Methylobacterium indicum strain VL1 plasmid pVL1_4, complete sequence.
type: Entry
definition: Methylobacterium indicum strain VL1 plasmid pVL1_4, complete sequence.
sequence version: NZ_AP024149.1
sequence date: 2023-04-28
sequence: sequence
division: CON
label: NZ_AP024149.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00238607
keyword: RefSeq
source: Methylobacterium indicum
organism: Methylobacterium indicum
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP024149.1.\nAnnotated at DFAST https://dfast.nig.ac.jp/\n\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3\nGenome Coverage :: 120x\nSequencing Technology :: PacBio RSII; HiSeq 2500\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/28/2023 10:57:43\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,633\nCDSs (total) :: 6,493\nGenes (coding) :: 6,407\nCDSs (with protein) :: 6,407\nGenes (RNA) :: 140\nrRNAs :: 12, 12, 12 (5S, 16S, 23S)\ncomplete rRNAs :: 12, 12, 12 (5S, 16S, 23S)\ntRNAs :: 100\nncRNAs :: 4\nPseudo Genes (total) :: 86\nCDSs (without protein) :: 86\nPseudo Genes (ambiguous residues) :: 0 of 86\nPseudo Genes (frameshifted) :: 33 of 86\nPseudo Genes (incomplete) :: 68 of 86\nPseudo Genes (internal stop) :: 17 of 86\nPseudo Genes (multiple problems) :: 26 of 86\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 36553
topology: circular
so has quality: SO_0000988
location: 1..36553
location: region:1-36553:1
RO_0002162: 1775910

NZ_AP024149
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00238607
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of a novel pathogenic Methylobacterium strain isolated from rice in Vietnam
author: Lai, K.
author: Okazaki, S.
author: Higashi, K.
author: Mori, H.
author: Toyoda, A.
author: Kurokawa, K.
journal: Unpublished

2
title: Direct Submission
author: Okazaki, S.
author: Lai, K.
journal: Submitted (06-NOV-2020) Contact:Shin Okazaki Tokyo University of Agriculture and Technology, Graduate School of Agriculture; Saiwaicho 3-5-8, Fuchu, Tokyo 183-8509, Japan URL :http://web.tuat.ac.jp/~okazaki/enindex.html

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36553:1
position: 36553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-36553:1:source
so part of: sequence
organism: Methylobacterium indicum
mol type: genomic DNA
strain: VL1
plasmid: pVL1_4
collection date: 2015-02-16

1775910
type: Taxonomy
SIO_000068: taxonomy

miv_RS32575
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32575
so part of: sequence
location: join(36302..36553,1..87)
location: region:1-36553:1
so has part: feature:36302-36553:1:exon
so has part: feature:1-87:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:36302-36553:1:exon

position:36302:1
position: 36302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-87:1:exon

position:87:1
position: 87
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

miv_RS32575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32575
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQFDLVKQREIAASGQLGMTFHNGMKFGSIRYNIPQLSHDFTKMRNDIIHEGVLSGTNFPNKSKSDCAAITASALNWLDEYVLKVLGIHQNVTNFPRWKSRDIEMFLPALTV
SIO_010081: miv_RS32575
subclass of: SO_0000673
so part of: miv_RS32575
location: join(36302..36553,1..87)
location: region:1-36553:1
so has part: feature:36302-36553:1:exon
so has part: feature:1-87:1:exon

WP_207184127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36302-36553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-87:1:exon

miv_RS32580
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32580
old locus tag: mvi_64930
so part of: sequence
location: 419..1384
location: region:419-1384:1
so has part: feature:419-1384:1:exon
subclass of: SO_0000010

position:419:1
position: 419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384:1
position: 1384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419-1384:1:exon

miv_RS32580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32580
old locus tag: mvi_64930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009870292.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSGIRAVADGLVDELKRSLPQQRKTQRGNLALLVATMLEVRSANLMDLAASLPREADRTDMRYQWIARTLSNTLIDPDAVMAPFAAEVLERAAADPDGIVLILDQSKLSDRHQVLMLAVRHGERALPLAWRVEATAGAIGFATQKELLGVVAPWVPAGAAVCLMGDRFYGTADLIALCQRRGWDYRLRLKGTLTVRDSSGRTTTAARAKSKDFYLEDVELTARRAKTNIGIIHDPGHAQPWIIAMSDNPGYGTTLAYSERWGIEPMFSDFKSRGFGIDNTQLRYPDRLARLILVMALALYSAVSTGHWDEVHHPTPAEKNI
SIO_010081: miv_RS32580
subclass of: SO_0000673
so part of: miv_RS32580
location: 419..1384
location: region:419-1384:1
so has part: feature:419-1384:1:exon

WP_207184128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419-1384:1:exon

miv_RS32585
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32585
old locus tag: mvi_64940
so part of: sequence
location: complement(1609..2706)
location: region:1609-2706:-1
so has part: feature:1609-2706:-1:exon
subclass of: SO_0000010

position:1609:-1
position: 1609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2706:-1
position: 2706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609-2706:-1:exon

miv_RS32585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32585
old locus tag: mvi_64940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011583106.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D-like domain-containing protein
translation: MNELTLHPNVYKTGASKGLISLLERVWVREHKPGDGTMYIISGFANYNGGVRFYDTFRRHIDDGGKVVAIFGGSTSSRLTSKQVVTELLNAGVEVHIINRKRLMHAKSYGVASEAGQMLVVTSGNFTGPGMSQNIELAVLLDRPTTHTLNFSWDDMVGSMLAQRWDYYQPDIANSAHPAWKLLYDEEEAGLKLDETDEVTMILRLSHADTARIMADRGTKASLGSQYFWLSKEAFDFLPPLTILNRRGYKTTYSCNINMKFVNIGIVRSVRVTFEADNNLDFRLGTGPLRGTKLVGRGDLAAITRTGEGSYELRLFKSGTPLYDALVPYAVTFVGHQGKQYGMIQNIDFYPIIGIRSTAARRIHS
SIO_010081: miv_RS32585
subclass of: SO_0000673
so part of: miv_RS32585
location: complement(1609..2706)
location: region:1609-2706:-1
so has part: feature:1609-2706:-1:exon

WP_207184129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1609-2706:-1:exon

miv_RS32590
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32590
so part of: sequence
location: complement(2703..4184)
location: region:2703-4184:-1
so has part: feature:2703-4184:-1:exon
subclass of: SO_0000010

position:2703:-1
position: 2703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4184:-1
position: 4184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2703-4184:-1:exon

miv_RS32590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011583107.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methyltransferase
translation: MKLMWHNYKYYPYERQLALREAKSILGSSNIIQTEHGLELSDTEPEYARRLVYFSQIHHQQLTIDTIQAKLERAASAGRKRQATRYSVHGLHEYKGKFNPQVAKSILNIFGVRNGDTVLDPFCGSGTTLVECAQLGVKGTGFDINPFAVFIANAKLQALSTPINELKKSLKKLETSFSRTRQWIGHILYDERGTYLSGWFDPNILGIIETVRARIESTTGEHGPIFLAIASNLLRDYSLQDPNDLRIRRRKTPLPETPFVEAFSAAAHGFLERVAEAQGILGLELPRGEAVLRDVAATLATTPVAQFDAALTSPPYAMALPYIDTQRLSLVWLNLVPSGSILGLEADLIGSREIRGRTRRDLVSRLTGNIDQIPDEQLALCRKMQSHLGPNDGFRRQAVPTLLYRYFGAMQRSFSAVRRLMKPNAPYALIVGHNHTVLGGVRFDFDTPRHLADLAVHVGWKIEELIELQTYQRYGYHMDNAVSAETLILLRNQ
SIO_010081: miv_RS32590
subclass of: SO_0000673
so part of: miv_RS32590
location: complement(2703..4184)
location: region:2703-4184:-1
so has part: feature:2703-4184:-1:exon

WP_207184130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2703-4184:-1:exon

miv_RS32595
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32595
old locus tag: mvi_64960
so part of: sequence
location: complement(4190..5350)
location: region:4190-5350:-1
so has part: feature:4190-5350:-1:exon
subclass of: SO_0000010

position:4190:-1
position: 4190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5350:-1
position: 5350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4190-5350:-1:exon

miv_RS32595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32595
old locus tag: mvi_64960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008872303.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methyltransferase
translation: MVSQPNLARDLQGFALDVSDISATLGAVDWNFSSRKRLSELENIHPYPAKFIPEIPGTLLDILPIPSNTAVLDPFVGSGTTLIECQKRGIRSVGIDLNPIACLISQIKTSPAPRHVEKALKEVLSYAKLMPDIELPDIPNLDHWFKRPISEAVERILSGIEAIRPPSEDLLRLALSSILVRISNQESDTRYAAVVKDVQPSDVYELFASAARKLDRAVQARDYHCTSSIILERDTLSVKPSEIGCPIGAVITSPPYPNAYEYWLYHKYRMWWLGYDPVAVKSKEIGARAHFFKANHHTADHFVEQMRGSFALIADVLVAGGFVCFVVGRSKIHGTIVDNAQIIQDIGHEFDFRTVFRTERMIAASRKTFNLSHANIKTETLLVLSR
SIO_010081: miv_RS32595
subclass of: SO_0000673
so part of: miv_RS32595
location: complement(4190..5350)
location: region:4190-5350:-1
so has part: feature:4190-5350:-1:exon

WP_207184131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4190-5350:-1:exon

miv_RS32600
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32600
pseudo: true
so part of: sequence
location: <5477..>5613
location: region:5477-5613:1
so has part: feature:5477-5613:1:exon
subclass of: SO_0000010

position:5477:1
position: 5477
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:5613:1
position: 5613
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5477-5613:1:exon

miv_RS32600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606213.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: miv_RS32600
subclass of: SO_0000673
so part of: miv_RS32600
location: <5477..>5613
location: region:5477-5613:1
so has part: feature:5477-5613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5477-5613:1:exon

miv_RS32605
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32605
old locus tag: mvi_64970
so part of: sequence
location: complement(5984..7495)
location: region:5984-7495:-1
so has part: feature:5984-7495:-1:exon
subclass of: SO_0000010

position:5984:-1
position: 5984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7495:-1
position: 7495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5984-7495:-1:exon

miv_RS32605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32605
old locus tag: mvi_64970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012333594.1
GO process: GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HlyD family type I secretion periplasmic adaptor subunit
translation: MSANPQPAANLPAPRRAPPPPARFSPRGLSERVRRLADDRSDQEFLPAHLEILDTPPSPYAVVFTWVMCLMFGAALVWSIFAHIDIHAVATARIQPSGRSKVVQPFDTGKVQTVSVENGSRVQAGDVLLTLEPTEAEADLSSRQGDLAALEAQIARRRATIEAVEKNQPTAKVDFPVDVPPAVRAREEGAMLAEIGQYITTREAFEAQLAEKVATQERFTASIAARMRLQAVLKERADMRETLVAKAAGTRAAVIDAVQQVEQVAADLAYDRGQLTEAKAAATSLQRRITQLASETVARQYQALTEAAQKRDALVQDVVKATLKRERTALKAPISGTVQQLAVTTLGQVVTAGQPLMVVVPTDGPIEVEAQVQNKDIGFVLPGQEAVVKIDAFPFTRYGSIEGRVVRVSRDAVDDREAGGGSDALSVARGQGLNPVTGTQKTQNLIFPVTVALSQTVIKADGKDVALTPGMTATVEIRTGRRRVIDYLLSPVRETTSTAGHER
SIO_010081: miv_RS32605
subclass of: SO_0000673
so part of: miv_RS32605
location: complement(5984..7495)
location: region:5984-7495:-1
so has part: feature:5984-7495:-1:exon

WP_244749158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5984-7495:-1:exon

miv_RS32610
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32610
old locus tag: mvi_64980
so part of: sequence
location: complement(7492..9699)
location: region:7492-9699:-1
so has part: feature:7492-9699:-1:exon
subclass of: SO_0000010

position:7492:-1
position: 7492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9699:-1
position: 9699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7492-9699:-1:exon

miv_RS32610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32610
old locus tag: mvi_64980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015928636.1
GO process: GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I secretion system permease/ATPase
translation: MQDNATHFDPSRAGPGAADLPAARPDSGLGALALVASFHQIPCEPAQVRHDLGLGQNPMSAVDIVRGARRLGLKGRLLQKQKPSRLDGIPLPAILEVEDGRFVVLGRRFEDGKLRIIDPVTRTADHVEAEAFLSRWTGTIVLVARRANLQTALHNFGLTWFAPSVWRYRRPLATVLVASLFIQLCALITPIFFQITIDKVLVHRGYSTLTLVAVGLVVLGLFHVVLQYLRGYILTHTASRIDVELGARLFDHLMRLPLGYFETRPAGQTVARVRELETVRNFLTGQALTSAIDVPFTLIFLAILYFYSPLLALIVTLSIPCYILVAVLLRPILRDKTLERFNRSAVSSQFLIESVVGIHTVKALAVEPTLKSQWDERLAAYVKTSFVAGLVASIGQNAIQYISKVTTALVLFFGAYAVMNGELTVGSLIAFNMIMGQVTAPILRLSQLWQDFQQVKVSLERLGDVLNCPPETRALAQAHLPPAKGQVTVRGVSFRYQPGTPEVLRDVSLDIPAGQVIGIVGPSGSGKSTFTKLLQRLYVPEKGQVLVDGVDIAQVDPAWLRRQIGVVLQENLLFNKTVFENIALANPGLSRAQVMQVARLAGADEFINRLPLGYDTPIEERGANLSGGQRQRLAIARALATNPRILILDEATSALDYESERIIQDNMKHIVRGRTVIIIAHRLAAVRICDRIIAVQEGRIVEDGTHRELVERPASLYGRLWRLQSDHGNAQGEAA
SIO_010081: miv_RS32610
subclass of: SO_0000673
so part of: miv_RS32610
location: complement(7492..9699)
location: region:7492-9699:-1
so has part: feature:7492-9699:-1:exon

WP_207184132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7492-9699:-1:exon

miv_RS33635
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS33635
old locus tag: mvi_64990
so part of: sequence
location: complement(9991..17409)
location: region:9991-17409:-1
so has part: feature:9991-17409:-1:exon
subclass of: SO_0000010

position:9991:-1
position: 9991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17409:-1
position: 17409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9991-17409:-1:exon

miv_RS33635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS33635
old locus tag: mvi_64990
inference: COORDINATES: protein motif:HMM:NF018319.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium-binding protein
translation: MIGAAVGGYYGANKGTFEGAKAGTQAAQLLLGLGIGSKSAFGLTDSSPFALRDPLIFDLDGNGIDLIPLKNSNAHFDFDGKGFAAKTGWVGPNDGLLVDLSNFDNKKITNKELVGAISGDAIKDLSLIDSNEDGKINSNDANFSSLSIWRDNNSDGVYQNGEINSLEFYNIESINLEKIDNNNVFDGTRTIANLQYTKKDGSIGVSTEVNFAVDLMSTRFNPPDGFKYNSNAILLPELIGYGQVTNLSYAMSINVNLRDSVEDFVLNANKYTYNGFNKKFEEIVYKWTGIENTPSENFGFNIDGNHLKIVEKFYGLSWRELHGSQNPNSLTGRSIENAYSSIMEQLRIRFISQLTVSQILIGMPPEQVFSTKFAPFTGVVFDRSTDVIGINLDFVVKGIIEQSKFIPEKDINKYYTESFLRLSDLKVDIFNGGGKSLIETIKDLPDFDQVPSMTRSQIFDSLEIAFDRRSHGSDLYIYSQGDDNYIIDERDVFGGSKDKLVLTDINSGSVSLTRNGDDVTLTLAPATPGGSDGGQITLRGQFDPFYDKGVEQIVFADGTSWSAEDMRRTIIAQATTPGNDTIVGSTGSDTLVGGRGNDLLQGRDGNDTYIYARGDGTDTITEWGFGGNDKLVLTDINPGDVSLVRVGSNGNAANDGTSVRLVIAPSSQEAGDGGSVLLTGGLEDAYDTGVERITFADGTVWTPADLRLKLLAQATTSGNDTIVGFNGDDTLVGGRGDDILKGGSGNDTYIYARGDGNDTITEWGFGGNDKLVLTDINPGDVSLVRVGSNGNAANDGTSVRLVIAPSSQEAGDGGSVLLTGGLEDAYDTGVERITFADGTVWTPADLRLKLLAQATTSGNDTIVGFNGDDTLVGGRGDDILKGGSGNDTYIYARGDGNDTITEWGFGGNKDKLVLTDINPGDVSLVRVGSDGNAANDGTSVRLVIAPSSQEAGDGGSVLLTGGLEDAYDTGVERIAFADGTVWTPADLRLKLLAQATTSGNDTIVGFNGDDTLVGGRGDDILKGGSGNDTYIYARGDGNDTITEWGFGGNDKLVLTDINPGDVSLVRVGSDGNAANDGTSVRLVIAPSSQEAGDGGSVLLTGGLEDAYDTGVERIAFADGTVWTPADLRLKLLAQASTSGNDTIVGFNGDDTLVGGRGDDILQGGSGNDTYIYARGDGNDTITEWGFGGNKDKLVLTDINPGDVSLVRVGSNGNAANDGTSVRLVIAPSSQEAGDGSSVLLTGGLEDAYDTGVERITFADGTVWTPADLRLKLLAQATTSGNDTIVGFNGDDTLVGGRGGDLLQGGSGNDTYIYARGDGNDTITEWGFGGNKDKLVLADIDPAAVSIARFGDDVILTIAPTTPGGSDGGQITLRGQLNASYDKGIEQVVFANGTIWSAAYLTELARNKLIDTIYGTDGNDTFATTESGAIIVGGRGDDTISASGTGSNTYQFSRGDGHDTITNTGSGYTRSDRLLLTDINPGEVTLTRYGDALTVAVAGTSDAVIAAYQFWGDGKQQGVGSIQFADGTVWDRAAIAAQAIIMGTAGNDSLSVPTNGVTVQAGRGDDVISVSGTGANTFRFSKGDGRDTITNPGSGYTRSDRLLLTDINPGEVTLTRSGDALTVAVAGTSDAITAAYQFWGGGQQQGVGSIQFADGTVWDRAAIAAQAIIMGTAGNDSLSVPTNGVTVQAGRGDDVISVSGTGANTFRFSKGDGRDTITNPGSGYTRSDRLLLTDINPGEVTLSRSGDALTVAIAGTSDAITAAYQFWGDGKQQGVGSIQFADGTVWDRTAIAANVVMMGTAGNDTLTGSTNSDILLGGRGNDYLSGRQGSDTYLYDRGDGSDIIDDTGTTDSDIDRLVLRGINPGAVSLTRSSNDVILTIAPSTSGGSDGGQVTLRSQFDPVYNKGVEQVVFADGTIWTADTLKKKISILLSTEGNDKITTGAVNDTIDGLGGDDYIETQDGNDYLIGNLGSDTLAGGSGDDTYLYARGDGDDTIIDTHWR…
SIO_010081: miv_RS33635
subclass of: SO_0000673
so part of: miv_RS33635
location: complement(9991..17409)
location: region:9991-17409:-1
so has part: feature:9991-17409:-1:exon

WP_280529481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9991-17409:-1:exon

miv_RS32685
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32685
old locus tag: mvi_65010
so part of: sequence
location: complement(18281..18970)
location: region:18281-18970:-1
so has part: feature:18281-18970:-1:exon
subclass of: SO_0000010

position:18281:-1
position: 18281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18970:-1
position: 18970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18281-18970:-1:exon

miv_RS32685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32685
old locus tag: mvi_65010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000904945.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLVGYMRVSTADERQSVDLQRDALMAAGVDDRHLYQDHASGSRDDRPGLKACVTYLKAGDNLVVWKLDRLGRSLPHLLEVMGDLRKRGVAFRSLTEAMDTGTPHGELLFSLFGALAQFERQLTRERVIVGLAAAKRRGRRGGRPPMIGGEQLEQITAALDGGASKASVCRSFKIARSTLIDTLVGLGPLGGPACLGPRHSLLALPHPLRGRHGPDQSGADFILIFIDAI
SIO_010081: miv_RS32685
subclass of: SO_0000673
so part of: miv_RS32685
location: complement(18281..18970)
location: region:18281-18970:-1
so has part: feature:18281-18970:-1:exon

WP_207184116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18281-18970:-1:exon

miv_RS32690
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32690
old locus tag: mvi_65020
so part of: sequence
location: complement(19145..19729)
location: region:19145-19729:-1
so has part: feature:19145-19729:-1:exon
subclass of: SO_0000010

position:19145:-1
position: 19145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19729:-1
position: 19729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19145-19729:-1:exon

miv_RS32690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32690
old locus tag: mvi_65020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020485770.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MPRTFAYLRVSTPGQTTDNQLTEIQAAGFTIEPRRLVTETVSGSTAVAQRRGFARLLDRLEANDVLVVTKLDRLGRNAMDVGATVARLDELGVRVHCLALGGVDLTSSTGKLTMAVINAVAEFERDLLIERTQAGLSRARAEGRRLGRPASLTGEQRAEVARQLGEGASVSALARSYKTSRQTILRIRDAAVSS
SIO_010081: miv_RS32690
subclass of: SO_0000673
so part of: miv_RS32690
location: complement(19145..19729)
location: region:19145-19729:-1
so has part: feature:19145-19729:-1:exon

WP_207184117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19145-19729:-1:exon

miv_RS32695
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32695
old locus tag: mvi_65030
so part of: sequence
location: 19988..20350
location: region:19988-20350:1
so has part: feature:19988-20350:1:exon
subclass of: SO_0000010

position:19988:1
position: 19988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20350:1
position: 20350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19988-20350:1:exon

miv_RS32695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32695
old locus tag: mvi_65030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020665240.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MRSGLALHISVCLSVAMVEDDVFRALADPTRRAIFEKLAGGSMNASALRQGMAISQPAMSQHLAVLRGAGLVREARQGRFVNYDVDPEGVALIAQWLAKYCAYWPTRIDALKVVLKEMDQ
SIO_010081: miv_RS32695
subclass of: SO_0000673
so part of: miv_RS32695
location: 19988..20350
location: region:19988-20350:1
so has part: feature:19988-20350:1:exon

WP_207184118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19988-20350:1:exon

miv_RS32700
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32700
old locus tag: mvi_65040
so part of: sequence
location: 20347..20703
location: region:20347-20703:1
so has part: feature:20347-20703:1:exon
subclass of: SO_0000010

position:20347:1
position: 20347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20703:1
position: 20703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20347-20703:1:exon

miv_RS32700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32700
old locus tag: mvi_65040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012652878.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDAACDEPGHGIEQAYELSEPPEKVWRALSIQALREHWLPEAALAGPEPVAVTPGEEVSYRMREAVPPYLESTVTFRIAPNGTGGTCLRIIHDLTDARFARLTKAAANRNAPLLRAA
SIO_010081: miv_RS32700
subclass of: SO_0000673
so part of: miv_RS32700
location: 20347..20703
location: region:20347-20703:1
so has part: feature:20347-20703:1:exon

WP_207184119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20347-20703:1:exon

miv_RS32705
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32705
old locus tag: mvi_65050
so part of: sequence
location: 20748..21359
location: region:20748-21359:1
so has part: feature:20748-21359:1:exon
subclass of: SO_0000010

position:20748:1
position: 20748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21359:1
position: 21359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20748-21359:1:exon

miv_RS32705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32705
old locus tag: mvi_65050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020809782.1
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease proteolytic subunit
translation: MRDAMQLVPMVVEQSSRGERSFDIYSRLLRERIVFLNGEVNDAVSALVCAQLLFLEAENPTRPIHLYINSPGGVVTSGFAMYDTMRHIRAPVHTLCMGMAYSMGSFLLMAGEPGERAVLPNASILVHQPLGGYKGQASDILIHAQETLRTKQRMTRLYAEHCGRSYEEFERAMDRDRFMTAEEALDWGLVDRILPPARTGGLA
SIO_010081: miv_RS32705
subclass of: SO_0000673
so part of: miv_RS32705
location: 20748..21359
location: region:20748-21359:1
so has part: feature:20748-21359:1:exon

WP_207184120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20748-21359:1:exon

miv_RS32710
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32710
old locus tag: mvi_65060
so part of: sequence
location: 21955..24363
location: region:21955-24363:1
so has part: feature:21955-24363:1:exon
subclass of: SO_0000010

position:21955:1
position: 21955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24363:1
position: 24363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21955-24363:1:exon

miv_RS32710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32710
old locus tag: mvi_65060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MTQDMTDSGVHLPEKDQNNIWYKFSNSNTVIVFVHGVLSDSRSCWYDKKYNSYWPHLIAGDAIFGSIDIFLGGYYTAADAGRYEIRNAADELLSALSRGGEKSVLSKDRIIFVCHSTGGIVARYILVNNQDIFRNKTIGMVLLASPSLGSSWANKIGWITNIYGHSIGQQLATGHWTLREIDAQFKNLVNEQKIRKLVGVEAYENHFIIHRKWLPDKHVVVSEESAGRYFGAPVMLRKTDHFSCCKPTDRKHPSYELLSDFIVKYFGNEVGAFVDGTSQMLSFVFERRLEYPKLKFSIINNTTVKAQITSIRVFRVASAIDNHTGFEYFTGPRVQLEFDMKRAIDGQSIELLKDRITNLDPGEAEAFQVDIEAENLVSIIDFEVDLLTIGARKAKIVRPQDVLFLHSPTKSDKGQLVSARRDDVFSALLSEREFKVWHPSSYSDCDAHSFVMLRSAATLGLKDPERSWNELRNKYEGRRDFGFILASYADVFQHDLAPESCKLYIEHLFSDPNKIRELPATDHEPVALTISRALQASGRVKLSANPTASLGSSTYEIEMMDRLLEVDPSISDSLFEYEDHGWSVESADRLLGFASAQLMKENLLRKIADEHGKMAIDFLIAMLVIQPQLHTEIDAILAKLTGQEPGEFDVDPEPSVQRWYTPWSEGKELAPEQLAWQPFSPRLARAFAAFQATDEQTVALYVIDRDDVVRYAVARGSNLTSDHLHVLAHDGCPSIRLVVAQHKDTTIKILRRLAADKNSIVRRWTSKNYNADQLIIEQLRNDPSQGVRDFINYNFKDHPDRL
SIO_010081: miv_RS32710
subclass of: SO_0000673
so part of: miv_RS32710
location: 21955..24363
location: region:21955-24363:1
so has part: feature:21955-24363:1:exon

WP_207184121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21955-24363:1:exon

miv_RS32715
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32715
old locus tag: mvi_65070
so part of: sequence
location: 24960..25343
location: region:24960-25343:1
so has part: feature:24960-25343:1:exon
subclass of: SO_0000010

position:24960:1
position: 24960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25343:1
position: 25343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24960-25343:1:exon

miv_RS32715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32715
old locus tag: mvi_65070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015822169.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MKVMHAVLTTPTFEADAADAGLSDDEVQAMSAWLSENPQAGDVMSGTGGARKVRFAGKGKGKSGGYRTIHYYGGNDVPLFLLALIDKGDRANLTKAERNALAAELSCLADDYRAGVAARLTTLKRRI
SIO_010081: miv_RS32715
subclass of: SO_0000673
so part of: miv_RS32715
location: 24960..25343
location: region:24960-25343:1
so has part: feature:24960-25343:1:exon

WP_244749153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24960-25343:1:exon

miv_RS32720
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32720
old locus tag: mvi_65080
so part of: sequence
location: 25343..25639
location: region:25343-25639:1
so has part: feature:25343-25639:1:exon
subclass of: SO_0000010

position:25639:1
position: 25639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25343-25639:1:exon

miv_RS32720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32720
old locus tag: mvi_65080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015930107.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTKLGERLLKSAQEARAIARGEMEPGRVFTPPSVDVAEIRRKTGLSQERFAQRFGFSPAAVRDWEQKRRTPDAAARTLLIVIDREPAAVERALSSEAA
SIO_010081: miv_RS32720
subclass of: SO_0000673
so part of: miv_RS32720
location: 25343..25639
location: region:25343-25639:1
so has part: feature:25343-25639:1:exon

WP_091754599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25343-25639:1:exon

miv_RS32725
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32725
old locus tag: mvi_65090
so part of: sequence
location: complement(25730..26059)
location: region:25730-26059:-1
so has part: feature:25730-26059:-1:exon
subclass of: SO_0000010

position:25730:-1
position: 25730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26059:-1
position: 26059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25730-26059:-1:exon

miv_RS32725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32725
old locus tag: mvi_65090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDWTAAAHRARHHLGARKRTFSEAQSLELIEFFAEHGTVTSAQMQQHGSADFVGTILGHVTTAVHGGGSVPKAGGWYRTEAAGSVYVIDPGFAEAWKAGWVAAGPSSMA
SIO_010081: miv_RS32725
subclass of: SO_0000673
so part of: miv_RS32725
location: complement(25730..26059)
location: region:25730-26059:-1
so has part: feature:25730-26059:-1:exon

WP_207184122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25730-26059:-1:exon

miv_RS33640
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS33640
old locus tag: mvi_65100
so part of: sequence
location: complement(26062..26421)
location: region:26062-26421:-1
so has part: feature:26062-26421:-1:exon
subclass of: SO_0000010

position:26062:-1
position: 26062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26421:-1
position: 26421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26062-26421:-1:exon

miv_RS33640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS33640
old locus tag: mvi_65100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAPKRPSLTNLAVPKPAPAAAVQPAEPTAPSLTPTTTAAVPVVPRTPVPRRSPPDMKTVQVRINRRGWSELRRLAEDNETVLEALMVEALNDVLLKYQKPPIVERRVGKRGTEDAEED
SIO_010081: miv_RS33640
subclass of: SO_0000673
so part of: miv_RS33640
location: complement(26062..26421)
location: region:26062-26421:-1
so has part: feature:26062-26421:-1:exon

WP_244749154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26062-26421:-1:exon

miv_RS32735
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32735
old locus tag: mvi_65110
so part of: sequence
location: complement(26466..27113)
location: region:26466-27113:-1
so has part: feature:26466-27113:-1:exon
subclass of: SO_0000010

position:26466:-1
position: 26466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27113:-1
position: 27113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26466-27113:-1:exon

miv_RS32735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32735
old locus tag: mvi_65110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012332933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MHVILVATQKGGAGKSTICAHFGALAQADGKTLLVDADPQASLTDWYTSREAETPLLAQADANSISQVLDAAADEGVKWVIIDSAPHNAPLMASLMARASVTVIPVRPGPFDLKAAGKTLDMARALKAPMACIINAAPPPTRESEPTVVAEARVVLSSMGAPVLPGQVSQRAAFSHALITGQSVTEYDPEGRAAGEILAMWSAVTKLAESFPRKS
SIO_010081: miv_RS32735
subclass of: SO_0000673
so part of: miv_RS32735
location: complement(26466..27113)
location: region:26466-27113:-1
so has part: feature:26466-27113:-1:exon

WP_207184123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26466-27113:-1:exon

miv_RS32740
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32740
old locus tag: mvi_65120
so part of: sequence
location: complement(27371..27898)
location: region:27371-27898:-1
so has part: feature:27371-27898:-1:exon
subclass of: SO_0000010

position:27371:-1
position: 27371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27898:-1
position: 27898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27371-27898:-1:exon

miv_RS32740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32740
old locus tag: mvi_65120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012634249.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARWLFTRLAVSQARPRLRDIPEEKRRLADALRVSAMAERDRLAAFVLDEAAAFAANPFPSTTAGVARQRWGLREIEFEAMEIAAAGLPCLLAALACLPSAEPLRQEILRTPAHVLYLLHRTEGGQIVGAVLHGKPRLALPLFVQPDPAPRLVARRQRRRQVSAQQLDLFAIDVP
SIO_010081: miv_RS32740
subclass of: SO_0000673
so part of: miv_RS32740
location: complement(27371..27898)
location: region:27371-27898:-1
so has part: feature:27371-27898:-1:exon

WP_244749155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27371-27898:-1:exon

miv_RS32745
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32745
old locus tag: mvi_65130
so part of: sequence
location: 28245..28970
location: region:28245-28970:1
so has part: feature:28245-28970:1:exon
subclass of: SO_0000010

position:28245:1
position: 28245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28970:1
position: 28970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28245-28970:1:exon

miv_RS32745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32745
old locus tag: mvi_65130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018264048.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHAYARGGGEMPAPRGFDEPHQRREVVSNRAAWCPDSAGPYRLPAGVRDRLSAALAGRKNRDAAFALAVFLARFWSSPRRLLCALPVDRRALAQHEALGLTEARVRGALAVLVEVGFLARYEPEAGKKYQRTEGGLQRRAILHRFGEEYAVAFTAANARAQAARGAPAPSRRPVPSRPQPQRAPASNVDASRAMPAPQVAQKQSLGGSRVIMGEMDQQNPTTVCEGLEAALERLRRGVCS
SIO_010081: miv_RS32745
subclass of: SO_0000673
so part of: miv_RS32745
location: 28245..28970
location: region:28245-28970:1
so has part: feature:28245-28970:1:exon

WP_244749156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28245-28970:1:exon

miv_RS32750
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32750
old locus tag: mvi_65140
so part of: sequence
location: complement(29288..30244)
location: region:29288-30244:-1
so has part: feature:29288-30244:-1:exon
subclass of: SO_0000010

position:29288:-1
position: 29288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30244:-1
position: 30244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29288-30244:-1:exon

miv_RS32750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32750
old locus tag: mvi_65140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011199109.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MEGAALNSQDAMDTERLAHLPDRKRRELQHAVRILFEEFEDAQKTKLSEKARRGRILKLVLFGSYARGDWVEDRGSGYLSDYDLLVVVNDARFAEQYEAWEKAEERLLQELSLGGRLATPVNVIVHTLQDVNDQLAQGRPFFVDIARDGIVLHELAGFPFAAPKPLTEEERRAEAARNFEHWFPNAIEFQAGAAFYRDRGNLGIAAFELHQAAERLYHCVLLVLTLYSPKLHRLTKLRSQAESVDARLIPVWPRDTKFARRCFALLNRAYVDARYSPHYEITSEELAWLVERVSALQESVAAICAERLENAGTSRPDA
SIO_010081: miv_RS32750
subclass of: SO_0000673
so part of: miv_RS32750
location: complement(29288..30244)
location: region:29288-30244:-1
so has part: feature:29288-30244:-1:exon

WP_244749157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29288-30244:-1:exon

miv_RS32755
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32755
old locus tag: mvi_65150
so part of: sequence
location: complement(30437..30718)
location: region:30437-30718:-1
so has part: feature:30437-30718:-1:exon
subclass of: SO_0000010

position:30437:-1
position: 30437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30718:-1
position: 30718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30437-30718:-1:exon

miv_RS32755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32755
old locus tag: mvi_65150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013044870.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRMPTPQAASAEATRTRLAQAQNRLQQLDARAAQEERKRDTRRKIILGGLLLEAAGKERRFAEALDELMTRIQRTQDKTAFAEWRPAKPAGRS
SIO_010081: miv_RS32755
subclass of: SO_0000673
so part of: miv_RS32755
location: complement(30437..30718)
location: region:30437-30718:-1
so has part: feature:30437-30718:-1:exon

WP_207184140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30437-30718:-1:exon

miv_RS32760
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
gene: traA
locus tag: miv_RS32760
old locus tag: mvi_65160
so part of: sequence
location: 30871..33918
location: region:30871-33918:1
so has part: feature:30871-33918:1:exon
subclass of: SO_0000010

position:30871:1
position: 30871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33918:1
position: 33918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30871-33918:1:exon

miv_RS32760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
gene: traA
locus tag: miv_RS32760
old locus tag: mvi_65160
inference: COORDINATES: protein motif:HMM:TIGR02768.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIYHLSIKAVSRAGGRSATAAAAYRSASLIADTRTGEIHDYQRRTGVEASFIVAPDGAAWAQDRAALWNVVEAAERRKDAKVAREYQVALPHELTPEERQALARDFAEHLCARYGVAADVAIHAPGREGDERNWHAHILTTTRAVTADGLGAKTRVLDVATTARVEVEALRAIWEERANRHLAQAGLAVAINRRSHLDRGSGLAPGEHVGVHATQMQRRGKPGVDRVAIDPETAARNAALIMRRPGEVLRLITDEKAVFTRQDVARALHRAGIDEPAAFQAALAQVMASKALVRLSVGEPSAGDCFTTQTLFSTETEMAASADRMACYRGHTVTKAQLDAVLSLHPELAEEQRAAVRYVTGPERIACVVGLAGAGKSTMLGAARKAWEAAGYQVHGAALAGKAAEGLQVSSGIPSRTLASWQLAWANEQDRLRIRDVLVIDEAGMVSSRQLAQFVERVELTGAKVVLVGDPEQLQPIGPGAGFRALCERTGFLELTTIRRQRREWQREASVALGRRDTRAGLEAYQANGSIRFAADGMAAREHLVADYLADRSAHPVGTRVALAHTRAEVRALNDAIRGHLRETGALRDEAGFASESAGALRFASGDRVVFLRNDRALGVKNGTLGTASAVAEGRLCVVLDDGRTVRIAQGDYAAVDHGYATTIHKSQGATVDRAFVLASAGLDRHLAYVAMTRHREGVGLYAGQDTFPDFEALAARLGRGRLKASVLDHLGEAPEQAGLPPGDRPMPLLEPRRVFTETAEAIGRAFAEYQLNTRLEPGKPGFGLKAAFTDPLAVATRLREAFARSGHRADATAHLLETEPERFGHLHGLRRRLLGDNRERREARAALPKVAAQVRTLLREWRETYDTTVAQETRERELAQVEIPGLSAAAAGFLAAYRAGSPEAGQALITQALVTEEGQGVMGEFRAVIQAATERAWAKGRSLSKYSFIGIPGMAEARGEALGETIVAVQTIEREGRRIVAEQERAEIRLELQHDQERAWRRGLDRGGPGFGL
SIO_010081: miv_RS32760
subclass of: SO_0000673
so part of: miv_RS32760
location: 30871..33918
location: region:30871-33918:1
so has part: feature:30871-33918:1:exon

WP_207184124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30871-33918:1:exon

miv_RS32765
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32765
old locus tag: mvi_65170
so part of: sequence
location: 34055..35089
location: region:34055-35089:1
so has part: feature:34055-35089:1:exon
subclass of: SO_0000010

position:34055:1
position: 34055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35089:1
position: 35089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34055-35089:1:exon

miv_RS32765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32765
old locus tag: mvi_65170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019170003.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MRYFAGLDVSLNETALCVVDEVGTIIREGKVGSEPAALIVWLADLGVPLDRIGLEAGPLSPWLYEGLREAGYPAVCIETRRMKGATAAMAVKTDRNDAGAIAQAIRVGWYTAVHVKTALSQELRLLLTNRKTLLATQLAIDNEIRGTLKVFGLKIGPVTPATFHDRVVDLLADRPRLLAMVVPMLKAREDLRRQIDVLHRMLLRATKEHPVCRRLMTVPGVGAVVALTYATAIDAPERFARSRDVGAHFGLTPRKYASGEIDRNGRISKSGDHMARQALFQAALSLITRTQRWSALKAWGMALAKRRGLKRATVAVARKLAVLLHRMWSDGTDFRWTRDAAAAS
SIO_010081: miv_RS32765
subclass of: SO_0000673
so part of: miv_RS32765
location: 34055..35089
location: region:34055-35089:1
so has part: feature:34055-35089:1:exon

WP_207184125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34055-35089:1:exon

miv_RS33645
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS33645
pseudo: true
so part of: sequence
location: <35341..35560
location: region:35341-35560:1
so has part: feature:35341-35560:1:exon
subclass of: SO_0000010

position:35341:1
position: 35341
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:35560:1
position: 35560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35341-35560:1:exon

miv_RS33645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS33645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009602860.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: miv_RS33645
subclass of: SO_0000673
so part of: miv_RS33645
location: <35341..35560
location: region:35341-35560:1
so has part: feature:35341-35560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35341-35560:1:exon

miv_RS32770
type: Gene
subclass of: SO_0000704
RO_0002162: 1775910
locus tag: miv_RS32770
old locus tag: mvi_65190
so part of: sequence
location: 35795..36088
location: region:35795-36088:1
so has part: feature:35795-36088:1:exon
subclass of: SO_0000010

position:35795:1
position: 35795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36088:1
position: 36088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35795-36088:1:exon

miv_RS32770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1775910
locus tag: miv_RS32770
old locus tag: mvi_65190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQFNITNLQVSDINFEVPSAFGKWDFEQAAVYSQIISRINNEDIMGNTYFATNAGINFQSSINDLEAACDEIIDICLVLSFINARCVAPSSTTTYS
SIO_010081: miv_RS32770
subclass of: SO_0000673
so part of: miv_RS32770
location: 35795..36088
location: region:35795-36088:1
so has part: feature:35795-36088:1:exon

WP_207184126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35795-36088:1:exon