Fluviibacter phosphoraccumulans strain ICHIAU1 plasmid pICHIAU1, complete sequence.
type: Entry
definition: Fluviibacter phosphoraccumulans strain ICHIAU1 plasmid pICHIAU1, complete sequence.
sequence version: NZ_AP022346.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_AP022346.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00201024
keyword: RefSeq
source: Fluviibacter phosphoraccumulans
organism: Fluviibacter phosphoraccumulans
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Rhodocyclales; Fluviibacteraceae; Fluviibacter.
reference: 1
references: 33664144
reference: 2
references: 32915122
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP022346.1.\nAnnotated at DFAST https://dfast.nig.ac.jp/\n\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.6\nGenome Coverage :: 633x\nSequencing Technology :: PacBio Sequel; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 10:15:52\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,395\nCDSs (total) :: 2,341\nGenes (coding) :: 2,325\nCDSs (with protein) :: 2,325\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 3\nPseudo Genes (total) :: 16\nCDSs (without protein) :: 16\nPseudo Genes (ambiguous residues) :: 0 of 16\nPseudo Genes (frameshifted) :: 5 of 16\nPseudo Genes (incomplete) :: 11 of 16\nPseudo Genes (internal stop) :: 2 of 16\nPseudo Genes (multiple problems) :: 2 of 16\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 16356
topology: circular
so has quality: SO_0000988
location: 1..16356
location: region:1-16356:1
RO_0002162: 1751046

NZ_AP022346
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00201024
type: BioSample
SIO_000068: biosample

1
title: Complete Genome and Plasmid Sequences of Three Fluviibacter phosphoraccumulans Polyphosphate-Accumulating Bacterioplankton Strains Isolated from Surface River Water
author: Suda, W.
author: Ogata, Y.
author: Takayasu, L.
author: Shindo, C.
author: Watanabe, K.
journal: Microbiol Resour Announc 10 (9), e01474-20 (2021)
pubmed: 33664144
comments: DOI:10.1128/MRA.01474-20 Publication Status: Online-Only

33664144
type: PubMed
SIO_000068: pubmed

2
title: Fluviibacter phosphoraccumulans gen. nov., sp. nov., a polyphosphate-accumulating bacterium of Fluviibacteraceae fam. nov., isolated from surface river water
author: Watanabe, K.
author: Morohoshi, S.
author: Kunihiro, T.
author: Ishii, Y.
author: Takayasu, L.
author: Ogata, Y.
author: Shindo, C.
author: Suda, W.
journal: Int J Syst Evol Microbiol
volume: 70
issue: 10
pages: 5551-5560
year: 2020
pubmed: 32915122
comments: DOI:10.1099/ijsem.0.004446

32915122
type: PubMed
SIO_000068: pubmed

3
title: Direct Submission
author: Watanabe, K.
author: Suda, W.
journal: Submitted (23-JAN-2020) Contact:Keiji Watanabe Center for Environmental Science in Saitama, Water Environment Group; Kamitanadare914, Kazo, Saitama 347-0115, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16356:1
position: 16356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16356:1:source
so part of: sequence
organism: Fluviibacter phosphoraccumulans
mol type: genomic DNA
strain: ICHIAU1
isolation source: water
culture collection: JCM:33382
plasmid: pICHIAU1
country: Japan:Saitama, Fukaya, Koyama River, Ichino Bridge
lat lon: 36.2269 N 139.2191 E
collection date: 2015-08-06

1751046
type: Taxonomy
SIO_000068: taxonomy

ICHIAU1_RS11890
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11890
so part of: sequence
location: complement(join(15662..16356,1..1693))
location: region:1-16356:-1
so has part: feature:1-1693:-1:exon
so has part: feature:15662-16356:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16356:-1
position: 16356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1693:-1:exon

position:1693:-1
position: 1693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15662-16356:-1:exon

position:15662:-1
position: 15662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ICHIAU1_RS11890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019998531.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLFVALKTAKTEEDVKDAYIAALGLKKYNKGLVDIQTEEVWFEAKEAATPPVLMFTQLLFYVRDARKKGDHIPPFLAVIDREKAAIMETAKALPIMADKTIAWPKSASQVDRSVAAQAAPYIETHFVVYKIDTHEKEFIQAVKAAIKKGELIRTPITPDNLRQVFDKWVAMIGRELDGVDESDYALLFFADIMHDGVKAAMSNLPARLLHEGDKPLFLLNGNTYELGSDRGYRNFWAIYHRPPEEAYRHYLLERRDSLLPLDERSFKGAYYTPLHVVDKAYDLLAETLGKNWQDKYLVWDMCCGVGNLEVKHSNHRNIFMSTLDKADVDVMTASRTCVAATKFQYDYLNDDITDTGEIDYSLTNKLPPELRQAIMDAKAGKPGAKKILVLMNPPYGEASSSESVVSTGKHKPKIASNQIRDFMQSQDWGYASRELFVQFLVRIQRELPNATIAMFSTLKYVNAPNFEKFREHWKAQYLGGFVVHSKAFDGLNGNFPIGFLVWDASVPEPIGSITTKVLDKDGDCLGDKLFFNIPPSRYLNLWIQRIKPNAQNIPLKNAVHPQNNHAKVTSWVAEAIGYLWCNSNDMQQANQTALLSSVFSAGNGFYVTRDNLWQAAVVFAVRMVIPHTWINHNDQFLQPSEPLTEEFKADCLTYMLFSGKNLSAGANDLEWNDRKWSLVNHFIPFSEDEVGASGRFESNSMSSYLAGLTLSTEAQSVMDEGKKLWRRYHNMQFEKSIRDEYKLNRPDVGWYQIRKALEANDDNEAIDLAPFKEAYDTLSGKLRPQVYELGFLKA
SIO_010081: ICHIAU1_RS11890
subclass of: SO_0000673
so part of: ICHIAU1_RS11890
location: complement(join(15662..16356,1..1693))
location: region:1-16356:-1
so has part: feature:1-1693:-1:exon
so has part: feature:15662-16356:-1:exon

WP_162051018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15662-16356:-1:exon

ICHIAU1_RS11895
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11895
old locus tag: ICHIAU1_P010
so part of: sequence
location: complement(1922..3586)
location: region:1922-3586:-1
so has part: feature:1922-3586:-1:exon
subclass of: SO_0000010

position:1922:-1
position: 1922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3586:-1
position: 3586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1922-3586:-1:exon

ICHIAU1_RS11895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11895
old locus tag: ICHIAU1_P010
inference: COORDINATES: protein motif:HMM:NF015354.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIYHLSVKTISRSAGRSATAAAAYRAGVEILDARTGEVHDYRRKGGVEHSEIVLPKDAPDWARDRAALWNAAEVAEVRKNSTVAREFEIALPSELSGEARRALAVDFAREIVGRHGCAVDVSIHEPGREGDSRNHHAHLLLTTRRLGSEGFTEKTRELDQRQSGEVDYWRSRYAELQNERLMDAGLSVRVDHRSLKAQGVDREPTRHLGVGAVGYERRTGQASRRRLTHEAEITERLQLAKEAGELARAGAVVDQTILDLSGDLERAKAEHRQQVSDKYGLKAVAQAVERLNVPGPTGQEPAKKLTIANLYGVESAPKPEEKPEVVQMEQKPETTEAQVKSEHGWGVKIAGLKPVSEQQPMPEIQEREEPKETRPMFDIQAYLQHVELSVDRWKKGQASKEDAARINKFADVYWKKRHKIYEQIKRCSTKARRLWDRLNERLTEHHRRKPQKPTGMGAIFKQGDYKESFGRWQDKEIELDRRFRKIDRLHSKFASMSWNDGWLKLADKKMGERFTERACLLHQSIERETQRRKVAAQNRLNEVELEPKRGPRR
SIO_010081: ICHIAU1_RS11895
subclass of: SO_0000673
so part of: ICHIAU1_RS11895
location: complement(1922..3586)
location: region:1922-3586:-1
so has part: feature:1922-3586:-1:exon

WP_162071370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1922-3586:-1:exon

ICHIAU1_RS11900
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11900
old locus tag: ICHIAU1_P020
so part of: sequence
location: 3759..4043
location: region:3759-4043:1
so has part: feature:3759-4043:1:exon
subclass of: SO_0000010

position:3759:1
position: 3759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4043:1
position: 4043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3759-4043:1:exon

ICHIAU1_RS11900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11900
old locus tag: ICHIAU1_P020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020227807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mobilization protein
translation: MSTTIDSRIAKLEASLKQAKAQKQKIEARKRAVESKQKRALDTRKKILIGAAIQSMIERGQWSADNLQKIMDQTLVRDDDRALFNLPPKATSNG
SIO_010081: ICHIAU1_RS11900
subclass of: SO_0000673
so part of: ICHIAU1_RS11900
location: 3759..4043
location: region:3759-4043:1
so has part: feature:3759-4043:1:exon

WP_162051026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3759-4043:1:exon

ICHIAU1_RS11905
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11905
old locus tag: ICHIAU1_P030
so part of: sequence
location: 4149..4328
location: region:4149-4328:1
so has part: feature:4149-4328:1:exon
subclass of: SO_0000010

position:4149:1
position: 4149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4328:1
position: 4328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4149-4328:1:exon

ICHIAU1_RS11905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11905
old locus tag: ICHIAU1_P030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVLKIHTLDAEKRLNETVFGPEFGQFAFEALTKDLPKGGRLRERAKSYAKALANDILR
SIO_010081: ICHIAU1_RS11905
subclass of: SO_0000673
so part of: ICHIAU1_RS11905
location: 4149..4328
location: region:4149-4328:1
so has part: feature:4149-4328:1:exon

WP_162051017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4149-4328:1:exon

ICHIAU1_RS11915
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11915
old locus tag: ICHIAU1_P040
so part of: sequence
location: complement(4370..5206)
location: region:4370-5206:-1
so has part: feature:4370-5206:-1:exon
subclass of: SO_0000010

position:4370:-1
position: 4370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5206:-1
position: 5206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4370-5206:-1:exon

ICHIAU1_RS11915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11915
old locus tag: ICHIAU1_P040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoglycoside O-phosphotransferase APH(6)-Id
translation: MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKPIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATEIAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMMSNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY
SIO_010081: ICHIAU1_RS11915
subclass of: SO_0000673
so part of: ICHIAU1_RS11915
location: complement(4370..5206)
location: region:4370-5206:-1
so has part: feature:4370-5206:-1:exon

WP_000480968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4370-5206:-1:exon

ICHIAU1_RS11920
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
gene: aph(3'')-Ib
locus tag: ICHIAU1_RS11920
old locus tag: ICHIAU1_P050
so part of: sequence
location: complement(5206..6009)
location: region:5206-6009:-1
so has part: feature:5206-6009:-1:exon
subclass of: SO_0000010

position:6009:-1
position: 6009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5206-6009:-1:exon

ICHIAU1_RS11920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
gene: aph(3'')-Ib
locus tag: ICHIAU1_RS11920
old locus tag: ICHIAU1_P050
function: streptomycin resistance
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoglycoside O-phosphotransferase APH(3'')-Ib
translation: MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASRRGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAWPSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLLARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLRCTGLIDLGRLGTADRYADLALMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG
SIO_010081: ICHIAU1_RS11920
subclass of: SO_0000673
so part of: ICHIAU1_RS11920
location: complement(5206..6009)
location: region:5206-6009:-1
so has part: feature:5206-6009:-1:exon

WP_031943936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5206-6009:-1:exon

ICHIAU1_RS11925
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11925
old locus tag: ICHIAU1_P070
so part of: sequence
location: complement(6075..6689)
location: region:6075-6689:-1
so has part: feature:6075-6689:-1:exon
subclass of: SO_0000010

position:6075:-1
position: 6075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6689:-1
position: 6689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6075-6689:-1:exon

ICHIAU1_RS11925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11925
old locus tag: ICHIAU1_P070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000904895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGDVLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAEFERDLIRERTMAGLASARARGRKGGRKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIERVTLYRYVGPKGELRDHGKHVLGLT
SIO_010081: ICHIAU1_RS11925
subclass of: SO_0000673
so part of: ICHIAU1_RS11925
location: complement(6075..6689)
location: region:6075-6689:-1
so has part: feature:6075-6689:-1:exon

WP_000904906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6075-6689:-1:exon

ICHIAU1_RS11930
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11930
old locus tag: ICHIAU1_P080
so part of: sequence
location: 6815..9700
location: region:6815-9700:1
so has part: feature:6815-9700:1:exon
subclass of: SO_0000010

position:6815:1
position: 6815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9700:1
position: 9700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6815-9700:1:exon

ICHIAU1_RS11930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11930
old locus tag: ICHIAU1_P080
function: transposition
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001138082.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPRRVTLTDRQKDALLRLPTSQTDLLKHYTLSDEDLGHIRLRRRVHNRFGFALQLCVLHYPGRVLAPGELIPAEVIEFIGAQLGLGADDLVDYAAREETRHEHLAELRGLYGFRTFSGRGASELKEWLFREAEMAVSNEDIARRFVAECRRTRTVLPATSTIERLCAAALVDAERRIETRIASRLPMPIREQLLALLEETADDRVTRFVWLRQFEPGSNSSSANRLLDRLEYLQRVDLPEDLLAGVPAHRVTRLRRQGERYYADGMRDLPEDRRLAILAVCVSEWQAMLADAVVETHDRIVGRLYRASERICHAKVADEAGVVRDTLKSFAEIGGALVDAQDDGQPLGDVIASGSGWDGLKTLVAMATRLTATMADDPLNHVLDGYHRFRRYAPRMLRLLDLRAAPVALPLLEAVTALRTGLNDAAMTSFLRPSSKWHRHLRAQRAGDARLWEIAVLFHLRDAFRSGDVWLTRSRRYGDLKHALVPAQAIAEGGRLAVPLRPEEWLADRQARLDMRLRELGRAARAGTIPGGSIENGVLHIEKLEAAAPTGAEDLVLDLYKQIPPTRITDLLLEVDAATGFTEAFTHLRTGAPCADRIGLMNVILAEGINLGLRKMADATNTHTFWELIRIGRWHVEGEAYDRALAMVVEAQAALPMARFWGMGTSASSDGQFFVATEQGEAMNLVNAKYGNTPGLKAYSHVSDQYAPFATQVIPATASEAPYILDGLLMNDAGRHIREQFTDTGGFTDHVFAACAILGYRFAPRIRDLPSKRLYAFNPSAAPAHLRALIGGKVNQAMIERNWPDILRIATTIAAGTVAPSQILRKLASYPRQNELATALREVGRVERTLFMIDWILDAELQRRAQIGLNKGEAHHALKRAISFHRRGEIRDRSAEGQHYRIAGMNLLAAIIIFWNTMKLGEVVANQKRDGKLLSPDLLAHVSPLGWEHINLTGEYRWPKP
SIO_010081: ICHIAU1_RS11930
subclass of: SO_0000673
so part of: ICHIAU1_RS11930
location: 6815..9700
location: region:6815-9700:1
so has part: feature:6815-9700:1:exon

WP_031943935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6815-9700:1:exon

ICHIAU1_RS11935
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11935
old locus tag: ICHIAU1_P100
so part of: sequence
location: complement(10513..11325)
location: region:10513-11325:-1
so has part: feature:10513-11325:-1:exon
subclass of: SO_0000010

position:10513:-1
position: 10513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11325:-1
position: 11325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10513-11325:-1:exon

ICHIAU1_RS11935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11935
old locus tag: ICHIAU1_P100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010643051.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MQPIRHPQKDFFVADILDAAPKDDTASMEHPLFALKAGDKRVRTYERNGVKVVVKPGADGCATIHDKDVWIYCISQMVEAMNRGRENISRTVRFTAYDFLTVTNRPVAGVGYQRMADALERLKGTTISTNIETPGYRKRGGFGLIDSWEVIERGQGDKMVAVEVTLPDWLYRSIESKQVLTLSRDYFRLRKPLDRRIYELARKHCGKQSHWTVQLDTLHEKTGSTAILREFRRVIRDLVESNKLPDYLVEFDDGSDMVTFYPRNISFRLK
SIO_010081: ICHIAU1_RS11935
subclass of: SO_0000673
so part of: ICHIAU1_RS11935
location: complement(10513..11325)
location: region:10513-11325:-1
so has part: feature:10513-11325:-1:exon

WP_242451643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10513-11325:-1:exon

ICHIAU1_RS11940
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11940
old locus tag: ICHIAU1_P110
so part of: sequence
location: complement(11340..11765)
location: region:11340-11765:-1
so has part: feature:11340-11765:-1:exon
subclass of: SO_0000010

position:11340:-1
position: 11340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11765:-1
position: 11765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11340-11765:-1:exon

ICHIAU1_RS11940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11940
old locus tag: ICHIAU1_P110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009665164.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2442 domain-containing protein
translation: MKPSNDEFDMATRRGSERLRKGPVATAARYDGRIGRLVVDLSTGLEIAFRPQDAQGIEKAKPDQLADIEISPSGLGIHFPKLDADLYLPALLEGFMGSKSWMAAQLGRRGGAVSTEAKAAAARENGKRGGRPRKVKDLVPA
SIO_010081: ICHIAU1_RS11940
subclass of: SO_0000673
so part of: ICHIAU1_RS11940
location: complement(11340..11765)
location: region:11340-11765:-1
so has part: feature:11340-11765:-1:exon

WP_162051025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11340-11765:-1:exon

ICHIAU1_RS11945
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11945
old locus tag: ICHIAU1_P120
so part of: sequence
location: complement(11752..12000)
location: region:11752-12000:-1
so has part: feature:11752-12000:-1:exon
subclass of: SO_0000010

position:11752:-1
position: 11752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12000:-1
position: 12000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11752-12000:-1:exon

ICHIAU1_RS11945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11945
old locus tag: ICHIAU1_P120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012290051.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4160 domain-containing protein
translation: MPTVLRINGFRVVIYPNDHRPAHVHVLGSDGEAIFKLHCPKGAVELRENFGLSRQEVDVVIKALQAEVVYLCGAWRRIHETE
SIO_010081: ICHIAU1_RS11945
subclass of: SO_0000673
so part of: ICHIAU1_RS11945
location: complement(11752..12000)
location: region:11752-12000:-1
so has part: feature:11752-12000:-1:exon

WP_162051024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11752-12000:-1:exon

ICHIAU1_RS11950
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11950
old locus tag: ICHIAU1_P130
so part of: sequence
location: complement(12052..12276)
location: region:12052-12276:-1
so has part: feature:12052-12276:-1:exon
subclass of: SO_0000010

position:12052:-1
position: 12052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12276:-1
position: 12276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12052-12276:-1:exon

ICHIAU1_RS11950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11950
old locus tag: ICHIAU1_P130
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: CopG family transcriptional regulator
translation: MAVTKRPKTIEQFIEAAPDAEKTIRQHGKQVAISFALPRELLDKADAQAKELCISRAAFIKLAINRLLSEEAKR
SIO_010081: ICHIAU1_RS11950
subclass of: SO_0000673
so part of: ICHIAU1_RS11950
location: complement(12052..12276)
location: region:12052-12276:-1
so has part: feature:12052-12276:-1:exon

WP_162051023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12052-12276:-1:exon

ICHIAU1_RS11955
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11955
old locus tag: ICHIAU1_P140
so part of: sequence
location: complement(12306..12950)
location: region:12306-12950:-1
so has part: feature:12306-12950:-1:exon
subclass of: SO_0000010

position:12306:-1
position: 12306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12950:-1
position: 12950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12306-12950:-1:exon

ICHIAU1_RS11955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11955
old locus tag: ICHIAU1_P140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010512412.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIITVGNTKGGVGKTTIALNLAIARALAGKDVWVVDGDRQGTAQTALTIRAESGRTPMVACSVYSDGATLRSQVQQQKDKYDDIVIDAGGRDSTALRAALALSDLLVVPFSPRSLDVWALADISNLIAEARSMRDGLRAVAILNNADTQGSDNKEAVEALADYPELEFLDIAVCRRKAIANAAGQGLAIKELAPKDQKAIAEVESLYNRVFASI
SIO_010081: ICHIAU1_RS11955
subclass of: SO_0000673
so part of: ICHIAU1_RS11955
location: complement(12306..12950)
location: region:12306-12950:-1
so has part: feature:12306-12950:-1:exon

WP_162051027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12306-12950:-1:exon

ICHIAU1_RS11960
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11960
old locus tag: ICHIAU1_P160
so part of: sequence
location: 13513..13893
location: region:13513-13893:1
so has part: feature:13513-13893:1:exon
subclass of: SO_0000010

position:13513:1
position: 13513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13893:1
position: 13893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13513-13893:1:exon

ICHIAU1_RS11960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11960
old locus tag: ICHIAU1_P160
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRVRKETWQVAALIAKMMQTSGQTRARISDKQMRLLAGRSRLESSVRERIREDALDYGYLIHRLDAGSSTSGNVIVALSALAAAKTLKRTDTFTDEQWATIRNGTFDFDSLQDELLNDEEDGAEE
SIO_010081: ICHIAU1_RS11960
subclass of: SO_0000673
so part of: ICHIAU1_RS11960
location: 13513..13893
location: region:13513-13893:1
so has part: feature:13513-13893:1:exon

WP_162051022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13513-13893:1:exon

ICHIAU1_RS11965
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11965
old locus tag: ICHIAU1_P170
so part of: sequence
location: 13896..14312
location: region:13896-14312:1
so has part: feature:13896-14312:1:exon
subclass of: SO_0000010

position:13896:1
position: 13896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14312:1
position: 14312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13896-14312:1:exon

ICHIAU1_RS11965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11965
old locus tag: ICHIAU1_P170
inference: COORDINATES: protein motif:HMM:NF014505.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MAIKFQPRIGAVVRCDFKGMIEPEMVKMRDVVVVARHSRNQRLVTIVPLSASQPQRPEPYHYELPSDPRPESDSMRPIWAKCDMIYTLSIDRLEMHYTRTRRGGRQLAQVILSDADMAAIKKCIAYAINLTYHDIVPA
SIO_010081: ICHIAU1_RS11965
subclass of: SO_0000673
so part of: ICHIAU1_RS11965
location: 13896..14312
location: region:13896-14312:1
so has part: feature:13896-14312:1:exon

WP_162051021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13896-14312:1:exon

ICHIAU1_RS11970
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11970
old locus tag: ICHIAU1_P180
so part of: sequence
location: complement(14413..14775)
location: region:14413-14775:-1
so has part: feature:14413-14775:-1:exon
subclass of: SO_0000010

position:14413:-1
position: 14413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14775:-1
position: 14775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14413-14775:-1:exon

ICHIAU1_RS11970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11970
old locus tag: ICHIAU1_P180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004514727.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVITPTSKGHDMAHPPETIDHATLARLVEAGVVRGVDVIAHLGGWSIMVKFGMTERMLAAKRGTIRSFRKFETLVAYLRPLGIVHMNVNAANFEQTSFKSSRVRPDASERMRRIMGKQK
SIO_010081: ICHIAU1_RS11970
subclass of: SO_0000673
so part of: ICHIAU1_RS11970
location: complement(14413..14775)
location: region:14413-14775:-1
so has part: feature:14413-14775:-1:exon

WP_242451720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14413-14775:-1:exon

ICHIAU1_RS11975
type: Gene
subclass of: SO_0000704
RO_0002162: 1751046
locus tag: ICHIAU1_RS11975
so part of: sequence
location: complement(15012..15644)
location: region:15012-15644:-1
so has part: feature:15012-15644:-1:exon
subclass of: SO_0000010

position:15012:-1
position: 15012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15644:-1
position: 15644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15012-15644:-1:exon

ICHIAU1_RS11975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1751046
locus tag: ICHIAU1_RS11975
inference: COORDINATES: protein motif:HMM:NF039733.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6338 family protein
translation: MEILSGDKILWFILFVMPGFLSVKIYELFVPGDARESKKLIFDSVAYSAIVYGISSPALYWWANTRFFEESLLGNCVLAFCVLFLLPCILPWLFQKIRRSEWILRFGVQHPVNSPWDFVFEKGKPYWTIVTLKNGNKIAGYYGPNSFASGSPAAEGIYLEQNWMISEDGGFERRRDSTAGILILPPDISTVEFFEVYTESESNHERQEHP
SIO_010081: ICHIAU1_RS11975
subclass of: SO_0000673
so part of: ICHIAU1_RS11975
location: complement(15012..15644)
location: region:15012-15644:-1
so has part: feature:15012-15644:-1:exon

WP_162051019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15012-15644:-1:exon