefSeq:WP_007002033.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024835.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008568585.1
COORDINATES: protein motif:HMM:NF013584.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF012264.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008382400.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025004.2
gluconate 2-dehydrogenase subunit 3 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003576418.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003576420.1
COORDINATES: similar to AA sequence:RefSeq:WP_013066816.1
COORDINATES: protein motif:HMM:NF015338.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013032939.1
COORDINATES: similar to AA sequence:RefSeq:WP_019954751.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007204689.1
COORDINATES: similar to AA sequence:RefSeq:WP_014132938.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_019955860.1
GO:0005215 - transporter activity [Evidence IEA]
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019955859.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007206495.1
COORDINATES: similar to AA sequence:RefSeq:WP_012415803.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006728247.1
COORDINATES: similar to AA sequence:RefSeq:WP_017275457.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010975338.1
dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010975337.1
COORDINATES: similar to AA sequence:RefSeq:WP_003526465.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020041980.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019962934.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020041978.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008888148.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020041976.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008888235.1
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003510763.1
COORDINATES: similar to AA sequence:RefSeq:WP_019172602.1
osmoprotectant NAGGN system M42 family peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_008281733.1
COORDINATES: similar to AA sequence:RefSeq:WP_014130952.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012555993.1
COORDINATES: similar to AA sequence:RefSeq:WP_018065763.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007878517.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007800842.1
COORDINATES: similar to AA sequence:RefSeq:WP_007606261.1
COORDINATES: similar to AA sequence:RefSeq:WP_007817540.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003566682.1
COORDINATES: similar to AA sequence:RefSeq:WP_017995225.1
COORDINATES: similar to AA sequence:RefSeq:WP_014765224.1
COORDINATES: similar to AA sequence:RefSeq:WP_004678014.1
COORDINATES: similar to AA sequence:RefSeq:WP_020011125.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014763764.1
COORDINATES: similar to AA sequence:RefSeq:WP_018096419.1
COORDINATES: similar to AA sequence:RefSeq:WP_006310925.1
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003535253.1
COORDINATES: similar to AA sequence:RefSeq:WP_010658949.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013845085.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007600763.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018096425.1
COORDINATES: similar to AA sequence:RefSeq:WP_006728197.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018495563.1
GO:0016836 - hydro-lyase activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015670087.1
COORDINATES: similar to AA sequence:RefSeq:WP_019966347.1
COORDINATES: similar to AA sequence:RefSeq:WP_006313519.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654083.1
COORDINATES: protein motif:HMM:NF014898.2
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013653996.1
GO:0005216 - monoatomic ion channel activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014989226.1
COORDINATES: similar to AA sequence:RefSeq:WP_014857971.1
COORDINATES: similar to AA sequence:RefSeq:WP_014857970.1
COORDINATES: similar to AA sequence:RefSeq:WP_007759093.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF024317.2
COORDINATES: similar to AA sequence:RefSeq:WP_006728322.1
hydroxypyruvate isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013760951.1
COORDINATES: similar to AA sequence:RefSeq:WP_007636151.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012477327.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007604307.1
COORDINATES: similar to AA sequence:RefSeq:WP_019965530.1
COORDINATES: similar to AA sequence:RefSeq:WP_007604294.1
DNA-binding transcriptional regulator KdgR
COORDINATES: similar to AA sequence:RefSeq:WP_006092803.1
COORDINATES: similar to AA sequence:RefSeq:WP_007254945.1
COORDINATES: similar to AA sequence:RefSeq:WP_007254946.1
COORDINATES: similar to AA sequence:RefSeq:WP_003521854.1
COORDINATES: similar to AA sequence:RefSeq:WP_009670665.1
COORDINATES: protein motif:HMM:NF016513.2
COORDINATES: similar to AA sequence:RefSeq:WP_002718003.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017979923.1
COORDINATES: similar to AA sequence:RefSeq:WP_019956202.1
COORDINATES: similar to AA sequence:RefSeq:WP_017992291.1
GO:0004039 - allophanate hydrolase activity [Evidence IEA]
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015916211.1
5-oxoprolinase/urea amidolyase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009109954.1
urea carboxylase-associated family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009109957.1
COORDINATES: similar to AA sequence:RefSeq:WP_015343546.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019953376.1
COORDINATES: similar to AA sequence:RefSeq:WP_018496130.1
putative urea ABC transporter substrate-binding protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00442
guanidine-I (ykkC/yxkD leader) riboswitch; Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria; This is class of guanidine riboswitches is based on the ykkC/yxkD leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_016736809.1
COORDINATES: similar to AA sequence:RefSeq:WP_006936155.1
COORDINATES: similar to AA sequence:RefSeq:WP_018064518.1
C4-dicarboxylate TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013653232.1
COORDINATES: similar to AA sequence:RefSeq:WP_018064516.1
COORDINATES: similar to AA sequence:RefSeq:WP_012653495.1
COORDINATES: protein motif:HMM:NF020039.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012655074.1
COORDINATES: similar to AA sequence:RefSeq:WP_015341239.1
COORDINATES: similar to AA sequence:RefSeq:WP_006330086.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018329332.1
COORDINATES: similar to AA sequence:RefSeq:WP_007605400.1
COORDINATES: similar to AA sequence:RefSeq:WP_017967109.1
COORDINATES: similar to AA sequence:RefSeq:WP_018094283.1
COORDINATES: similar to AA sequence:RefSeq:WP_006727899.1
COORDINATES: similar to AA sequence:RefSeq:WP_018426412.1
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_017998923.1
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_019965281.1
GO:0004540 - ribonuclease activity [Evidence IEA]
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_003528894.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
COORDINATES: similar to AA sequence:RefSeq:WP_019644329.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006727896.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019644327.1
COORDINATES: similar to AA sequence:RefSeq:WP_017267166.1
COORDINATES: similar to AA sequence:RefSeq:WP_006934863.1
COORDINATES: similar to AA sequence:RefSeq:WP_006727894.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555048.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: similar to AA sequence:RefSeq:WP_018065028.1
COORDINATES: protein motif:HMM:TIGR00229.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012742.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF013539.2
MurR/RpiR family transcriptional regulator
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019954381.1
COORDINATES: similar to AA sequence:RefSeq:WP_019954382.1
COORDINATES: protein motif:HMM:NF016817.2
COORDINATES: similar to AA sequence:RefSeq:WP_019954384.1
COORDINATES: similar to AA sequence:RefSeq:WP_008557326.1
COORDINATES: protein motif:HMM:NF024242.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003526806.1
COORDINATES: similar to AA sequence:RefSeq:WP_013851101.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_052642687.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019565754.1
COORDINATES: similar to AA sequence:RefSeq:WP_018114727.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019964142.1
COORDINATES: protein motif:HMM:NF020771.2
CerR family C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015314240.1
COORDINATES: protein motif:HMM:NF037521.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008530435.1
COORDINATES: similar to AA sequence:RefSeq:WP_019956425.1
COORDINATES: similar to AA sequence:RefSeq:WP_015308785.1
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016701.2
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_006969371.1
GO:0019172 - glyoxalase III activity [Evidence IEA]
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: protein motif:HMM:NF018479.2
COORDINATES: similar to AA sequence:RefSeq:WP_007198578.1
COORDINATES: similar to AA sequence:RefSeq:WP_007198579.1
COORDINATES: similar to AA sequence:RefSeq:WP_007198580.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611421.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012649181.1
COORDINATES: protein motif:HMM:NF024792.2
pilus assembly protein TadG-related protein
COORDINATES: protein motif:HMM:NF019428.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_007603607.1
COORDINATES: protein motif:HMM:NF028169.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR02971.1
COORDINATES: similar to AA sequence:RefSeq:WP_008548899.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013652214.1
COORDINATES: similar to AA sequence:RefSeq:WP_003505555.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558248.1
COORDINATES: similar to AA sequence:RefSeq:WP_003539555.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012115378.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_003600345.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017483082.1
COORDINATES: similar to AA sequence:RefSeq:WP_012330176.1
COORDINATES: protein motif:HMM:NF024834.2
COORDINATES: similar to AA sequence:RefSeq:WP_009566108.1
COORDINATES: similar to AA sequence:RefSeq:WP_007256036.1
COORDINATES: protein motif:HMM:NF012344.2
COORDINATES: similar to AA sequence:RefSeq:WP_020721372.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012720.2
COORDINATES: protein motif:HMM:NF021214.2
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006727862.1
COORDINATES: similar to AA sequence:RefSeq:WP_002723350.1
COORDINATES: similar to AA sequence:RefSeq:WP_012650505.1
COORDINATES: similar to AA sequence:RefSeq:WP_011982890.1
COORDINATES: protein motif:HMM:NF024248.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006725123.1
COORDINATES: protein motif:HMM:NF019421.2
COORDINATES: similar to AA sequence:RefSeq:WP_007773203.1
nucleotidyltransferase and HEPN domain-containing protein
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_011652603.1
COORDINATES: similar to AA sequence:RefSeq:WP_020812560.1
COORDINATES: similar to AA sequence:RefSeq:WP_009764153.1
COORDINATES: similar to AA sequence:RefSeq:WP_007598449.1
COORDINATES: similar to AA sequence:RefSeq:WP_007598450.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006727874.1
COORDINATES: similar to AA sequence:RefSeq:WP_012115346.1
GO:0047448 - 5-dehydro-4-deoxyglucarate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007598013.1
COORDINATES: similar to AA sequence:RefSeq:WP_010658603.1
COORDINATES: protein motif:HMM:TIGR03660.1
COORDINATES: protein motif:HMM:NF039867.1
DUF5801 repeats-in-toxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007789236.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006726349.1
COORDINATES: similar to AA sequence:RefSeq:WP_006726348.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006726347.1
ribbon-helix-helix domain-containing protein
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_011004690.1
COORDINATES: similar to AA sequence:RefSeq:WP_006271648.1
COORDINATES: protein motif:HMM:NF017815.2
transglutaminase-like cysteine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_006726345.1
COORDINATES: similar to AA sequence:RefSeq:WP_006726344.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006726343.1
COORDINATES: similar to AA sequence:RefSeq:WP_018064132.1
COORDINATES: similar to AA sequence:RefSeq:WP_006726341.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006726340.1
GO:0070497 - 6-carboxy-5,6,7,8-tetrahydropterin synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007606134.1
COORDINATES: similar to AA sequence:RefSeq:WP_006726338.1
COORDINATES: similar to AA sequence:RefSeq:WP_007606126.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007606125.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007606124.1
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007598822.1
COORDINATES: similar to AA sequence:RefSeq:WP_006726333.1
COORDINATES: similar to AA sequence:RefSeq:WP_016737146.1
GO:0018659 - 4-hydroxybenzoate 3-monooxygenase activity [Evidence IEA]
GO:0018874 - benzoate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006726330.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003499344.1
COORDINATES: protein motif:HMM:NF013593.2
COORDINATES: protein motif:HMM:NF012234.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014763609.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_007694647.1
COORDINATES: similar to AA sequence:RefSeq:WP_013692566.1
COORDINATES: similar to AA sequence:RefSeq:WP_007990003.1
COORDINATES: similar to AA sequence:RefSeq:WP_012394071.1
COORDINATES: similar to AA sequence:RefSeq:WP_003465730.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003476212.1
COORDINATES: similar to AA sequence:RefSeq:WP_011650551.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611590.1
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611442.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611557.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011907782.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611562.1
COORDINATES: similar to AA sequence:RefSeq:WP_014208769.1
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF033517.1
COORDINATES: similar to AA sequence:RefSeq:WP_014989244.1
COORDINATES: protein motif:HMM:NF017528.2
COORDINATES: similar to AA sequence:RefSeq:WP_013845260.1
COORDINATES: similar to AA sequence:RefSeq:WP_018113670.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611444.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015886710.1
COORDINATES: protein motif:HMM:TIGR02292.1
COORDINATES: similar to AA sequence:RefSeq:WP_010875332.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970376.1
COORDINATES: similar to AA sequence:RefSeq:WP_011983064.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611156.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611221.1
COORDINATES: similar to AA sequence:RefSeq:WP_018293052.1
GO:0019180 - dTDP-4-amino-4,6-dideoxygalactose transaminase activity [Evidence IEA]
GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
dTDP-4-amino-4,6-dideoxygalactose transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_017449820.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018913889.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF016908.2
COORDINATES: similar to AA sequence:RefSeq:WP_011645824.1
COORDINATES: similar to AA sequence:RefSeq:WP_015318711.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018859990.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200275.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]; GO:0070401 - NADP+ binding [Evidence IEA]
GO:0042351 - 'de novo' GDP-L-fucose biosynthetic process [Evidence IEA]; GO:0019673 - GDP-mannose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611342.1
COORDINATES: similar to AA sequence:RefSeq:WP_015918134.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611949.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014531097.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188732.1
COORDINATES: similar to AA sequence:RefSeq:WP_011053350.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612082.1
COORDINATES: protein motif:HMM:NF013255.2
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_086558208.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008508376.1
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_013236147.1
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: similar to AA sequence:RefSeq:WP_006728320.1
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: similar to AA sequence:RefSeq:WP_007599304.1
COORDINATES: similar to AA sequence:RefSeq:WP_007758386.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014332404.1
COORDINATES: protein motif:HMM:NF015437.2
autoinducer binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010967506.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF012698.2
COORDINATES: similar to AA sequence:RefSeq:WP_018097203.1
COORDINATES: similar to AA sequence:RefSeq:WP_015887155.1
COORDINATES: similar to AA sequence:RefSeq:WP_008529719.1
COORDINATES: similar to AA sequence:RefSeq:WP_010974390.1
COORDINATES: similar to AA sequence:RefSeq:WP_007538973.1
COORDINATES: similar to AA sequence:RefSeq:WP_006468235.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017958126.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018097196.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_010140642.1
GO:0015891 - siderophore transport [Evidence IEA]
iron-siderophore ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008330883.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006939516.1
COORDINATES: similar to AA sequence:RefSeq:WP_006939515.1
COORDINATES: similar to AA sequence:RefSeq:WP_007598432.1
COORDINATES: similar to AA sequence:RefSeq:WP_007692673.1
COORDINATES: similar to AA sequence:RefSeq:WP_020047714.1
COORDINATES: similar to AA sequence:RefSeq:WP_008876062.1
COORDINATES: similar to AA sequence:RefSeq:WP_007689183.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246957.1
COORDINATES: similar to AA sequence:RefSeq:WP_017268833.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015342740.1
COORDINATES: similar to AA sequence:RefSeq:WP_008226434.1
COORDINATES: similar to AA sequence:RefSeq:WP_013689786.1
GO:0016829 - lyase activity [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006725143.1
COORDINATES: similar to AA sequence:RefSeq:WP_007196341.1
COORDINATES: similar to AA sequence:RefSeq:WP_007196342.1
TRAP transporter substrate-binding protein DctP
COORDINATES: similar to AA sequence:RefSeq:WP_007196343.1
COORDINATES: similar to AA sequence:RefSeq:WP_004129936.1
COORDINATES: similar to AA sequence:RefSeq:WP_007539595.1
COORDINATES: similar to AA sequence:RefSeq:WP_009452543.1
COORDINATES: similar to AA sequence:RefSeq:WP_018098144.1
COORDINATES: protein motif:HMM:NF012993.2
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: protein motif:HMM:NF024553.2
GO:0006260 - DNA replication [Evidence IEA]
DUF3991 and TOPRIM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003816713.1
COORDINATES: similar to AA sequence:RefSeq:WP_014777407.1
cephalosporin hydroxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009205565.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007759198.1
COORDINATES: similar to AA sequence:RefSeq:WP_006206284.1
dTDP-4-dehydrorhamnose 3,5-epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014235198.1
GO:0047733 - CDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006387502.1
GO:0047343 - glucose-1-phosphate cytidylyltransferase activity [Evidence IEA]
glucose-1-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017962838.1
COORDINATES: similar to AA sequence:RefSeq:WP_003571040.1
COORDINATES: similar to AA sequence:RefSeq:WP_012630518.1
COORDINATES: similar to AA sequence:RefSeq:WP_017671912.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007797542.1
COORDINATES: similar to AA sequence:RefSeq:WP_003519178.1
COORDINATES: similar to AA sequence:RefSeq:WP_007790974.1
COORDINATES: protein motif:HMM:NF015397.2
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006954973.1
COORDINATES: similar to AA sequence:RefSeq:WP_009465951.1
COORDINATES: similar to AA sequence:RefSeq:WP_011509168.1
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: similar to AA sequence:RefSeq:WP_008946277.1
COORDINATES: similar to AA sequence:RefSeq:WP_006931338.1
COORDINATES: similar to AA sequence:RefSeq:WP_008536752.1
COORDINATES: similar to AA sequence:RefSeq:WP_017988596.1
COORDINATES: similar to AA sequence:RefSeq:WP_018687869.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_018303575.1
COORDINATES: similar to AA sequence:RefSeq:WP_015668613.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016703 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) [Evidence IEA]
COORDINATES: protein motif:HMM:NF018294.2
COORDINATES: protein motif:HMM:NF013933.2
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020796402.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038698.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_012591607.1
COORDINATES: similar to AA sequence:RefSeq:WP_013801325.1
COORDINATES: similar to AA sequence:RefSeq:WP_004125765.1
COORDINATES: similar to AA sequence:RefSeq:WP_008335662.1
COORDINATES: similar to AA sequence:RefSeq:WP_007827581.1
COORDINATES: similar to AA sequence:RefSeq:WP_041684032.1
COORDINATES: similar to AA sequence:RefSeq:WP_008536871.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427422.1
COORDINATES: similar to AA sequence:RefSeq:WP_004126663.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018494251.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018328357.1
hybrid-cluster NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_011747520.1
COORDINATES: similar to AA sequence:RefSeq:WP_011649280.1
COORDINATES: similar to AA sequence:RefSeq:WP_009022636.1
COORDINATES: similar to AA sequence:RefSeq:WP_007800572.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine, L-proline or other amino acids, choline, carnitine, etc. The substrate specificity is best determined from the substrate-binding subunit, rather than this subunit, as it interacts with the permease subunit and not with substrate directly.; Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine, L-proline or other amino acids, choline, carnitine, etc. The substrate specificity is best determined from the substrate-binding subunit, rather than this subunit, as it interacts with the permease subunit and not with substrate directly; Derived by automated computational analysis using gene prediction method: Protein Homology.
betaine/proline/choline family ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011747285.1
proline/glycine betaine ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014331022.1
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007801497.1
COORDINATES: similar to AA sequence:RefSeq:WP_007801495.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007801493.1
COORDINATES: similar to AA sequence:RefSeq:WP_009819423.1
COORDINATES: similar to AA sequence:RefSeq:WP_015271372.1
COORDINATES: similar to AA sequence:RefSeq:WP_006725132.1
COORDINATES: similar to AA sequence:RefSeq:WP_016488480.1
COORDINATES: similar to AA sequence:RefSeq:WP_004110222.1
COORDINATES: similar to AA sequence:RefSeq:WP_026155209.1
COORDINATES: similar to AA sequence:RefSeq:WP_018330151.1
COORDINATES: similar to AA sequence:RefSeq:WP_017274410.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007607456.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013891709.1
COORDINATES: similar to AA sequence:RefSeq:WP_007600076.1
COORDINATES: similar to AA sequence:RefSeq:WP_003526569.1
COORDINATES: similar to AA sequence:RefSeq:WP_015243257.1
COORDINATES: similar to AA sequence:RefSeq:WP_007600082.1
COORDINATES: similar to AA sequence:RefSeq:WP_003567609.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008528564.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007597277.1
COORDINATES: similar to AA sequence:RefSeq:WP_018855336.1
GO:0008864 - formyltetrahydrofolate deformylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007700140.1
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_018183595.1
COORDINATES: similar to AA sequence:RefSeq:WP_006727180.1
COORDINATES: similar to AA sequence:RefSeq:WP_006727179.1
phytanoyl-CoA dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006727178.1
COORDINATES: similar to AA sequence:RefSeq:WP_017963751.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971025.1
COORDINATES: similar to AA sequence:RefSeq:WP_006724019.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017269484.1
COORDINATES: similar to AA sequence:RefSeq:WP_003590941.1
GSU2403 family nucleotidyltransferase fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_003501643.1
type II toxin-antitoxin system HipA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_003501645.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517424.1
COORDINATES: similar to AA sequence:RefSeq:WP_009807491.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]; GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_003532417.1
COORDINATES: similar to AA sequence:RefSeq:WP_013850651.1
COORDINATES: similar to AA sequence:RefSeq:WP_018406961.1
COORDINATES: similar to AA sequence:RefSeq:WP_014530394.1
COORDINATES: similar to AA sequence:RefSeq:WP_018009940.1
COORDINATES: protein motif:HMM:TIGR01730.1
COORDINATES: similar to AA sequence:RefSeq:WP_016353995.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480553.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006728252.1
COORDINATES: similar to AA sequence:RefSeq:WP_018067720.1
COORDINATES: similar to AA sequence:RefSeq:WP_006940371.1
COORDINATES: similar to AA sequence:RefSeq:WP_009467379.1
COORDINATES: similar to AA sequence:RefSeq:WP_006940373.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006940374.1
COORDINATES: similar to AA sequence:RefSeq:WP_010970554.1
COORDINATES: similar to AA sequence:RefSeq:WP_007197846.1
COORDINATES: similar to AA sequence:RefSeq:WP_004689045.1
COORDINATES: similar to AA sequence:RefSeq:WP_018634002.1
COORDINATES: similar to AA sequence:RefSeq:WP_012709784.1
COORDINATES: similar to AA sequence:RefSeq:WP_011457051.1
COORDINATES: similar to AA sequence:RefSeq:WP_007197840.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011457053.1
COORDINATES: similar to AA sequence:RefSeq:WP_011457054.1
COORDINATES: similar to AA sequence:RefSeq:WP_018323658.1
COORDINATES: protein motif:HMM:NF019474.2
alpha/beta hydrolase fold domain-containing protein
COORDINATES: protein motif:HMM:NF024799.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_019014839.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611806.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009571966.1
COORDINATES: similar to AA sequence:RefSeq:WP_009450712.1
COORDINATES: protein motif:HMM:NF025878.2
COORDINATES: similar to AA sequence:RefSeq:WP_010137788.1
COORDINATES: similar to AA sequence:RefSeq:WP_019956275.1
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: similar to AA sequence:RefSeq:WP_018387883.1
COORDINATES: similar to AA sequence:RefSeq:WP_018387882.1
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: protein motif:HMM:NF011987.0
alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase
COORDINATES: protein motif:HMM:TIGR02325.1
phosphonate metabolism transcriptional regulator PhnF
COORDINATES: similar to AA sequence:RefSeq:WP_006724778.1
COORDINATES: similar to AA sequence:RefSeq:WP_012653485.1
galactofuranose ABC transporter, permease protein YjfF
COORDINATES: similar to AA sequence:RefSeq:WP_006724780.1
COORDINATES: similar to AA sequence:RefSeq:WP_006724781.1
COORDINATES: similar to AA sequence:RefSeq:WP_018099144.1
galactofuranose ABC transporter, galactofuranose-binding protein YtfQ
COORDINATES: similar to AA sequence:RefSeq:WP_003582386.1
COORDINATES: similar to AA sequence:RefSeq:WP_006726987.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020051689.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007527748.1
COORDINATES: similar to AA sequence:RefSeq:WP_012652403.1
COORDINATES: similar to AA sequence:RefSeq:WP_006726991.1
COORDINATES: similar to AA sequence:RefSeq:WP_006726992.1
COORDINATES: similar to AA sequence:RefSeq:WP_018116989.1
COORDINATES: similar to AA sequence:RefSeq:WP_002937848.1
COORDINATES: similar to AA sequence:RefSeq:WP_020090550.1
COORDINATES: similar to AA sequence:RefSeq:WP_018387096.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
GO:0015840 - urea transport [Evidence IEA]
urea ABC transporter ATP-binding subunit UrtE
COORDINATES: similar to AA sequence:RefSeq:WP_018387095.1
urea ABC transporter ATP-binding protein UrtD
COORDINATES: similar to AA sequence:RefSeq:WP_008734075.1
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
urea ABC transporter permease subunit UrtC
COORDINATES: similar to AA sequence:RefSeq:WP_007815898.1
urea ABC transporter permease subunit UrtB
COORDINATES: similar to AA sequence:RefSeq:WP_020208381.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]; GO:0033219 - urea binding [Evidence IEA]
urea ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012383976.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271834.1
COORDINATES: similar to AA sequence:RefSeq:WP_015915797.1
COORDINATES: similar to AA sequence:RefSeq:WP_020043865.1
COORDINATES: similar to AA sequence:RefSeq:WP_008279862.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006724876.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003595677.1
COORDINATES: similar to AA sequence:RefSeq:WP_015688082.1
COORDINATES: similar to AA sequence:RefSeq:WP_006725342.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012654174.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538859.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011425074.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0042128 - nitrate assimilation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014331721.1
COORDINATES: similar to AA sequence:RefSeq:WP_017265414.1
GO:0015414 - ABC-type nitrate transporter activity [Evidence IEA]
GO:0015706 - nitrate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015952673.1
COORDINATES: similar to AA sequence:RefSeq:WP_004672220.1
CmpA/NrtA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007628377.1
ANTAR domain-containing response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006727880.1
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: similar to AA sequence:RefSeq:WP_004439870.1
COORDINATES: similar to AA sequence:RefSeq:WP_008282280.1
COORDINATES: similar to AA sequence:RefSeq:WP_010971611.1
COORDINATES: similar to AA sequence:RefSeq:WP_005859350.1
crotonase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019963754.1
COORDINATES: similar to AA sequence:RefSeq:WP_006312498.1
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_003510718.1
COORDINATES: similar to AA sequence:RefSeq:WP_007756661.1
GO:0009027 - tartrate dehydrogenase activity [Evidence IEA]
GO:0046395 - carboxylic acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007198673.1
COORDINATES: similar to AA sequence:RefSeq:WP_013962400.1
COORDINATES: similar to AA sequence:RefSeq:WP_011909020.1
COORDINATES: similar to AA sequence:RefSeq:WP_014879583.1
acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011048490.1
carboxyl transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008885961.1
COORDINATES: similar to AA sequence:RefSeq:WP_002968376.1
COORDINATES: similar to AA sequence:RefSeq:WP_018238183.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010398780.1
GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013069129.1
COORDINATES: similar to AA sequence:RefSeq:WP_010392213.1
COORDINATES: similar to AA sequence:RefSeq:WP_002719436.1
COORDINATES: similar to AA sequence:RefSeq:WP_011048975.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014876154.1
COORDINATES: similar to AA sequence:RefSeq:WP_019955592.1
COORDINATES: similar to AA sequence:RefSeq:WP_005979928.1
COORDINATES: similar to AA sequence:RefSeq:WP_020040825.1
COORDINATES: similar to AA sequence:RefSeq:WP_005977031.1
COORDINATES: similar to AA sequence:RefSeq:WP_012760465.1
GO:0045282 - plasma membrane succinate dehydrogenase complex [Evidence IEA]
GO:0000104 - succinate dehydrogenase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
succinate dehydrogenase, hydrophobic membrane anchor protein
COORDINATES: similar to AA sequence:RefSeq:WP_011428260.1
GO:0032955 - regulation of division septum assembly [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_003506498.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548119.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007596465.1
GO:0008442 - 3-hydroxyisobutyrate dehydrogenase activity [Evidence IEA]
GO:0006574 - valine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011427700.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010970299.1
GO:0006096 - glycolytic process [Evidence IEA]
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018071836.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_017274142.1
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012092549.1
COORDINATES: similar to AA sequence:RefSeq:WP_006491472.1
COORDINATES: similar to AA sequence:RefSeq:WP_003500312.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019962907.1
COORDINATES: similar to AA sequence:RefSeq:WP_013963320.1
COORDINATES: similar to AA sequence:RefSeq:WP_010437560.1
COORDINATES: similar to AA sequence:RefSeq:WP_009504263.1
GO:0004334 - fumarylacetoacetase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011539935.1
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009803854.1
COORDINATES: similar to AA sequence:RefSeq:WP_008557083.1
GO:0016034 - maleylacetoacetate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008887705.1
COORDINATES: similar to AA sequence:RefSeq:WP_015781526.1
COORDINATES: similar to AA sequence:RefSeq:WP_018324553.1
COORDINATES: similar to AA sequence:RefSeq:WP_015343654.1
COORDINATES: similar to AA sequence:RefSeq:WP_018095572.1
COORDINATES: similar to AA sequence:RefSeq:WP_004112137.1
COORDINATES: similar to AA sequence:RefSeq:WP_018073814.1
COORDINATES: similar to AA sequence:RefSeq:WP_015343694.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654375.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007603731.1
COORDINATES: similar to AA sequence:RefSeq:WP_018486132.1
COORDINATES: similar to AA sequence:RefSeq:WP_018899851.1
GO:0004328 - formamidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018855620.1
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_012706457.1
COORDINATES: similar to AA sequence:RefSeq:WP_007826659.1
COORDINATES: similar to AA sequence:RefSeq:WP_007537284.1
COORDINATES: similar to AA sequence:RefSeq:WP_006728108.1
COORDINATES: similar to AA sequence:RefSeq:WP_006728107.1
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007822559.1
COORDINATES: similar to AA sequence:RefSeq:WP_020049605.1
GO:0003868 - 4-hydroxyphenylpyruvate dioxygenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025107.2
COORDINATES: similar to AA sequence:RefSeq:WP_018304714.1
COORDINATES: similar to AA sequence:RefSeq:WP_009211335.1
COORDINATES: similar to AA sequence:RefSeq:WP_020395952.1
COORDINATES: similar to AA sequence:RefSeq:WP_010875051.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654078.1
COORDINATES: similar to AA sequence:RefSeq:WP_017269639.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611153.1
COORDINATES: similar to AA sequence:RefSeq:WP_003538570.1
COORDINATES: similar to AA sequence:RefSeq:WP_011427715.1
COORDINATES: similar to AA sequence:RefSeq:WP_007825590.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555542.1
COORDINATES: similar to AA sequence:RefSeq:WP_008532554.1
COORDINATES: similar to AA sequence:RefSeq:WP_018495337.1
COORDINATES: similar to AA sequence:RefSeq:WP_011983044.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009565482.1
COORDINATES: similar to AA sequence:RefSeq:WP_013836307.1
COORDINATES: similar to AA sequence:RefSeq:WP_019460833.1
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019998286.1
GO:0005507 - copper ion binding [Evidence IEA]
GO:0055070 - copper ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007602673.1
COORDINATES: similar to AA sequence:RefSeq:WP_006724750.1
COORDINATES: similar to AA sequence:RefSeq:WP_013636864.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007692642.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968441.1
COORDINATES: similar to AA sequence:RefSeq:WP_007602692.1
COORDINATES: similar to AA sequence:RefSeq:WP_006724755.1
COORDINATES: similar to AA sequence:RefSeq:WP_006724756.1
COORDINATES: similar to AA sequence:RefSeq:WP_006724757.1
COORDINATES: similar to AA sequence:RefSeq:WP_018009376.1
COORDINATES: similar to AA sequence:RefSeq:WP_007682494.1