Methylomagnum ishizawai strain RS11D-Pr plasmid pRS11DPr6, complete sequence.
type: Entry
definition: Methylomagnum ishizawai strain RS11D-Pr plasmid pRS11DPr6, complete sequence.
sequence version: NZ_AP019789.1
sequence date: 2023-05-19
sequence: sequence
division: CON
label: NZ_AP019789.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00172935
keyword: RefSeq
source: Methylomagnum ishizawai
organism: Methylomagnum ishizawai
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomagnum.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP019789.1.\nAnnotated at DFAST https://dfast.nig.ac.jp/\n\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.7\nGenome Coverage :: 725x\nSequencing Technology :: Illumina NextSeq, GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/07/2023 06:14:59\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,693\nCDSs (total) :: 4,634\nGenes (coding) :: 4,584\nCDSs (with protein) :: 4,584\nGenes (RNA) :: 59\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 4\nPseudo Genes (total) :: 50\nCDSs (without protein) :: 50\nPseudo Genes (ambiguous residues) :: 0 of 50\nPseudo Genes (frameshifted) :: 17 of 50\nPseudo Genes (incomplete) :: 34 of 50\nPseudo Genes (internal stop) :: 3 of 50\nPseudo Genes (multiple problems) :: 4 of 50\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 28497
topology: circular
so has quality: SO_0000988
location: 1..28497
location: region:1-28497:1
RO_0002162: 1760988

NZ_AP019789
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00172935
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Methylomagnum ishizawai strain RS11D-Pr
author: Asakawa, S.
author: Khalifa, A.
author: Lee, C.G.
author: Ogiso, T.
author: Ueno, C.
author: Dianou, D.
journal: Unpublished

2
title: Direct Submission
author: Asakawa, S.
author: Watanabe, T.
journal: Submitted (28-JUN-2019) Contact:Susumu Asakawa Nagoya University, Graduate School of Bioagricultural Sciences; Chikusa, Furocho 1, Nagoya, Aichi 464-8601, Japan URL :https://www.agr.nagoya-u.ac.jp/%7Esoil/ Soil_Biology_and_Chemistry/toppupeji.html

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28497:1
position: 28497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-28497:1:source
so part of: sequence
organism: Methylomagnum ishizawai
mol type: genomic DNA
strain: RS11D-Pr
isolation source: rice rhizosphere
culture collection: JCM:18894
type material: type strain of Methylomagnum ishizawai
plasmid: pRS11DPr6
country: Japan:Aichi, Anjo, Anjo Agricultural and Extension Centre
lat lon: 34.97 N 137.07 E
collection date: 2003-08-11

1760988
type: Taxonomy
SIO_000068: taxonomy

K5658_RS23140
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23140
so part of: sequence
location: join(27860..28497,1..331)
location: region:1-28497:1
so has part: feature:27860-28497:1:exon
so has part: feature:1-331:1:exon
subclass of: SO_0000010

80837159
type: Gene
SIO_000068: ncbigene

urn:…
SIO_000300: 1
SIO_000628: feature:27860-28497:1:exon

position:27860:1
position: 27860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-331:1:exon

position:331:1
position: 331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

K5658_RS23140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDGVDFSTAIAGPEPRRPKSGNRCGHDPERPRLFTAPKHHANRPLILRRIGERIRDYFRDPSTLPTLNAANRSARQQRSERREACCALLQALMHYTDLVTLRVGIPQADGGMAGIPMETKRDAEGRALVIGLAERAGLTVRRAWRAIADLKKAGIITVHPRCAKIEDAVYKGFAAIRAVNHHLFNALGLGQWLRHERNKAQQRRNKAYDKAKKRKLIEMGREMMAAAALKNATRKPKAEAPEPEEPPTGPKTANDIAAEAFFAYAHDFLGDQPKPQPEPAQRATASNDPTLDLVKRLMAQGLSQIQAIDEALRILGAKPDTS
SIO_010081: K5658_RS23140
subclass of: SO_0000673
so part of: K5658_RS23140
location: join(27860..28497,1..331)
location: region:1-28497:1
so has part: feature:27860-28497:1:exon
so has part: feature:1-331:1:exon

WP_221067507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27860-28497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-331:1:exon

K5658_RS23145
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23145
old locus tag: MishRS11D_46130
so part of: sequence
location: 923..1534
location: region:923-1534:1
so has part: feature:923-1534:1:exon
subclass of: SO_0000010

80837160
type: Gene
SIO_000068: ncbigene

position:923:1
position: 923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1534:1
position: 1534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923-1534:1:exon

K5658_RS23145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23145
old locus tag: MishRS11D_46130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015821232.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MQTPTKRPRRVAFYLRVSTGEQTTENQRRELEAVAERAGWTLAGVYEDAGISGAKGRDKRPAFNRLLQDASRRQFDIVAAWSVDRLSRSLQHLVSFLEEVHHLGIDLYLHRQGVDTTTPAGRAMFQMLGVFSEFERAMIRERVRAGLGRARANGARLGRPKVGAGIEAAIRADLDAGRGILATAKKHGVGTSVVQRVKAVMGS
SIO_010081: K5658_RS23145
subclass of: SO_0000673
so part of: K5658_RS23145
location: 923..1534
location: region:923-1534:1
so has part: feature:923-1534:1:exon

WP_221067508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:923-1534:1:exon

K5658_RS23150
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23150
old locus tag: MishRS11D_46140
so part of: sequence
location: complement(1733..3220)
location: region:1733-3220:-1
so has part: feature:1733-3220:-1:exon
subclass of: SO_0000010

80837161
type: Gene
SIO_000068: ncbigene

position:1733:-1
position: 1733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3220:-1
position: 3220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1733-3220:-1:exon

K5658_RS23150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23150
old locus tag: MishRS11D_46140
inference: COORDINATES: protein motif:HMM:NF037736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase
translation: MLLDTPETLARFLQDIADELDIPDHAYEEATLKYEEIGEYLASDDSELRKHNPQIYPQGSFRLGTVVQPIGRQGEYDIDLVCMLDINKESITQEELKDKVGDRLITRDDLKEIIKSSRRCWTLKYPQQDGMPSFHMDVLPSIPNQDRLPTGILLTDTELTRWQKSNPIAYAEWFKKRMEVVFTKRRRIAAEALSESVEQVPEWRIKTPLQRSIQILKRHRDIHFQKKPDLRPVSIIITTLAAKAYRNQDDIFDALIDITKDMPVFIENRNGKWWVQNPVDDGENFADKWNEYPERREAFIAWLKKVESDVTNISRTRTIDEGLVIAQESLGSGIGTNNIKNSLGISTIGSPLNKAPLVPILGDTQHVKKPQWPIHETENYHINITASVYSKNKHGNPKKLLWPLTKDKTVPKNIFINFKTNTNVPEPYLIQWQVANTGQEAVNARQLRGDFYKSDEEKGVRWESTTYRGTHWVEAFVIKSGICVARSGKIMVRVR
SIO_010081: K5658_RS23150
subclass of: SO_0000673
so part of: K5658_RS23150
location: complement(1733..3220)
location: region:1733-3220:-1
so has part: feature:1733-3220:-1:exon

WP_221067509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1733-3220:-1:exon

K5658_RS23155
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23155
old locus tag: MishRS11D_46150
so part of: sequence
location: complement(3261..4241)
location: region:3261-4241:-1
so has part: feature:3261-4241:-1:exon
subclass of: SO_0000010

80837162
type: Gene
SIO_000068: ncbigene

position:3261:-1
position: 3261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4241:-1
position: 4241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3261-4241:-1:exon

K5658_RS23155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23155
old locus tag: MishRS11D_46150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008253493.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CBASS cGAMP-activated phospholipase
translation: MTTENHNEKKTPDKFQILSLDGGGIKGIFTAALLAAIEEDLNISIINHFDLIAGTSTGGIIAIGLGLGLKPREIVEFYFSQGPAIFKKKFGFNWLNHLLSRKFSDKPLEKALKHCFKEEKRFGDSTKRLVIPTYNITADDIYIFRTPHHEKLRRDHKVPAWKVAKATSAAPTFFPCVKDIDNMRLIDGGVWANNPSLVAVVEACGPLEIPLSAIHILSIGTFNDVNSRPDRLDTGGILAWGRNNAAIDIIMRGQSIGVNNQVKFLLGENHVERLDPKVAANEFTLDGIHKTSDLIGKAAYHSRKFAPTFKEKFSGHIAPEYTPIYR
SIO_010081: K5658_RS23155
subclass of: SO_0000673
so part of: K5658_RS23155
location: complement(3261..4241)
location: region:3261-4241:-1
so has part: feature:3261-4241:-1:exon

WP_221067510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3261-4241:-1:exon

K5658_RS23845
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23845
old locus tag: MishRS11D_46160
so part of: sequence
location: complement(4259..7219)
location: region:4259-7219:-1
so has part: feature:4259-7219:-1:exon
subclass of: SO_0000010

80837256
type: Gene
SIO_000068: ncbigene

position:4259:-1
position: 4259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7219:-1
position: 7219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4259-7219:-1:exon

K5658_RS23845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23845
old locus tag: MishRS11D_46160
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015177884.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MKKPPIAAIKHPADSRTNIPTAELRDFVAEDENAPKTMLYPRDTSLDPQLVWKGKDEQDSADLEVPVVPIYIQEKIHPQALIEDIRANAQGDGGHGQADLFGDFNGIDFEQLIEFYQHNHHWSNRMILGDSLQVMASLSEKEGMKGKVQMIYIDPPYGIKFGSNWQVSTRKREVKDGKAEDFTRQPEQIKAFRDTWELGIHSYLAYLRDRLQVAKELLTESGSVFVQIGDENIHLVRCLMDEIFGSENFVSQIFFQKTGGLTPKAISNIGDHILWYAHSKEHLKYRQLFSYESEPAEDDNYYVWLQLPDGSYRRMIPEEKRREIPLPTGSRIFRHGPLSSSGDSNTDQNFTFHGKTFVPAKGNHWKTSPKNLDRVGKIGHIFMMGNQPAWKLFWDYSPGRQIQNVWLDTQSGGFNESGIYVVQTTVKVIERCLLMTTDPGDLVLDPTCGSGTTAYVAEQWGRRWITTDTSRVALALARTRLMSAKFPYYFLADSEEGRKKAMEVTGKIPAQDAPRPGGDIKKGFVYKTVPHITLKSIANNPEIDTIHAKWQEKLEPLRTELNQLRGQSWEEWEIPREAETPWDDGERKLFARVQTLRQAAEPDTIAIAGALHALNSNLKREYKLDTLPERPADPWPEAHAEIHRQWWAARRERQREIDASIARNADTETLYDQPYEDKKRVRVTGPFTVESLSPHRVLPVDDDGAAPPRAETQAKQNAADFATMILDNLRKAGVQNTVKAERLRFDRLEPYAGRWLHAEGEYTEADGAVKRVAVSIGPEHGTVGAAQVKEASKEAVQGLGFDMLLVCGFAFDPSVTEEAKRYGKLVILPVKMNPDLAMGDDLLKKTGSGNLFMIFGEPDIQPVDPKTGKLIPQKDGTLQIEIKGLDIYDPTTGQIRSHSTADIACWFIDTNYNGESFFVRHAYFTGGDEPYEKLRKALKADIDEAAWEALYSTKSRPFPKPETGKIAVKVINHYGDEAVKVFSVKD
SIO_010081: K5658_RS23845
subclass of: SO_0000673
so part of: K5658_RS23845
location: complement(4259..7219)
location: region:4259-7219:-1
so has part: feature:4259-7219:-1:exon

WP_246628715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4259-7219:-1:exon

K5658_RS23165
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23165
old locus tag: MishRS11D_46170
so part of: sequence
location: complement(7245..7766)
location: region:7245-7766:-1
so has part: feature:7245-7766:-1:exon
subclass of: SO_0000010

80837163
type: Gene
SIO_000068: ncbigene

position:7245:-1
position: 7245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7766:-1
position: 7766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7245-7766:-1:exon

K5658_RS23165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23165
old locus tag: MishRS11D_46170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWIDILQVVIGGFIGWALHGSISFYIQRKNIRTYLSAAIPIRMYEVKENCKIMKDYFDKHVSIGKTISISPTYKADSLESITCVKQQVITYLTKDEILKFAQFIFCLSEIESLYESFTDHIRDHENKKTTIDNEQYMHILSHIEKAINLVNQLPDKPTGLRDLPSEYHPIWTF
SIO_010081: K5658_RS23165
subclass of: SO_0000673
so part of: K5658_RS23165
location: complement(7245..7766)
location: region:7245-7766:-1
so has part: feature:7245-7766:-1:exon

WP_221067511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7245-7766:-1:exon

K5658_RS23170
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23170
old locus tag: MishRS11D_46180
so part of: sequence
location: complement(7826..10927)
location: region:7826-10927:-1
so has part: feature:7826-10927:-1:exon
subclass of: SO_0000010

80837164
type: Gene
SIO_000068: ncbigene

position:7826:-1
position: 7826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10927:-1
position: 10927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7826-10927:-1:exon

K5658_RS23170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23170
old locus tag: MishRS11D_46180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008476353.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MATTIENPVINSPFEEPRRHFLFTEEGITDTLVSGRRKSVYFVPIAKPKSRGKNLELDFPVESRPEENRLINDIRQRVGLWRANGYPHATQTTRRLLAHWNDPLRERRLFFCQREAVETLIYLTEIAPTRDANFGSELLHRLDNENRQATPAGRVALKRYAAKMATGSGKTVVMAMLIAWQALNKQASKRSSRESKLFSDAFLIVAPGITIKDRLRALLPSDPDNYYRKLDLVPDTLLEQLGSAKIVITNYHSFMLREHGDAAALTKKILTGKQEASPFRETWDQMARRVCGELGTKKQIVVLNDEAHHCYHGKPIPEELKEKLTGEDKKAADEREEEARVWISGLEAIDRKIGVKSVFDLSATPFFLAGSGYGEGTLFPWVVSDFSLIDAIESGIVKVPRVPVEDNTDNHGQPVFRNLWKLIGKKLPKGTRTKKNENPAPELPQELESALLHLYGHYEKSYALYQQQAGQGFDVMPPVFIVVCSNTQVSNLVFNWIAGYEKALGDGQTVIVPGNLPVFSNVDQGSPANTWTHRPNTLLIDSQQLESGEALTDDFRASAAREIEEFKAEIRERFPGRDADKLTDEGILREVMNTVGKRGKLGEHIKCVVSVSMLTEGWDVNTVTHIMGVRAFGTQLLCEQVIGRGLRRMSYEAEPHTVAVDGETHAFDAFPVEYAEVYGVPFEFLPTAGGKATPKPPKDTVFVHSIEEREAARIAFPRVQGYRYEIAAERLAAKFTESSRLVLSTKHIPTQVENAPIVGESSIQSLWELKERRPNEVAFLLAKLVLEKYFRQEDDTEHAIGGPVQNQAKGWLFPQVLGIAKQWLHGGHVECHDHTFPQMLLLVELAHTAADRIYQAIVGGTDGQAEEPRLKPIMQPYNTLGDTGGVGYHTTKPSYRTTKSHISHVVMDSGWEGTVAQALEHMDEVKAYAKNIARLDFTVPYTLGGQERSYLPDFIAKIDDGHGPDDLLNLIIEVSGERRDDKDAKVATMESLWVPAINNDGRYGRWGFIQIKDPHQVMKEIRKQLMAHLLHAA
SIO_010081: K5658_RS23170
subclass of: SO_0000673
so part of: K5658_RS23170
location: complement(7826..10927)
location: region:7826-10927:-1
so has part: feature:7826-10927:-1:exon

WP_221067512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7826-10927:-1:exon

K5658_RS23175
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
gene: parA
locus tag: K5658_RS23175
old locus tag: MishRS11D_46190
so part of: sequence
location: 11186..11815
location: region:11186-11815:1
so has part: feature:11186-11815:1:exon
subclass of: SO_0000010

80837165
type: Gene
SIO_000068: ncbigene

position:11186:1
position: 11186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11815:1
position: 11815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11186-11815:1:exon

K5658_RS23175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
gene: parA
locus tag: K5658_RS23175
old locus tag: MishRS11D_46190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798610.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MHVIAVLNQKGGSGKTTIATHLARALQLDGGDVLLVDSDPQGSARDWAAAHEEQPVPVVGIDRPIIDRSLKSIGRKDFIVIDGAPQIEELAVSAIKAANFVLIPVQPSPYDVWATSDLVDLVKARIEILDGGLKAAFVISRAIKGTRIGGEITAVLADYGLPVLASRVTQRVIYPTSAATGRTAFEQEPGGEAAQEIRGLVAELKGLLK
SIO_010081: K5658_RS23175
subclass of: SO_0000673
so part of: K5658_RS23175
location: 11186..11815
location: region:11186-11815:1
so has part: feature:11186-11815:1:exon

WP_221067513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11186-11815:1:exon

K5658_RS23180
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23180
old locus tag: MishRS11D_46200
so part of: sequence
location: 11844..12065
location: region:11844-12065:1
so has part: feature:11844-12065:1:exon
subclass of: SO_0000010

80837166
type: Gene
SIO_000068: ncbigene

position:11844:1
position: 11844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12065:1
position: 12065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11844-12065:1:exon

K5658_RS23180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23180
old locus tag: MishRS11D_46200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918372.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partition protein ParG
translation: MSKEVGGVGLRAGKPSAGAKRKELALEALTEKNKTVRVNFDLSEEEHTKLKIHAARARKTIADVLREFVAGIE
SIO_010081: K5658_RS23180
subclass of: SO_0000673
so part of: K5658_RS23180
location: 11844..12065
location: region:11844-12065:1
so has part: feature:11844-12065:1:exon

WP_221067514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11844-12065:1:exon

K5658_RS23185
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23185
old locus tag: MishRS11D_46220
so part of: sequence
location: complement(12812..13342)
location: region:12812-13342:-1
so has part: feature:12812-13342:-1:exon
subclass of: SO_0000010

80837167
type: Gene
SIO_000068: ncbigene

position:12812:-1
position: 12812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13342:-1
position: 13342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12812-13342:-1:exon

K5658_RS23185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23185
old locus tag: MishRS11D_46220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017097178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent hydrolase
translation: MKWVNHIAIAASAAAVWRPELIPVAVAGSIAPDWMESVPALVGGRKPAHRTVTHIVAYWALALAFSVLVWDFHGLVAAFALGGLSHVLCDSLTVMGVPLVPWSAQRSTFFGAPFKTGNMGEYVFTGVIVAACLALALLTRHWGGEGFAPFFFDYADLYQRGVIDANEWKENRFRWL
SIO_010081: K5658_RS23185
subclass of: SO_0000673
so part of: K5658_RS23185
location: complement(12812..13342)
location: region:12812-13342:-1
so has part: feature:12812-13342:-1:exon

WP_221067515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12812-13342:-1:exon

K5658_RS23190
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23190
old locus tag: MishRS11D_46230
so part of: sequence
location: complement(13339..13563)
location: region:13339-13563:-1
so has part: feature:13339-13563:-1:exon
subclass of: SO_0000010

80837168
type: Gene
SIO_000068: ncbigene

position:13339:-1
position: 13339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13563:-1
position: 13563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13339-13563:-1:exon

K5658_RS23190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23190
old locus tag: MishRS11D_46230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDISTPKTQALLNSDAPFWVRNALKSAMERAPVDALEDGQKLLDALAEWAAAKLQDENERFARMRPEPEAVAA
SIO_010081: K5658_RS23190
subclass of: SO_0000673
so part of: K5658_RS23190
location: complement(13339..13563)
location: region:13339-13563:-1
so has part: feature:13339-13563:-1:exon

WP_221067516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13339-13563:-1:exon

K5658_RS23195
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23195
old locus tag: MishRS11D_46240
so part of: sequence
location: complement(13560..14348)
location: region:13560-14348:-1
so has part: feature:13560-14348:-1:exon
subclass of: SO_0000010

80837169
type: Gene
SIO_000068: ncbigene

position:13560:-1
position: 13560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14348:-1
position: 14348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13560-14348:-1:exon

K5658_RS23195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23195
old locus tag: MishRS11D_46240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLAALSGPAQALDIHIPVPWDETPEPQQTPAKLETPPPASANPQREKAKDAPEIQPYLIPRFGGQRAAQDQGGADTDFHHIPPIKLSKQIDADSIFNLIIRCFPYQPQWHIDIKLVGGARYTENNTVSTFDTAGLARYYAGVVAEMPLYSADEIYRLEEQERKRRGEVAKQIAELLKSLSDRDRALRMVGIGESVEAREQYRNTIGVGSSEKQIGYLKDVAGAVGELDAANAAIVAARLALVGQCRNDVSDEVNHYLVEITQ
SIO_010081: K5658_RS23195
subclass of: SO_0000673
so part of: K5658_RS23195
location: complement(13560..14348)
location: region:13560-14348:-1
so has part: feature:13560-14348:-1:exon

WP_221067517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13560-14348:-1:exon

K5658_RS23200
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23200
old locus tag: MishRS11D_46250
so part of: sequence
location: complement(14435..14869)
location: region:14435-14869:-1
so has part: feature:14435-14869:-1:exon
subclass of: SO_0000010

80837170
type: Gene
SIO_000068: ncbigene

position:14435:-1
position: 14435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14869:-1
position: 14869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14435-14869:-1:exon

K5658_RS23200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23200
old locus tag: MishRS11D_46250
inference: COORDINATES: protein motif:HMM:NF023444.2
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GspH/FimT family pseudopilin
translation: MMRGITLSKLVATMAVAGIALFLAAPWIGDIAAAIRLAHGTDELLEAIAYARSEAMQQGTTIAICEGPGGWAAYTVADFEGNALRFGDGSALSVEGSAECAIFGSAGNLHTLPLAITLCDPGRHQGRKISVNFVGRAQVEAGPC
SIO_010081: K5658_RS23200
subclass of: SO_0000673
so part of: K5658_RS23200
location: complement(14435..14869)
location: region:14435-14869:-1
so has part: feature:14435-14869:-1:exon

WP_221067493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14435-14869:-1:exon

K5658_RS23205
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23205
old locus tag: MishRS11D_46260
so part of: sequence
location: complement(14866..16731)
location: region:14866-16731:-1
so has part: feature:14866-16731:-1:exon
subclass of: SO_0000010

80837171
type: Gene
SIO_000068: ncbigene

position:14866:-1
position: 14866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16731:-1
position: 16731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14866-16731:-1:exon

K5658_RS23205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23205
old locus tag: MishRS11D_46260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: collagen-like protein
translation: MSTRFLPALSLLPALAAADQSLTGTCPDIGTQAYTVNFTKGKSYTVEFITDGTASASLNGVYRSYGKWNFKAASTSAALNVVCAVAGSSHKINVLETTLGLAYIQTEPNAHVALSDASGDVATGDADASGIAALPVPKGTYHLRAFANDGGPVWNGGKPAESALAFSVGSSGGVGYLPLSARPVISKITVSGTSITLAGTGFGADRGYYDVGKGAALPRTWADTSITGTITAGASGCARVFAVQGGWSECKHFGAGAAPTIQAGAFTVATTGANGAPVLSWVGDQIAINGVASGPHLTGPRGATGPKGADGAPGPQGPAGPANALTIGTVATGAASAATLTGTAPNQILNLTLQRGPAGPAGPANALSIGTVTTGAAGSQAAASITGTAPAQTLNLTIPAGAPGQPGSGGGGGTPIPWISGIDRIAISKHFVIGSSNVIVSEWFAGGGGDNDLVIAQPYNPPYSGTVDAVVLYVGYCPGGAKINTGLLSINSNGTISSQYAAQGSESDIITDTYSTVAVQFDNPISVSSASWYFIVLSIDNHSCNIQWQFPNITNSPLGYIPTPPPYISAYQSLIPYPALAYLMPHGSQLLPLSAMNAVDVISGNAGLLFNTPFIALRYTP
SIO_010081: K5658_RS23205
subclass of: SO_0000673
so part of: K5658_RS23205
location: complement(14866..16731)
location: region:14866-16731:-1
so has part: feature:14866-16731:-1:exon

WP_221067494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14866-16731:-1:exon

K5658_RS23210
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23210
old locus tag: MishRS11D_46270
so part of: sequence
location: complement(16793..17707)
location: region:16793-17707:-1
so has part: feature:16793-17707:-1:exon
subclass of: SO_0000010

80837172
type: Gene
SIO_000068: ncbigene

position:16793:-1
position: 16793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17707:-1
position: 17707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16793-17707:-1:exon

K5658_RS23210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23210
old locus tag: MishRS11D_46270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRLLKTAALIAALSGISTANAVDIPYSWNDTLQGSSDPGADDTICGTYSLPTIKTGMLFLDIEADASPGDITVIVHRGTSTGTVAATLVSPVKKPVAIASVTPHFLEIKCKTSATAYSPGLVRAWWSGAGKNLYVNTNPGAHIQLYDAGQGSLVSEMDASNLSGLAKFPLQPGSYLVRATYNGAEAWAGSNGALKPRENASSVSISTSDKVVSVVLGDPPVIDSAAIDPATRKVLIQGTGFGDDPGYIENFSNGKLSRSTPSNTTALNWTDFAIYGTPGTLSTDRCVRVFSSIGGWSPTCVKY
SIO_010081: K5658_RS23210
subclass of: SO_0000673
so part of: K5658_RS23210
location: complement(16793..17707)
location: region:16793-17707:-1
so has part: feature:16793-17707:-1:exon

WP_221067495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16793-17707:-1:exon

K5658_RS23215
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23215
old locus tag: MishRS11D_46280
so part of: sequence
location: complement(17795..18454)
location: region:17795-18454:-1
so has part: feature:17795-18454:-1:exon
subclass of: SO_0000010

80837173
type: Gene
SIO_000068: ncbigene

position:17795:-1
position: 17795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18454:-1
position: 18454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17795-18454:-1:exon

K5658_RS23215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23215
old locus tag: MishRS11D_46280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVIRKTRKMGDVLNEQSISVRRPVLITGTHAAGKSRWLKRLYADAHRVWATRAKATPLYLVASNSLAEWVDGKHLELWWAGRAHGQAETRHWSKLKPFEKYRALPLYLQETGAVLFIDDAHAMTTNSKKGKVAQDCVRAAGVWVIAATDEGRLFPGLRKDVMGLDPQIFRLESDVAMDNTKYLIWSLAAFFMVIGLPGAAFAIAGAKVLVDSRKAAKQS
SIO_010081: K5658_RS23215
subclass of: SO_0000673
so part of: K5658_RS23215
location: complement(17795..18454)
location: region:17795-18454:-1
so has part: feature:17795-18454:-1:exon

WP_221067496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17795-18454:-1:exon

K5658_RS23220
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23220
old locus tag: MishRS11D_46290
so part of: sequence
location: 18681..19436
location: region:18681-19436:1
so has part: feature:18681-19436:1:exon
subclass of: SO_0000010

80837174
type: Gene
SIO_000068: ncbigene

position:18681:1
position: 18681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19436:1
position: 19436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18681-19436:1:exon

K5658_RS23220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23220
old locus tag: MishRS11D_46290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012592903.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MQNHEPTFYAYLRVSTDRQDVDNQRHGVIEYAKQTGFGALTFFEDTASGRKEWRDRDLGKLLGKARNGDILIVSEISRLARSTIQVLEALREAAEKGVTVHVAKNRMVMDGSLNARITATVLGMAAEIEREFISARTTEALARRKAAGLPVGRQKGSTNESKKLDKHADKIREYLELGVPKQKIMEKVDCCERTFYQWLYANGLGSYINSRPKNEKPAPAPAPAAVPLVPTRARRGGKPKATGTGPRSARA
SIO_010081: K5658_RS23220
subclass of: SO_0000673
so part of: K5658_RS23220
location: 18681..19436
location: region:18681-19436:1
so has part: feature:18681-19436:1:exon

WP_221067497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18681-19436:1:exon

K5658_RS23225
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23225
so part of: sequence
location: 19483..19698
location: region:19483-19698:1
so has part: feature:19483-19698:1:exon
subclass of: SO_0000010

80837175
type: Gene
SIO_000068: ncbigene

position:19483:1
position: 19483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19698:1
position: 19698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19483-19698:1:exon

K5658_RS23225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23225
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQHPADPLLIRSYALRIGICRLIDEGKISLERGIEVFEVEKRRAIMERSYQDSRKRESRPVPLDELEPQG
SIO_010081: K5658_RS23225
subclass of: SO_0000673
so part of: K5658_RS23225
location: 19483..19698
location: region:19483-19698:1
so has part: feature:19483-19698:1:exon

WP_221067498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19483-19698:1:exon

K5658_RS23230
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23230
old locus tag: MishRS11D_46310
so part of: sequence
location: 19703..19987
location: region:19703-19987:1
so has part: feature:19703-19987:1:exon
subclass of: SO_0000010

80837176
type: Gene
SIO_000068: ncbigene

position:19703:1
position: 19703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19987:1
position: 19987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19703-19987:1:exon

K5658_RS23230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23230
old locus tag: MishRS11D_46310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAVVALTDGAAVEPAPGPPMRRWYTPEIARALENRNSSERLKRWLLEALDQEPEEAIAEAQALIELLERYFERINAASEALGLDVEELLRGGV
SIO_010081: K5658_RS23230
subclass of: SO_0000673
so part of: K5658_RS23230
location: 19703..19987
location: region:19703-19987:1
so has part: feature:19703-19987:1:exon

WP_221067499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19703-19987:1:exon

K5658_RS23235
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23235
old locus tag: MishRS11D_46320
so part of: sequence
location: 19984..20190
location: region:19984-20190:1
so has part: feature:19984-20190:1:exon
subclass of: SO_0000010

80837177
type: Gene
SIO_000068: ncbigene

position:19984:1
position: 19984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20190:1
position: 20190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19984-20190:1:exon

K5658_RS23235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23235
old locus tag: MishRS11D_46320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVRTYHQRLAEALAGTEAMPYPAQEIERALLNHWPTEDGLRRRVCRMGRRARRLIEQLEPQTVLPFD
SIO_010081: K5658_RS23235
subclass of: SO_0000673
so part of: K5658_RS23235
location: 19984..20190
location: region:19984-20190:1
so has part: feature:19984-20190:1:exon

WP_221067500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19984-20190:1:exon

K5658_RS23240
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23240
old locus tag: MishRS11D_46330
so part of: sequence
location: 20375..20968
location: region:20375-20968:1
so has part: feature:20375-20968:1:exon
subclass of: SO_0000010

80837178
type: Gene
SIO_000068: ncbigene

position:20375:1
position: 20375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20968:1
position: 20968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20375-20968:1:exon

K5658_RS23240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23240
old locus tag: MishRS11D_46330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKNFDALLKKWLHHDRLLNDRERYYLVLQAGVFAILSYLFAGNKDDAVIVIIIAPVLLMAIWVIFVYYKTSQQIDYLYRNAFDKEIFNHIINLISDGNDKDKDKDKGIEKNEPLYYKWATRFEPIAEKYNGYTIDLSIFKKLEEKIENNFFGAKINFKYDENNNLDIMEYRIKLMRGIAVIETLVIVIATLIKIFI
SIO_010081: K5658_RS23240
subclass of: SO_0000673
so part of: K5658_RS23240
location: 20375..20968
location: region:20375-20968:1
so has part: feature:20375-20968:1:exon

WP_221067501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20375-20968:1:exon

K5658_RS23245
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23245
old locus tag: MishRS11D_46340
so part of: sequence
location: complement(21408..21731)
location: region:21408-21731:-1
so has part: feature:21408-21731:-1:exon
subclass of: SO_0000010

80837179
type: Gene
SIO_000068: ncbigene

position:21408:-1
position: 21408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21731:-1
position: 21731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21408-21731:-1:exon

K5658_RS23245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23245
old locus tag: MishRS11D_46340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTDHINGQEAEVCVIAADGTELGEALRPDERALLDRIDAALKADAGFRAACPGARLVRVDSNRGLGDREEGRFYLRYQHQGGGITELWGNAADGVGVDLKLGVVGA
SIO_010081: K5658_RS23245
subclass of: SO_0000673
so part of: K5658_RS23245
location: complement(21408..21731)
location: region:21408-21731:-1
so has part: feature:21408-21731:-1:exon

WP_221067502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21408-21731:-1:exon

K5658_RS23250
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23250
old locus tag: MishRS11D_46350
so part of: sequence
location: complement(21749..22447)
location: region:21749-22447:-1
so has part: feature:21749-22447:-1:exon
subclass of: SO_0000010

80837180
type: Gene
SIO_000068: ncbigene

position:21749:-1
position: 21749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22447:-1
position: 22447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21749-22447:-1:exon

K5658_RS23250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23250
old locus tag: MishRS11D_46350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRKLPAQVAGAVLALAVSAPMAVLAAPPLVPDPAKTPGDVLTTDKATICTPGYTQTVRDVPESLKNQVYASYGILSRQPKEYEVDHLVSLELGGSNSLRNLWPQSYETRPLNAHVKDTLENKMHALICKGGLDIRQAQQEIAADWVAAYAKYVGPVPGGVPTAHPVEAPKPGATEAQPDASGNCPASAPVKVSSSGIYHLPGGSFYRRTQAKGCYATPEAAQAAGFRASQR
SIO_010081: K5658_RS23250
subclass of: SO_0000673
so part of: K5658_RS23250
location: complement(21749..22447)
location: region:21749-22447:-1
so has part: feature:21749-22447:-1:exon

WP_221067503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21749-22447:-1:exon

K5658_RS23255
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23255
old locus tag: MishRS11D_46390
so part of: sequence
location: 23472..24041
location: region:23472-24041:1
so has part: feature:23472-24041:1:exon
subclass of: SO_0000010

80837181
type: Gene
SIO_000068: ncbigene

position:23472:1
position: 23472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24041:1
position: 24041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23472-24041:1:exon

K5658_RS23255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23255
old locus tag: MishRS11D_46390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013028104.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGGVVAVAGSRALPPAGLALVQRVARALVASGRSLAVGCASGADAAVLGAVPASAVSVFAAFGPGGVGSCPVSAVSAVAAVAAAGGSVVWWAGGPASVPLAARLAARSAAVVGAASSGCVVFFGSPCSRGSLLAASLAAGRSLPVVAFPVGFPGSALPSLGAGSWVPCSRGGVWASAWSWVPAQAGLF
SIO_010081: K5658_RS23255
subclass of: SO_0000673
so part of: K5658_RS23255
location: 23472..24041
location: region:23472-24041:1
so has part: feature:23472-24041:1:exon

WP_246628712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23472-24041:1:exon

K5658_RS23260
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23260
old locus tag: MishRS11D_46400
so part of: sequence
location: 24466..25287
location: region:24466-25287:1
so has part: feature:24466-25287:1:exon
subclass of: SO_0000010

80837182
type: Gene
SIO_000068: ncbigene

position:24466:1
position: 24466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25287:1
position: 25287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24466-25287:1:exon

K5658_RS23260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23260
old locus tag: MishRS11D_46400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011330185.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF932 domain-containing protein
translation: MNAFAGLGYNNNHVRALDDAALRRLAPSVFAESAASDRSHRYTFIPTSAVIQALRNEGFYPVAAMESRARIEEKKGFTKHLVRLRRHDGFSHVGEVLPEICLMNSHDGTTSYQISAGLFRLVCSNGLIVSDSEIETIRARHSGNIVDDVIEGTYHVIERAPEVAGKVEQFRGLVISEPMQNAFAKAALELRYEPEEAPIQPAQLNRPRRSEDRGDDIWRTFNRVQENMIQGGIRGKNKNGGRMSTRAVNSVGENVRLNKALWTLAEEMRRLVA
SIO_010081: K5658_RS23260
subclass of: SO_0000673
so part of: K5658_RS23260
location: 24466..25287
location: region:24466-25287:1
so has part: feature:24466-25287:1:exon

WP_221067504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24466-25287:1:exon

K5658_RS23850
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23850
old locus tag: MishRS11D_46410
so part of: sequence
location: 25560..26789
location: region:25560-26789:1
so has part: feature:25560-26789:1:exon
subclass of: SO_0000010

80837257
type: Gene
SIO_000068: ncbigene

position:25560:1
position: 25560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26789:1
position: 26789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25560-26789:1:exon

K5658_RS23850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23850
old locus tag: MishRS11D_46410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013028099.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEGTDLSRYELATVREIKDEARDAQNEASAQGGNPERSESTAIDTAATVMVDGVGLVDQSTGEIIMSVYKTEDNTPEIIGAKAEAPQASNVVAIYEAPQPVAASPLDLPVEVFRAGLDRRRENRTALMRWVREALVENVDFGSITVKGRKSKPSLWKPGAEKICGMLGVSVAFPTLADYEQAALRGAELKAIIIRCEIRDSIGRIIADGVGARNLAQDNGDLNKCFKMAEKSAHIDATLRLAGLSEVFTQDIEDMPGMQDKPRQEQRPAHQPEPPKEQRITADQALHLQATIKAYGLDMGKAMEWVRKACKVDGIHELTPNKAEKVLGKLAHFAVEQGTANPDTLKAKAEDYRRSAEIQRQNAQYADRGYNDEMRQAEESAQKANHYDRMAAQMAAALEPVEPVAQAA
SIO_010081: K5658_RS23850
subclass of: SO_0000673
so part of: K5658_RS23850
location: 25560..26789
location: region:25560-26789:1
so has part: feature:25560-26789:1:exon

WP_246628713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25560-26789:1:exon

K5658_RS23270
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23270
old locus tag: MishRS11D_46420
so part of: sequence
location: 26923..27162
location: region:26923-27162:1
so has part: feature:26923-27162:1:exon
subclass of: SO_0000010

80837183
type: Gene
SIO_000068: ncbigene

position:26923:1
position: 26923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27162:1
position: 27162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26923-27162:1:exon

K5658_RS23270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23270
old locus tag: MishRS11D_46420
inference: COORDINATES: protein motif:HMM:NF024949.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MANEIGRKIKQRREQLGLTQAQVAARGGASQAFIAQVECGSRKNVTVDTLRLVANGLGCKIADLLPDEDKHPAPESRAA
SIO_010081: K5658_RS23270
subclass of: SO_0000673
so part of: K5658_RS23270
location: 26923..27162
location: region:26923-27162:1
so has part: feature:26923-27162:1:exon

WP_221067505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26923-27162:1:exon

K5658_RS24060
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS24060
old locus tag: MishRS11D_46430
so part of: sequence
location: complement(27387..27638)
location: region:27387-27638:-1
so has part: feature:27387-27638:-1:exon
subclass of: SO_0000010

80837298
type: Gene
SIO_000068: ncbigene

position:27387:-1
position: 27387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27638:-1
position: 27638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27387-27638:-1:exon

K5658_RS24060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS24060
old locus tag: MishRS11D_46430
inference: COORDINATES: protein motif:HMM:NF024949.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKSIYTRETAIFCNILRRYRENAQLTQCQLAEKLHMEQPQIAKIELGQRRLDMIEAWRWAEACGMSIVELAEELERRINLRGP
SIO_010081: K5658_RS24060
subclass of: SO_0000673
so part of: K5658_RS24060
location: complement(27387..27638)
location: region:27387-27638:-1
so has part: feature:27387-27638:-1:exon

WP_221067506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27387-27638:-1:exon