Mycoplasmopsis citelli strain NCTC10181 chromosome 1.
Mycoplasmopsis citelli (Mycoplasma citelli)
Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasmopsis.
Submitted (24-JAN-2019) WTSI, Pathogen Informatics, Wellcome Trust Sanger Institute, CB10 1SA, United Kingdom
REFSEQ INFORMATION: The reference sequence is identical to\nLR215036.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/13/2022 05:58:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 945\nCDSs (total) :: 900\nGenes (coding) :: 891\nCDSs (with protein) :: 891\nGenes (RNA) :: 45\nrRNAs :: 2, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 3, 3 (5S, 16S, 23S)\ntRNAs :: 34\nncRNAs :: 3\nPseudo Genes (total) :: 9\nCDSs (without protein) :: 9\nPseudo Genes (ambiguous residues) :: 0 of 9\nPseudo Genes (frameshifted) :: 5 of 9\nPseudo Genes (incomplete) :: 4 of 9\nPseudo Genes (internal stop) :: 2 of 9\nPseudo Genes (multiple problems) :: 2 of 9\n##Genome-Annotation-Data-END##
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF012372.2
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006886510.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_005683286.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795030.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004420660.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_004794825.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_004795697.1
GO:0019843 - rRNA binding [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015286896.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_002557453.1
COORDINATES: similar to AA sequence:RefSeq:WP_010925395.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302278.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287097.1
COORDINATES: similar to AA sequence:RefSeq:WP_014579870.1
3-keto-L-gulonate-6-phosphate decarboxylase UlaD
COORDINATES: similar to AA sequence:RefSeq:WP_014579869.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302274.1
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: protein motif:HMM:NF013579.2
COORDINATES: protein motif:HMM:TIGR00348.1
type I restriction endonuclease subunit R
COORDINATES: similar to AA sequence:RefSeq:WP_011264806.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_000612353.1
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: similar to AA sequence:RefSeq:WP_076611514.1
GO:0004803 - transposase activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013054718.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886488.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287357.1
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_013054493.1
COORDINATES: protein motif:HMM:NF024673.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: similar to AA sequence:RefSeq:WP_013355055.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886212.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795965.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF040319.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796567.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283616.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005683576.1
transcription antitermination protein NusB
COORDINATES: similar to AA sequence:RefSeq:WP_015287024.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_004795333.1
iron-sulfur cluster assembly scaffold protein
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: similar to AA sequence:RefSeq:WP_013354405.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004796507.1
COORDINATES: protein motif:HMM:NF016232.2
COORDINATES: similar to AA sequence:RefSeq:WP_013354516.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00621.2
COORDINATES: similar to AA sequence:RefSeq:WP_006608772.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608773.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: similar to AA sequence:RefSeq:WP_005683967.1
COORDINATES: protein motif:HMM:NF040179.1
type IV secretion system DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF021897.2
TraM recognition domain-containing protein
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF012651.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF037847.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1
GO:0015074 - DNA integration [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002557937.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024003.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004797108.1
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013054610.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013354583.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287618.1
COORDINATES: protein motif:HMM:NF024487.2
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_004795612.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795613.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: similar to AA sequence:RefSeq:WP_020002784.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020002785.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886351.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011283427.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: protein motif:HMM:NF020048.2
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354935.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004796403.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013301.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283665.1
COORDINATES: protein motif:HMM:TIGR00594.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF014177.2
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013054465.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013054674.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683226.1
COORDINATES: protein motif:HMM:NF013860.2
COORDINATES: similar to AA sequence:RefSeq:WP_004794882.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796342.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683581.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886250.1
COORDINATES: protein motif:HMM:NF022525.2
COORDINATES: similar to AA sequence:RefSeq:WP_005683631.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608809.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004797123.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: protein motif:HMM:TIGR00763.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886788.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456196.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004421511.1
COORDINATES: similar to AA sequence:RefSeq:WP_015510927.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796678.1
GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886246.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283501.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_006608405.1
COORDINATES: similar to AA sequence:RefSeq:WP_004797053.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287560.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794503.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: protein motif:HMM:NF014439.2
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_004794886.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_020003190.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283235.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF014437.2
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015287541.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886919.1
COORDINATES: similar to AA sequence:RefSeq:WP_011264568.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054267.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054759.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794246.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283442.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_004796968.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287119.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287103.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886705.1
COORDINATES: protein motif:HMM:NF025381.2
COORDINATES: similar to AA sequence:RefSeq:WP_005683577.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794579.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794577.1
COORDINATES: similar to AA sequence:RefSeq:WP_015510845.1
COORDINATES: protein motif:HMM:TIGR01145.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054261.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886638.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005684015.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796369.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608383.1
COORDINATES: similar to AA sequence:RefSeq:WP_011206262.1
type III restriction endonuclease subunit M
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795820.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795795.1
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:NF019976.2
nuclease-related domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004794806.1
COORDINATES: protein motif:HMM:NF019294.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054482.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949713.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004417109.1
COORDINATES: protein motif:HMM:NF013421.2
COORDINATES: similar to AA sequence:RefSeq:WP_006886884.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF039331.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886383.1
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004796691.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794644.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794643.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794640.1
COORDINATES: protein motif:HMM:NF015276.2
COORDINATES: similar to AA sequence:RefSeq:WP_006886512.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287593.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795891.1
COORDINATES: protein motif:HMM:NF025124.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796679.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004023924.1
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794616.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04518.1
GO:0005215 - transporter activity [Evidence IEA]
folate family ECF transporter S component
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_004795262.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886302.1
COORDINATES: similar to AA sequence:RefSeq:WP_015510908.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054790.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283803.1
COORDINATES: protein motif:HMM:NF003792.0
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015286881.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013734.2
COORDINATES: similar to AA sequence:RefSeq:WP_015286879.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456083.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287640.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF012235.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013054294.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794865.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354351.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020002976.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886648.1
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_013054801.1
COORDINATES: protein motif:HMM:NF024593.2
COORDINATES: similar to AA sequence:RefSeq:WP_013527180.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795398.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608466.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795394.1
COORDINATES: similar to AA sequence:RefSeq:WP_013455947.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004023946.1
COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795387.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949698.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023950.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511243.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456156.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283772.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886411.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683373.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023956.1
COORDINATES: similar to AA sequence:RefSeq:WP_020003153.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283777.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054593.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004795358.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796031.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283781.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796912.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608844.1
COORDINATES: protein motif:HMM:TIGR00647.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794686.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011283265.1
COORDINATES: similar to AA sequence:RefSeq:WP_020003094.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283263.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287250.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_020003097.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013354376.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608426.1
GO:0005515 - protein binding [Evidence IEA]
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795703.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795704.1
aspartyl/glutamyl-tRNA amidotransferase subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_004794593.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796221.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF015587.2
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886822.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796178.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_005683206.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004797039.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020003165.1
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796601.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013301991.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794260.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011949242.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF022018.2
COORDINATES: similar to AA sequence:RefSeq:WP_013455976.1
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_011283179.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_006608846.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949781.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_004024029.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796885.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886460.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_014829985.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_006608650.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_003226808.1
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:NF015280.2
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011206510.1
COORDINATES: protein motif:HMM:NF016085.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF014186.2
COORDINATES: similar to AA sequence:RefSeq:WP_005683961.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886182.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796054.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287264.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456552.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683343.1
COORDINATES: similar to AA sequence:RefSeq:WP_004418933.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013609033.1
COORDINATES: protein motif:HMM:TIGR00479.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_020003083.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_011283185.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608882.1
COORDINATES: similar to AA sequence:RefSeq:WP_004797043.1
COORDINATES: protein motif:HMM:TIGR02191.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054501.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004797041.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287704.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019887.2
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287133.1
COORDINATES: similar to AA sequence:RefSeq:WP_010321203.1
COORDINATES: similar to AA sequence:RefSeq:WP_012751316.1
COORDINATES: similar to AA sequence:RefSeq:WP_011290352.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054684.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054180.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054213.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283791.1
COORDINATES: protein motif:HMM:NF013772.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796847.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796440.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_006886527.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683924.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_004797150.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_013054685.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796788.1
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_015286905.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018367.2
P37-like ABC transporter substrate-binding lipoprotein
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011283211.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054539.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054446.1
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: similar to AA sequence:RefSeq:WP_020003168.1
COORDINATES: protein motif:HMM:NF012529.2
COORDINATES: protein motif:HMM:NF012915.2
COORDINATES: similar to AA sequence:RefSeq:WP_005683942.1
RNA-binding S4 domain-containing protein
COORDINATES: protein motif:HMM:NF024991.2
COORDINATES: similar to AA sequence:RefSeq:WP_004794107.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004428678.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015084189.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013022362.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795216.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004795217.1
COORDINATES: protein motif:HMM:NF016959.2
COORDINATES: similar to AA sequence:RefSeq:WP_005683764.1
COORDINATES: protein motif:HMM:NF013980.2
COORDINATES: similar to AA sequence:RefSeq:WP_004794092.1
COORDINATES: similar to AA sequence:RefSeq:WP_005684032.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283728.1
GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004420942.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283759.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054529.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795128.1
COORDINATES: protein motif:HMM:NF024582.2
transcription termination/antitermination protein NusA
COORDINATES: similar to AA sequence:RefSeq:WP_015287587.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283822.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796176.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014471.2
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024227.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886439.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794184.1
COORDINATES: protein motif:HMM:NF013514.2
COORDINATES: protein motif:HMM:NF012770.2
GO:0004177 - aminopeptidase activity [Evidence IEA]
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886738.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795236.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054519.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795222.1
COORDINATES: protein motif:HMM:NF021427.2
COORDINATES: similar to AA sequence:RefSeq:WP_006886462.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_011283506.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796954.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_006886872.1
putative DNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013729720.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283325.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796429.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024157.2
COORDINATES: similar to AA sequence:RefSeq:WP_013054472.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608739.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796855.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005683362.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_011283732.1
COORDINATES: protein motif:HMM:NF012356.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015084078.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683867.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_010321214.1
COORDINATES: protein motif:HMM:NF014691.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001047.0
Holliday junction branch migration protein RuvA
COORDINATES: protein motif:HMM:NF015736.2
COORDINATES: protein motif:HMM:NF024787.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
HNH endonuclease signature motif containing protein
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:NF016146.2
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054224.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00011
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: protein motif:HMM:NF017911.2
COORDINATES: similar to AA sequence:RefSeq:WP_011949555.1
COORDINATES: protein motif:HMM:NF005932.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008363077.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794463.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683458.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283278.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796630.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886890.1
GO:0004371 - glycerone kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02365.1
COORDINATES: protein motif:HMM:NF015567.2
GO:0047324 - phosphoenolpyruvate-glycerone phosphotransferase activity [Evidence IEA]
dihydroxyacetone kinase phosphoryl donor subunit DhaM
COORDINATES: protein motif:HMM:NF012455.2
COORDINATES: similar to AA sequence:RefSeq:WP_014579812.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886292.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011206153.1
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012751482.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024017.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794421.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795841.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886642.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886643.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886644.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015287328.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_013447480.1
COORDINATES: similar to AA sequence:RefSeq:WP_013729919.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794539.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683567.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683566.1
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012210.0
COORDINATES: similar to AA sequence:RefSeq:WP_011283557.1
COORDINATES: similar to AA sequence:RefSeq:WP_004419518.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002957.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013954658.1
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015287210.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794627.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886786.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005683250.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283326.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794607.1
COORDINATES: similar to AA sequence:RefSeq:WP_013021874.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_020002807.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796390.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794556.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796210.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354640.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005683090.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683906.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796013.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283519.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004418988.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015286928.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_013054377.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006886523.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456157.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608780.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_011283623.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_006886880.1
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010925162.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024299.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012892.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01494.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949494.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020002815.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608309.1
COORDINATES: similar to AA sequence:RefSeq:WP_020002819.1
COORDINATES: protein motif:HMM:NF022351.2
COORDINATES: protein motif:HMM:TIGR04526.1
putative immunoglobulin-blocking virulence protein
COORDINATES: similar to AA sequence:RefSeq:WP_011283345.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004797220.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004794842.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794844.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012560302.1
COORDINATES: protein motif:HMM:TIGR00497.1
GO:0019812 - type I site-specific deoxyribonuclease complex [Evidence IEA]
GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
HsdR family type I site-specific deoxyribonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_017698230.1
COORDINATES: similar to AA sequence:RefSeq:WP_006688977.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_005683308.1
COORDINATES: protein motif:HMM:TIGR02012.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024390.1
COORDINATES: protein motif:HMM:NF005518.0
COORDINATES: similar to AA sequence:RefSeq:WP_004796521.1
COORDINATES: protein motif:HMM:NF013660.2
COORDINATES: similar to AA sequence:RefSeq:WP_020003073.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025053.2
COORDINATES: protein motif:HMM:NF019334.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796044.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_015287067.1
COORDINATES: similar to AA sequence:RefSeq:WP_015545280.1
COORDINATES: similar to AA sequence:RefSeq:WP_013729713.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
FeoB-associated Cys-rich membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_020003016.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054454.1
DNA integrity scanning protein DisA nucleotide-binding domain protein
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_015287533.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287532.1
COORDINATES: protein motif:HMM:NF020123.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354989.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: similar to AA sequence:RefSeq:WP_013955046.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287686.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886329.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: protein motif:HMM:TIGR02397.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796660.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013212.2
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013768.2
heat-inducible transcriptional repressor HrcA
COORDINATES: similar to AA sequence:RefSeq:WP_015287631.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012730.2
GO:0006811 - ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015286924.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004023932.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004794370.1
COORDINATES: similar to AA sequence:RefSeq:WP_015286921.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004025773.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283714.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023937.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886396.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283717.1
COORDINATES: protein motif:HMM:NF023393.2
recombination protein O N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF021546.2
COORDINATES: protein motif:HMM:NF013408.2
COORDINATES: similar to AA sequence:RefSeq:WP_011290299.1
COORDINATES: protein motif:HMM:NF013539.2
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010321469.1
GO:0008801 - beta-phosphoglucomutase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354810.1
COORDINATES: similar to AA sequence:RefSeq:WP_014335437.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794311.1
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:NF013495.2
COORDINATES: similar to AA sequence:RefSeq:WP_004794772.1
DnaB-like helicase C-terminal domain-containing protein