Mycolicibacterium farcinogenes strain BKK/CU-MFGFA-001 plasmid unnamed3, complete sequence.
type: Entry
definition: Mycolicibacterium farcinogenes strain BKK/CU-MFGFA-001 plasmid unnamed3, complete sequence.
sequence version: NZ_CP081676.1
sequence date: 2023-04-29
sequence: sequence
division: CON
label: NZ_CP081676.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN20463126
keyword: RefSeq
source: Mycolicibacterium farcinogenes
organism: Mycolicibacterium farcinogenes
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP081676.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: JUL-2020\nAssembly Method :: Flye v. 2.8.3\nAssembly Name :: CU_Mfar_001\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 77x\nSequencing Technology :: Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/29/2023 05:02:45\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,342\nCDSs (total) :: 6,283\nGenes (coding) :: 6,214\nCDSs (with protein) :: 6,214\nGenes (RNA) :: 59\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 3\nPseudo Genes (total) :: 69\nCDSs (without protein) :: 69\nPseudo Genes (ambiguous residues) :: 0 of 69\nPseudo Genes (frameshifted) :: 28 of 69\nPseudo Genes (incomplete) :: 40 of 69\nPseudo Genes (internal stop) :: 7 of 69\nPseudo Genes (multiple problems) :: 5 of 69\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 23282
topology: circular
so has quality: SO_0000988
location: 1..23282
location: region:1-23282:1
RO_0002162: 1802

NZ_CP081676
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN20463126
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequences of Mycobacterium farcinogenes Isolated from Clinical Specimens from Patients in Thailand
author: Sodsai, P.
journal: Unpublished

2
title: Direct Submission
author: Sodsai, P.
journal: Submitted (30-JUL-2021) Microbiology, Chulalongkorn University, RamaIV, Bangkok 10330, Thailand

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23282:1
position: 23282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23282:1:source
so part of: sequence
organism: Mycolicibacterium farcinogenes
mol type: genomic DNA
strain: BKK/CU-MFGFA-001
isolation source: skin
host: Homo sapiens
plasmid: unnamed3
country: Thailand: Bangkok
lat lon: 13.73257102 N 100.53685625 E
collection date: 2020
collected by: King Chulalongkorn Memorial Hospital

1802
type: Taxonomy
SIO_000068: taxonomy

K6L26_RS31450
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31450
old locus tag: K6L26_31450
so part of: sequence
location: 165..1016
location: region:165-1016:1
so has part: feature:165-1016:1:exon
subclass of: SO_0000010

position:165:1
position: 165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016:1
position: 1016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165-1016:1:exon

K6L26_RS31450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31450
old locus tag: K6L26_31450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005149396.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein
translation: MSLSDLEVARGVVADLAAASSVVHPGLDWAVGVARGTQGTPEYWIASNEGSGCYIPAGVYVPASMPVCGDLDDGHWAGWFNPAETVLRAIEAHGSTVSAIATTFMSRSRLIDEDRPLLKDVAVGVAPVGGPDDAEASRPLQSRSHRLETVAPGLFQELSAADPATVDAYARYVTGQAVFNAGPELSSMAQAVARGVVSGKHPGDEEWTALRQEYTSAVLMAGSQRPGLMGIHEPHQLLTYQREFAVCRRLEAVVCWEHDSPADVVYAAWQAGVQVPFDVLERV
SIO_010081: K6L26_RS31450
subclass of: SO_0000673
so part of: K6L26_RS31450
location: 165..1016
location: region:165-1016:1
so has part: feature:165-1016:1:exon

WP_221853676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165-1016:1:exon

K6L26_RS31455
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31455
old locus tag: K6L26_31455
so part of: sequence
location: complement(1028..1423)
location: region:1028-1423:-1
so has part: feature:1028-1423:-1:exon
subclass of: SO_0000010

position:1028:-1
position: 1028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1423:-1
position: 1423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028-1423:-1:exon

K6L26_RS31455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31455
old locus tag: K6L26_31455
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNTPFSEEFARALDLAGQYHQLREDFDTALRSDRREYRRAWGGGRVDDKRTMSWDARAARSDQLSSIVDEYEKVWYQIQAVAPALAGVLPFPWLMRTGNRLPDWAERLRRRRAGTSWFVTPRAYKPSATV
SIO_010081: K6L26_RS31455
subclass of: SO_0000673
so part of: K6L26_RS31455
location: complement(1028..1423)
location: region:1028-1423:-1
so has part: feature:1028-1423:-1:exon

WP_221853677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1028-1423:-1:exon

K6L26_RS31460
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
gene: mobF
locus tag: K6L26_RS31460
old locus tag: K6L26_31460
so part of: sequence
location: complement(1457..6892)
location: region:1457-6892:-1
so has part: feature:1457-6892:-1:exon
subclass of: SO_0000010

position:1457:-1
position: 1457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6892:-1
position: 6892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457-6892:-1:exon

K6L26_RS31460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
gene: mobF
locus tag: K6L26_RS31460
old locus tag: K6L26_31460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014805429.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MGLHKLSAGDGYLYLIRQVAASDDTHRGKPSLADYYSEKGESPGRWMGSGLEGLGAPAGRDASDPMVAELWSVPEGSEVTEDQMKALFGEGLHPNADRITERLTGFGLGQEGAIAAARLGRPFRVNSTDNEWMRRLREGYADFNTTLGRDRQASLEPEERARIRTAVGREMFTETYGRAPADERELTGFVARKSRAQTQAVAGYDLTFTPVKSVSALWAIAPHDIAEKIEAAHHQAVADALAFLEKHAAFSRTGTNGVAQVDTTGFIAAAFDHRDSRAGDPNLHTHVAISNKVRIIGADGVPRWLALDGQPLHKAAVAASELYNTRLEAHLMAALSVEFAETRTKTGKRPVREIDGIPVELIECWSSRRAAVQHRVGELAKDFQAEHHREPTAVEMLALSQQATLETRQAKHEPRSRGEQRQSWRTEAVEVLGSHRELTRLITDVTGRSASRRPVAITGEWVTEQAESVIKTVSHDRSTWTVNHVRAEAHRLLRNVGRQGDIEALDRIVTTALDECSIALSTHADTEMNEPVALRRRDGASVYTRHDSAVYTSAAIRAAERRILDTADLGGGRVADDTSIGLAMLQAHAQHGLQLNAGQEALVRGMATSEARLQLALAPAGTGKTTAMSVLAAAWTNSGGNVIGLAPTAAAAEILAEDAHITTDTMAKFVQLAGTEPDRSARRDPARKWFNAIGPDTLLIVDEAGMASTFDLDEMITHAKAKGAKVCLVADDQQLTSISAGGVITDLASRPETLTLSAVVRFRDPAQSAASLAIRDGDPAGIAYYIDHGRVHVGADQTAADMAYQGWADDIAAGHRSVLLAPTNDLVAQLNERARLDRLRTSPKPSATVTLSDGLTASAGDWIITRKNARGLRMRNGTWVKNGHRWVIKSAHRDGSVTAYRLGSDPKTGTIRLPADYVAANTTLGYASTIHAAQGLTAGTQKTKGTCHIVGTDHLTRQQLYVAATRAKDENHVYFSTSEADPHRILAPKATQQPTAVDILTAILRRDGRQVSAHTAAHAETDPFVRLHGLASMYADALATGAEHLAGPDAMARIDQAATAITSDITDAEAWPVLRRNLALLALDGHDPVEALQHAAAKPLGNAVDVAAVLDWRLPTPAGTSLGTVGPLRWLPAIPAVLREEPVWGQYLTARAQRVTECAAQIRDTAQQWTQATAPAWARRLIAQQPGLTAEIAVFRAAHDVDAADTRLTGPGQHANRSAAVQKLIHDNVDAAITREHNSTQRWRPLVATLDPHILSDPYWPRLATYLDDAAQDGADVSAMLATAMAAHGPLPDELPAAALWWRLSEVPTTAVTLDHDPTDVEHNQQTPKPVIREPVDIPALRHHRDQARQRVRALEHAILHQNAGPAEQAAVADITALTTRHQHQRPYQHAYVHAQADWVRAQLGAETHHRLLDQLTHQLDAAQTAGNTALVDLYSSSRDYLARHTPDIEAAVEHAQQHREAAYAELLDAAGGPEGIVTDRDIQQRRNVALTADAQALREARAEATTLDNQLFRAEAAAARAFATHPDKDYDMATELPSLQTEVEFLEAAGARSPNAGYEVPETALEPLDDDHRRVLIAIAGSLETVQSLHLEPEADKAGVLDALAQAAHRGNHQGERRVLAIPASDRAQHYAAQHRYADTITSPVEARDNLGDGRWKLPEATLIVIDDADHLQPEQLRWLTEHADQTRTKLLLVTHTEASATPTAQQRRQPPPSRELTDTLRSHLPWHQHLGKGETLTAAQAPPTAIDRARTHLETISTTASSAGTEHQAQARQLLQRVDQLTANYHYRATDHRAHDLDRTQQRSHGLEL
SIO_010081: K6L26_RS31460
subclass of: SO_0000673
so part of: K6L26_RS31460
location: complement(1457..6892)
location: region:1457-6892:-1
so has part: feature:1457-6892:-1:exon

WP_221853678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1457-6892:-1:exon

K6L26_RS31465
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31465
old locus tag: K6L26_31465
so part of: sequence
location: 7159..7611
location: region:7159-7611:1
so has part: feature:7159-7611:1:exon
subclass of: SO_0000010

position:7159:1
position: 7159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7611:1
position: 7611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7159-7611:1:exon

K6L26_RS31465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31465
old locus tag: K6L26_31465
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKVGKASVYLSGDTRAVEYDDVEIYPNGVLRVSNRASRDVGWHGTAEGETKAQYYAPHAWWRVEPAKIRDYTIWVSDVDMQQTDPRWRQLATCVGRADVNERAQQYLRETYGDRDNLEEVVRSAFEKDGAKFGSKKGDRTVHFAHMKLP
SIO_010081: K6L26_RS31465
subclass of: SO_0000673
so part of: K6L26_RS31465
location: 7159..7611
location: region:7159-7611:1
so has part: feature:7159-7611:1:exon

WP_221853679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7159-7611:1:exon

K6L26_RS31470
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31470
old locus tag: K6L26_31470
so part of: sequence
location: complement(7630..8973)
location: region:7630-8973:-1
so has part: feature:7630-8973:-1:exon
subclass of: SO_0000010

position:7630:-1
position: 7630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8973:-1
position: 8973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7630-8973:-1:exon

K6L26_RS31470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31470
old locus tag: K6L26_31470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014805892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIVAGMFRRYDDGSAPLGDLSARGCSAGGSSPSRPANIGEHGRRPYNGSSRTKRRRGAIRTRPRANTRLRRRAARKPVPREHVWLDSELVYLELPEGAHKGVPCWTGGADYWVHITVATAYAAHYNQIRPRMSNGGIGRKALLTIAAARARYADHATGRNCRPTVAQLAAATGLSERQVQRGNEALILLGVATEILRGRQRTLTERLASWRVGDRGRGWASVWVLHDSTWLARVIHKMSPHLGGSLLSSKSSLLPQLTTEKRSPKGSRGCGARRRTSPDPSGSALARSWRADRHSPPWAQRHSADAWAALLAAPARHGWTARDLNQLITDWLGITGRTIPGAPHKPIGLLGAILGWHGTENLDDRPAAADEAREAEERAAAAARVARARQAIVLTPRGPNAGGTGRVAARAVALEAAHNAARKRTEETARQTAQLAAAVRRARGLET
SIO_010081: K6L26_RS31470
subclass of: SO_0000673
so part of: K6L26_RS31470
location: complement(7630..8973)
location: region:7630-8973:-1
so has part: feature:7630-8973:-1:exon

WP_245008818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7630-8973:-1:exon

K6L26_RS31475
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31475
old locus tag: K6L26_31475
so part of: sequence
location: complement(9295..9675)
location: region:9295-9675:-1
so has part: feature:9295-9675:-1:exon
subclass of: SO_0000010

position:9295:-1
position: 9295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9675:-1
position: 9675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9295-9675:-1:exon

K6L26_RS31475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31475
old locus tag: K6L26_31475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011896304.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTATLPVTVLNAATSAAADHGVDRSALLTDIVCFHYGRPDLMRHLPQQLLFESQPTTTAAADDAIGPHAKVRLPLSIAALVERDHEQLGMQRSTYLADIICRHMGFPHLVRELDKGFEKEVLPLAI
SIO_010081: K6L26_RS31475
subclass of: SO_0000673
so part of: K6L26_RS31475
location: complement(9295..9675)
location: region:9295-9675:-1
so has part: feature:9295-9675:-1:exon

WP_221853680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9295-9675:-1:exon

K6L26_RS31480
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31480
old locus tag: K6L26_31480
so part of: sequence
location: complement(9818..10252)
location: region:9818-10252:-1
so has part: feature:9818-10252:-1:exon
subclass of: SO_0000010

position:9818:-1
position: 9818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10252:-1
position: 10252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9818-10252:-1:exon

K6L26_RS31480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31480
old locus tag: K6L26_31480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAPDEFLTAATANIRAFNDATSMAQLFDRALTADEAYGILDATEVLVQLMPRALIRLSLAVGQSLAVTPADDAAIDNAVAPLTVAAMHMAQAAHFISEASETIDPLLAEVLDDTNDGEAHQRRGLVAVVRGWTAKTHRDRRAA
SIO_010081: K6L26_RS31480
subclass of: SO_0000673
so part of: K6L26_RS31480
location: complement(9818..10252)
location: region:9818-10252:-1
so has part: feature:9818-10252:-1:exon

WP_221853681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9818-10252:-1:exon

K6L26_RS31485
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31485
old locus tag: K6L26_31485
so part of: sequence
location: 10321..10722
location: region:10321-10722:1
so has part: feature:10321-10722:1:exon
subclass of: SO_0000010

position:10321:1
position: 10321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10722:1
position: 10722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10321-10722:1:exon

K6L26_RS31485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31485
old locus tag: K6L26_31485
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQFRFRVAGQIGFTLEQQVNGNSDERVFGNPLSSASPGAVQAATDAAKAAVLVGSQPGLFAFELVISNPLPWLWFVLILVRHCAKSPFWISLEVRYYQTNRHLLPVEQAEWVARWHLILKDILCSGMHPPEL
SIO_010081: K6L26_RS31485
subclass of: SO_0000673
so part of: K6L26_RS31485
location: 10321..10722
location: region:10321-10722:1
so has part: feature:10321-10722:1:exon

WP_221853682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10321-10722:1:exon

K6L26_RS31490
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31490
old locus tag: K6L26_31490
so part of: sequence
location: complement(11503..11910)
location: region:11503-11910:-1
so has part: feature:11503-11910:-1:exon
subclass of: SO_0000010

position:11503:-1
position: 11503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11910:-1
position: 11910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11503-11910:-1:exon

K6L26_RS31490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31490
old locus tag: K6L26_31490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEGKSIGLQLESTRPLSRAERRAQAARIHGEEEPADPTPTPATPPKPQDVTPTPKANPDTTEQQGSSGSVKLKPRRRATKGPFSTQLQVATLARIEWITRRGYVLTDTVDEAINAYLDAANVPRPDENGHMPPS
SIO_010081: K6L26_RS31490
subclass of: SO_0000673
so part of: K6L26_RS31490
location: complement(11503..11910)
location: region:11503-11910:-1
so has part: feature:11503-11910:-1:exon

WP_221853683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11503-11910:-1:exon

K6L26_RS31495
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31495
old locus tag: K6L26_31495
so part of: sequence
location: complement(11907..12731)
location: region:11907-12731:-1
so has part: feature:11907-12731:-1:exon
subclass of: SO_0000010

position:11907:-1
position: 11907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12731:-1
position: 12731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11907-12731:-1:exon

K6L26_RS31495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31495
old locus tag: K6L26_31495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017555459.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MTSEVAQPKLGGGRVLAIAMQKGGVSKTTTAVNVATALAKLGYRVLVIDMDQQAHCTMCLRVTLGPDDASLYEVLHPDRALRVPLRSVIKRSEFGVDVVPAHMALRELERTGLGSGGQLRLARELDSVIDDYDFVLIDCPPALGELTTAALAASDDVMAVLKPGGFEVSSMRELANTILDVQETLNADIEIRYVLLADFDGRPQAGKDVRNQLRSDWGAWDGGGAYLGEVPHTVRVVEAANKRMPIHEHAPTCTAAIAYQEVAERVAKRAKVAA
SIO_010081: K6L26_RS31495
subclass of: SO_0000673
so part of: K6L26_RS31495
location: complement(11907..12731)
location: region:11907-12731:-1
so has part: feature:11907-12731:-1:exon

WP_221853667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11907-12731:-1:exon

K6L26_RS31500
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31500
old locus tag: K6L26_31500
so part of: sequence
location: 12994..13194
location: region:12994-13194:1
so has part: feature:12994-13194:1:exon
subclass of: SO_0000010

position:12994:1
position: 12994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13194:1
position: 13194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12994-13194:1:exon

K6L26_RS31500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31500
old locus tag: K6L26_31500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPGVVVLLAVLLLAAMVSAGYMVMCAYIATVTGSTAGLADIGNAAALTAGFSAMAVVIRLGHWWR
SIO_010081: K6L26_RS31500
subclass of: SO_0000673
so part of: K6L26_RS31500
location: 12994..13194
location: region:12994-13194:1
so has part: feature:12994-13194:1:exon

WP_044524922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12994-13194:1:exon

K6L26_RS31505
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31505
old locus tag: K6L26_31505
so part of: sequence
location: complement(13471..14022)
location: region:13471-14022:-1
so has part: feature:13471-14022:-1:exon
subclass of: SO_0000010

position:13471:-1
position: 13471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14022:-1
position: 14022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13471-14022:-1:exon

K6L26_RS31505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31505
old locus tag: K6L26_31505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008264008.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTAWADESGSRPDLDPGAYLLAAVLCEDDDIADMRKTMEGLRIGEPKLHWHGSSDERRGELIQAVSNLPVTGFVVVHVDRDADDRRHRRKCMEFLLPHLAHMPCSTITFESRGQLDASDLATLQMLRSRRVVESTLRIEHAVGRIEPALWAADIVCGAVVQARTGNPDYLDALGGAVELHTI
SIO_010081: K6L26_RS31505
subclass of: SO_0000673
so part of: K6L26_RS31505
location: complement(13471..14022)
location: region:13471-14022:-1
so has part: feature:13471-14022:-1:exon

WP_069426293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13471-14022:-1:exon

K6L26_RS31510
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31510
old locus tag: K6L26_31510
so part of: sequence
location: complement(14085..14729)
location: region:14085-14729:-1
so has part: feature:14085-14729:-1:exon
subclass of: SO_0000010

position:14085:-1
position: 14085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14729:-1
position: 14729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14085-14729:-1:exon

K6L26_RS31510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31510
old locus tag: K6L26_31510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007170759.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTADLHPSTHLRAAAWVPDDVEDRPWEEAIALAADWIWERSQDEGLPPMVVSNAQKTGGLGYPDLDEIIRAGGHTTPKSRTRFDRGPVLAFVPGEQSLHLAMGLARGYSLAVVEGSQLPLTEWAAGAAAVNLLTGQTTTSEVPADARKDLDSVIFYGGRNGWTGPDEKAQVRRYLSDHINSGRLTPDQAASYALSSQSVSDRGAKKLRDLLSR
SIO_010081: K6L26_RS31510
subclass of: SO_0000673
so part of: K6L26_RS31510
location: complement(14085..14729)
location: region:14085-14729:-1
so has part: feature:14085-14729:-1:exon

WP_221853668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14085-14729:-1:exon

K6L26_RS31515
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31515
old locus tag: K6L26_31515
so part of: sequence
location: complement(14726..15313)
location: region:14726-15313:-1
so has part: feature:14726-15313:-1:exon
subclass of: SO_0000010

position:14726:-1
position: 14726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15313:-1
position: 15313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14726-15313:-1:exon

K6L26_RS31515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31515
old locus tag: K6L26_31515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005149407.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTAILGYARVSTTGQDLDAQLAALTAAGVDADRVFTDKLSGSARTERPGLAAMLDYARAGDLVVVAAIDRLGRSVAEVTRTIAQLGERQILLRALREGVDTGTPTGRAVAAIMATLAELELELGKERRAASRESRRNRQLPATKPPKLSPGRQEQLRRLAATGEPVRELAAAFGIGRATAYRYLAKPSDESGVEL
SIO_010081: K6L26_RS31515
subclass of: SO_0000673
so part of: K6L26_RS31515
location: complement(14726..15313)
location: region:14726-15313:-1
so has part: feature:14726-15313:-1:exon

WP_069426294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14726-15313:-1:exon

K6L26_RS31520
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31520
old locus tag: K6L26_31520
so part of: sequence
location: 15554..16312
location: region:15554-16312:1
so has part: feature:15554-16312:1:exon
subclass of: SO_0000010

position:15554:1
position: 15554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16312:1
position: 16312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15554-16312:1:exon

K6L26_RS31520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31520
old locus tag: K6L26_31520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005147288.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YfbU family protein
translation: MAVLNIRVDDQVRDELKDMADAEGVTVSEYVRDLLMAALVPGYESKEDHGDLPAPETMRIADRQVLSLLHRILARVLPEDNDDVDGDAGYQLGRARVIEAGYTGEYWREVAGFSPELSKRDCGRVLDILDMFRIITFSIRRLEKDGTTVDEDLKYKLEFRGFDGNDGLESHMARYVEFLMSDGRWAELHEQWNSNDEGNSHSLMLDTYMRMVAEHRRIKASRDRGFHREDYLLSMEELEQIAAARVHPSNRA
SIO_010081: K6L26_RS31520
subclass of: SO_0000673
so part of: K6L26_RS31520
location: 15554..16312
location: region:15554-16312:1
so has part: feature:15554-16312:1:exon

WP_221853669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15554-16312:1:exon

K6L26_RS31525
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31525
old locus tag: K6L26_31525
so part of: sequence
location: complement(16322..17020)
location: region:16322-17020:-1
so has part: feature:16322-17020:-1:exon
subclass of: SO_0000010

position:16322:-1
position: 16322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17020:-1
position: 17020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16322-17020:-1:exon

K6L26_RS31525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31525
old locus tag: K6L26_31525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQRTILAALTAQGRLDRFPGPWGEEISAFLSPDFDIDVVRARWRWYTVDLLGLATPDTPRSARVSLHRAIGALERSHDIEVIRGELPYSHPFGGYIDTHERPVGGIDLTELTHMDPRWPTRPRQAVWFRLPPPHPHYEDVPVDDQVAVINTIEGEWTPEPFEDFVESIDPLGRWYTPVGQFLTWIFCGSRPAEIKKIAARATEASAKLENRQVPAGHVRSPGAKRLLSQRQR
SIO_010081: K6L26_RS31525
subclass of: SO_0000673
so part of: K6L26_RS31525
location: complement(16322..17020)
location: region:16322-17020:-1
so has part: feature:16322-17020:-1:exon

WP_221853685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16322-17020:-1:exon

K6L26_RS31530
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31530
old locus tag: K6L26_31530
so part of: sequence
location: 17282..17578
location: region:17282-17578:1
so has part: feature:17282-17578:1:exon
subclass of: SO_0000010

position:17282:1
position: 17282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17578:1
position: 17578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17282-17578:1:exon

K6L26_RS31530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31530
old locus tag: K6L26_31530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAAVPLGEDPMPKELSCEDLADERPVVVTKFPETRSRPPWQFLLDDIESKLQELRMAVESILAAVLPFLHSTAEDPCWTCDDAADPGEVKVTVLPDK
SIO_010081: K6L26_RS31530
subclass of: SO_0000673
so part of: K6L26_RS31530
location: 17282..17578
location: region:17282-17578:1
so has part: feature:17282-17578:1:exon

WP_221853670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17282-17578:1:exon

K6L26_RS31535
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31535
old locus tag: K6L26_31535
so part of: sequence
location: complement(17697..17978)
location: region:17697-17978:-1
so has part: feature:17697-17978:-1:exon
subclass of: SO_0000010

position:17697:-1
position: 17697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17978:-1
position: 17978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17697-17978:-1:exon

K6L26_RS31535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31535
old locus tag: K6L26_31535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNTKAPISTESKNRRPESKQDSADAPQTRLNVNINSQTATALKTYADKHGLTVTEAVRRLIGVGDFIAKAQEEGKHILVRDGKETERVVFSY
SIO_010081: K6L26_RS31535
subclass of: SO_0000673
so part of: K6L26_RS31535
location: complement(17697..17978)
location: region:17697-17978:-1
so has part: feature:17697-17978:-1:exon

WP_049925660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17697-17978:-1:exon

K6L26_RS31540
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31540
old locus tag: K6L26_31540
so part of: sequence
location: 18572..19033
location: region:18572-19033:1
so has part: feature:18572-19033:1:exon
subclass of: SO_0000010

position:18572:1
position: 18572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19033:1
position: 19033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18572-19033:1:exon

K6L26_RS31540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31540
old locus tag: K6L26_31540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIAFETSAVGRFVDVPLQTSREADVAADGDDQQDPAENGPENGPNSTIPIPEEPPPVEGQPILSDAGTGVLPDASTSPVRASQQSVPKHRFRWWALGIIATLCLLTGTGTLLTAALSTHDGATQVASDIAKTAIPTLLTLLGTATAWAFKSED
SIO_010081: K6L26_RS31540
subclass of: SO_0000673
so part of: K6L26_RS31540
location: 18572..19033
location: region:18572-19033:1
so has part: feature:18572-19033:1:exon

WP_221853671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18572-19033:1:exon

K6L26_RS31545
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31545
old locus tag: K6L26_31545
so part of: sequence
location: 19033..19260
location: region:19033-19260:1
so has part: feature:19033-19260:1:exon
subclass of: SO_0000010

position:19260:1
position: 19260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19033-19260:1:exon

K6L26_RS31545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31545
old locus tag: K6L26_31545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSYPADEATKIITGCSEVIFEMDSANHLDVRVDRYPATSGPSGADAATDEVGDRTLCASDKRRWLSRWFQKRRG
SIO_010081: K6L26_RS31545
subclass of: SO_0000673
so part of: K6L26_RS31545
location: 19033..19260
location: region:19033-19260:1
so has part: feature:19033-19260:1:exon

WP_221853672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19033-19260:1:exon

K6L26_RS31550
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31550
old locus tag: K6L26_31550
so part of: sequence
location: 20316..20999
location: region:20316-20999:1
so has part: feature:20316-20999:1:exon
subclass of: SO_0000010

position:20316:1
position: 20316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20999:1
position: 20999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20316-20999:1:exon

K6L26_RS31550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31550
old locus tag: K6L26_31550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGGEEAAELEVWEPWVMAVFKLEAMQRQAATPPRPLVKRVPLVGSGPDPVGRSIAGFEAAVSAVLQLDHLAAVRDWDSWRPRVATIAATVSSIGEASVAHRPDIQAEIDALRVEEHRAYRRSNHVGTVISSASRRIYEVASRRREREREITAAIHPASLASSASLDDISSASKAFLGQRAVITETAVAQVNSQIRRVLDLTDETQRMSVVEWLSMCESQSHEMEGES
SIO_010081: K6L26_RS31550
subclass of: SO_0000673
so part of: K6L26_RS31550
location: 20316..20999
location: region:20316-20999:1
so has part: feature:20316-20999:1:exon

WP_221853673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20316-20999:1:exon

K6L26_RS31555
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31555
old locus tag: K6L26_31555
so part of: sequence
location: 20999..21271
location: region:20999-21271:1
so has part: feature:20999-21271:1:exon
subclass of: SO_0000010

position:21271:1
position: 21271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20999-21271:1:exon

K6L26_RS31555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31555
old locus tag: K6L26_31555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVANVFGMDPEGTRSGLGAAGLAAQAGVVAGASALPVGECTAPYTAAGQGLLSALEAEAAALVEFGLVTSAASVTTVETVENQNAGELGT
SIO_010081: K6L26_RS31555
subclass of: SO_0000673
so part of: K6L26_RS31555
location: 20999..21271
location: region:20999-21271:1
so has part: feature:20999-21271:1:exon

WP_221853674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20999-21271:1:exon

K6L26_RS31560
type: Gene
subclass of: SO_0000704
RO_0002162: 1802
locus tag: K6L26_RS31560
old locus tag: K6L26_31560
so part of: sequence
location: 21455..21919
location: region:21455-21919:1
so has part: feature:21455-21919:1:exon
subclass of: SO_0000010

position:21455:1
position: 21455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21919:1
position: 21919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21455-21919:1:exon

K6L26_RS31560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1802
locus tag: K6L26_RS31560
old locus tag: K6L26_31560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIAIAATAAITYALNHGADSRPTPSAEPTLTGPNASSAPTPTYSPSEQAAAKAKLCHVFEVSVRGQEGQGGIVMNGEPNVPLILRTVNSVVAVQNTTSPAIPESLMTAVQKYVETSTNLTTAALGKTPIDELTRLTEANNGATYALADECGVPR
SIO_010081: K6L26_RS31560
subclass of: SO_0000673
so part of: K6L26_RS31560
location: 21455..21919
location: region:21455-21919:1
so has part: feature:21455-21919:1:exon

WP_221853675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21455-21919:1:exon