Candidatus Promineofilum breve strain Cfx-K chromosome II, complete sequence.
Bacteria; Chloroflexota; Ardenticatenia; Ardenticatenia incertae sedis; Candidatus Promineifilum.
Submitted (19-JAN-2016) Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University, Centre for Microbial Communities, Fredrik Bajers Vej 7H, Aalborg East DK-9220, Denmark
REFSEQ INFORMATION: The reference sequence is identical to\nLN890656.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/26/2023 20:01:16\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,375\nCDSs (total) :: 4,319\nGenes (coding) :: 4,283\nCDSs (with protein) :: 4,283\nGenes (RNA) :: 56\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 4\nPseudo Genes (total) :: 36\nCDSs (without protein) :: 36\nPseudo Genes (ambiguous residues) :: 0 of 36\nPseudo Genes (frameshifted) :: 3 of 36\nPseudo Genes (incomplete) :: 34 of 36\nPseudo Genes (internal stop) :: 1 of 36\nPseudo Genes (multiple problems) :: 2 of 36\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_016874190.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: protein motif:HMM:NF019311.2
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007418835.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_009856984.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
Tex-like N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010457953.1
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558608.1
COORDINATES: similar to AA sequence:RefSeq:WP_006561730.1
PstS family phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003389801.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_012191523.1
COORDINATES: similar to AA sequence:RefSeq:WP_012119146.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_009629045.1
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007652635.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313109.1
COORDINATES: protein motif:HMM:NF022113.2
LpqB family beta-propeller domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014100492.1
COORDINATES: similar to AA sequence:RefSeq:WP_012474311.1
COORDINATES: similar to AA sequence:RefSeq:WP_012474310.1
COORDINATES: similar to AA sequence:RefSeq:WP_004075692.1
COORDINATES: similar to AA sequence:RefSeq:WP_013646384.1
COORDINATES: protein motif:HMM:NF017496.2
COORDINATES: similar to AA sequence:RefSeq:WP_017717507.1
type ISP restriction/modification enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_019871497.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558578.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_007097640.1
COORDINATES: protein motif:HMM:NF013915.2
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_013158828.1
COORDINATES: similar to AA sequence:RefSeq:WP_020335491.1
COORDINATES: protein motif:HMM:NF013232.2
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
COORDINATES: protein motif:HMM:TIGR00225.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005988157.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006509533.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006793 - phosphorus metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011400295.1
COORDINATES: similar to AA sequence:RefSeq:WP_007416541.1
COORDINATES: protein motif:HMM:NF019334.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012122675.1
COORDINATES: protein motif:HMM:NF024808.2
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014763.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024180.2
COORDINATES: protein motif:HMM:NF015722.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: protein motif:HMM:NF012471.2
COORDINATES: similar to AA sequence:RefSeq:WP_007413620.1
COORDINATES: protein motif:HMM:NF041518.1
choice-of-anchor Q domain-containing protein
COORDINATES: protein motif:HMM:NF012422.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF012364.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
DNA polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020250079.1
COORDINATES: similar to AA sequence:RefSeq:WP_015127488.1
COORDINATES: similar to AA sequence:RefSeq:WP_020606860.1
fibronectin type III domain-containing protein
COORDINATES: protein motif:HMM:NF012956.2
COORDINATES: protein motif:HMM:NF024589.2
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: protein motif:HMM:NF013124.2
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: protein motif:HMM:NF012698.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006563718.1
COORDINATES: protein motif:HMM:TIGR03663.1
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:NF019265.2
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF021570.2
COORDINATES: protein motif:HMM:TIGR03662.1
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006669107.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: similar to AA sequence:RefSeq:WP_015253265.1
COORDINATES: protein motif:HMM:NF025636.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF013247.2
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00336.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011565470.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021873.2
COORDINATES: similar to AA sequence:RefSeq:WP_012174333.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015253767.1
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013962693.1
COORDINATES: similar to AA sequence:RefSeq:WP_008991723.1
MvaI/BcnI family restriction endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_013929503.1
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559691.1
energy-coupling factor ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_011954965.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006143867.1
COORDINATES: protein motif:HMM:NF024883.2
GAF domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_019585362.1
COORDINATES: similar to AA sequence:RefSeq:WP_012407375.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560669.1
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706553.1
COORDINATES: protein motif:HMM:NF014433.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
TRC40/GET3/ArsA family transport-energizing ATPase
COORDINATES: protein motif:HMM:NF018637.2
arsenite efflux transporter metallochaperone ArsD
COORDINATES: similar to AA sequence:RefSeq:WP_014435321.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_013560662.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560663.1
COORDINATES: protein motif:HMM:NF037202.2
COORDINATES: similar to AA sequence:RefSeq:WP_016949824.1
type II toxin-antitoxin system HicA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_015201823.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: protein motif:HMM:NF014342.2
COORDINATES: similar to AA sequence:RefSeq:WP_014431388.1
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_015784920.1
COORDINATES: similar to AA sequence:RefSeq:WP_013614347.1
COORDINATES: similar to AA sequence:RefSeq:WP_012256721.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012705.2
squalene/phytoene synthase family protein
COORDINATES: protein motif:HMM:TIGR02734.1
GO:0016166 - phytoene dehydrogenase activity [Evidence IEA]
GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014642870.1
COORDINATES: similar to AA sequence:RefSeq:WP_005909772.1
COORDINATES: similar to AA sequence:RefSeq:WP_012258487.1
COORDINATES: similar to AA sequence:RefSeq:WP_002708698.1
COORDINATES: similar to AA sequence:RefSeq:WP_010510789.1
COORDINATES: similar to AA sequence:RefSeq:WP_013060714.1
hydantoinase/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF039803.1
COORDINATES: similar to AA sequence:RefSeq:WP_012631851.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010888255.1
GO:0000310 - xanthine phosphoribosyltransferase activity [Evidence IEA]
GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004071806.1
COORDINATES: similar to AA sequence:RefSeq:WP_012256861.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008527365.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013488.2
COORDINATES: similar to AA sequence:RefSeq:WP_013914889.1
Type 1 glutamine amidotransferase-like domain-containing protein
COORDINATES: protein motif:HMM:NF013970.2
type II toxin-antitoxin system VapC family toxin
COORDINATES: protein motif:HMM:TIGR01439.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014433289.1
COORDINATES: protein motif:HMM:NF039608.1
COORDINATES: protein motif:HMM:NF014081.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014434131.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009498.0
COORDINATES: protein motif:HMM:NF013473.2
major facilitator superfamily domain-containing protein 6
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: protein motif:HMM:NF040088.1
COORDINATES: protein motif:HMM:NF025869.2
COORDINATES: protein motif:HMM:NF027879.2
MIT C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF028007.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF025053.2
COORDINATES: protein motif:HMM:NF012708.2
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: protein motif:HMM:NF039835.1
pre-peptidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006562641.1
aspartate:alanine exchanger family transporter
COORDINATES: protein motif:HMM:NF033545.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024626.2
COORDINATES: similar to AA sequence:RefSeq:WP_017297979.1
type II toxin-antitoxin system MqsA family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_020881338.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014397282.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF022337.2
COORDINATES: protein motif:HMM:NF012296.2
COORDINATES: similar to AA sequence:RefSeq:WP_015769931.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: protein motif:HMM:TIGR02384.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: protein motif:HMM:NF040120.1
COORDINATES: similar to AA sequence:RefSeq:WP_019308169.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877064.1
COORDINATES: protein motif:HMM:TIGR00594.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012407308.1
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:TIGR00400.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_020521618.1
COORDINATES: similar to AA sequence:RefSeq:WP_015125342.1
COORDINATES: similar to AA sequence:RefSeq:WP_012122245.1
COORDINATES: protein motif:HMM:NF015047.2
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014643.2
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: protein motif:HMM:TIGR03805.1
parallel beta-helix domain-containing protein
COORDINATES: protein motif:HMM:NF012936.2
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015235003.1
COORDINATES: protein motif:HMM:NF022441.2
COORDINATES: similar to AA sequence:RefSeq:WP_015189667.1
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF014059.2
COORDINATES: protein motif:HMM:NF012862.2
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF019323.2
COORDINATES: similar to AA sequence:RefSeq:WP_012257793.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012544846.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969425.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018206431.1
class I SAM-dependent DNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012873583.1
COORDINATES: similar to AA sequence:RefSeq:WP_011331645.1
GO:0005507 - copper ion binding [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015098007.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182354.1
COORDINATES: protein motif:HMM:NF039977.1
COORDINATES: similar to AA sequence:RefSeq:WP_015184725.1
COORDINATES: similar to AA sequence:RefSeq:WP_012875504.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006212031.1
COORDINATES: similar to AA sequence:RefSeq:WP_014433468.1
COORDINATES: protein motif:HMM:NF013954.2
GO:0004040 - amidase activity [Evidence IEA]
glucosaminidase domain-containing protein
COORDINATES: protein motif:HMM:NF012356.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025711.2
COORDINATES: similar to AA sequence:RefSeq:WP_012258966.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF039822.1
COORDINATES: similar to AA sequence:RefSeq:WP_018467578.1
COORDINATES: protein motif:HMM:NF012437.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: protein motif:HMM:NF013434.2
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017318037.1
COORDINATES: similar to AA sequence:RefSeq:WP_013938234.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002788334.1
COORDINATES: similar to AA sequence:RefSeq:WP_015137942.1
COORDINATES: similar to AA sequence:RefSeq:WP_011956323.1
ligase-associated DNA damage response exonuclease
COORDINATES: protein motif:HMM:NF023178.2
COORDINATES: protein motif:HMM:NF015644.2
COORDINATES: protein motif:HMM:NF023418.2
transglutaminase domain-containing protein
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF014910.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF020950.2
COORDINATES: similar to AA sequence:RefSeq:WP_011957854.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_015153264.1
GO:0050532 - 2-phosphosulfolactate phosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024273.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_012006055.1
COORDINATES: protein motif:HMM:NF018613.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020581258.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018756024.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015352443.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007025768.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF016107.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012873588.1
COORDINATES: similar to AA sequence:RefSeq:WP_013012909.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011957776.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012120242.1
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018462109.1
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF024758.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006488414.1
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015724687.1
COORDINATES: protein motif:HMM:NF024919.2
COORDINATES: similar to AA sequence:RefSeq:WP_012259184.1
COORDINATES: similar to AA sequence:RefSeq:WP_018206059.1
COORDINATES: protein motif:HMM:NF015317.2
COORDINATES: similar to AA sequence:RefSeq:WP_012843062.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_014435148.1
COORDINATES: similar to AA sequence:RefSeq:WP_012615336.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007952460.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF037100.2
COORDINATES: protein motif:HMM:TIGR00711.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_006107384.1
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: protein motif:HMM:NF021604.2
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF025585.2
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF015763.2
COORDINATES: similar to AA sequence:RefSeq:WP_011956512.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: similar to AA sequence:RefSeq:WP_007718868.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_007920883.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_012122330.1
GO:0016866 - intramolecular transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002761671.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_002733868.1
COORDINATES: similar to AA sequence:RefSeq:WP_012258367.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04534.1
COORDINATES: similar to AA sequence:RefSeq:WP_012188447.1
COORDINATES: similar to AA sequence:RefSeq:WP_002777515.1
COORDINATES: similar to AA sequence:RefSeq:WP_019493970.1
COORDINATES: protein motif:HMM:NF013694.2
magnesium transporter CorA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014423927.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: similar to AA sequence:RefSeq:WP_015206207.1
GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF027495.2
BtrH N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005410250.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016329318.1
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: similar to AA sequence:RefSeq:WP_002625119.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_007379310.1
COORDINATES: similar to AA sequence:RefSeq:WP_012844855.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012257837.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012191530.1
CpsD/CapB family tyrosine-protein kinase
COORDINATES: protein motif:HMM:NF014732.2
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
Wzz/FepE/Etk N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559241.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_012122672.1
COORDINATES: similar to AA sequence:RefSeq:WP_020382939.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559818.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF039502.1
COORDINATES: similar to AA sequence:RefSeq:WP_006517843.1
COORDINATES: protein motif:HMM:NF040143.1
COORDINATES: similar to AA sequence:RefSeq:WP_008314898.1
COORDINATES: protein motif:HMM:NF015649.2
BTAD domain-containing putative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020674865.1
DnaJ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020611070.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012301.2
HAMP domain-containing sensor histidine kinase
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_010222435.1
COORDINATES: protein motif:HMM:NF012584.2
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF002677.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033679.1
COORDINATES: protein motif:HMM:NF015185.2
COORDINATES: protein motif:HMM:NF021599.2
COORDINATES: similar to AA sequence:RefSeq:WP_014734184.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061669.1
COORDINATES: similar to AA sequence:RefSeq:WP_010941317.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
branched-chain amino acid aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017873613.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018590.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: similar to AA sequence:RefSeq:WP_018408357.1
COORDINATES: similar to AA sequence:RefSeq:WP_017718779.1
COORDINATES: protein motif:HMM:NF027787.2
COORDINATES: protein motif:HMM:NF017015.2
COORDINATES: similar to AA sequence:RefSeq:WP_018466324.1
COORDINATES: similar to AA sequence:RefSeq:WP_015166645.1
COORDINATES: similar to AA sequence:RefSeq:WP_015166643.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011144139.1
UBP-type zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: protein motif:HMM:NF025015.2
COORDINATES: similar to AA sequence:RefSeq:WP_018002246.1
COORDINATES: similar to AA sequence:RefSeq:WP_008184185.1
COORDINATES: similar to AA sequence:RefSeq:WP_012662675.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014432013.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015184221.1
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014435028.1
COORDINATES: protein motif:HMM:NF028237.2
histidine kinase N-terminal 7TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012876468.1
COORDINATES: similar to AA sequence:RefSeq:WP_018196776.1
COORDINATES: similar to AA sequence:RefSeq:WP_008481992.1
COORDINATES: similar to AA sequence:RefSeq:WP_012642219.1
COORDINATES: protein motif:HMM:NF013003.2
COORDINATES: similar to AA sequence:RefSeq:WP_017301827.1
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_009850373.1
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558988.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016876366.1
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_012191723.1
COORDINATES: similar to AA sequence:RefSeq:WP_017238114.1
COORDINATES: protein motif:HMM:NF015669.2
COORDINATES: similar to AA sequence:RefSeq:WP_013033072.1
COORDINATES: similar to AA sequence:RefSeq:WP_015218514.1
form I ribulose bisphosphate carboxylase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019507966.1
COORDINATES: similar to AA sequence:RefSeq:WP_009059561.1
COORDINATES: similar to AA sequence:RefSeq:WP_011684546.1
COORDINATES: protein motif:HMM:NF016071.2
COORDINATES: similar to AA sequence:RefSeq:WP_012160814.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012474665.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424432.1
PmeII family type II restriction endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_012693830.1
COORDINATES: similar to AA sequence:RefSeq:WP_015940326.1
COORDINATES: protein motif:HMM:NF012703.2
COORDINATES: protein motif:HMM:NF028259.2
COORDINATES: similar to AA sequence:RefSeq:WP_019392312.1
COORDINATES: similar to AA sequence:RefSeq:WP_011957144.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012618.2
COORDINATES: similar to AA sequence:RefSeq:WP_011434851.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_012188442.1
COORDINATES: similar to AA sequence:RefSeq:WP_003941300.1
COORDINATES: protein motif:HMM:NF024515.2
COORDINATES: similar to AA sequence:RefSeq:WP_015922053.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560310.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_012235781.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011318699.1
COORDINATES: protein motif:HMM:NF013782.2
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014247098.1
COORDINATES: protein motif:HMM:NF021443.2
COORDINATES: protein motif:HMM:NF017415.2
COORDINATES: protein motif:HMM:NF016206.2
COORDINATES: similar to AA sequence:RefSeq:WP_012871137.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014312659.1
COORDINATES: similar to AA sequence:RefSeq:WP_009672875.1
COORDINATES: protein motif:HMM:NF021158.2
COORDINATES: similar to AA sequence:RefSeq:WP_016872479.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013014089.1
COORDINATES: similar to AA sequence:RefSeq:WP_013179134.1
COORDINATES: similar to AA sequence:RefSeq:WP_020263656.1
COORDINATES: protein motif:HMM:TIGR00296.1
COORDINATES: similar to AA sequence:RefSeq:WP_009135115.1
COORDINATES: protein motif:HMM:NF012235.2
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013250839.1
COORDINATES: protein motif:HMM:NF021371.2
COORDINATES: similar to AA sequence:RefSeq:WP_015881020.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024834.2
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560025.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_006562578.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009231197.1
COORDINATES: similar to AA sequence:RefSeq:WP_013934311.1
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
Dam family site-specific DNA-(adenine-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015347275.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009021912.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008296127.1
COORDINATES: protein motif:HMM:NF013460.2
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: protein motif:HMM:TIGR04315.1
GO:0020037 - heme binding [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]
tetrathionate reductase family octaheme c-type cytochrome
COORDINATES: protein motif:HMM:NF033788.1
COORDINATES: similar to AA sequence:RefSeq:WP_007064439.1
COORDINATES: protein motif:HMM:NF022766.2
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015186995.1
GO:0008801 - beta-phosphoglucomutase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015588.2
COORDINATES: similar to AA sequence:RefSeq:WP_015795306.1
COORDINATES: similar to AA sequence:RefSeq:WP_015157006.1
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_009738272.1
COORDINATES: similar to AA sequence:RefSeq:WP_006932776.1
COORDINATES: protein motif:HMM:TIGR00229.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012188659.1
COORDINATES: similar to AA sequence:RefSeq:WP_007916199.1
COORDINATES: protein motif:HMM:NF021363.2
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006520054.1
COORDINATES: protein motif:HMM:NF024488.2
COORDINATES: protein motif:HMM:NF022022.2
phage antirepressor N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013485751.1
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF025330.2
COORDINATES: similar to AA sequence:RefSeq:WP_010413976.1
COORDINATES: protein motif:HMM:NF017984.2
GO:0019104 - DNA N-glycosylase activity [Evidence IEA]
GO:0036297 - interstrand cross-link repair [Evidence IEA]
crosslink repair DNA glycosylase YcaQ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007912747.1
COORDINATES: similar to AA sequence:RefSeq:WP_013842944.1
COORDINATES: protein motif:HMM:TIGR00305.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_007923113.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_017535369.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_020384346.1
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF021886.2
COORDINATES: similar to AA sequence:RefSeq:WP_012412223.1
COORDINATES: similar to AA sequence:RefSeq:WP_011955707.1
COORDINATES: protein motif:HMM:NF025078.2
COORDINATES: protein motif:HMM:NF012234.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021220.2
COORDINATES: protein motif:HMM:TIGR02243.1
COORDINATES: similar to AA sequence:RefSeq:WP_010314547.1
COORDINATES: similar to AA sequence:RefSeq:WP_004627543.1
COORDINATES: protein motif:HMM:NF016595.2
COORDINATES: protein motif:HMM:NF017739.2
contractile injection system protein, VgrG/Pvc8 family
COORDINATES: similar to AA sequence:RefSeq:WP_010314538.1
COORDINATES: protein motif:HMM:TIGR02241.1
COORDINATES: protein motif:HMM:NF016845.2
phage tail sheath C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010314529.1
COORDINATES: similar to AA sequence:RefSeq:WP_010914132.1
COORDINATES: protein motif:HMM:NF025431.2
COORDINATES: similar to AA sequence:RefSeq:WP_006836111.1
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: protein motif:HMM:NF022700.2
COORDINATES: protein motif:HMM:NF033206.1
COORDINATES: similar to AA sequence:RefSeq:WP_006616344.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_014559777.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010851068.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00964.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012258049.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_011056150.1
COORDINATES: similar to AA sequence:RefSeq:WP_012258051.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010513091.1
COORDINATES: similar to AA sequence:RefSeq:WP_012873133.1
COORDINATES: similar to AA sequence:RefSeq:WP_012192172.1
COORDINATES: protein motif:HMM:NF019013.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017316521.1
COORDINATES: similar to AA sequence:RefSeq:WP_020382302.1
COORDINATES: similar to AA sequence:RefSeq:WP_011937877.1
COORDINATES: similar to AA sequence:RefSeq:WP_011448457.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_014587228.1
COORDINATES: protein motif:HMM:NF014215.2
COORDINATES: similar to AA sequence:RefSeq:WP_015126537.1
COORDINATES: similar to AA sequence:RefSeq:WP_009200771.1
COORDINATES: similar to AA sequence:RefSeq:WP_015054378.1
COORDINATES: similar to AA sequence:RefSeq:WP_012410362.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF015423.2
COORDINATES: similar to AA sequence:RefSeq:WP_012625879.1
COORDINATES: similar to AA sequence:RefSeq:WP_006103542.1
COORDINATES: similar to AA sequence:RefSeq:WP_013033087.1
COORDINATES: protein motif:HMM:NF039800.1
COORDINATES: protein motif:HMM:NF028479.2
COORDINATES: protein motif:HMM:NF025601.2
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: similar to AA sequence:RefSeq:WP_012530989.1
COORDINATES: similar to AA sequence:RefSeq:WP_003102808.1
COORDINATES: protein motif:HMM:NF014522.2
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_010933584.1
COORDINATES: similar to AA sequence:RefSeq:WP_020565568.1
COORDINATES: protein motif:HMM:NF020337.2
COORDINATES: similar to AA sequence:RefSeq:WP_006511959.1
COORDINATES: protein motif:HMM:NF037429.2
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: protein motif:HMM:NF025670.2
COORDINATES: similar to AA sequence:RefSeq:WP_020520908.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007921877.1
COORDINATES: similar to AA sequence:RefSeq:WP_007923564.1
COORDINATES: similar to AA sequence:RefSeq:WP_019010750.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015258151.1
COORDINATES: similar to AA sequence:RefSeq:WP_010150337.1
COORDINATES: protein motif:HMM:NF016432.2
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012648374.1
COORDINATES: similar to AA sequence:RefSeq:WP_007917205.1
N-acyl homoserine lactonase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014431982.1
COORDINATES: similar to AA sequence:RefSeq:WP_018502591.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016845336.1
COORDINATES: protein motif:HMM:NF021622.2
COORDINATES: protein motif:HMM:NF013579.2
COORDINATES: similar to AA sequence:RefSeq:WP_008708445.1
COORDINATES: similar to AA sequence:RefSeq:WP_012518683.1
COORDINATES: protein motif:HMM:NF015438.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015060.2
COORDINATES: similar to AA sequence:RefSeq:WP_018513419.1
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013731838.1
nitroreductase family deazaflavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008448967.1
COORDINATES: protein motif:HMM:NF013228.2
COORDINATES: similar to AA sequence:RefSeq:WP_020603320.1
COORDINATES: similar to AA sequence:RefSeq:WP_016092864.1
COORDINATES: protein motif:HMM:NF013508.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559683.1
metal-sensitive transcriptional regulator
COORDINATES: protein motif:HMM:NF016130.2
COORDINATES: similar to AA sequence:RefSeq:WP_006425806.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020877696.1