Mycobacterium ulcerans strain JKD8049 plasmid pMUM004, complete sequence.
type: Entry
definition: Mycobacterium ulcerans strain JKD8049 plasmid pMUM004, complete sequence.
sequence version: NZ_CP085201.1
sequence date: 2023-03-26
sequence: sequence
division: CON
label: NZ_CP085201.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN22253492
keyword: RefSeq
source: Mycobacterium ulcerans
organism: Mycobacterium ulcerans
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium ulcerans group.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP085201.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2021\nAssembly Method :: FLYE v. 2021\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 240.0x\nSequencing Technology :: Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/26/2023 08:00:01\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,201\nCDSs (total) :: 5,149\nGenes (coding) :: 4,314\nCDSs (with protein) :: 4,314\nGenes (RNA) :: 52\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 3\nPseudo Genes (total) :: 835\nCDSs (without protein) :: 835\nPseudo Genes (ambiguous residues) :: 0 of 835\nPseudo Genes (frameshifted) :: 457 of 835\nPseudo Genes (incomplete) :: 333 of 835\nPseudo Genes (internal stop) :: 188 of 835\nPseudo Genes (multiple problems) :: 133 of 835\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 161798
topology: circular
so has quality: SO_0000988
location: 1..161798
location: region:1-161798:1
RO_0002162: 1809

NZ_CP085201
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN22253492
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Mycobacterium ulcerans strain JKD8049
author: Vandelannoote, K.
author: Buultjens, A.H.
author: Stinear, T.P.
journal: Unpublished

2
title: Direct Submission
author: Vandelannoote, K.
author: Buultjens, A.H.
author: Stinear, T.P.
journal: Submitted (15-OCT-2021) Doherty Applied Microbial Genomics, Microbiology and Immunology, University of Melbourne, 792 Elizabeth St, Melbourne, Victoria 3000, Australia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161798:1
position: 161798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-161798:1:source
so part of: sequence
organism: Mycobacterium ulcerans
mol type: genomic DNA
strain: JKD8049
host: Homo sapiens
plasmid: pMUM004
country: Australia: Point Lonsdale, Victoria
lat lon: 38.2833 S 144.6000 E
collection date: 2004
collected by: Victorian Infectious Diseases Reference Laboratory

1809
type: Taxonomy
SIO_000068: taxonomy

LH162_RS25710
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25710
old locus tag: LH162_25710
so part of: sequence
location: 610..2154
location: region:610-2154:1
so has part: feature:610-2154:1:exon
subclass of: SO_0000010

72436723
type: Gene
SIO_000068: ncbigene

position:610:1
position: 610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2154:1
position: 2154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610-2154:1:exon

LH162_RS25710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25710
old locus tag: LH162_25710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007172133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4226 domain-containing protein
translation: MTGWADVVLSEVFGGVSEVLGSPFPQTPSPHDAVSSVPITSTDQLTPLDRAKLTYMGIDPDSAGLDQINRALGRDQPLSVPPPAAPPPRPTTPAATPPNPDSPELRGAAAEAAKRLDEALARNHSAINDADDQLADAVLKASSSSAEGHQRLQRLQQEIIDEIDKLGSSLDTPAGQQQLAEFLQGKTGDILNVLKNAGLDSDSQARVLDGLSARYRGLHHDAGSDETPASDGQPQDATTSSGDAPPSTGDGGEDGLPAADPLLDGLASDPLLSGLGIMAGPAMGALGSLPGALGSAIPSLGGGGLGGAGLGDLGSALGSALHDGAAPSELDSDEHVEPLTETPQSNPEDDQSPDPTQPAGLADHGRDHPQLGDSDDAAAPAQPLEASTQVELPDQSVRTAGSSALATAGRAVLAGENIDDAYAAAQVQLPPPGAPISAPISPGRLQFGDVGQYTDHRVMALDKDHVWLNRQVTPIDQLETGPNFLGWTRPSTTTSTLTSVTTQPAPLTPATEPS
SIO_010081: LH162_RS25710
subclass of: SO_0000673
so part of: LH162_RS25710
location: 610..2154
location: region:610-2154:1
so has part: feature:610-2154:1:exon

WP_240273225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:610-2154:1:exon

LH162_RS25715
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25715
old locus tag: LH162_25715
so part of: sequence
location: 2217..2489
location: region:2217-2489:1
so has part: feature:2217-2489:1:exon
subclass of: SO_0000010

72436724
type: Gene
SIO_000068: ncbigene

position:2217:1
position: 2217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2489:1
position: 2489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2217-2489:1:exon

LH162_RS25715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25715
old locus tag: LH162_25715
inference: COORDINATES: protein motif:HMM:NF022280.2
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VII secretion target
translation: MRWAITQEHAADRCASARAENPHAIATAESWGPLFAEARRATVDAVNAREATLREQEEQHRAMARQLRIAAARMEEMDAENRAALTISTD
SIO_010081: LH162_RS25715
subclass of: SO_0000673
so part of: LH162_RS25715
location: 2217..2489
location: region:2217-2489:1
so has part: feature:2217-2489:1:exon

WP_011178557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2217-2489:1:exon

LH162_RS25720
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25720
old locus tag: LH162_25720
so part of: sequence
location: 2496..2795
location: region:2496-2795:1
so has part: feature:2496-2795:1:exon
subclass of: SO_0000010

72436725
type: Gene
SIO_000068: ncbigene

position:2496:1
position: 2496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2795:1
position: 2795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2496-2795:1:exon

LH162_RS25720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25720
old locus tag: LH162_25720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007172135.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFEARLTDYDTVVFEAASHDESIVVAVGRGGNALGVELQAPAMALTDAELANRIVKLNTLAHLRSQAALRHEWEAQHVNVSATLPTEDQVAGYEALIDF
SIO_010081: LH162_RS25720
subclass of: SO_0000673
so part of: LH162_RS25720
location: 2496..2795
location: region:2496-2795:1
so has part: feature:2496-2795:1:exon

WP_011178556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2496-2795:1:exon

LH162_RS26510
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26510
so part of: sequence
location: 2847..4397
location: region:2847-4397:1
so has part: feature:2847-4397:1:exon
subclass of: SO_0000010

75523366
type: Gene
SIO_000068: ncbigene

position:2847:1
position: 2847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4397:1
position: 4397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2847-4397:1:exon

LH162_RS26510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26510
inference: COORDINATES: protein motif:HMM:NF013127.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAADLGSAASALAGLAAQPLVHPPLATDAVSMSAAARLSGHGAVVASRALDGAAVLEAGAQAITQAALGYAAMDEANRAVVSLQGSPGAPTPTLVSAVTADVVAPGVPIAAPAAQPAETTAAMIEAGRPAAGDGFVSGCAALSKGFREGAVSARSAAIAVSEHLSGQAGSRISAALNRYADWAQEMAGYAEAVGQHAGDHKSRFGEVKHATPTTSEFTHRHRELQNAIQLNSSFPSPGSAAAVSQAHANLVQLTNRTHVVAAGYHTSEIPAAPSGPPPPVSPIVEPGGGQGDTTTPVPTTQSEQEPNPTESGPDNEGHDERDVDADSDDLDELGVDGELAADPLGAGGAGSLPGMASAVPAMLTGALGAGVGMAGQIPQKLGQQLQGLAQEATQGMTGLASGLTGAEGVDIDSEGLDGALGGFGAGSGGGGGLTEPAGAGGVGDVAPAGSAPSGDGFADGIGVAAVDWCRWRLRCRGACGCRIRGNAADVHAADGRWYGRRWRGCDPQRQRARQIH
SIO_010081: LH162_RS26510
subclass of: SO_0000673
so part of: LH162_RS26510
location: 2847..4397
location: region:2847-4397:1
so has part: feature:2847-4397:1:exon

WP_262875382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2847-4397:1:exon

LH162_RS25735
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25735
old locus tag: LH162_25735
so part of: sequence
location: 4572..4964
location: region:4572-4964:1
so has part: feature:4572-4964:1:exon
subclass of: SO_0000010

72436728
type: Gene
SIO_000068: ncbigene

position:4572:1
position: 4572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4964:1
position: 4964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4572-4964:1:exon

LH162_RS25735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25735
old locus tag: LH162_25735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552900.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbaB/EbfC family nucleoid-associated protein
translation: MTVYEYPRYQADKDLTASVVTRLERVSSMLSKVLEEIDGIDVEAIGGDGDVVLSVNAHGQLTSLSLAQGCTTRYTHGGLAELINTTLGEAVNAAAAETSAVGEGQDPAALDHAVQAFIDPDSQVWKPQSR
SIO_010081: LH162_RS25735
subclass of: SO_0000673
so part of: LH162_RS25735
location: 4572..4964
location: region:4572-4964:1
so has part: feature:4572-4964:1:exon

WP_011178554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4572-4964:1:exon

LH162_RS25740
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25740
old locus tag: LH162_25740
so part of: sequence
location: 5187..5669
location: region:5187-5669:1
so has part: feature:5187-5669:1:exon
subclass of: SO_0000010

72436729
type: Gene
SIO_000068: ncbigene

position:5187:1
position: 5187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5669:1
position: 5669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5187-5669:1:exon

LH162_RS25740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25740
old locus tag: LH162_25740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007172139.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTLAVLMALTAVVMSTIKLTAPAPTATTTTVMAPPPPPTSFSPDQLAAAKKEACHASESAATTINTAQEKYLIAARDRQSPTYGPALANFQLVAILETQYMQQHLPPATPNNVVDSTNGYITAILALADAHTRGLSEDEAQQFVVAARKAGRQLDEACV
SIO_010081: LH162_RS25740
subclass of: SO_0000673
so part of: LH162_RS25740
location: 5187..5669
location: region:5187-5669:1
so has part: feature:5187-5669:1:exon

WP_234284586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5187-5669:1:exon

LH162_RS25745
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25745
old locus tag: LH162_25745
so part of: sequence
location: 5669..6007
location: region:5669-6007:1
so has part: feature:5669-6007:1:exon
subclass of: SO_0000010

72436730
type: Gene
SIO_000068: ncbigene

position:6007:1
position: 6007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5669-6007:1:exon

LH162_RS25745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25745
old locus tag: LH162_25745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552898.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQADETLQVTPPAAESPNVLTGAATVEFAARVPEQSALATAQGAADAVHAASMWAPSVSASAGVSQQVPAAAAALAPHGGAVAQCNSQSLAEDLETDTQNAQDLTPHPAVSI
SIO_010081: LH162_RS25745
subclass of: SO_0000673
so part of: LH162_RS25745
location: 5669..6007
location: region:5669-6007:1
so has part: feature:5669-6007:1:exon

WP_011178552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5669-6007:1:exon

LH162_RS25750
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25750
old locus tag: LH162_25750
so part of: sequence
location: 6004..6588
location: region:6004-6588:1
so has part: feature:6004-6588:1:exon
subclass of: SO_0000010

72436731
type: Gene
SIO_000068: ncbigene

position:6004:1
position: 6004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6588:1
position: 6588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6004-6588:1:exon

LH162_RS25750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25750
old locus tag: LH162_25750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVVLHPPHVPEAAGPPPVSPPPQLLRGVRPGRGIVWGSAAALLAAAVALVIAAMGWVAPSGGAVSTVVVPWSPPSPSAAEVAAARTQACKLWGITASAMDDASNLVAHTPGDWNAPDMQEALANEARVIAVEGAYLRRALPDHTPAAIRSGIEDYLAASFDMENATTHRQGTSRNAAIDRANAAEDRVNAACR
SIO_010081: LH162_RS25750
subclass of: SO_0000673
so part of: LH162_RS25750
location: 6004..6588
location: region:6004-6588:1
so has part: feature:6004-6588:1:exon

WP_011178551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6004-6588:1:exon

LH162_RS25755
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25755
old locus tag: LH162_25755
so part of: sequence
location: 8031..8996
location: region:8031-8996:1
so has part: feature:8031-8996:1:exon
subclass of: SO_0000010

72436732
type: Gene
SIO_000068: ncbigene

position:8031:1
position: 8031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8996:1
position: 8996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8031-8996:1:exon

LH162_RS25755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25755
old locus tag: LH162_25755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVVPASVVSAGTTNRSRAESPELAAAKELVRRLRRDSDMVNYACIEWAVGVFRSEANGTTECVAMSNEGFGYIPWGVFLPRTARLLAADKLADDQFRQRWFGAADPAEVMDEYARLRASRGAHLVAMAVTADSPFGPPPGVEHAVCGRDLAGDGYVRPTLDDMGMHRLEATHPDLFARIQRLTGTEDQARLVENQVVLPLAMQMIDPVQTTSVQTPPELRQMWNELGTGDSIGSDAWQKYKIAATVFFVNVSANRPGPDGEVAVREQYRGQWVAARAMELLQGWERRPIATADMVYAAATAYPGDFAAKLERLLRGPEDGG
SIO_010081: LH162_RS25755
subclass of: SO_0000673
so part of: LH162_RS25755
location: 8031..8996
location: region:8031-8996:1
so has part: feature:8031-8996:1:exon

WP_240273227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031-8996:1:exon

LH162_RS25760
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25760
old locus tag: LH162_25760
so part of: sequence
location: 9089..9445
location: region:9089-9445:1
so has part: feature:9089-9445:1:exon
subclass of: SO_0000010

72436733
type: Gene
SIO_000068: ncbigene

position:9089:1
position: 9089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9445:1
position: 9445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9089-9445:1:exon

LH162_RS25760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25760
old locus tag: LH162_25760
inference: COORDINATES: protein motif:HMM:NF027613.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELIEKAPQWDLRFAVPEVCLLEAVADVPREWRKRRSEVAKLAVGEFGLTQSQNEWLDVIDRKIDGYEEALGARLADIEADIVPIPEGVNLRDIVQRAIDRRKPYQEGEGKKTAFATR
SIO_010081: LH162_RS25760
subclass of: SO_0000673
so part of: LH162_RS25760
location: 9089..9445
location: region:9089-9445:1
so has part: feature:9089-9445:1:exon

WP_012552896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9089-9445:1:exon

LH162_RS25765
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25765
old locus tag: LH162_25765
so part of: sequence
location: 9622..10431
location: region:9622-10431:1
so has part: feature:9622-10431:1:exon
subclass of: SO_0000010

72436734
type: Gene
SIO_000068: ncbigene

position:9622:1
position: 9622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10431:1
position: 10431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9622-10431:1:exon

LH162_RS25765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25765
old locus tag: LH162_25765
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYVRTLGRLVQHLAGKYDSQPESQREALISQLNQDKFEIALAASVDRFRLNPAAAALPLKAAYGVVHAFDRDVGSLEFVDVAMRGGGEWTAQFKQPIYATVDLTDRAAETSNVDKTLNVAGRLTVGANGHVRSMIVTSIEALPDDPMLRAWRMAWDPMSDTGFAQNIRQQIDPLSNPNTAKRIHESPMRPPEPDEPQKLASPSLDELAANDVASPSGEDSDPDENNGTTRDCRGKGVSGLIGPGVSGPERSHDDQDCRGCAAITKPRR
SIO_010081: LH162_RS25765
subclass of: SO_0000673
so part of: LH162_RS25765
location: 9622..10431
location: region:9622-10431:1
so has part: feature:9622-10431:1:exon

WP_240273228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9622-10431:1:exon

LH162_RS25770
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25770
old locus tag: LH162_25770
so part of: sequence
location: 10379..11713
location: region:10379-11713:1
so has part: feature:10379-11713:1:exon
subclass of: SO_0000010

72436735
type: Gene
SIO_000068: ncbigene

position:10379:1
position: 10379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11713:1
position: 11713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10379-11713:1:exon

LH162_RS25770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25770
old locus tag: LH162_25770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element IS2606 family transposase
translation: MMTKTVVAVQPSQNHEDEAGAVAAIDVPSSRDVDELEVARELVRQAREAGVGLTGPGGLLKAMTKTVIETALDEELSEHLGYDRHDRAGYGSGNSRNGTRSKTVLTDACGFIEIDVPRDRAGTFEPKIVEKRQRRLTDVDEVVLSLYARGLTTGEISAHFAHIYDAAVSKDTVSRITDRVLEEMTAWHTRPLERVYAAVFIDALHVKIRDGQVGPRPVYAAVGVDLAGHRDVLGMWAGEGDGKSAKYWLAVLTELKNRGVADIFFLVCDGLKGLPDSVSAVFPDTVVQTCIIHLIRGTLRYAGRQHHTAIARALKPIYTAVNAAAAAEALDAFDTEWGHRYPAAIRLWRTAWNEFIPFLDYDTEIRKVICSTNAIESLNARYRRAIRARGHFPTEQSALKCLYLVTRSLDPTGTGQKRWTMRWKPALNAFAITFADRMPGSETT
SIO_010081: LH162_RS25770
subclass of: SO_0000673
so part of: LH162_RS25770
location: 10379..11713
location: region:10379-11713:1
so has part: feature:10379-11713:1:exon

WP_240273229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10379-11713:1:exon

LH162_RS25775
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
gene: eccB
locus tag: LH162_RS25775
old locus tag: LH162_25775
so part of: sequence
location: 11943..13073
location: region:11943-13073:1
so has part: feature:11943-13073:1:exon
subclass of: SO_0000010

72436736
type: Gene
SIO_000068: ncbigene

position:11943:1
position: 11943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13073:1
position: 13073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11943-13073:1:exon

LH162_RS25775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
gene: eccB
locus tag: LH162_RS25775
old locus tag: LH162_25775
inference: COORDINATES: protein motif:HMM:TIGR03919.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VII secretion protein EccB
translation: MPLKLASKTQVSGHFFVRRRLAFALLRRSVSMEINPVRWHRTLLVLSAVLGVVLVVGAFVYGWFRPAGTIDASSKIVTDRSSGALFVVVGGRLHPALNLVSAQLIAGSPDRPTFVSSAQIAEWPKGPAVGIAGAPVQTPTVLSPQVSRWAVCDAAAETLRGVPVVTGIDGQLALGQGAAELGGAEALLLSYGQQVYVVANGVRMPVDVSEPALAGPLGISAGAAPTAMSEALFDALPAGDRLVVPVVSGAGGAPGVDLGPRVVVGAVVASRDVAADTDRFYVVLADGVQEISPVVASMLRQHDSFGLPTPPRVSPDRLAKVPRPIGTTAPIAGAPPARVAAVAAPPALSAAACAASAGDSTNIIGQSLTLSETHPV
SIO_010081: LH162_RS25775
subclass of: SO_0000673
so part of: LH162_RS25775
location: 11943..13073
location: region:11943-13073:1
so has part: feature:11943-13073:1:exon

WP_240273230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11943-13073:1:exon

LH162_RS25780
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25780
old locus tag: LH162_25780
so part of: sequence
location: 13235..13741
location: region:13235-13741:1
so has part: feature:13235-13741:1:exon
subclass of: SO_0000010

72436737
type: Gene
SIO_000068: ncbigene

position:13235:1
position: 13235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13741:1
position: 13741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13235-13741:1:exon

LH162_RS25780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25780
old locus tag: LH162_25780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDVELFAACGRVSQRQFDIDVIDYASTVVAGGVNGASLSGQQFYAGVGSAAVAGVDASSIAAAQLARFALFSVVNVDVGQRQWLRQSHFGDRVGQCVVGGMSGAADAALRLGEHVVALPRRSRRGYGGDHLLGLGCDPFVIDAFDLASRPGKDRASATDTVQRSHAG
SIO_010081: LH162_RS25780
subclass of: SO_0000673
so part of: LH162_RS25780
location: 13235..13741
location: region:13235-13741:1
so has part: feature:13235-13741:1:exon

WP_240273231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13235-13741:1:exon

LH162_RS25785
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25785
old locus tag: LH162_25785
so part of: sequence
location: 13798..14334
location: region:13798-14334:1
so has part: feature:13798-14334:1:exon
subclass of: SO_0000010

72436738
type: Gene
SIO_000068: ncbigene

position:13798:1
position: 13798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14334:1
position: 14334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13798-14334:1:exon

LH162_RS25785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25785
old locus tag: LH162_25785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552891.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVRSSSVGWVPTAVGIALWVDPVLHANESRRFDSFVVRGHYERDCDFFTGAIGTDGYGRFYISRGKELCVRPHRYALARSRGALRSHELALHECDNPLCVKISDASASSQHVVVGTQADNMRRMARMRRGGGRKPIAGDGLRVRRERSVALRAVLRERGWDRDAVEAALLGDMPTLW
SIO_010081: LH162_RS25785
subclass of: SO_0000673
so part of: LH162_RS25785
location: 13798..14334
location: region:13798-14334:1
so has part: feature:13798-14334:1:exon

WP_071497865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13798-14334:1:exon

LH162_RS25790
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25790
old locus tag: LH162_25790
so part of: sequence
location: 14806..15687
location: region:14806-15687:1
so has part: feature:14806-15687:1:exon
subclass of: SO_0000010

72436739
type: Gene
SIO_000068: ncbigene

position:14806:1
position: 14806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15687:1
position: 15687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14806-15687:1:exon

LH162_RS25790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25790
old locus tag: LH162_25790
inference: COORDINATES: protein motif:HMM:NF016724.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MYLRGGLRRTGDAVSSLWIHQGDVLRAYAQKHQDTADIALELPTGTGKTLPGLLIAEWVRRKAAGPVLYATPTKQLARQVLATAHAEGVPARLLVGSHLHWNVTDHSDVDGGEAIAITTYSSIFNSSPKLPLPNLIVFDDAHAGEQFVGEHYSVEIRRYEDEPAYLAVLDALRPFMSGLQIQRLQGVPDPGAHHQVRLILPAVKPGTPARLDTTLSNLGDSYKFDFAMIWYHASTKPSPFCGNPSNRRLVLLPFSWIIFIIHEKALGIDRSPGEPRPLAAWATTRRDASQARG
SIO_010081: LH162_RS25790
subclass of: SO_0000673
so part of: LH162_RS25790
location: 14806..15687
location: region:14806-15687:1
so has part: feature:14806-15687:1:exon

WP_240273232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14806-15687:1:exon

LH162_RS25795
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25795
old locus tag: LH162_25795
so part of: sequence
location: 15907..16305
location: region:15907-16305:1
so has part: feature:15907-16305:1:exon
subclass of: SO_0000010

72436740
type: Gene
SIO_000068: ncbigene

position:15907:1
position: 15907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16305:1
position: 16305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15907-16305:1:exon

LH162_RS25795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25795
old locus tag: LH162_25795
inference: COORDINATES: protein motif:HMM:NF022169.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2510 domain-containing protein
translation: MTTPPPPPGWYPDPSDPEKRIYWDGAAWSRPASAATEVDKANKSKKTAITIGVCVLVVIGLVMSMQSVSLMTGSGPVWTGVAVVAAGTAIAFFLRAARWVRVVAALILALALAKRRAPALLISRLVSWVIVD
SIO_010081: LH162_RS25795
subclass of: SO_0000673
so part of: LH162_RS25795
location: 15907..16305
location: region:15907-16305:1
so has part: feature:15907-16305:1:exon

WP_240273233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15907-16305:1:exon

LH162_RS25800
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25800
old locus tag: LH162_25800
so part of: sequence
location: complement(16271..17317)
location: region:16271-17317:-1
so has part: feature:16271-17317:-1:exon
subclass of: SO_0000010

72436741
type: Gene
SIO_000068: ncbigene

position:16271:-1
position: 16271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17317:-1
position: 17317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16271-17317:-1:exon

LH162_RS25800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25800
old locus tag: LH162_25800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011739937.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISAs1 family transposase
translation: MALLAIAVLATAAGMRGYAGFATWAATASDDVLAQLGVRFRRPSEKTFRAVLSRLDPADLNARMGSYFTAHVASSDPSGLVPIALDGKMLRGALRAKATATHLVSVFAHRARLVLGQLAVAEKSNEIPCVCALLTLLPDNLRWLVTVDAMHTQVVTAKLICATLKSHYLMIVKSNQAKILARITALPWAEVPAAATDDSRGHGRVKTRTLQIITAARGIGFPYAKQIIRITRERLITATDQRSVEVVYAICSLPFEHARPTAIMTWMRQHCGIENSLHWIRDVTFDEDRHRAHTGHGAQVLATLRNTAINLHRLNGADNIAEACRITALTANRRLDLLNPQLPSSQAC
SIO_010081: LH162_RS25800
subclass of: SO_0000673
so part of: LH162_RS25800
location: complement(16271..17317)
location: region:16271-17317:-1
so has part: feature:16271-17317:-1:exon

WP_263053961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16271-17317:-1:exon

LH162_RS25805
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25805
old locus tag: LH162_25805
pseudo: true
so part of: sequence
location: complement(<17625..>17714)
location: region:17625-17714:-1
so has part: feature:17625-17714:-1:exon
subclass of: SO_0000010

72436742
type: Gene
SIO_000068: ncbigene

position:17625:-1
position: 17625
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:17714:-1
position: 17714
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17625-17714:-1:exon

LH162_RS25805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25805
old locus tag: LH162_25805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003910224.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: LH162_RS25805
subclass of: SO_0000673
so part of: LH162_RS25805
location: complement(<17625..>17714)
location: region:17625-17714:-1
so has part: feature:17625-17714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17625-17714:-1:exon

LH162_RS25810
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25810
old locus tag: LH162_25810
so part of: sequence
location: complement(17752..19086)
location: region:17752-19086:-1
so has part: feature:17752-19086:-1:exon
subclass of: SO_0000010

72436743
type: Gene
SIO_000068: ncbigene

position:17752:-1
position: 17752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19086:-1
position: 19086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17752-19086:-1:exon

LH162_RS25810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25810
old locus tag: LH162_25810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element IS2606 family transposase
translation: MMTKTVVAVQPSQNHEDEAGAVAAIDVPSSRDVDELEVARELVRQAREAGVGLTGPGGLLKAMTKTVIETALDEELSEHLGYDRHDRAGYGSGNSRNGTRSKTVLTDGCGFIEIDVPRDRAGTFEPKIVEKRQRRLTDVDEVVLSLYARGLTTGEISAHFAHIYDAAVSKDTVSRITDRVLEEMTAWHTRPLERVYAAVFIDALHVKIRDGQVGPRPVYAAVGVDLAGHRDVLGMWAGEGDSESAKYWLAVLTELKNRGVADIFFLVCDGLKGLPDSVSAVFPDTVVQTCIIHLIRGTFRYPGRQHHTAIARALKPIYTAVNAAAAAEALDAFDTEWGHRYPAAIRLWRTAWNEFIPFLDYDTEIRKVICSTNAIESLNAHYRRAIRARGHFPTEQSALKCLYLVTRSLDPTGTGQKRWTMRWKPALNAFAITFADRMPGSETT
SIO_010081: LH162_RS25810
subclass of: SO_0000673
so part of: LH162_RS25810
location: complement(17752..19086)
location: region:17752-19086:-1
so has part: feature:17752-19086:-1:exon

WP_240273235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17752-19086:-1:exon

LH162_RS25815
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25815
old locus tag: LH162_25815
so part of: sequence
location: 19053..19442
location: region:19053-19442:1
so has part: feature:19053-19442:1:exon
subclass of: SO_0000010

72436744
type: Gene
SIO_000068: ncbigene

position:19053:1
position: 19053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19442:1
position: 19442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19053-19442:1:exon

LH162_RS25815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25815
old locus tag: LH162_25815
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MAAQPRQSWSSCDLSGPDTPGPIRPLTPLPRQSLPEIRRRFDPEFREGAVRIVRETGKPIAQVARELGVNAGTLGNWVAKDRAEREGSQGLSTDGVAELKRLRSEVAELRMERDVLKRSVVLWVKEATR
SIO_010081: LH162_RS25815
subclass of: SO_0000673
so part of: LH162_RS25815
location: 19053..19442
location: region:19053-19442:1
so has part: feature:19053-19442:1:exon

WP_011178527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19053-19442:1:exon

LH162_RS25820
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25820
old locus tag: LH162_25820
pseudo: true
so part of: sequence
location: complement(19688..20734)
location: region:19688-20734:-1
so has part: feature:19688-20734:-1:exon
subclass of: SO_0000010

72436745
type: Gene
SIO_000068: ncbigene

position:19688:-1
position: 19688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20734:-1
position: 20734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19688-20734:-1:exon

LH162_RS25820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25820
old locus tag: LH162_25820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011739937.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISAs1 family transposase
SIO_010081: LH162_RS25820
subclass of: SO_0000673
so part of: LH162_RS25820
location: complement(19688..20734)
location: region:19688-20734:-1
so has part: feature:19688-20734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19688-20734:-1:exon

LH162_RS25825
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25825
old locus tag: LH162_25825
so part of: sequence
location: 21231..22565
location: region:21231-22565:1
so has part: feature:21231-22565:1:exon
subclass of: SO_0000010

72436746
type: Gene
SIO_000068: ncbigene

position:21231:1
position: 21231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22565:1
position: 22565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21231-22565:1:exon

LH162_RS25825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25825
old locus tag: LH162_25825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element IS2606 family transposase
translation: MMTKTVVAVQPSQNHEDEAGAVAAIDVPSSRDVDELEVARELVRQAREAGVGLTGPGGLLKAMTKTVIETALDEELSEHLGYDRHDRAGYGSGNSRNGTRSKTVLTDGCGFIEIDVPRDRAGTFEPKIVEKRQRRLTDVDEVVLSLYARGLTTGEISAHFAHIYDAAVSKDTVSRITDRVLEEMTAWHTRPLERVYAAVFIDALHVKIRDGQVGPRPVYAAVGVDLAGHRDVLGMWAGEGDGESAKYWLAVLTELKNRGVADIFFLVCDGLKGLPDSVSAVFPDTVVQTCIIHLIRGTFRYPGRQHHTAIARALKPIYTAVNAAAAAEALDAFDTEWGHRYPAAIRLWRTAWNEFIPFLDYDTEIRKVICSTNAIESLNARYRRAIRARGHFPTEQSALKCLYLVTRSLDPTGTGQKRWTMRWKPALNAFAITFADRMPGSETT
SIO_010081: LH162_RS25825
subclass of: SO_0000673
so part of: LH162_RS25825
location: 21231..22565
location: region:21231-22565:1
so has part: feature:21231-22565:1:exon

WP_240273236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21231-22565:1:exon

LH162_RS25830
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25830
old locus tag: LH162_25830
pseudo: true
so part of: sequence
location: complement(22562..>23182)
location: region:22562-23182:-1
so has part: feature:22562-23182:-1:exon
subclass of: SO_0000010

72436747
type: Gene
SIO_000068: ncbigene

position:22562:-1
position: 22562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23182:-1
position: 23182
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22562-23182:-1:exon

LH162_RS25830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25830
old locus tag: LH162_25830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007323625.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LH162_RS25830
subclass of: SO_0000673
so part of: LH162_RS25830
location: complement(22562..>23182)
location: region:22562-23182:-1
so has part: feature:22562-23182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22562-23182:-1:exon

LH162_RS25835
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25835
old locus tag: LH162_25835
so part of: sequence
location: complement(23203..24504)
location: region:23203-24504:-1
so has part: feature:23203-24504:-1:exon
subclass of: SO_0000010

72436748
type: Gene
SIO_000068: ncbigene

position:23203:-1
position: 23203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24504:-1
position: 24504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23203-24504:-1:exon

LH162_RS25835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25835
old locus tag: LH162_25835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015357701.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISAs1 family transposase
translation: MIFGAALLGPECRHGLSGERSSWLLFVVGLELPVPTVSVLPVSLVPEVFDRWSAGERSELIGSEFLDVLASVPDPRDPRGRRYSLMALLAIAVLATAAGMRGYAGFATWAATASDDVLAQLGVRFRRPSEKTFRAVLSRLDPADLNARMGSYFTAHVASSDPSGLVPIALDGKMLRGALRAKATATHLVSVFAHRARLVLGQLAVAEKSNEIPCVRALLTLLPGSLRWLVTVDAMHTQVVTAKLICATLKSHYLMIVKSNQAKILARITALPWAEVPAAATDDSRGHGRVETRTLQIITAARGIGFPYAKQIIRITRERLITATDQRSVEVVYAICSLPFEHARPTAIMTWMRQHWGIENSLHWIRDVTFDEDRHRAHTGHGAQVLATLRNTAINLHRLNGADNIADACRITALTANRRLDLLNPQFPSSQAC
SIO_010081: LH162_RS25835
subclass of: SO_0000673
so part of: LH162_RS25835
location: complement(23203..24504)
location: region:23203-24504:-1
so has part: feature:23203-24504:-1:exon

WP_240273237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23203-24504:-1:exon

LH162_RS25840
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25840
old locus tag: LH162_25840
so part of: sequence
location: 24593..24880
location: region:24593-24880:1
so has part: feature:24593-24880:1:exon
subclass of: SO_0000010

72436749
type: Gene
SIO_000068: ncbigene

position:24593:1
position: 24593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24880:1
position: 24880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24593-24880:1:exon

LH162_RS25840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25840
old locus tag: LH162_25840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLACYLVWHLRKAWAPMTYTDENPPARENPVAPAQRSAAAKTKAARHQDANGATLRSFSGLLEHLATLTRNDVNFTHTTNPTPMLATPPRPTTRL
SIO_010081: LH162_RS25840
subclass of: SO_0000673
so part of: LH162_RS25840
location: 24593..24880
location: region:24593-24880:1
so has part: feature:24593-24880:1:exon

WP_240273238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24593-24880:1:exon

LH162_RS25850
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25850
old locus tag: LH162_25850
so part of: sequence
location: complement(25668..26717)
location: region:25668-26717:-1
so has part: feature:25668-26717:-1:exon
subclass of: SO_0000010

72436751
type: Gene
SIO_000068: ncbigene

position:25668:-1
position: 25668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26717:-1
position: 26717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25668-26717:-1:exon

LH162_RS25850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25850
old locus tag: LH162_25850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552886.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ketoacyl-ACP synthase III family protein
translation: MGSALDNDLQVKSNEISENQRVIWNDIYISGTGRFIPSMRPINDIQVDGVPNDHTIVQSDYISFTEADEPATVMATRAATEALTTSELVSADVGVLIYAAIIGDAHHFAPVCHVQRVLRAPDALAFELSAASNGGTQGIAVAANLMTADASVKAALVCTAYRHPIDIISRWSSGMVFGDGAAAAVLSRDGGMVRLISGYHGSLPELEVLARNRSNERLGFVLPDVGLGKYLTAIARMYQAVIAQVLEEAQTSIAEIDYFGLIGIGIPSLTATILEPNGIPVNKTSWGLLRQMGHVGACDPLLSLNHLFEQNVLKRGDKVLLLGGGVGYRLTCIVAEIAMNPGVPGHSTS
SIO_010081: LH162_RS25850
subclass of: SO_0000673
so part of: LH162_RS25850
location: complement(25668..26717)
location: region:25668-26717:-1
so has part: feature:25668-26717:-1:exon

WP_231507251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25668-26717:-1:exon

LH162_RS25855
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25855
old locus tag: LH162_25855
so part of: sequence
location: 27113..27253
location: region:27113-27253:1
so has part: feature:27113-27253:1:exon
subclass of: SO_0000010

72436752
type: Gene
SIO_000068: ncbigene

position:27113:1
position: 27113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27253:1
position: 27253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27113-27253:1:exon

LH162_RS25855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25855
old locus tag: LH162_25855
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDVDAGKELKELREQNTRLKRLPAETELVKDALREVAKDAPIDVKC
SIO_010081: LH162_RS25855
subclass of: SO_0000673
so part of: LH162_RS25855
location: 27113..27253
location: region:27113-27253:1
so has part: feature:27113-27253:1:exon

WP_011178523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27113-27253:1:exon

LH162_RS25860
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25860
old locus tag: LH162_25860
so part of: sequence
location: complement(27243..28298)
location: region:27243-28298:-1
so has part: feature:27243-28298:-1:exon
subclass of: SO_0000010

72436753
type: Gene
SIO_000068: ncbigene

position:27243:-1
position: 27243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28298:-1
position: 28298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27243-28298:-1:exon

LH162_RS25860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25860
old locus tag: LH162_25860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552881.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MGRSSRAIIGGVDTHAATHHGAVIDSRGRLLADAEYPASGRGYAAMLTWMRSKGNLTKVGVEGTGAYGAGLARYLHEQGVEVLEVPRPDRRIRRQRGKSDPIDAEAAARTVLAGRASGASKLVDGPIEAIRMLRVARSDAVKAKTAAVNALRAMLITTPDTLRSQLHGLSSAQLVAAYTKLRPDAANLTDPVQAAKAALRSIATRTRQLELESQALRTQLDGLIKSVAPATSAVFGLGPDTASALLVTIGDNPDRLRSEAAFARLCGVAPIPASSGKTHRHRLHRGGDRTGNRALHIAAVVRLRYDPRSRAYADRRTSEGLSKPEIIRCQKRYLAREVFDALRTDFTKLNT
SIO_010081: LH162_RS25860
subclass of: SO_0000673
so part of: LH162_RS25860
location: complement(27243..28298)
location: region:27243-28298:-1
so has part: feature:27243-28298:-1:exon

WP_240273239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27243-28298:-1:exon

LH162_RS25865
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25865
old locus tag: LH162_25865
so part of: sequence
location: 28567..28707
location: region:28567-28707:1
so has part: feature:28567-28707:1:exon
subclass of: SO_0000010

72436754
type: Gene
SIO_000068: ncbigene

position:28567:1
position: 28567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28707:1
position: 28707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28567-28707:1:exon

LH162_RS25865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25865
old locus tag: LH162_25865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKEVLGMSERLACKAVGRAHSTYRRTPLAATLADPDALLRQWLRT
SIO_010081: LH162_RS25865
subclass of: SO_0000673
so part of: LH162_RS25865
location: 28567..28707
location: region:28567-28707:1
so has part: feature:28567-28707:1:exon

WP_157759953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28567-28707:1:exon

LH162_RS26515
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26515
so part of: sequence
location: 28895..29428
location: region:28895-29428:1
so has part: feature:28895-29428:1:exon
subclass of: SO_0000010

75523367
type: Gene
SIO_000068: ncbigene

position:28895:1
position: 28895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29428:1
position: 29428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28895-29428:1:exon

LH162_RS26515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26515
inference: COORDINATES: protein motif:HMM:NF012870.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MDFQFDFTTDSKAVKIASMVDEHIRESLLNIVERSITAERLIAGLEWVFAAAGGPPKVLRMDNGPELISQALRQFCDRKVGLCYIQPRTPWNNATSNRSTTGYEGTASTAAAGPTHSKTAWSWTISTTNTIIGIVTPHWVTCPPRSRLPDAATLIAPWPIALWPVRSNDICVKGTRL
SIO_010081: LH162_RS26515
subclass of: SO_0000673
so part of: LH162_RS26515
location: 28895..29428
location: region:28895-29428:1
so has part: feature:28895-29428:1:exon

WP_139222213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28895-29428:1:exon

LH162_RS25880
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25880
old locus tag: LH162_25880
pseudo: true
so part of: sequence
location: <29655..>29801
location: region:29655-29801:1
so has part: feature:29655-29801:1:exon
subclass of: SO_0000010

72436757
type: Gene
SIO_000068: ncbigene

position:29655:1
position: 29655
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:29801:1
position: 29801
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29655-29801:1:exon

LH162_RS25880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25880
old locus tag: LH162_25880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011142671.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: LH162_RS25880
subclass of: SO_0000673
so part of: LH162_RS25880
location: <29655..>29801
location: region:29655-29801:1
so has part: feature:29655-29801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29655-29801:1:exon

LH162_RS25885
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25885
old locus tag: LH162_25885
so part of: sequence
location: 29990..80962
location: region:29990-80962:1
so has part: feature:29990-80962:1:exon
subclass of: SO_0000010

72436758
type: Gene
SIO_000068: ncbigene

position:29990:1
position: 29990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80962:1
position: 80962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29990-80962:1:exon

LH162_RS25885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25885
old locus tag: LH162_25885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552885.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I polyketide synthase
translation: MIFGDAHQNCRGGRVLGDAVAVVGMSCRVPGASDPDALWALLRDGISVVDEIPSARWNLDGLVAHRLTDEQRSALRHGAFLDDVEGFDAAFFGINPSEAGSMDPQQRLMLELTWAALEDARIVPEHLSGSSSGVFTGAMSDDYTTAVTYRAAMTAHTFAGTHRSLIANRVSYTLGLRGPSLVIDTGQSSSLVAVHVAMESLRREETSLAIAGGIHLNLSLAAALSAAHFGALSPDGRCYTFDARANGYVRGEGGGVVVLKRLNDALADGNHIYCVIRGSSVNNDGATQDLTAPGVDGQRQALLQAYERAEIDPSEVQYVELHGTGTRLGDPTEAHSLHSVFGTSTVPRSPLLVGSIKTNIGHLEGAAGILGLIKTALAVHHRQLPPSLNYTVPNPKIPLEQLGLRVQTTLSEWPDLDKPLTAGVSSFSMGGTNAHLILQQPPTPDTTQTPNPTTGSDPAVGSDPAVGVLVWPLSARSAPGLSAQAARLYQHLSAHPDLDPIDVAHSLATTRSHHPHRATITTSIEHHSENNHDTTDALAALHALANNGTHPLLSRGLLTPQGPGKTVFVFPGQGSQYPGMGADLYRQFPVFAHALDEVAAALNPHLDVALLEVMFSQQDTAMAQLLDQTFYAQPALFALGTALHRLFTHAGIHPDYLLGHSIGELTAAYAAGVLSLQDAATLVTSRGRLMQSCTPGGTMLALQASEAEVQPLLEGLDHAVSIAAINGATSIVLSGDHDSLEQIGEHFITQDRRTTRLQVSHAFHSPHMDPILEQFRQIAAQLTFSAPTLPILSNLTGQIARHDQLASPDYWTQQLRNTVRFHDTVAALLGAGEQVFLELSPHPVLTQAITDTVEQAGGGGAAVPALRKDRPDAVAFAAALGQLHCHGISPSWNVLYCQARPLTLPTYAFQHQRYWLLPTAGDFSGANTHAMHPLLDTATELAENRGWVFTGRISPRTQPWLNEHAVESAVLFPNTGFVELALHVADRAGYSSVNELIVHTPLLLAGHDTADLQITVTDTDDMGRQSLNIHSRPHIGHDNTTTGDEQPEWVLHASAVLTAQTTDHNHLPLTPVPWPPPGTAAIEVDDFYDDLAAQGYNYGPTFQGVQRIWRDHATPDVIYAEVELPEDTDIDGYGIHPALFDAALHPLLALTQPPTNDTDDTNTADTGDQVRLPYAFTGISLHATHATRLRVRLTRTGADAITVHTSDTTGAPVAIIDSLITRPLTTATGSAPATTAAGLLHLSWPPHPDTTTDTDTDTDALRYQVIAEPTQQLPRYLHDLHTSTDLHTSTTEADVVVWPVPVPSNEELQAHQASDTAVSSRIHTLTRQTLTVVQDWLTHPDTTGTRLVIVTRHGVSTSAHDPVPDLAHAAVWGLIRSAQNEHPGRFTLLDTDDNTNSDTLTTALTLPTRENQLAIRRDTIHIPRLTRHSSDGALTAPVVVDPEGTVLITGGTGTLGALFAEHLVSAHGVRHLLLTSRRGPQAHGATDLQQRLTDLGAHVTITACDISDPEALAALVNSVPTQHRLTAVVHTAAVLADTPVTELTGDQLDQVLAPKIDAAWQLHQLTYEHNLSAFIMFSSMAGMIGSPGLGNYAAANTALDALADYRHRLGLPATSLAWGYWQTHTGLTAHLTDVDLARMTRLGLMPIATSHGLALFDAALATGQPVSIPAPINTHTLARHARDNTLAPILSALITTPRRRAASAATDLAARLNGLSPQQQQQTLATLVAAATATVLGHHTPESISPATAFKDLGIDSLTALELRNTLTHNTGLNLSSTLIFDHPTPHAVAEHLLEQIPGIGALVPAPVVIAAGRTEEPVAVVGMACRFPGGVASADQLWDLVIAGRDVVANFPADRGWDVEGLFDPDPDAVGKTYTRYGAFLDDAAGFDAGFFGISPREARAMDPQQRLLLEVCWEALETAGIPAHTLAGTSTGVFVGAWAQSYGATNSDDAEGYAMTGGATSVMSGRIAYTLGLEGPAITVDTACSSSLVAIHLACQSL…
SIO_010081: LH162_RS25885
subclass of: SO_0000673
so part of: LH162_RS25885
location: 29990..80962
location: region:29990-80962:1
so has part: feature:29990-80962:1:exon

WP_240273240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29990-80962:1:exon

LH162_RS25890
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
gene: mlsA2
locus tag: LH162_RS25890
old locus tag: LH162_25890
so part of: sequence
location: 80949..88181
location: region:80949-88181:1
so has part: feature:80949-88181:1:exon
subclass of: SO_0000010

72436759
type: Gene
SIO_000068: ncbigene

position:80949:1
position: 80949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88181:1
position: 88181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80949-88181:1:exon

LH162_RS25890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
gene: mlsA2
locus tag: LH162_RS25890
old locus tag: LH162_25890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011178520.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mycolactone polyketide synthase MLSA2
translation: MVSTEENLRVYLKQVITDLHQMQARLRKIEKQRSERVAVVGMACRFPGGVASADQLWDLVIAGRDVVANFPADRGWDVEGLFDPDPDAVGKTYTRYGAFLDDAAGFDAGFFGVSPREARAMDPQQRLLLEVCWEALETAGIPAHTLAGTSTGVFVGAWAQSYGATNSDGAEGYAMTGGSTSVMSGRIAYTLGLEGPAITVDTACSSSLVAIHLACQSLRNNESQLALAGGVTVMSTPAVFTEFSRQRGLAPDGRCKAFAATADGTGWGEGAAVLVLERLSEARRNNHPVLAIVAGSAINQDGASNGLTAPHGPSQQRVINQALANAGLTHDQVDAVEAHGTGTTLGDPIEAGALHATYGHHHTPDQPLWLGSIKSNIGHTQAAAGAAGVVKMIQAITHATLPATLHVDQPSPHIDWSSGTVRLLTEPIQWPNTDHPRTAAVSSFGISGTNAHLILQQPPTPNTTQTPNPTTGSDPAVGSDSAVGSDPAVGVLVWPLSARSAPGLSAQAARLYQHLSAHPDLDPIDVAHSLATTRSHHPHRATITTSIEHHSENNHDTTDALAALHALANNGTHPLLSRGLLTPQGPGKTVFVFPGQGSQYPGMGADLYRQFPVFAHALDEVAAALNPHLDVALLEVMFSQQDTAMAQLLDQTFYAQPALFALGTALHRLFTHAGIHPDYLLGHSIGELTAAYAAGVLSLQDAATLVTSRGRLMQSCTPGGTMLALQASEAEVQPLLEGLDHAVSIAAINGATSIVLSGDHDSLEQIGEHFITQDRRTTRLQVSHAFHSPHMDPILEQFRQIAAQLTFSAPTLPILSNLTGQIARHDQLASPDYWTQQLRNTVRFHDTVAALLGAGEQVFLELSPHPVLTQAITDTVEQAGGGGAAVPALRKDRPDAVAFAAALGQLHCHGISPSWNVLYCQARPLTLPTYAFQHQRYWLLPTAGDFSGANTHAMHPLLDTATELAENRGWVFTGRISPRTQPWLNEHAVESAVLFPGTGFVELALHVADRAGYSSVNELIVHTPLLLAGHDTADLQITVTDTDDMGRQSLNIHSRPHIGHDNTTTGDEQPEWVLHASAVLTAQTTDHNHLPLTPVPWPPPGTAAIEVDDFYDDLAAQGYNYGPTFQGVQRIWRDHATPDVIYAEVELPEDTDIDGYGIHPALFDAALHPLLALTQPPTNDTDDTNTADTGDQVRLPYAFTGISLHATHATRLRVRLTRTGADAITVHTSDTTGAPVAIIDSLITRPLTTATGSAPATTAAGLLHLSWPPHPDTTTDTDTDTDALRYQVIAEPTQQLPRYLHDLHTSTDLHTSTTEADVVVWPVPVPSNEELQAHQASDTAVSSRIHTLTRQTLTVVQDWLTHPDTTGTRLVIVTRHGVSTSAHDPVPDLAHAAVWGLIRSAQNEHPGRFTLLDTDDNTNSDTLTTALTLPTRENQLAIRRDTIHIPRLTRTAVLTPPDSGPWRLDTTGKGDLANLALLPTAHTALASGQIRIDVRAAGLNFHDVVVALGLIPDDGFGGEAAGVISEIGPDVYGFAVGDAVTGMTVSGAFAPSTVADHRMVMTIPARWSFPQAASIPVVFLTAYIALAEISGLSRGQRVLIHAGTGGVGMAAIQLAHHLGAEVFATASAAKWSTLEALGVPRDHIASSRTLDFSNAFLDATNGAGVDVVLNCLSGEFVEASLALLPRGGHFVEIGKTDIRDTEVIAATHPGVIYRALDLLSVSPDHIQRTLAQLSPLFATDTLKPLPTTNYSIYQAISALRDMSQARHTGKIVLTAPVVVDPEGTVLITGGTGTLGALFAEHLVSAHGVRHLLLTSRRGPQAHGATDLQQRLTDLGAHVTITACDISDPEALAALVNSVPTQHRLTAVVHTAAVLADTPVTELTGDQLDQVLAPKIDAAWQLHQLTYEHNLSAFIMFSSMAGMIGSPGQGNYAAANTALDALADYRHRLGLPATSLAWSYWQTHTGLTAHLTDVDLARMTRLGLMPIATSHGLALFDAALA…
SIO_010081: LH162_RS25890
subclass of: SO_0000673
so part of: LH162_RS25890
location: 80949..88181
location: region:80949-88181:1
so has part: feature:80949-88181:1:exon

WP_240273211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80949-88181:1:exon

LH162_RS25895
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25895
old locus tag: LH162_25895
so part of: sequence
location: 88337..89242
location: region:88337-89242:1
so has part: feature:88337-89242:1:exon
subclass of: SO_0000010

72436760
type: Gene
SIO_000068: ncbigene

position:88337:1
position: 88337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89242:1
position: 89242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88337-89242:1:exon

LH162_RS25895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25895
old locus tag: LH162_25895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011178519.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mycolactone biosynthesis thioesterase
translation: MIVWPEVVSTVVDVDGVAMSALVAEPDQEPKAVILALHGGATNARYFDCPGHRALSLLHTGAAAGFTVVALDRPGYGSSAGDPDAMNRPHQRAALAYGALDRILAQRPRGAGVFIMGHSNGCELAMWMATETRGAELLGIELAGTGWHYQPEAREILTTATGEHRWVGLYDLLWHPQRLYPPEVLNAAIISSSAPAYEEQMMADWTRRTFLELVPAVRVPVHFSIAQHEKVWQRDSSALDEIAVLFSGAPRFILHEQPEAGHNISLGHTAGDYHTTVLSFVQQCLAERLANAQQDVDLAAE
SIO_010081: LH162_RS25895
subclass of: SO_0000673
so part of: LH162_RS25895
location: 88337..89242
location: region:88337-89242:1
so has part: feature:88337-89242:1:exon

WP_011178519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88337-89242:1:exon

LH162_RS25900
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25900
old locus tag: LH162_25900
so part of: sequence
location: complement(89350..90699)
location: region:89350-90699:-1
so has part: feature:89350-90699:-1:exon
subclass of: SO_0000010

72436761
type: Gene
SIO_000068: ncbigene

position:89350:-1
position: 89350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90699:-1
position: 90699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89350-90699:-1:exon

LH162_RS25900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25900
old locus tag: LH162_25900
inference: COORDINATES: protein motif:HMM:NF013752.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTNASTGEIYEAMDWLLARQDAIEKQLAAKYLAASVNPSRMALFDLSSSWMTGQCCDLAARGYSRDGKKGLPQIEYGLLTDPAGRPVAIRVFAGNTADPAAFTDIVEVVRERFGLDRLVLVGDRGMITSARIAALRELNNDPDTATGFGWITALRAPAIAKLAGDDGPLQLSLFDTQDLATITHPDYPSERLIACRNPLLATQRARKRAELLTVTEAALAPIIAAVACGRLAGAGRIGVKVGKVLAKFKMAKHFHLDITDTTLTVTRDQTKIDAEAALDGIYVLRTSVTANELDPAAVVVSYKNLANVERDFRSIKTDDLDLRPIHHRLDDRVKAHILIAMLACYLVWHLRKAWAPMTYTDENPPARENPVTPAEGTTSPGSTPRKRDTTLFANSKPWATTSPSTERPDRSPSKRTSRQSSRQVNKFTDASSAKRNVSTPAVGAQSGNL
SIO_010081: LH162_RS25900
subclass of: SO_0000673
so part of: LH162_RS25900
location: complement(89350..90699)
location: region:89350-90699:-1
so has part: feature:89350-90699:-1:exon

WP_240273212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89350-90699:-1:exon

LH162_RS25905
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25905
old locus tag: LH162_25905
so part of: sequence
location: 91022..92356
location: region:91022-92356:1
so has part: feature:91022-92356:1:exon
subclass of: SO_0000010

72436762
type: Gene
SIO_000068: ncbigene

position:91022:1
position: 91022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92356:1
position: 92356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91022-92356:1:exon

LH162_RS25905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25905
old locus tag: LH162_25905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element IS2606 family transposase
translation: MMTKTVVAVQPSQNHEDEAGAVAAIDVPSSRDVDELEVARELVRQAREAGVGLTGPGGLLKAMTKTVIEIALDEELSEHLGYDRHDRAGYGSGNSRNGTRSKTVLTDGCGFIEIDVPRDRAGTFEPKIVEKRQRRLTDVDEVVLSLYARGLTTGEISAHFAHIYDAAVSKDTVSRITDRVLEEMTAWHTRPLERVYAAVFIDALHVKIRDGQVGPRPVYAAVGVDLAGHRDVLGMWAGEGDGESAKYWLAVLTELKNRGVADIFFLVCDGLKGLPDSVSAVFPDTVVQTCIIHLIRGTFRYPGRQHHTAIARALKPIYTAVNAAAAAEALDAFDTEWGHRYPAAIRLWRTAWNEFIPFLDYDTEIRKVICSTNAIESLNARYRRAIRARGHFPTEQSALKCLYLVTRSLDPTGTGQKRWTMRWKPALNAFAITFADRMPGSETT
SIO_010081: LH162_RS25905
subclass of: SO_0000673
so part of: LH162_RS25905
location: 91022..92356
location: region:91022-92356:1
so has part: feature:91022-92356:1:exon

WP_240273213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91022-92356:1:exon

LH162_RS25910
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25910
old locus tag: LH162_25910
so part of: sequence
location: complement(92410..93090)
location: region:92410-93090:-1
so has part: feature:92410-93090:-1:exon
subclass of: SO_0000010

72436763
type: Gene
SIO_000068: ncbigene

position:92410:-1
position: 92410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93090:-1
position: 93090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92410-93090:-1:exon

LH162_RS25910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25910
old locus tag: LH162_25910
inference: COORDINATES: protein motif:HMM:NF013698.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MDTHAATHHGAVIDSRGRLLADAEYPASGRGYAAMLTWMRSKGNLTKVGVEGTGAYGAGLARYLHEQGVEVLEVPRPDRRIRRQRGKSDPIDAEAAARTVLAGRASGASKLVDGPIEAIRMLRVARSDAVKAKTAAVNALRAMLITTHQDANGATLRSFSGLLEHLATLTRNDVNFTHTTNPIPMLATPPPTNNAPLTSSEPPSPSPAPRSHQRQPTKPQNPQVNS
SIO_010081: LH162_RS25910
subclass of: SO_0000673
so part of: LH162_RS25910
location: complement(92410..93090)
location: region:92410-93090:-1
so has part: feature:92410-93090:-1:exon

WP_240366582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92410-93090:-1:exon

LH162_RS25915
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25915
old locus tag: LH162_25915
so part of: sequence
location: 93391..93531
location: region:93391-93531:1
so has part: feature:93391-93531:1:exon
subclass of: SO_0000010

72436764
type: Gene
SIO_000068: ncbigene

position:93391:1
position: 93391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93531:1
position: 93531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93391-93531:1:exon

LH162_RS25915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25915
old locus tag: LH162_25915
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKEVLGMSERLACKAVGRAHSTYRRTPLAATLADPDALLRQWLRT
SIO_010081: LH162_RS25915
subclass of: SO_0000673
so part of: LH162_RS25915
location: 93391..93531
location: region:93391-93531:1
so has part: feature:93391-93531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93391-93531:1:exon

LH162_RS26520
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26520
so part of: sequence
location: 93719..94252
location: region:93719-94252:1
so has part: feature:93719-94252:1:exon
subclass of: SO_0000010

75523368
type: Gene
SIO_000068: ncbigene

position:93719:1
position: 93719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94252:1
position: 94252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93719-94252:1:exon

LH162_RS26520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26520
inference: COORDINATES: protein motif:HMM:NF012870.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MDFQFDFTTDSKAVKIASMVDEHIRESLLNIVERSITAERLIAGLEWVFAAAGGPPKVLRMDNGPELISQALRQFCDRKVGLCYIQPRTPWNNATSNRSTTGYEGTASTAAAGPTHSKTAWSWTISTTNTIIGIVTPHWVTCPPRSRLPDAATLIAPWPIALWPVRSNDICVKGTRL
SIO_010081: LH162_RS26520
subclass of: SO_0000673
so part of: LH162_RS26520
location: 93719..94252
location: region:93719-94252:1
so has part: feature:93719-94252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93719-94252:1:exon

LH162_RS25930
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25930
old locus tag: LH162_25930
pseudo: true
so part of: sequence
location: <94479..>94625
location: region:94479-94625:1
so has part: feature:94479-94625:1:exon
subclass of: SO_0000010

72436767
type: Gene
SIO_000068: ncbigene

position:94479:1
position: 94479
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:94625:1
position: 94625
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94479-94625:1:exon

LH162_RS25930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25930
old locus tag: LH162_25930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011142671.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: LH162_RS25930
subclass of: SO_0000673
so part of: LH162_RS25930
location: <94479..>94625
location: region:94479-94625:1
so has part: feature:94479-94625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94479-94625:1:exon

LH162_RS25935
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25935
old locus tag: LH162_25935
so part of: sequence
location: 94856..137314
location: region:94856-137314:1
so has part: feature:94856-137314:1:exon
subclass of: SO_0000010

72436768
type: Gene
SIO_000068: ncbigene

position:94856:1
position: 94856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137314:1
position: 137314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94856-137314:1:exon

LH162_RS25935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25935
old locus tag: LH162_25935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552879.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I polyketide synthase
translation: MLGDAVAVVGMSCRVPGASDPDALWALLRDGISVVDEIPSARWNLDGLVAHRLTDEQRSALRHGAFLDDVEGFDAAFFGINPSEAGSMDPQQRLMLELTWAALEDARIVPEHLSGSSSGVFTGAMSDDYTTAVTYRAAMTAHTFAGTHRSLIANRVSYTLGLRGPSLVIDTGQSSSLVAVHVAMESLRREETSLAIAGGIHLNLSLAAALSAAHFGALSPDGRCYTFDARANGYVRGEGGGVVVLKRLNDALADGNHIYCVIRGSSVNNDGATQDLTAPGVDGQRQALLQAYERAEIDPSEVQYVELHGTGTRLGDPTEAHSLHSVFGTSTVPRSPLLVGSIKTNIGHLEGAAGILGLIKTALAVHHRQLPPSLNYTVPNPKIPLEQLGLRVQTTLSEWPDLDKPLTAGVSSFSMGGTNAHLILQQPPTPDTTQTPNPTTGSDPAVGSDPAVGVLVWPLSARSAPGLSAQAARLYQHLSAHPDLDPIDVAHSLATTRSHHPHRATITTSIEHHSENNHDTTDALAALHALANNGTHPLLSRGLLTPQGPGKTVFVFPGQGSQYPGMGADLYRQFPVFAHALDEVAAALNPHLDVALLEVMFSQQDTAMAQLLDQTFYAQPALFALGTALHRLFTHAGIHPDYLPGHSIGELTAAYAAGVLSLQDAATLVTSRGRLMQSCTPGGTMLALQASEAEVQPLLEGLDHAVSIAAINGATSIVLSGDHDSLEQIGEHFITQDRRTTRLQVSHAFHSPHMDPILEQFRQIAAQLTFSAPTLPILSNLTGQIARHDQLASPDYWTQQLRNTVRFHDTVAALLGAGEQVFLELSPHPVLTQAITDTVEQAGGGGAAVPALRKDRPDAVAFAAALGQLHCHGISPSWNVLYCQACPLTLPTYAFQHQRYWLLPTAGDFSGANTHAMHPLLDTATELAENRGWVFTGRISPRTQPWLNEHAVESAVLFPGTGFVELALHVADRAGYSSVNELIVHTPLLLAGHDTADLQITVTDTDDMGRQSLNIHSHPHIGHDNTTTGDEQPEWVLHASAVLTAQTTDHNHLPLTPVPWPPPGTAAIEVDDFYDDLAAQGYNYGPTFQGVQRIWRDHATPDVIYAEVELPEDTDIDGYGIHPALFDAALHPLLALTQPPTNDTDDTNTADTGDQVRLPYAFTGISLHATHATRLRVRLTRTGADAITVHTSDTTGAPVAIIDSLITRPLTTATGSAPATTAAGLLHLSWPPHPDTTTDTDTDTDALRYQVIAEPTQQLPRYLHDLHTSTDLHTSTTEADVVVWPVPVPSNEELQAHQASDTAVSSRIHTLTRQTLTVVQDWLTHPDTTGTRLVIVTRHGVSTSAHDPVPDLAHAAVWGLIRSAQNEHPGRFTLLDTDDNTNSDTLTTALTLPTRENQLAIRRDTIHIPRLTRHSSDGALTAPVVVDPEGTVLITGGTGTLGALFAEHLVSAHGVRHLLLTSRRGPQAHGATDLQQRLTDLGAHVTITACDISDPEALAALVNSVPTQHRLTAVVQTAAVLADTPVTELTGDQLDQVLAPKIDAAWQLHQLTYEHNLSAFIMFSSMAGMIGSPGLGNYAAANTALDALADYRHRLGLPATSLAWGYWQTHTGLTAHLTDVDLARMTRLGLMPIATSHGLALFDAALATGQPVSIPAPINTHTLARHARDNTLAPILSALITTPRRRAASAATDLAARLNGLSPQQQQQTLATLVAAATATVLGHHTPESISPATAFKDLGIDSLTALELRNTLTHNTGLNLSSTLIFDHPTPHAVAEHLLEQIPGIGALVPAPVVIAAGRTEEPVAVVGMACRFPGGVASADQLWDLVIAGRDVVGNFPADRGWDVEGLFDPDPDAVGKTYTRYGAFLDDAAGFDAGFFGISPREARAMDPQQRLLLEVCWEALETAGIPAHTLAGTSTGVFVGAWAQSYGATNSDDAEGYAMTGGATSVMSGRIAYTLGLEGPAITVDTACSSSLVAIHLACQSLRNNESQLALAGGVT…
SIO_010081: LH162_RS25935
subclass of: SO_0000673
so part of: LH162_RS25935
location: 94856..137314
location: region:94856-137314:1
so has part: feature:94856-137314:1:exon

WP_240273214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94856-137314:1:exon

LH162_RS25940
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25940
old locus tag: LH162_25940
so part of: sequence
location: 137371..137700
location: region:137371-137700:1
so has part: feature:137371-137700:1:exon
subclass of: SO_0000010

72436769
type: Gene
SIO_000068: ncbigene

position:137371:1
position: 137371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137700:1
position: 137700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137371-137700:1:exon

LH162_RS25940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25940
old locus tag: LH162_25940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSNGSNGAAARRRQSSIAVEDVPDPQVPERAQRRTFTAKYKLAILEEYERAERAQRGALLRRENLYSSLRDCRGKGVSGLIGPGVSGPERSHDDQDCRGCAAITKPRR
SIO_010081: LH162_RS25940
subclass of: SO_0000673
so part of: LH162_RS25940
location: 137371..137700
location: region:137371-137700:1
so has part: feature:137371-137700:1:exon

WP_240273215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137371-137700:1:exon

LH162_RS25945
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25945
old locus tag: LH162_25945
so part of: sequence
location: 137648..138982
location: region:137648-138982:1
so has part: feature:137648-138982:1:exon
subclass of: SO_0000010

72436770
type: Gene
SIO_000068: ncbigene

position:137648:1
position: 137648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138982:1
position: 138982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137648-138982:1:exon

LH162_RS25945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25945
old locus tag: LH162_25945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element IS2606 family transposase
translation: MMTKTVVAVQPSQNHEDEAGAVAAIDVPSSRDVDELEVARELVRQAREAGVGLTGPGGLLKAMTKTVIETALDEELSEHLGYDRHDRAGYGSGNSRNGTRSKTVLTDACGSIEIDVPRDRAGTFEPKIVEKRQRRLTDVDEVVLSLYARGLTTGEISAHFAHIYDAAVSKDTVSRITDRVLEEMTAWHTRPLERVYAAVFIDALHVKIRDGQVGPRPVYAAVGVDLAGHRDVLGMWAGEGDGESAKYWLAVLTELKNRGVADIFFLVCDGLKGLPDSVSAVFPDTVVQTCIIHLIRGTFRYAGRQHHTAIARALKPIYTAVNAAAAAEALDAFDTEWGHRYPAAIRLWRNAWNEFIPFLDYDTEIRKVICSTNAIESLNARYRRAIRARGHFPTEQSALKCLYLVTRSLDPTGTGQKRWTMRWKPALNAFAITFADRMPGSETT
SIO_010081: LH162_RS25945
subclass of: SO_0000673
so part of: LH162_RS25945
location: 137648..138982
location: region:137648-138982:1
so has part: feature:137648-138982:1:exon

WP_011738515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137648-138982:1:exon

LH162_RS25950
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25950
old locus tag: LH162_25950
pseudo: true
so part of: sequence
location: 139290..140591
location: region:139290-140591:1
so has part: feature:139290-140591:1:exon
subclass of: SO_0000010

72436771
type: Gene
SIO_000068: ncbigene

position:139290:1
position: 139290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140591:1
position: 140591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139290-140591:1:exon

LH162_RS25950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25950
old locus tag: LH162_25950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015357701.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISAs1 family transposase
SIO_010081: LH162_RS25950
subclass of: SO_0000673
so part of: LH162_RS25950
location: 139290..140591
location: region:139290-140591:1
so has part: feature:139290-140591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139290-140591:1:exon

LH162_RS25955
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25955
old locus tag: LH162_25955
so part of: sequence
location: 140635..142374
location: region:140635-142374:1
so has part: feature:140635-142374:1:exon
subclass of: SO_0000010

72436772
type: Gene
SIO_000068: ncbigene

position:140635:1
position: 140635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142374:1
position: 142374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140635-142374:1:exon

LH162_RS25955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25955
old locus tag: LH162_25955
inference: COORDINATES: protein motif:HMM:NF033559.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1634 family transposase
translation: MAKPMAMHVARTPSAHVDKAGNARRYEAVLVRRSYRDGKKVRHQTLANLSKLPAHVIDVVEASLKGQALVAPESVCEITRSLPHGHVAAVGAMARTLGLPALLGPRCRSRDLVLGLIISRVLRPASKLATLAWWADTTLGEDLNVTNASTGEIYEAMDWLLARQDAIEKQLAAKYLAASVNPSRMALFDLSSSWMTGQCCDLAARGYSRDGKKGLPQIEYGLLTDPAGRPVAIRVFAGNTADPAAFTDIVEVVRERFGLDRLVLVGDRGMITSARIAALRELNNDPDTATGFGWITALRAPAIAKLAGDDGPLQLSLFDTQDLATITHPDYPSERLIACRNPLLATQRARKRAELLTVTEAALAPIIAAVACGRLAGAGRIGVKVGKVLAKFKMAKHFHLDITDTTLTVTRDQTKIDAEAALDGIYVLRTSVTANELDPAAVVVSYKNLANVERDFRSIKTDDLDLRPIHHRLDDRVKAHILIAMLACYLVWHLRKAWAPMTYTDENPPARENPVAPAQRSAAAKTKAARHQDANGATLRSFSGLLEHLATLTRNDVNFTHTTNPIPMLATPPRPTTRL
SIO_010081: LH162_RS25955
subclass of: SO_0000673
so part of: LH162_RS25955
location: 140635..142374
location: region:140635-142374:1
so has part: feature:140635-142374:1:exon

WP_240273216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140635-142374:1:exon

LH162_RS25960
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25960
old locus tag: LH162_25960
so part of: sequence
location: 142591..143409
location: region:142591-143409:1
so has part: feature:142591-143409:1:exon
subclass of: SO_0000010

72436773
type: Gene
SIO_000068: ncbigene

position:142591:1
position: 142591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143409:1
position: 143409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142591-143409:1:exon

LH162_RS25960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25960
old locus tag: LH162_25960
inference: COORDINATES: protein motif:HMM:NF033542.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MTRERTREIQRLEKLLEDAGIKLSSVAADLNGKSSRAMLEALLAGETDTAVMADLAEKQLRRKIPQLTEALYGRFTAHHAFLARMHLNLIDQHTAAIEALTERIEVVMQPFRGFRDLICTIPGIGGFTADVVVAETGADMTKFPTAQHLASWAGTTPGNNESAGKVKSRRTRPGNPYLQGALGTAAMSISHTRDTYLAAKYRRVAARRGPLRANVAVQRALLVAIWNIATTNTGYHDPGGDYFTRLNPQKARHNAVRQLEAMGYHVTLDRAS
SIO_010081: LH162_RS25960
subclass of: SO_0000673
so part of: LH162_RS25960
location: 142591..143409
location: region:142591-143409:1
so has part: feature:142591-143409:1:exon

WP_015057068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142591-143409:1:exon

LH162_RS25965
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25965
old locus tag: LH162_25965
pseudo: true
so part of: sequence
location: complement(143591..144926)
location: region:143591-144926:-1
so has part: feature:143591-144926:-1:exon
subclass of: SO_0000010

72436774
type: Gene
SIO_000068: ncbigene

position:143591:-1
position: 143591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144926:-1
position: 144926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143591-144926:-1:exon

LH162_RS25965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25965
old locus tag: LH162_25965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558065.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256-like element IS2606 family transposase
SIO_010081: LH162_RS25965
subclass of: SO_0000673
so part of: LH162_RS25965
location: complement(143591..144926)
location: region:143591-144926:-1
so has part: feature:143591-144926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143591-144926:-1:exon

LH162_RS25970
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25970
old locus tag: LH162_25970
so part of: sequence
location: complement(145098..146837)
location: region:145098-146837:-1
so has part: feature:145098-146837:-1:exon
subclass of: SO_0000010

72436775
type: Gene
SIO_000068: ncbigene

position:145098:-1
position: 145098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146837:-1
position: 146837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145098-146837:-1:exon

LH162_RS25970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25970
old locus tag: LH162_25970
inference: COORDINATES: protein motif:HMM:NF033559.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1634 family transposase
translation: MAKPMAMHVARTPSAHVDKAGNARRYEAVLVRRSYRDGKKVRHQTLANLSKLPAHVIDVVEASLKGQALVAPESVCEITRSLPHGHVAAVGAMARTLGLPALLGPRCRSRDLVLGLIISRVLRPASKLATLAWWADTTLGEDLNVTNASTGEIYEAMDWLLARQDAIEKQLAAKYLAASVNPSRMALFDLSSSWMTGQCCDLAARGYSRDGKKGLPQIEYGLLTDPAGRPVAIRVFAGNTADPAAFTDIVEVVRERFGLDRLVLVGDRGMITSARIAALRELNNDPDTATGFGWITALRAPAIAKLAGDDGPLQLSLFDTQDLATITHPDYPSERLIACRNPLLATQRARKRAELLTVTEAALAPIIAAVACGRLAGAGRIGVKVGKVLAKFKMAKHFHLDITDTTLTVTRDQTKIDAEAALDGIYVLRTSVTANELDPAAVVVSYKNLANVERDFRSIKTDDLDLRPIHHRLDDRVKAHILIAMLACYLVWHLRKAWAPMTYTDENPPARENPVAPAQRSAAAKTKAARHQDANGATLRSFSGLLEHLATLTRNDVNFTHTTNPIPMLATPPRPTTRL
SIO_010081: LH162_RS25970
subclass of: SO_0000673
so part of: LH162_RS25970
location: complement(145098..146837)
location: region:145098-146837:-1
so has part: feature:145098-146837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145098-146837:-1:exon

LH162_RS25975
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25975
old locus tag: LH162_25975
so part of: sequence
location: 147567..148154
location: region:147567-148154:1
so has part: feature:147567-148154:1:exon
subclass of: SO_0000010

72436776
type: Gene
SIO_000068: ncbigene

position:147567:1
position: 147567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148154:1
position: 148154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147567-148154:1:exon

LH162_RS25975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25975
old locus tag: LH162_25975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552873.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MGGSTAPALGALLARHQIDLTVEEVLDELDSGFAAIPGAATLSTTEVDFLRANAGPGTTAVIDAWSASNERPARARIALQQLTGALSGSVSIKEAATMLGVDRSRVSRRITAKALWAFDLQGNRRIPRWQFLSNELLPGLDVIVPAIARGTTPAVLDVFMHTPQPDFDDRTPIEHLAAGGDPALVAGFIADLARW
SIO_010081: LH162_RS25975
subclass of: SO_0000673
so part of: LH162_RS25975
location: 147567..148154
location: region:147567-148154:1
so has part: feature:147567-148154:1:exon

WP_240273217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147567-148154:1:exon

LH162_RS25980
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25980
old locus tag: LH162_25980
so part of: sequence
location: 148151..148783
location: region:148151-148783:1
so has part: feature:148151-148783:1:exon
subclass of: SO_0000010

72436777
type: Gene
SIO_000068: ncbigene

position:148151:1
position: 148151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148783:1
position: 148783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148151-148783:1:exon

LH162_RS25980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25980
old locus tag: LH162_25980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007171764.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RES family NAD+ phosphorylase
translation: MSPRPKPKAPRTPPEQLIREPDDNIDYSGTLWRVHRTEGEHILPWNTLRTFGPLPSMRWDPHPGPQPSSHADGVLYAAADVATSLAEVYQTTRVIDTRANAPTLTAWQPQRRLRLLDLSGTWLLRNTASAALLAAPRSICRRWARAIYTTWPELDGLYVPSTMTGRPNIVLWNAAADSIPTMPSFTRPLTHPLVWSIGQAAAAEIGYRIQ
SIO_010081: LH162_RS25980
subclass of: SO_0000673
so part of: LH162_RS25980
location: 148151..148783
location: region:148151-148783:1
so has part: feature:148151-148783:1:exon

WP_011178505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148151-148783:1:exon

LH162_RS25985
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25985
old locus tag: LH162_25985
so part of: sequence
location: 148899..149090
location: region:148899-149090:1
so has part: feature:148899-149090:1:exon
subclass of: SO_0000010

72436778
type: Gene
SIO_000068: ncbigene

position:148899:1
position: 148899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149090:1
position: 149090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148899-149090:1:exon

LH162_RS25985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25985
old locus tag: LH162_25985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGTDAAVIATRSSISSEDSQTYHVMFYALRSVVLECATNLTGDQVDMVRRLADQTLHRLHTL
SIO_010081: LH162_RS25985
subclass of: SO_0000673
so part of: LH162_RS25985
location: 148899..149090
location: region:148899-149090:1
so has part: feature:148899-149090:1:exon

WP_240273218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148899-149090:1:exon

LH162_RS25990
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25990
old locus tag: LH162_25990
so part of: sequence
location: 149087..149863
location: region:149087-149863:1
so has part: feature:149087-149863:1:exon
subclass of: SO_0000010

72436779
type: Gene
SIO_000068: ncbigene

position:149087:1
position: 149087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149863:1
position: 149863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149087-149863:1:exon

LH162_RS25990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25990
old locus tag: LH162_25990
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDNRSGRAQLVTAMLAVLVMIAITLTAYAVGARWPAHPRQHRLAPGLAALSGERLAELLPVQTDLPPGWTRYDDPYRRTPAAGFGYHRYHSNGVDWGYQPAECIDVRYGNGHVTPSPAAEFAQYAPGHPTEVHQVADLQIQISREFNPALFTDMLAQVSRCRRFIARQPFGTARFTVRVLEDSHPLHGPHRFRYAVTVTYSDDDLLPSETRYVYYARTSRLVVAASDSSGNPQLLDTVFDKALHQICTRATESRQRC
SIO_010081: LH162_RS25990
subclass of: SO_0000673
so part of: LH162_RS25990
location: 149087..149863
location: region:149087-149863:1
so has part: feature:149087-149863:1:exon

WP_011178497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149087-149863:1:exon

LH162_RS25995
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS25995
old locus tag: LH162_25995
so part of: sequence
location: 149857..150630
location: region:149857-150630:1
so has part: feature:149857-150630:1:exon
subclass of: SO_0000010

72436780
type: Gene
SIO_000068: ncbigene

position:149857:1
position: 149857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150630:1
position: 150630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149857-150630:1:exon

LH162_RS25995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS25995
old locus tag: LH162_25995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552861.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLISGLWARLVVAPWWVRVLANGLALAGIAVVFTIGFVAHFVSQTNWAWATAAAGATGVGYGALITSVRGPIHLRFAATVAGLTVQQRGQALTALRRGDVPSDPRVVAAASRLGALMLAYGRRTHPLQWAFLGAFAAVAVVLRITHSQPGFFCLLLVYLAATPTLIWQRRLLKRLPDRLARLHAAASPAIWAAQEQPDHSTMAQQRLLSSALTGFVAGAFAVAALVGTQYVSQPQAAAGDAQGAALLLAPVTATVGR
SIO_010081: LH162_RS25995
subclass of: SO_0000673
so part of: LH162_RS25995
location: 149857..150630
location: region:149857-150630:1
so has part: feature:149857-150630:1:exon

WP_156091852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149857-150630:1:exon

LH162_RS26000
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26000
old locus tag: LH162_26000
so part of: sequence
location: 150869..151351
location: region:150869-151351:1
so has part: feature:150869-151351:1:exon
subclass of: SO_0000010

72436781
type: Gene
SIO_000068: ncbigene

position:150869:1
position: 150869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151351:1
position: 151351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150869-151351:1:exon

LH162_RS26000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26000
old locus tag: LH162_26000
inference: COORDINATES: protein motif:HMM:TIGR03544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DivIVA domain-containing protein
translation: MLPTVAVGSLFWFIAPLPNWHLGLLGAAMLLAAWIVWELRGLSRDNCRAIRAALRGRPNTPWGSRDEDLEFHSVSHSELLDPALPKSPFGKQGYRYDDVDVFLGLIADELQGSDLSESDIHSITFRCAAPLTRGYDTESVDRFLDRIAETIARGHGDEGQ
SIO_010081: LH162_RS26000
subclass of: SO_0000673
so part of: LH162_RS26000
location: 150869..151351
location: region:150869-151351:1
so has part: feature:150869-151351:1:exon

WP_240273219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150869-151351:1:exon

LH162_RS26005
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26005
old locus tag: LH162_26005
so part of: sequence
location: complement(151368..152051)
location: region:151368-152051:-1
so has part: feature:151368-152051:-1:exon
subclass of: SO_0000010

72436782
type: Gene
SIO_000068: ncbigene

position:151368:-1
position: 151368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152051:-1
position: 152051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151368-152051:-1:exon

LH162_RS26005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26005
old locus tag: LH162_26005
inference: COORDINATES: protein motif:HMM:NF013648.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MVKSSPAMLPTADPATLAETRPDLIIDTGSLDKATYNQLAAIAPTLTRPADTTQEWNWQNQLTWIATALGRTTTATTLLNNAVAEQTQIKSDNPAFSGKTITVVNLSDTTTTVATKVSPPTAYLEGLGFAYNVYFKRGPNDPPEVEVDEDSFDWGRAKMTDVMIVIRTDRAAGGGGFGGLPSKFALFNEPLVIVDDLATITALNSGGPAATTYLDTTLVNKLAHQIH
SIO_010081: LH162_RS26005
subclass of: SO_0000673
so part of: LH162_RS26005
location: complement(151368..152051)
location: region:151368-152051:-1
so has part: feature:151368-152051:-1:exon

WP_240273220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151368-152051:-1:exon

LH162_RS26010
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26010
old locus tag: LH162_26010
pseudo: true
so part of: sequence
location: complement(<152656..153303)
location: region:152656-153303:-1
so has part: feature:152656-153303:-1:exon
subclass of: SO_0000010

72436783
type: Gene
SIO_000068: ncbigene

position:152656:-1
position: 152656
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:153303:-1
position: 153303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152656-153303:-1:exon

LH162_RS26010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26010
old locus tag: LH162_26010
inference: COORDINATES: protein motif:HMM:NF012298.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: serine/threonine-protein kinase
SIO_010081: LH162_RS26010
subclass of: SO_0000673
so part of: LH162_RS26010
location: complement(<152656..153303)
location: region:152656-153303:-1
so has part: feature:152656-153303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152656-153303:-1:exon

LH162_RS26015
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26015
old locus tag: LH162_26015
so part of: sequence
location: complement(153378..154169)
location: region:153378-154169:-1
so has part: feature:153378-154169:-1:exon
subclass of: SO_0000010

72436784
type: Gene
SIO_000068: ncbigene

position:153378:-1
position: 153378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154169:-1
position: 154169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153378-154169:-1:exon

LH162_RS26015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26015
old locus tag: LH162_26015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLELPNADEAVETVRAMADNSAALTFPFSAEPFPTEPFSIPRHPDTSAVTFHHDVPAPEPVGGERFSVVAFTAHGPFVLAQWADAAESADKSAQLIATTLELQEPRIDTFTPTPPDRISDLPLDPSGLLSRVLPPEEENKTVDDGVYDHLGIVHFGGDPVRRQAMFKSAGLQQAAYTVTADVYEAGDAESAQRIVAELAAEAIDDGLVAATGVQGMPKARCLEGDLAYWCVAAADRYAYTVQGHEGAVHQMVAAQYRILTGK
SIO_010081: LH162_RS26015
subclass of: SO_0000673
so part of: LH162_RS26015
location: complement(153378..154169)
location: region:153378-154169:-1
so has part: feature:153378-154169:-1:exon

WP_240273221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153378-154169:-1:exon

LH162_RS26020
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26020
old locus tag: LH162_26020
so part of: sequence
location: complement(154183..154539)
location: region:154183-154539:-1
so has part: feature:154183-154539:-1:exon
subclass of: SO_0000010

72436785
type: Gene
SIO_000068: ncbigene

position:154183:-1
position: 154183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154539:-1
position: 154539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154183-154539:-1:exon

LH162_RS26020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26020
old locus tag: LH162_26020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIRSTILYISSGVHGSSRMAQLRTAQRPLTTAQQAPPLGVAGDAVKGGWAEARRIATAVVGPWETDPTLVHYAQFDSGVVKGPGAVDFRLGSPIGDALKGHNVIAGFSSAQDRHQPL
SIO_010081: LH162_RS26020
subclass of: SO_0000673
so part of: LH162_RS26020
location: complement(154183..154539)
location: region:154183-154539:-1
so has part: feature:154183-154539:-1:exon

WP_071497927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154183-154539:-1:exon

LH162_RS26025
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26025
old locus tag: LH162_26025
so part of: sequence
location: 154675..155187
location: region:154675-155187:1
so has part: feature:154675-155187:1:exon
subclass of: SO_0000010

72436786
type: Gene
SIO_000068: ncbigene

position:154675:1
position: 154675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155187:1
position: 155187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154675-155187:1:exon

LH162_RS26025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26025
old locus tag: LH162_26025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552850.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleic acid-binding protein
translation: MPQGDSAVRQLAHSAIISPNPIPAALSARVPELAQQLVDIVAIARIPGVRAKVAVRSRVAGINPVSVCIGWGGLRIADVEKGLGGERIHVVAYHVDPATYVINVLGCPGTGTGAAAAAEERSRRIRVRVEAHDYPRTVGKAGQNVRLASKLTGQKIEILVEKSCTADCFA
SIO_010081: LH162_RS26025
subclass of: SO_0000673
so part of: LH162_RS26025
location: 154675..155187
location: region:154675-155187:1
so has part: feature:154675-155187:1:exon

WP_240273222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154675-155187:1:exon

LH162_RS26030
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26030
old locus tag: LH162_26030
so part of: sequence
location: 155572..156159
location: region:155572-156159:1
so has part: feature:155572-156159:1:exon
subclass of: SO_0000010

72436787
type: Gene
SIO_000068: ncbigene

position:155572:1
position: 155572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156159:1
position: 156159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155572-156159:1:exon

LH162_RS26030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26030
old locus tag: LH162_26030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIDPEILKAVQTVYSTDLGLPEEWTPAQRMEFLTAEADKISSMAASMAETLWEQAITAWTRSRNGQTPNHATKVALLGDARAQAVTRVLNSELYELIETEETDETDMSPPQSGQPIPHRNQVDWQQRWTNPIYQSDPTPDLKALIDRLWPASDFSAPRRWWPPCARSLTSLRPPVVRRWEWEELAGDDRPHGKAK
SIO_010081: LH162_RS26030
subclass of: SO_0000673
so part of: LH162_RS26030
location: 155572..156159
location: region:155572-156159:1
so has part: feature:155572-156159:1:exon

WP_240273223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155572-156159:1:exon

LH162_RS26035
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26035
old locus tag: LH162_26035
so part of: sequence
location: 157898..158878
location: region:157898-158878:1
so has part: feature:157898-158878:1:exon
subclass of: SO_0000010

72436788
type: Gene
SIO_000068: ncbigene

position:157898:1
position: 157898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158878:1
position: 158878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157898-158878:1:exon

LH162_RS26035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26035
old locus tag: LH162_26035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552844.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MSRSVAVWDDAGLVEPAVNWSKLGNVYLFANGKGGVGKSTCSTHSAALVASDGARALLVDLNGQGNVANMLGFANTEADDKGRNLYSAITAGAALTPIPDVRPGLDVVPGGPFVRRIAPVMAAEMGNPQTAKQVLMSLALALAQISDHYGVIFIDSPPENQLLLQAALCASRFVVVPMKTDDLSRTGLRELAGDLRAMREHNPSVVLLGCFVFASGTSSTRIREEMKKNVAADLGQNDDVMLDSFIRHSEAVGRDVPKFGRLAHELEQEIVNNPSRSAIRQGRADATTVVSTTSVSVAEDFAKLTGEILTRGSKIRQDLINEGVWP
SIO_010081: LH162_RS26035
subclass of: SO_0000673
so part of: LH162_RS26035
location: 157898..158878
location: region:157898-158878:1
so has part: feature:157898-158878:1:exon

WP_011178487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157898-158878:1:exon

LH162_RS26040
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26040
old locus tag: LH162_26040
so part of: sequence
location: 158869..159489
location: region:158869-159489:1
so has part: feature:158869-159489:1:exon
subclass of: SO_0000010

72436789
type: Gene
SIO_000068: ncbigene

position:158869:1
position: 158869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159489:1
position: 159489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158869-159489:1:exon

LH162_RS26040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26040
old locus tag: LH162_26040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552843.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVSKLTPQELPEADLADLTKPKSRGAGLADLVNAAQPRPASAPEQAAVEVPVEDRPVAATPSKTSDVSAAKVPARKPGRPRTRSKPTTAVYVSPGVKSRFEKYRHNVKSTNLHVVLEAISIKYQAGELAEIIEKSRYSTAPTHDLFPADPSAVRYLGGGSAQIAFSLTAEQEEVIDTIGSKLGFDTRSTWIAPVLNAFLPGRKDA
SIO_010081: LH162_RS26040
subclass of: SO_0000673
so part of: LH162_RS26040
location: 158869..159489
location: region:158869-159489:1
so has part: feature:158869-159489:1:exon

WP_240273224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158869-159489:1:exon

LH162_RS26045
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26045
old locus tag: LH162_26045
so part of: sequence
location: complement(159509..160045)
location: region:159509-160045:-1
so has part: feature:159509-160045:-1:exon
subclass of: SO_0000010

72436790
type: Gene
SIO_000068: ncbigene

position:159509:-1
position: 159509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160045:-1
position: 160045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159509-160045:-1:exon

LH162_RS26045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26045
old locus tag: LH162_26045
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSPSEPSAYTLADAGKQLGVTAQRVSQMLSSGELTGPQYPQQRVPKNAVRVWKWSLDQELARRRSTPPPRHSRRQQPDPGADQEYLAQWWSRREARVNAAAHELKVAADLARQHASDERRKARQLMSKLARLTIQQAELIERLKDDLAVESERTEQIIDAYSDALTQLLAPDFGPPP
SIO_010081: LH162_RS26045
subclass of: SO_0000673
so part of: LH162_RS26045
location: complement(159509..160045)
location: region:159509-160045:-1
so has part: feature:159509-160045:-1:exon

WP_151197703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159509-160045:-1:exon

LH162_RS26050
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26050
old locus tag: LH162_26050
so part of: sequence
location: 160368..160682
location: region:160368-160682:1
so has part: feature:160368-160682:1:exon
subclass of: SO_0000010

72436791
type: Gene
SIO_000068: ncbigene

position:160368:1
position: 160368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160682:1
position: 160682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160368-160682:1:exon

LH162_RS26050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26050
old locus tag: LH162_26050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014805336.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNAPEFKRQCATAGSAEQEALRRKRRQGSENRNMAGRLQVRFDTTKLRELEAAAGTKLPALIRQCGDLLTELVPVAEQQGIDPVELIRRTAASLLDRTELLSA
SIO_010081: LH162_RS26050
subclass of: SO_0000673
so part of: LH162_RS26050
location: 160368..160682
location: region:160368-160682:1
so has part: feature:160368-160682:1:exon

WP_011178484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160368-160682:1:exon

LH162_RS26055
type: Gene
subclass of: SO_0000704
RO_0002162: 1809
locus tag: LH162_RS26055
old locus tag: LH162_26055
so part of: sequence
location: complement(160692..161783)
location: region:160692-161783:-1
so has part: feature:160692-161783:-1:exon
subclass of: SO_0000010

72436792
type: Gene
SIO_000068: ncbigene

position:160692:-1
position: 160692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161783:-1
position: 161783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160692-161783:-1:exon

LH162_RS26055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1809
locus tag: LH162_RS26055
old locus tag: LH162_26055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007172374.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MFVGLELDTNSYTGVPCWSAGPAHWAHNTVAVAYDLRYQQIRSLMCDGGIARKTLIVIAAAMARHADWSTGRNCRPTNNQLEAATGFHQRTIQRAHECLRLLGVATEVLRGRQRTYIERMASWRMGDRHRGWASVWALHDNGEVARVVHSLSPHLERSSVTTHTSPKTSLFTTHPGATRARESGATRRNSPDARGRRLAAQWRADPHAPPWTRRYSPTSWSAMLAAPAAAGWTARDLTALVQDWLGTGHRIPSTPARPIALLGTLLAWHTSHNSIQHRPAALEEAREAADLAAVRKRIQKQTAEHHANLAAREAGRAALGGPGHQAARIAAAAAARNAARRRTKMVAAEVASVDAAIRRARGR
SIO_010081: LH162_RS26055
subclass of: SO_0000673
so part of: LH162_RS26055
location: complement(160692..161783)
location: region:160692-161783:-1
so has part: feature:160692-161783:-1:exon

WP_157912158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160692-161783:-1:exon