Methylomagnum ishizawai strain RS11D-Pr plasmid pRS11DPr5, complete sequence.
type: Entry
definition: Methylomagnum ishizawai strain RS11D-Pr plasmid pRS11DPr5, complete sequence.
sequence version: NZ_AP019788.1
sequence date: 2023-05-19
sequence: sequence
division: CON
label: NZ_AP019788.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00172935
keyword: RefSeq
source: Methylomagnum ishizawai
organism: Methylomagnum ishizawai
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomagnum.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP019788.1.\nAnnotated at DFAST https://dfast.nig.ac.jp/\n\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.7\nGenome Coverage :: 725x\nSequencing Technology :: Illumina NextSeq, GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/07/2023 06:14:59\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,693\nCDSs (total) :: 4,634\nGenes (coding) :: 4,584\nCDSs (with protein) :: 4,584\nGenes (RNA) :: 59\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 4\nPseudo Genes (total) :: 50\nCDSs (without protein) :: 50\nPseudo Genes (ambiguous residues) :: 0 of 50\nPseudo Genes (frameshifted) :: 17 of 50\nPseudo Genes (incomplete) :: 34 of 50\nPseudo Genes (internal stop) :: 3 of 50\nPseudo Genes (multiple problems) :: 4 of 50\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 35221
topology: circular
so has quality: SO_0000988
location: 1..35221
location: region:1-35221:1
RO_0002162: 1760988

NZ_AP019788
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00172935
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Methylomagnum ishizawai strain RS11D-Pr
author: Asakawa, S.
author: Khalifa, A.
author: Lee, C.G.
author: Ogiso, T.
author: Ueno, C.
author: Dianou, D.
journal: Unpublished

2
title: Direct Submission
author: Asakawa, S.
author: Watanabe, T.
journal: Submitted (28-JUN-2019) Contact:Susumu Asakawa Nagoya University, Graduate School of Bioagricultural Sciences; Chikusa, Furocho 1, Nagoya, Aichi 464-8601, Japan URL :https://www.agr.nagoya-u.ac.jp/%7Esoil/ Soil_Biology_and_Chemistry/toppupeji.html

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35221:1
position: 35221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-35221:1:source
so part of: sequence
organism: Methylomagnum ishizawai
mol type: genomic DNA
strain: RS11D-Pr
isolation source: rice rhizosphere
culture collection: JCM:18894
type material: type strain of Methylomagnum ishizawai
plasmid: pRS11DPr5
country: Japan:Aichi, Anjo, Anjo Agricultural and Extension Centre
lat lon: 34.97 N 137.07 E
collection date: 2003-08-11

1760988
type: Taxonomy
SIO_000068: taxonomy

K5658_RS22935
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22935
so part of: sequence
location: complement(join(33426..35221,1..505))
location: region:1-35221:-1
so has part: feature:1-505:-1:exon
so has part: feature:33426-35221:-1:exon
subclass of: SO_0000010

80837119
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35221:-1
position: 35221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-505:-1:exon

position:505:-1
position: 505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33426-35221:-1:exon

position:33426:-1
position: 33426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

K5658_RS22935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22935
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRLRFFQKPTLVSLPILLALAVLLVLLRWRWHFLFPPQAPRFPPEQRETRALWHEARQLAATARLSLHPGPWAAETARCLCGDAGLDPEGDLAEALETLAGELLEASGLYGFPPDAALDYALSDLAEGLALREELRDKILLLREAQRHEATVRDYVADILAGLLASVEAPPSERGQGAFRVPLLSCVEDAPALVEGIVGRTLDDAIRHTSLFRGLRDRLMDNLDAVSDELTPREYARKKKLDPAETLETYLKGTPFLPAFAASLPFSIPQSARFEHTHVVAGSGHGKTQTLQHLILADLDRARRERFGFALIDSQGDLIARLTRLSLFDPEGGELAGRLTIIDPNDLKHPAGLNLFDYDLDRFQGFSEVEREKIFHGVLELYAYIFSSLLGAELTQKQGVVFTNLARAMLVMPDPTIYTFYDFVEDGTKFKPYIEKLDGIPRRFFETQFFTNAYSQTRQQIVTRLLGVLGNPAFERMFAHPKNNVDMFGAMQAGQVVVVNTAKDLLKSEGSSILGRFFVALIVQATLARAAVPERERTPYHVYIDEAQEYFDRKTDELLNQGRKFRVGVTLAHQHLNQLDTELRATLKASTSVKLVGGVNHADALALAQEMNCSAEFVQSMRKRERQGHTEFACYVRHHTPQPVRLAVPLGAMERLPRMDAEAHARLIEDNRARVARRPELPPPERPEEASGGDGATVDVNIGTEAESQARPATEAGPEPTGTTARPRRYSPKTPRSGPKPPPQEPLRGEDGHIRPKDDLDFYVS
SIO_010081: K5658_RS22935
subclass of: SO_0000673
so part of: K5658_RS22935
location: complement(join(33426..35221,1..505))
location: region:1-35221:-1
so has part: feature:1-505:-1:exon
so has part: feature:33426-35221:-1:exon

WP_221067469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33426-35221:-1:exon

K5658_RS23840
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23840
old locus tag: MishRS11D_45710
so part of: sequence
location: 561..1751
location: region:561-1751:1
so has part: feature:561-1751:1:exon
subclass of: SO_0000010

80837255
type: Gene
SIO_000068: ncbigene

position:561:1
position: 561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1751:1
position: 1751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561-1751:1:exon

K5658_RS23840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23840
old locus tag: MishRS11D_45710
inference: COORDINATES: protein motif:HMM:NF013752.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MPRPPELYQWNREIAIHFPGLSKPMVMGLALWSLGMVVVGACSLSALTDWWSCRLGQKGDAVRERLRYVYRGKEAKAGKERRELDVEACRAPWLGWVLEGWDGNQLAVALDATSLGQRFVVLAVSVLYRGCAVPVAWKVLRAERKHPWKPEWLALLRHFKDVAPASWTVLVLADRGLYAKWLFEGIQALGWHPMLRVNSGGTFRPRGWRHWRPFTRLVPKVGDRWQGRGTAFGGKRTRLDCTLLAYWGEGHKDPWLVLTDLPPEAANACWYGLRGWIEQSFKKIKGGGWQWQNTRMDDPERAERLWLAIAIATWWLLSVGGEAEAGMAAATFPAIPGSPRQQAHRWRLVGIFRHGRSLILAALFERRALPVGKARPEPWPSVPIPGATVAILTGAV
SIO_010081: K5658_RS23840
subclass of: SO_0000673
so part of: K5658_RS23840
location: 561..1751
location: region:561-1751:1
so has part: feature:561-1751:1:exon

WP_246628709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561-1751:1:exon

K5658_RS22945
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22945
old locus tag: MishRS11D_45720
so part of: sequence
location: complement(1796..2236)
location: region:1796-2236:-1
so has part: feature:1796-2236:-1:exon
subclass of: SO_0000010

80837120
type: Gene
SIO_000068: ncbigene

position:1796:-1
position: 1796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236:-1
position: 2236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1796-2236:-1:exon

K5658_RS22945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22945
old locus tag: MishRS11D_45720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLLIRRNQKTGLMGGAKYTLYVRAQLSDEERNLVKKNNLAGELLVYYDRDADKANLAGSLKEAGGLAGALVRKMRDTALTVAKLIEGAEITCANVGELMGVERETREAALMLKNYLDVAATFGGEEVLDMDKLLAEANARDARRA
SIO_010081: K5658_RS22945
subclass of: SO_0000673
so part of: K5658_RS22945
location: complement(1796..2236)
location: region:1796-2236:-1
so has part: feature:1796-2236:-1:exon

WP_221067470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1796-2236:-1:exon

K5658_RS22950
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22950
old locus tag: MishRS11D_45730
so part of: sequence
location: complement(2517..3557)
location: region:2517-3557:-1
so has part: feature:2517-3557:-1:exon
subclass of: SO_0000010

80837121
type: Gene
SIO_000068: ncbigene

position:2517:-1
position: 2517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3557:-1
position: 3557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2517-3557:-1:exon

K5658_RS22950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22950
old locus tag: MishRS11D_45730
inference: COORDINATES: protein motif:HMM:NF025186.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication-relaxation family protein
translation: MNPSPTKRLTALQIDMLAAVLRYRLMTTAQIHRLLYSRREGAGGETSVAKTMRKLHDSGFVKRDWLAVKPTERSILGRPNAIWSLEAPHLKRLAGHLAETGRADLLEELAPDAKAFREGSALAENTLRHELAITDFYMALEMRADEAGRTPPTWLRTSPAHLDVSRSVIVTKTDKKTGRQTQAKLPLNPDGLHAVGVPGRGYAFFLLEMDMNTETALEKLTHKFLAYYAYYEQGGFGREIAAPFAQRHALPVARPEAAPFRVLFVAPTAKRRNDLLLKSRVLPTSNLFQFATMADVLADPYGPVWLSKDSFKDHLDEYNLRTNAEGPVTLRAWAHGVLDSLPKHAL
SIO_010081: K5658_RS22950
subclass of: SO_0000673
so part of: K5658_RS22950
location: complement(2517..3557)
location: region:2517-3557:-1
so has part: feature:2517-3557:-1:exon

WP_221067471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2517-3557:-1:exon

K5658_RS22955
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22955
old locus tag: MishRS11D_45740
so part of: sequence
location: 4611..5891
location: region:4611-5891:1
so has part: feature:4611-5891:1:exon
subclass of: SO_0000010

80837122
type: Gene
SIO_000068: ncbigene

position:4611:1
position: 4611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5891:1
position: 5891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4611-5891:1:exon

K5658_RS22955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22955
old locus tag: MishRS11D_45740
inference: COORDINATES: protein motif:HMM:NF013235.2
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MSEKTLVVQHNAVIEARYRLTVEEQRLIKTLVSHIQPNDEDFKVYEIKIADLARLLDISDTSYYDRVKKVTRRILTNVLCFYDEKGNEVQTNWLSSAKYHKGKGVVALRFDPELKPYLLQLKRLFTSYELGNILRLKGMYSIRIYELLKQYERIGRREFELEFLKKTLGIDAEYPQYRDFKKFVLVPAEKEISEKTDIKYATVEKKRGRKVIALVFEIEPRKSSSPDEKPVKPDKKPQEIQAGHVVSQMMSLGVARKVAEELVEEYGEEKVRYAIEYTQGQVKEGKVKSPGGFLVEAVKNGYRDGKKEERKRKEDSAKAEATETARRKAWERAKEQWGAWRNERTTARLDAMDAETLELEKEAWRASLADKPALLNMLKPGSDREGLFFHQYMVGRTGGLGLAEWARAVGFDLSPFEDLARQDGKL
SIO_010081: K5658_RS22955
subclass of: SO_0000673
so part of: K5658_RS22955
location: 4611..5891
location: region:4611-5891:1
so has part: feature:4611-5891:1:exon

WP_221067472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4611-5891:1:exon

K5658_RS22960
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22960
old locus tag: MishRS11D_45750
so part of: sequence
location: complement(6117..6503)
location: region:6117-6503:-1
so has part: feature:6117-6503:-1:exon
subclass of: SO_0000010

80837123
type: Gene
SIO_000068: ncbigene

position:6117:-1
position: 6117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6503:-1
position: 6503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6117-6503:-1:exon

K5658_RS22960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22960
old locus tag: MishRS11D_45750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKEYVDKRFDEALAAIQEMITIMDSRLMKLETGLQGRMTDFQENMENMRQALRDEIHTSENALRREIQHGQGKAMEEMREQRDILLRLEHFLMDKQEVQGDLIQETRQRVERIEAKVGLPHSLSVAL
SIO_010081: K5658_RS22960
subclass of: SO_0000673
so part of: K5658_RS22960
location: complement(6117..6503)
location: region:6117-6503:-1
so has part: feature:6117-6503:-1:exon

WP_221067473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6117-6503:-1:exon

K5658_RS22965
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22965
old locus tag: MishRS11D_45760
so part of: sequence
location: 6637..7365
location: region:6637-7365:1
so has part: feature:6637-7365:1:exon
subclass of: SO_0000010

80837124
type: Gene
SIO_000068: ncbigene

position:6637:1
position: 6637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7365:1
position: 7365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6637-7365:1:exon

K5658_RS22965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22965
old locus tag: MishRS11D_45760
inference: COORDINATES: protein motif:HMM:NF013235.2
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MPVPELEKRLVVQHNRLIEAVYRLPVEEQLLIKTLVSRVGPKDMDFRPHTLRVADLAGLMGMTGGDAHAAVEWATKRLAGRVVALRDGDGKELQVSWLSSALYDGDEGSVSLCFDPRLKPFLLRLKNNFTVYELGNVVRLKRTYSIRLYELLKQYQPVGRRRFTLDRLREMLMLRDGEYGTYNNFKKWVLVPSREELGRKTDIDFTWNEERERGRVVAVEFVIKAQGRPETQPERAKIQPMA
SIO_010081: K5658_RS22965
subclass of: SO_0000673
so part of: K5658_RS22965
location: 6637..7365
location: region:6637-7365:1
so has part: feature:6637-7365:1:exon

WP_221067474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6637-7365:1:exon

K5658_RS22970
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22970
old locus tag: MishRS11D_45770
so part of: sequence
location: complement(7424..7771)
location: region:7424-7771:-1
so has part: feature:7424-7771:-1:exon
subclass of: SO_0000010

80837125
type: Gene
SIO_000068: ncbigene

position:7424:-1
position: 7424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7771:-1
position: 7771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7424-7771:-1:exon

K5658_RS22970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22970
old locus tag: MishRS11D_45770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METKTTPKKRSLGTPPTDLRDNLKEPEIAPTGHVVTHKVDKRTLRRAGRDYQLNAGVSLEFRNRFNEVAARDHLQNWELIMAGTALYERLTKEEREAIIEEIRRKNPPAYRILSR
SIO_010081: K5658_RS22970
subclass of: SO_0000673
so part of: K5658_RS22970
location: complement(7424..7771)
location: region:7424-7771:-1
so has part: feature:7424-7771:-1:exon

WP_221067475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7424-7771:-1:exon

K5658_RS22975
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22975
old locus tag: MishRS11D_45780
so part of: sequence
location: complement(7838..8485)
location: region:7838-8485:-1
so has part: feature:7838-8485:-1:exon
subclass of: SO_0000010

80837126
type: Gene
SIO_000068: ncbigene

position:7838:-1
position: 7838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8485:-1
position: 8485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7838-8485:-1:exon

K5658_RS22975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22975
old locus tag: MishRS11D_45780
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: division plane positioning ATPase MipZ
translation: MPYILACVSQKGGVGKSTVARGAAVALTRQGYKVRLADLDTAQGTSVDWYRRRLNNGGDPLESVEYYRTAKEALEKSRDVDVLVVDAQGRSSESTLALAHAAHVLIQPATGSLDDLDPAIRLYTELRNRQIQSSKLLFALLKTHNENEEAAAWDYIGQTGFPCLKNTLRSRVGYKNAQNAGLSIVETFYPALNEQADAFLDELFLYIKKLYIKDM
SIO_010081: K5658_RS22975
subclass of: SO_0000673
so part of: K5658_RS22975
location: complement(7838..8485)
location: region:7838-8485:-1
so has part: feature:7838-8485:-1:exon

WP_221067476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7838-8485:-1:exon

K5658_RS22980
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22980
so part of: sequence
location: complement(8901..9158)
location: region:8901-9158:-1
so has part: feature:8901-9158:-1:exon
subclass of: SO_0000010

80837127
type: Gene
SIO_000068: ncbigene

position:8901:-1
position: 8901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9158:-1
position: 9158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8901-9158:-1:exon

K5658_RS22980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAVKVDMEALKMDVTTVKREIAGLKLEFVEAMPEIHETRTAMLRIEHVLQDKQEAHGDELEGVRQRIERIEDSLRLPHTLSTAA
SIO_010081: K5658_RS22980
subclass of: SO_0000673
so part of: K5658_RS22980
location: complement(8901..9158)
location: region:8901-9158:-1
so has part: feature:8901-9158:-1:exon

WP_221067477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8901-9158:-1:exon

K5658_RS22985
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22985
so part of: sequence
location: 9159..9419
location: region:9159-9419:1
so has part: feature:9159-9419:1:exon
subclass of: SO_0000010

80837128
type: Gene
SIO_000068: ncbigene

position:9159:1
position: 9159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9419:1
position: 9419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9159-9419:1:exon

K5658_RS22985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFYDAQAFVYQINLADEVLKAVRYHFGQRPYFLFDGFPYRSSDSFQNILIHDDIKGFISLLYHTEYNRILLAAAPCLRRLPHAWL
SIO_010081: K5658_RS22985
subclass of: SO_0000673
so part of: K5658_RS22985
location: 9159..9419
location: region:9159-9419:1
so has part: feature:9159-9419:1:exon

WP_221067478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9159-9419:1:exon

K5658_RS22990
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22990
old locus tag: MishRS11D_45800
so part of: sequence
location: complement(9493..9648)
location: region:9493-9648:-1
so has part: feature:9493-9648:-1:exon
subclass of: SO_0000010

80837129
type: Gene
SIO_000068: ncbigene

position:9493:-1
position: 9493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9648:-1
position: 9648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9493-9648:-1:exon

K5658_RS22990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22990
old locus tag: MishRS11D_45800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELTLPEDLALFVMERAKEEGYADPGGYVLALIMADLKRRDEQRLEATERA
SIO_010081: K5658_RS22990
subclass of: SO_0000673
so part of: K5658_RS22990
location: complement(9493..9648)
location: region:9493-9648:-1
so has part: feature:9493-9648:-1:exon

WP_221067479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9493-9648:-1:exon

K5658_RS22995
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS22995
old locus tag: MishRS11D_45810
so part of: sequence
location: complement(9705..10139)
location: region:9705-10139:-1
so has part: feature:9705-10139:-1:exon
subclass of: SO_0000010

80837130
type: Gene
SIO_000068: ncbigene

position:9705:-1
position: 9705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10139:-1
position: 10139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9705-10139:-1:exon

K5658_RS22995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS22995
old locus tag: MishRS11D_45810
inference: COORDINATES: protein motif:HMM:TIGR00305.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative toxin-antitoxin system toxin component, PIN family
translation: MRNAKHPDRLRAVLDTNVLVSAFQFPKGSIAGAWWALKEGRYVLVTSPTILSKLAEILRRRFGWNDNDRKALLKLVSRNAEIFQPKEIPEAVPNDPDDNHIVACAREGHADLIVSGDRHLLDLGEYEGIPIIRPADFLRTVGRP
SIO_010081: K5658_RS22995
subclass of: SO_0000673
so part of: K5658_RS22995
location: complement(9705..10139)
location: region:9705-10139:-1
so has part: feature:9705-10139:-1:exon

WP_221067480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9705-10139:-1:exon

K5658_RS23000
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23000
old locus tag: MishRS11D_45820
so part of: sequence
location: complement(10096..10473)
location: region:10096-10473:-1
so has part: feature:10096-10473:-1:exon
subclass of: SO_0000010

80837131
type: Gene
SIO_000068: ncbigene

position:10096:-1
position: 10096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10473:-1
position: 10473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10096-10473:-1:exon

K5658_RS23000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23000
old locus tag: MishRS11D_45820
inference: COORDINATES: protein motif:HMM:NF013561.2
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MSRVSKNLGFTVPPAMAEEFEQLAKAEQSTKSELFRRMVRLYKTYRNPIGQRTDNAEGWVERLILEAQEEERRNPMTAEEFAAETERLMDYGAERSRALGIRSEEELNEMLYAERETSRQATRRS
SIO_010081: K5658_RS23000
subclass of: SO_0000673
so part of: K5658_RS23000
location: complement(10096..10473)
location: region:10096-10473:-1
so has part: feature:10096-10473:-1:exon

WP_221067481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10096-10473:-1:exon

K5658_RS23005
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23005
old locus tag: MishRS11D_45830
so part of: sequence
location: complement(10562..10774)
location: region:10562-10774:-1
so has part: feature:10562-10774:-1:exon
subclass of: SO_0000010

80837132
type: Gene
SIO_000068: ncbigene

position:10562:-1
position: 10562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10774:-1
position: 10774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10562-10774:-1:exon

K5658_RS23005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23005
old locus tag: MishRS11D_45830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPETELRRYAVVLLDATRGRQWRDECDTEGEAQDILDRERHRASGYLVFDRESREIVKSRNLLAQDHGTD
SIO_010081: K5658_RS23005
subclass of: SO_0000673
so part of: K5658_RS23005
location: complement(10562..10774)
location: region:10562-10774:-1
so has part: feature:10562-10774:-1:exon

WP_221067482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10562-10774:-1:exon

K5658_RS23010
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23010
old locus tag: MishRS11D_45840
so part of: sequence
location: complement(10867..11211)
location: region:10867-11211:-1
so has part: feature:10867-11211:-1:exon
subclass of: SO_0000010

80837133
type: Gene
SIO_000068: ncbigene

position:10867:-1
position: 10867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11211:-1
position: 11211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10867-11211:-1:exon

K5658_RS23010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23010
old locus tag: MishRS11D_45840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004174001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTETPKDREPDGFLIPKPPLFQPGQVVATPGALAECPMEHLFECLVRHLGGDWGHVCPEDAKSNDAALKGGNRILSAYPIDPAQPCKGYGDNCLWVITEWDRSVTTFLLPDEY
SIO_010081: K5658_RS23010
subclass of: SO_0000673
so part of: K5658_RS23010
location: complement(10867..11211)
location: region:10867-11211:-1
so has part: feature:10867-11211:-1:exon

WP_246628710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10867-11211:-1:exon

K5658_RS23015
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23015
old locus tag: MishRS11D_45850
so part of: sequence
location: 11711..13222
location: region:11711-13222:1
so has part: feature:11711-13222:1:exon
subclass of: SO_0000010

80837134
type: Gene
SIO_000068: ncbigene

position:11711:1
position: 11711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13222:1
position: 13222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11711-13222:1:exon

K5658_RS23015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23015
old locus tag: MishRS11D_45850
inference: COORDINATES: protein motif:HMM:NF014474.2
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase
translation: MKFPSVATLNFVNMLDELTPIKEQLVEALVSLPDTVTLPMEGALTRINLTKETQAEVSHLTHYWEFILDNYDTSVIALVGMVNAGKSAIGNLLLHCSESSVFQEAPIRETSEPSIARLDEKVILVDLPGLGSVLADEDDAVVKSYLRRANLLLIVISVDSPITKHLFEFLKTEISSTYLAQRIIFVLNKIDIWDNLPELHRKKELSRYVEFLTNGQPSLGFCGINALFDYEVPIMPISVKHARNNHSCQDIESLQNSIISLLCDSKNSTCIQAKEQLQISFSKHVYIANGYSGLQETLQKAEEQVEWVKTKLIEYVDTELSAFYTSIVELDKACWVAMEHLPKPDWFEKTFETSGLSSKKQKLRETREYYSEKMKEVFDRFNKNIALTTKNILIAAFGCASEIAIPAPSKTHEILDGLAYINWDIQDDIYFLDKSVSSSRINERTNQKLQDLEKEIGVLLDNYAIFDAITYSAYNKFSEEIKTLESLRNFMQGMSNIYTSLFS
SIO_010081: K5658_RS23015
subclass of: SO_0000673
so part of: K5658_RS23015
location: 11711..13222
location: region:11711-13222:1
so has part: feature:11711-13222:1:exon

WP_221067483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11711-13222:1:exon

K5658_RS23020
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23020
old locus tag: MishRS11D_45860
so part of: sequence
location: 13251..15188
location: region:13251-15188:1
so has part: feature:13251-15188:1:exon
subclass of: SO_0000010

80837135
type: Gene
SIO_000068: ncbigene

position:13251:1
position: 13251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15188:1
position: 15188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13251-15188:1:exon

K5658_RS23020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23020
old locus tag: MishRS11D_45860
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: GTPase domain-containing protein
translation: MSTQKTEYKKFTAEIHSGTLLDDFMPQIMDDLEKRYKPINDMKIDYCDVLSKHAINIDKFNGFEKISEALSQSVEDINNIFVDIDERMKYFTIVFFGGVSAGKTSMICDLANVNPHHLSEIISSNPNFNPAQDRISIGPNVATINLYEILIEKSCIRLVDVPGIGGVVHDDDSLAPFVNMADCIMLLIQAGNDIMKSDEDFLYDHVAAFSKRDTSNAEFKSEERTDKRVLVALNKWKMAYGDLPPAKADKIFEQKSEWILHANGLKANDKFSGIAGYFHKPPIIARAETSYRDDETGDPLPAWFGENAKTDLSEVINALHEILKDDGSDFRLNRPRQVLQKESNKLIGYIAQEKAATSLEELGKELESLGVKSTFTTNQINDQLIERLNRFEQTVTFFLASRIKPAIHSWQPKVGFFDGLTGIFNKKGLQESLKKEWSNELRNLISSRIDVQEFANLIKQETDAFKKLVETSYQINFLSNPDLLKRIPGLQQSSSGSSSSEKEGIFKAIERELDEAVKKIQMGILDDIINLVSWDAILAILVGAILSPVGSFLLLAYRRWKRGESKGQEAKREIDYAVDKIAADVSSEIKQKIMLRLQKGVEDIHVAISNVLKQEKETINEPLILMDQIIADIREFQIKLQSIGI
SIO_010081: K5658_RS23020
subclass of: SO_0000673
so part of: K5658_RS23020
location: 13251..15188
location: region:13251-15188:1
so has part: feature:13251-15188:1:exon

WP_221067484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13251-15188:1:exon

K5658_RS23025
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23025
old locus tag: MishRS11D_45870
so part of: sequence
location: 15527..15883
location: region:15527-15883:1
so has part: feature:15527-15883:1:exon
subclass of: SO_0000010

80837136
type: Gene
SIO_000068: ncbigene

position:15527:1
position: 15527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15883:1
position: 15883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15527-15883:1:exon

K5658_RS23025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23025
old locus tag: MishRS11D_45870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIDKVIEILDKHSEVMESYVLLREIKLFLNVDHEHFHPEIRIKIYESSALRVPYHFSVSHHVKTPTQAGPYMPSKTWAESEEEAIRQAISTTTSYIKSAIAAGHEPSESWLIPDEDF
SIO_010081: K5658_RS23025
subclass of: SO_0000673
so part of: K5658_RS23025
location: 15527..15883
location: region:15527-15883:1
so has part: feature:15527-15883:1:exon

WP_221067485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15527-15883:1:exon

K5658_RS23030
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23030
old locus tag: MishRS11D_45880
so part of: sequence
location: 16081..16758
location: region:16081-16758:1
so has part: feature:16081-16758:1:exon
subclass of: SO_0000010

80837137
type: Gene
SIO_000068: ncbigene

position:16081:1
position: 16081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16758:1
position: 16758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16081-16758:1:exon

K5658_RS23030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23030
old locus tag: MishRS11D_45880
inference: COORDINATES: protein motif:HMM:NF025056.2
GO function: GO:0003953 - NAD+ nucleosidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toll/interleukin-1 receptor domain-containing protein
translation: MINETDATWGVFISYSRMDRNIVAPITDLMRITGAKVFRDEDSILPGKKWKIIITESLNSARTVVVFWCGHSAQSDAVKFEYKTAIELNKDVVPILLDETVLSDELREYQWIDFRSFTTLRENHCNVLSIGDAASAVGAGAVAGLSAGTAAGIGIAAGAAVVIAAAPVVLPIALIGGLVGAGIALLKKDSNKQAPLEPSITYPKLTKDEEDKIIAVLTKRILSFA
SIO_010081: K5658_RS23030
subclass of: SO_0000673
so part of: K5658_RS23030
location: 16081..16758
location: region:16081-16758:1
so has part: feature:16081-16758:1:exon

WP_221067486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16081-16758:1:exon

K5658_RS23035
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23035
old locus tag: MishRS11D_45890
so part of: sequence
location: 17230..17433
location: region:17230-17433:1
so has part: feature:17230-17433:1:exon
subclass of: SO_0000010

80837138
type: Gene
SIO_000068: ncbigene

position:17230:1
position: 17230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17433:1
position: 17433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17230-17433:1:exon

K5658_RS23035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23035
old locus tag: MishRS11D_45890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGSQKAWIDNLDNPIVLIGFIVFILSGVIVSKIKNSKQQTKGYNSPIINSNGSVNYSIDKSKNNKNL
SIO_010081: K5658_RS23035
subclass of: SO_0000673
so part of: K5658_RS23035
location: 17230..17433
location: region:17230-17433:1
so has part: feature:17230-17433:1:exon

WP_221067487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17230-17433:1:exon

K5658_RS23040
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23040
old locus tag: MishRS11D_45900
so part of: sequence
location: 17430..18716
location: region:17430-18716:1
so has part: feature:17430-18716:1:exon
subclass of: SO_0000010

80837139
type: Gene
SIO_000068: ncbigene

position:17430:1
position: 17430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18716:1
position: 18716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17430-18716:1:exon

K5658_RS23040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23040
old locus tag: MishRS11D_45900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLDKKTDGHNSPIIDAKNVSIKQGISPDLVDKWMLFGEEKYQELLKKYKELENKLADKTGDNAENAKLKLISGDLYGAEQLLKIFNVPIPRNLFFTGRSDILEKLREALQNENKIAITPSKRATALSGLGGVGKTQTVAEYAYRYKDEYSAVLWVLADGKDLLLNSFAQLSGLLGFKGEKQNDQILAVQSWLRNNNGWLLIFDNAETLDLLTAAKELLPTSAEGHVLFTTRAQATGGLASVIVDCFDNDTGAVFLLRRSKWVAIDLTTLEKVRPSVSDKDWQVATELVYELGGLALAIDHAGAYIEQTECGLDGYLRRYRNNSAMMLKDCDYVQRGNDYPNSVYRTFLLALEKVKKRSLLANEILLDSALFHPDGISEKLYTDYNFTELDKALATLKDYSLIQRVPEKHLFTVHRLVQVVIRDVCDG
SIO_010081: K5658_RS23040
subclass of: SO_0000673
so part of: K5658_RS23040
location: 17430..18716
location: region:17430-18716:1
so has part: feature:17430-18716:1:exon

WP_221067488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17430-18716:1:exon

K5658_RS23045
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23045
old locus tag: MishRS11D_45910
so part of: sequence
location: 18709..19851
location: region:18709-19851:1
so has part: feature:18709-19851:1:exon
subclass of: SO_0000010

80837140
type: Gene
SIO_000068: ncbigene

position:18709:1
position: 18709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19851:1
position: 19851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18709-19851:1:exon

K5658_RS23045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23045
old locus tag: MishRS11D_45910
inference: COORDINATES: protein motif:HMM:NF037660.2
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MDRETTWRERAEKLVNRVNLAFPNPEFENWDLCEELLLSATSICEQIQHFSINIEIASKLLHRVAFYLTEKGEYIKSESLYLESIDIKEKQHYYTDISVSISNLAGLYLAKGKYNLVEPLFQRSIMLDEKYLGENHYYTTPSLLGLAELYRTQGKYEKAMLLLQKSLAIIENSLGQNHPQFAQCLNNQAGIYHDQGKYSQAEELYKQSIKIREKIFKENHPKIAETLYNLGVLYREKNKFKQAEYLLERSFVILENSLGKTHPRIGGLLYNLAELYDVQGKYEQAESSYQKSLSILEKALGKDHIEVAVCLHGLAIFFQMQKEHEQALPLYQRSLSILESTLGENHKNTKRVRLNYKFFLIIRNTKNITNQAIRLVKSFL
SIO_010081: K5658_RS23045
subclass of: SO_0000673
so part of: K5658_RS23045
location: 18709..19851
location: region:18709-19851:1
so has part: feature:18709-19851:1:exon

WP_221067453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18709-19851:1:exon

K5658_RS23050
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23050
old locus tag: MishRS11D_45920
so part of: sequence
location: complement(20195..20425)
location: region:20195-20425:-1
so has part: feature:20195-20425:-1:exon
subclass of: SO_0000010

80837141
type: Gene
SIO_000068: ncbigene

position:20195:-1
position: 20195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20425:-1
position: 20425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20195-20425:-1:exon

K5658_RS23050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23050
old locus tag: MishRS11D_45920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFVVIFVRREEREKEARWSKEYDTEAEANEAIFEAKRKAIGYALFDRESQKFVKSKNFAFKDYETGGLTPNSDF
SIO_010081: K5658_RS23050
subclass of: SO_0000673
so part of: K5658_RS23050
location: complement(20195..20425)
location: region:20195-20425:-1
so has part: feature:20195-20425:-1:exon

WP_221067454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20195-20425:-1:exon

K5658_RS23055
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23055
old locus tag: MishRS11D_45930
so part of: sequence
location: complement(20443..20655)
location: region:20443-20655:-1
so has part: feature:20443-20655:-1:exon
subclass of: SO_0000010

80837142
type: Gene
SIO_000068: ncbigene

position:20443:-1
position: 20443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20655:-1
position: 20655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20443-20655:-1:exon

K5658_RS23055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23055
old locus tag: MishRS11D_45930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVFIKEDGERKTVVSAEYPTWAEAWPDIRDSFENGGATDCAILDRDFHNLVGPASFASEIAARPTAGARQ
SIO_010081: K5658_RS23055
subclass of: SO_0000673
so part of: K5658_RS23055
location: complement(20443..20655)
location: region:20443-20655:-1
so has part: feature:20443-20655:-1:exon

WP_221067455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20443-20655:-1:exon

K5658_RS23060
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23060
old locus tag: MishRS11D_45950
so part of: sequence
location: complement(21217..21549)
location: region:21217-21549:-1
so has part: feature:21217-21549:-1:exon
subclass of: SO_0000010

80837143
type: Gene
SIO_000068: ncbigene

position:21217:-1
position: 21217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21549:-1
position: 21549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21217-21549:-1:exon

K5658_RS23060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23060
old locus tag: MishRS11D_45950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004174001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease subunit M
translation: MPIEIETDREPDSLPKPPLFHPGEVVATPGAVDASTDEYLFQCLTRHLGGDWGHVCPEDAQSNDAALEHGSRILSAYPIDPGKPCYGNNCLWIITEWDRSVTTFLLPDEY
SIO_010081: K5658_RS23060
subclass of: SO_0000673
so part of: K5658_RS23060
location: complement(21217..21549)
location: region:21217-21549:-1
so has part: feature:21217-21549:-1:exon

WP_221067490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21217-21549:-1:exon

K5658_RS23065
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23065
old locus tag: MishRS11D_45960
pseudo: true
so part of: sequence
location: complement(<22116..22589)
location: region:22116-22589:-1
so has part: feature:22116-22589:-1:exon
subclass of: SO_0000010

80837144
type: Gene
SIO_000068: ncbigene

position:22116:-1
position: 22116
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:22589:-1
position: 22589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22116-22589:-1:exon

K5658_RS23065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23065
old locus tag: MishRS11D_45960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013105508.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
SIO_010081: K5658_RS23065
subclass of: SO_0000673
so part of: K5658_RS23065
location: complement(<22116..22589)
location: region:22116-22589:-1
so has part: feature:22116-22589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22116-22589:-1:exon

K5658_RS23070
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23070
old locus tag: MishRS11D_45970
so part of: sequence
location: complement(22604..22888)
location: region:22604-22888:-1
so has part: feature:22604-22888:-1:exon
subclass of: SO_0000010

80837145
type: Gene
SIO_000068: ncbigene

position:22604:-1
position: 22604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22888:-1
position: 22888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22604-22888:-1:exon

K5658_RS23070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23070
old locus tag: MishRS11D_45970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011254833.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MTQPTQRTARLEARIAPDMLNVVKRAAEIQGRSVSDFVVSAAHDAARRTIEETEIIRLSVEDQRRFVEAILNPPEPTPALRRAFARHHELFGGE
SIO_010081: K5658_RS23070
subclass of: SO_0000673
so part of: K5658_RS23070
location: complement(22604..22888)
location: region:22604-22888:-1
so has part: feature:22604-22888:-1:exon

WP_221067457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22604-22888:-1:exon

K5658_RS23075
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23075
old locus tag: MishRS11D_45980
so part of: sequence
location: complement(23055..23636)
location: region:23055-23636:-1
so has part: feature:23055-23636:-1:exon
subclass of: SO_0000010

80837146
type: Gene
SIO_000068: ncbigene

position:23055:-1
position: 23055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23636:-1
position: 23636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23055-23636:-1:exon

K5658_RS23075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23075
old locus tag: MishRS11D_45980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000904911.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MRIGYARVSRGDSQEVQAQVEALKAAGCERVYTEEASGGRWDRPELHRLLDHLRPGDILVVWKLDRLSRSLKDLIALLERIEGAGATFESLTEHIETRSPAGRMLTQMLGSFAEFERAMIRERTRQGLEYAQSQGRKGGRRHKLTPAQRALIVRLVDSGEQKAADAARSFKVSEATISRILAEHRQESRKGKS
SIO_010081: K5658_RS23075
subclass of: SO_0000673
so part of: K5658_RS23075
location: complement(23055..23636)
location: region:23055-23636:-1
so has part: feature:23055-23636:-1:exon

WP_221067458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23055-23636:-1:exon

K5658_RS23080
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23080
old locus tag: MishRS11D_45990
so part of: sequence
location: complement(23867..24802)
location: region:23867-24802:-1
so has part: feature:23867-24802:-1:exon
subclass of: SO_0000010

80837147
type: Gene
SIO_000068: ncbigene

position:23867:-1
position: 23867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24802:-1
position: 24802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23867-24802:-1:exon

K5658_RS23080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23080
old locus tag: MishRS11D_45990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574257.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ImmA/IrrE family metallo-endopeptidase
translation: MAKNLLLTAKTAQDINNRIDRVLRGLGNPEPPLRLEDVRELLKLDRAFYKADDPSVIQETISRIRIATIQVYQRPTLLIEAIQKFSLKALYIPDRKRILLDASLPEKKHRWNEAHEIGHSLIPWHDEMMLGDNIITLSHNCHEHIEAEANYAAGQLLFLRDRFLMEACSVEPTINSINRLHNIFGNTISTTLYRFIETVGVELPIVGLITDHPHIMRRPETFDYDKPCRHFIQSPAFAKRFSKLSETELFDSVSGYCGSQRGGSLGKAELILDDDNGSQHRFIFETFFNTYDALTLGVYCHPESRIIAIAG
SIO_010081: K5658_RS23080
subclass of: SO_0000673
so part of: K5658_RS23080
location: complement(23867..24802)
location: region:23867-24802:-1
so has part: feature:23867-24802:-1:exon

WP_221067459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23867-24802:-1:exon

K5658_RS23085
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23085
old locus tag: MishRS11D_46000
so part of: sequence
location: complement(24818..25303)
location: region:24818-25303:-1
so has part: feature:24818-25303:-1:exon
subclass of: SO_0000010

80837148
type: Gene
SIO_000068: ncbigene

position:24818:-1
position: 24818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25303:-1
position: 25303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24818-25303:-1:exon

K5658_RS23085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23085
old locus tag: MishRS11D_46000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011578842.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKIDVTREWCLRMAQLEADSDIGVGRYALNSIFDSETPSPMENLEEPTIAFSRFVRLMRRNHGLTVEKLAEDADVDIAELVEIEDDTRYKPQPRTVYQLANYFQVPRGKLLQVAGLTVPKDSRIIEEAFRFAARSEPVAALSPEERAALETFVAVLSEQKP
SIO_010081: K5658_RS23085
subclass of: SO_0000673
so part of: K5658_RS23085
location: complement(24818..25303)
location: region:24818-25303:-1
so has part: feature:24818-25303:-1:exon

WP_221067460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24818-25303:-1:exon

K5658_RS23090
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23090
old locus tag: MishRS11D_46010
so part of: sequence
location: complement(25300..25938)
location: region:25300-25938:-1
so has part: feature:25300-25938:-1:exon
subclass of: SO_0000010

80837149
type: Gene
SIO_000068: ncbigene

position:25300:-1
position: 25300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25938:-1
position: 25938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25300-25938:-1:exon

K5658_RS23090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23090
old locus tag: MishRS11D_46010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020818061.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTATVSPIYLFNVEKREPEEAELWDAITEQQISDWEGEWGPELSKSIQRLKRAGVDRRSWPQSRHWNWRDKKADHLQGLLACQGFSVVGGGLTQGMMIVDTAKKRCRIESQKNKHIVYIEYLENAPWNRKELFDPPRYRGVGSILIRAAIELSKNESFKGRIGLHSLPQADEFYADTCNMTDLGVDAGYYGLRYFEMTPEQAVAFIEKGNQL
SIO_010081: K5658_RS23090
subclass of: SO_0000673
so part of: K5658_RS23090
location: complement(25300..25938)
location: region:25300-25938:-1
so has part: feature:25300-25938:-1:exon

WP_221067461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25300-25938:-1:exon

K5658_RS23095
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23095
old locus tag: MishRS11D_46020
so part of: sequence
location: complement(25935..26150)
location: region:25935-26150:-1
so has part: feature:25935-26150:-1:exon
subclass of: SO_0000010

80837150
type: Gene
SIO_000068: ncbigene

position:25935:-1
position: 25935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26150:-1
position: 26150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25935-26150:-1:exon

K5658_RS23095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23095
old locus tag: MishRS11D_46020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009734077.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MTATKKTMTLNLTDAEMRALEEMCVKKDLSKTAVLRQALRLYQMVEARIEKGDKLFFEDDGSKEKTEVMML
SIO_010081: K5658_RS23095
subclass of: SO_0000673
so part of: K5658_RS23095
location: complement(25935..26150)
location: region:25935-26150:-1
so has part: feature:25935-26150:-1:exon

WP_221067462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25935-26150:-1:exon

K5658_RS23100
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23100
old locus tag: MishRS11D_46040
so part of: sequence
location: 26295..27227
location: region:26295-27227:1
so has part: feature:26295-27227:1:exon
subclass of: SO_0000010

80837151
type: Gene
SIO_000068: ncbigene

position:26295:1
position: 26295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27227:1
position: 27227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26295-27227:1:exon

K5658_RS23100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23100
old locus tag: MishRS11D_46040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015729941.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multiubiquitin domain-containing protein
translation: MKIMTDVRNATFEDVQEAALAGCSIHQHDLHEVLIGNEKLEFHSAVIDDPVPTGAQILEVAHARPADEHLVFQVLNSGLLEELRPDETTDLRTKGVEKFLVFRNDRSFRFELDGRMFEWGGNLISGLTLKKLAGVDPKDYGVWLEVRGAGEDRPIADKDLVDLSAPGTERFFTGIVQTTEGLGTPVLPAKCRRYLTDRGMKFEEVGEGGQHAVILRGFALPIGRFDAGTADILIYLPGGYPDNPPDMFYCQPWLKLVPANRYPRAADQPLVFRGQPWQRWSRHNTTWRPGVDGIWTMVKRVENALLEAAS
SIO_010081: K5658_RS23100
subclass of: SO_0000673
so part of: K5658_RS23100
location: 26295..27227
location: region:26295-27227:1
so has part: feature:26295-27227:1:exon

WP_246628711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26295-27227:1:exon

K5658_RS23105
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23105
old locus tag: MishRS11D_46050
so part of: sequence
location: 27224..28633
location: region:27224-28633:1
so has part: feature:27224-28633:1:exon
subclass of: SO_0000010

80837152
type: Gene
SIO_000068: ncbigene

position:27224:1
position: 27224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28633:1
position: 28633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27224-28633:1:exon

K5658_RS23105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23105
old locus tag: MishRS11D_46050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574262.1
GO function: GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ThiF family adenylyltransferase
translation: MTCIDLTFQENHLQTLRGLVLREDGVEAAAYILCGESRIESDPWERRARRRLSSYEVVPIPPEDAVSASDRHITWNTASFVRLLKRAKEEGLVAGIVHAHPGGPPRFSDQDDRNERELVRLALNRNGDGASLVSVLLTGAGEVRARLWPDLHAPLDAESIRAIGQKLAFYDPALPMRGDDVFARQALAFGPELNARLKGMRIGIVGCGGTGSATALLLARLGAGQLVLFDDDIVETTNLNRLHGARRADADSMRPKVDVVAREIAEMGIGTRVVPMRGWIGNPAFRDALKSCDVIFGCTDDHDGRLLLNRMAYFYLIPVLDMGLAIEPQPGGEGMRELSGRVTVLTPGAPCLLCRHIVDPVAARDEDLKRHNPEEHERRKREAYVRGAGNPAPAVVTFTTATACLAVDELIQGLTGFRGPEGWVWQRTRRFDLMQDRRPGAIQEPCCPICSETGYWGRADVQPFLDRAG
SIO_010081: K5658_RS23105
subclass of: SO_0000673
so part of: K5658_RS23105
location: 27224..28633
location: region:27224-28633:1
so has part: feature:27224-28633:1:exon

WP_221067463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27224-28633:1:exon

K5658_RS23110
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23110
old locus tag: MishRS11D_46060
so part of: sequence
location: 28713..29000
location: region:28713-29000:1
so has part: feature:28713-29000:1:exon
subclass of: SO_0000010

80837153
type: Gene
SIO_000068: ncbigene

position:28713:1
position: 28713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29000:1
position: 29000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28713-29000:1:exon

K5658_RS23110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23110
old locus tag: MishRS11D_46060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574180.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6527 family protein
translation: MDRHPKPDELPPGLLVVVKDGGYLKWACFRCPGGCGEKLQLSLNPSRRPRWTVGLDWLRRPTLTPSVHQFNACRCHFVLKNGIVNWCRDSGRRGA
SIO_010081: K5658_RS23110
subclass of: SO_0000673
so part of: K5658_RS23110
location: 28713..29000
location: region:28713-29000:1
so has part: feature:28713-29000:1:exon

WP_246628708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28713-29000:1:exon

K5658_RS23115
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23115
old locus tag: MishRS11D_46070
so part of: sequence
location: 29105..29287
location: region:29105-29287:1
so has part: feature:29105-29287:1:exon
subclass of: SO_0000010

80837154
type: Gene
SIO_000068: ncbigene

position:29105:1
position: 29105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29287:1
position: 29287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29105-29287:1:exon

K5658_RS23115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23115
old locus tag: MishRS11D_46070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013966165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKNTGDGYRKGSVTDRTQTHNPKTDSWVKRNATTGKFMDQKSDGTPFKGVAKEKDGRRN
SIO_010081: K5658_RS23115
subclass of: SO_0000673
so part of: K5658_RS23115
location: 29105..29287
location: region:29105-29287:1
so has part: feature:29105-29287:1:exon

WP_221067464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29105-29287:1:exon

K5658_RS23120
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23120
old locus tag: MishRS11D_46080
so part of: sequence
location: 29487..30119
location: region:29487-30119:1
so has part: feature:29487-30119:1:exon
subclass of: SO_0000010

80837155
type: Gene
SIO_000068: ncbigene

position:29487:1
position: 29487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30119:1
position: 30119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29487-30119:1:exon

K5658_RS23120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23120
old locus tag: MishRS11D_46080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020479638.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SprT-like domain-containing protein
translation: MKPTQETYTALQSAYEFFNRELFGGALPECLITLTRKEKRVYGYFWGQRFEEIGGTQKTDEIAMNPQHFKSRSVAQALSTLVHEMCHQWQAHHGTPSRSAYHNREWADKMESLGLMPSDTGQPGGKRTGQKVSHYIIPGGLFERVCAVILSDGFKLAWGEIVAEVEGDEGSGKGRTTRAKFTCPDCRANAWGKPDLNLVCGDCMVPMVAE
SIO_010081: K5658_RS23120
subclass of: SO_0000673
so part of: K5658_RS23120
location: 29487..30119
location: region:29487-30119:1
so has part: feature:29487-30119:1:exon

WP_221067465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29487-30119:1:exon

K5658_RS23125
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23125
old locus tag: MishRS11D_46090
so part of: sequence
location: 30664..31263
location: region:30664-31263:1
so has part: feature:30664-31263:1:exon
subclass of: SO_0000010

80837156
type: Gene
SIO_000068: ncbigene

position:30664:1
position: 30664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31263:1
position: 31263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30664-31263:1:exon

K5658_RS23125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23125
old locus tag: MishRS11D_46090
inference: COORDINATES: protein motif:HMM:NF013930.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003896 - DNA primase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CHC2 zinc finger domain-containing protein
translation: MDKETEKGADWLDFKEIKARAEVRPVLGHFGILEHLEERGPELVGWCPLGREHGKQDSFSFNVEKRSFQCFACKARGSVLDFVAKYGDISLRDAAKTVMGILDEEPESAEAEPEGRPYGKAGRGMRKPAARRPGVRRGSKRERPNEPNRETGGLPFFTWSHAESLVRESMLDPARLVVIDADALETFLKVTARPSEETA
SIO_010081: K5658_RS23125
subclass of: SO_0000673
so part of: K5658_RS23125
location: 30664..31263
location: region:30664-31263:1
so has part: feature:30664-31263:1:exon

WP_221067466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30664-31263:1:exon

K5658_RS23130
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23130
old locus tag: MishRS11D_46110
so part of: sequence
location: complement(31608..32519)
location: region:31608-32519:-1
so has part: feature:31608-32519:-1:exon
subclass of: SO_0000010

80837157
type: Gene
SIO_000068: ncbigene

position:31608:-1
position: 31608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32519:-1
position: 32519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31608-32519:-1:exon

K5658_RS23130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23130
old locus tag: MishRS11D_46110
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHDEHQNDTNGNIDKPAGIHEASQAEADKTNLSRIILAVGIGLLAVGILTSVFYPSPGTDKKLPSSQALESLRSSLSSYNQARNLGEPSFEATLIDIRLELYQAIASGGEASQSLPSASLLQYPVHKNDVAFRIEKDDPAIRPDYGKMRTTDYFLHGFIKAFKHKKYKSPNVWVVCLILKQNGKGQAGNVAVDMERVELKEVRELYDASFMGIHPEDDALRGPFSVTKKEQVALGDMGSGSGVIIPLAITNVFIPINEMDMESKSVVSNIAYIPVNISFLSGKSKERKTLPVEKIVSDPIIIN
SIO_010081: K5658_RS23130
subclass of: SO_0000673
so part of: K5658_RS23130
location: complement(31608..32519)
location: region:31608-32519:-1
so has part: feature:31608-32519:-1:exon

WP_221067467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31608-32519:-1:exon

K5658_RS23135
type: Gene
subclass of: SO_0000704
RO_0002162: 1760988
locus tag: K5658_RS23135
old locus tag: MishRS11D_46120
so part of: sequence
location: complement(32561..33361)
location: region:32561-33361:-1
so has part: feature:32561-33361:-1:exon
subclass of: SO_0000010

80837158
type: Gene
SIO_000068: ncbigene

position:32561:-1
position: 32561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33361:-1
position: 33361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32561-33361:-1:exon

K5658_RS23135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1760988
locus tag: K5658_RS23135
old locus tag: MishRS11D_46120
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPPKGKKKPPSTADRLNTVLGLIASILGIFLTVSTLYGKSLELKDGDEKTKLELQKLRDSARESAPQIDIEYAELSNDLFISLSDSKKRQDRKQNLFLNYPVIPNEVVDENIAIKPVSLNPSTSPDGDGEQRVTFLVLKNKGKRDAKDVKVTFERLALSRTVRVNEEKGKATGDYIRQIKEKAEAYSQSEISIPYPIETNQGVLIPLFVTIYPYESQGKEWDVASKAVFLPKTLGFSDPLDGSVKSENIRQMRDPVRLESGLLERG
SIO_010081: K5658_RS23135
subclass of: SO_0000673
so part of: K5658_RS23135
location: complement(32561..33361)
location: region:32561-33361:-1
so has part: feature:32561-33361:-1:exon

WP_221067468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32561-33361:-1:exon