Natrinema zhouii strain YPL30 plasmid unnamed2, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.
Natrinema sp. nov., isolated from salt mine at Yunnan province(Cui,H.-L.)
Submitted (30-SEP-2021) School of Food and Biological Engineering, Jiangsu University, No 301 Xuefu Road, Jingkou District, Zhenjiang, Zhenjiang, Jiangsu 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP084883.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: FALCON v. 0.3.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 219.0x\nSequencing Technology :: Illumina HiSeq; PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/09/2023 14:49:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,348\nCDSs (total) :: 5,285\nGenes (coding) :: 5,018\nCDSs (with protein) :: 5,018\nGenes (RNA) :: 63\nrRNAs :: 4, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 3, 3 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 2\nPseudo Genes (total) :: 267\nCDSs (without protein) :: 267\nPseudo Genes (ambiguous residues) :: 0 of 267\nPseudo Genes (frameshifted) :: 137 of 267\nPseudo Genes (incomplete) :: 172 of 267\nPseudo Genes (internal stop) :: 107 of 267\nPseudo Genes (multiple problems) :: 120 of 267\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_008002354.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006430798.1
COORDINATES: similar to AA sequence:RefSeq:WP_014053133.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005552800.1
COORDINATES: similar to AA sequence:RefSeq:WP_015320495.1
COORDINATES: protein motif:HMM:NF014662.2
COORDINATES: similar to AA sequence:RefSeq:WP_012941264.1
COORDINATES: similar to AA sequence:RefSeq:WP_005045028.1
COORDINATES: similar to AA sequence:RefSeq:WP_006181834.1
COORDINATES: similar to AA sequence:RefSeq:WP_006089236.1
COORDINATES: protein motif:HMM:NF012936.2
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007107559.1
COORDINATES: similar to AA sequence:RefSeq:WP_008015343.1
COORDINATES: similar to AA sequence:RefSeq:WP_008524907.1
COORDINATES: similar to AA sequence:RefSeq:WP_010904188.1
COORDINATES: similar to AA sequence:RefSeq:WP_006088220.1
COORDINATES: similar to AA sequence:RefSeq:WP_007143126.1
COORDINATES: similar to AA sequence:RefSeq:WP_005557042.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012871357.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182342.1
GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_008895855.1
COORDINATES: similar to AA sequence:RefSeq:WP_012942604.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041131.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007274178.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667408.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006433061.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006433060.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945888.1
COORDINATES: similar to AA sequence:RefSeq:WP_007698828.1
COORDINATES: similar to AA sequence:RefSeq:WP_008582451.1
COORDINATES: protein motif:HMM:NF016817.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006183343.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008006093.1
COORDINATES: similar to AA sequence:RefSeq:WP_006109864.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007742042.1
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004971363.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004518753.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008892657.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012942233.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012942232.1
COORDINATES: similar to AA sequence:RefSeq:WP_006826709.1
COORDINATES: similar to AA sequence:RefSeq:WP_008896570.1
COORDINATES: similar to AA sequence:RefSeq:WP_008896569.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008896568.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006664530.1
COORDINATES: similar to AA sequence:RefSeq:WP_006673136.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_008896565.1
COORDINATES: similar to AA sequence:RefSeq:WP_008896564.1
COORDINATES: similar to AA sequence:RefSeq:WP_006664526.1
COORDINATES: similar to AA sequence:RefSeq:WP_008896562.1
COORDINATES: similar to AA sequence:RefSeq:WP_008896561.1
COORDINATES: similar to AA sequence:RefSeq:WP_008896560.1
COORDINATES: similar to AA sequence:RefSeq:WP_008896559.1
COORDINATES: similar to AA sequence:RefSeq:WP_012944409.1
COORDINATES: similar to AA sequence:RefSeq:WP_008443411.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008421826.1
DUF2080 family transposase-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_011572751.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006430241.1
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: similar to AA sequence:RefSeq:WP_015896016.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091860.1
COORDINATES: similar to AA sequence:RefSeq:WP_017344467.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945579.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_006824350.1
TrmB family transcriptional regulator sugar-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006663839.1
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015788592.1
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: similar to AA sequence:RefSeq:WP_008419959.1
COORDINATES: similar to AA sequence:RefSeq:WP_008896505.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388115.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008892374.1
COORDINATES: similar to AA sequence:RefSeq:WP_006181124.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013875927.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875746.1
COORDINATES: similar to AA sequence:RefSeq:WP_006181120.1
TetR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004517367.1
COORDINATES: similar to AA sequence:RefSeq:WP_006432975.1
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006182242.1
transcription initiation factor IIB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006186391.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011222528.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008368216.1
COORDINATES: similar to AA sequence:RefSeq:WP_015409529.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008421961.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945842.1
COORDINATES: similar to AA sequence:RefSeq:WP_005538179.1
GO:0016787 - hydrolase activity [Evidence IEA]
Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26.; frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: protein motif:HMM:NF014868.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004973584.1
COORDINATES: similar to AA sequence:RefSeq:WP_012942203.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006165382.1
COORDINATES: similar to AA sequence:RefSeq:WP_006092047.1
COORDINATES: protein motif:HMM:NF036897.2
COORDINATES: similar to AA sequence:RefSeq:WP_006106684.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004216386.1
COORDINATES: similar to AA sequence:RefSeq:WP_012943784.1
COORDINATES: protein motif:HMM:NF016811.2
COORDINATES: protein motif:HMM:NF012464.2
GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012945131.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107317.1
COORDINATES: protein motif:HMM:TIGR00455.1
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014863972.1
COORDINATES: similar to AA sequence:RefSeq:WP_006666783.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008894298.1
COORDINATES: similar to AA sequence:RefSeq:WP_007575360.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008451517.1
COORDINATES: similar to AA sequence:RefSeq:WP_013876032.1
COORDINATES: similar to AA sequence:RefSeq:WP_012946183.1
COORDINATES: similar to AA sequence:RefSeq:WP_006187070.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012946187.1
COORDINATES: similar to AA sequence:RefSeq:WP_006665509.1
COORDINATES: similar to AA sequence:RefSeq:WP_013879967.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_013879968.1
GO:0005215 - transporter activity [Evidence IEA]
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013879969.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014462954.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009376680.1
COORDINATES: similar to AA sequence:RefSeq:WP_008425130.1
COORDINATES: similar to AA sequence:RefSeq:WP_005558864.1
GO:0003824 - catalytic activity [Evidence IEA]
phosphoadenosine phosphosulfate reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008423844.1
COORDINATES: similar to AA sequence:RefSeq:WP_008443531.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009762187.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006433280.1
GO:0008150 - biological_process [Evidence IEA]
TIGR03557 family F420-dependent LLM class oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008388471.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006651785.1
COORDINATES: similar to AA sequence:RefSeq:WP_009488264.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_006667057.1
COORDINATES: similar to AA sequence:RefSeq:WP_006111160.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825923.1
COORDINATES: similar to AA sequence:RefSeq:WP_012942443.1
COORDINATES: similar to AA sequence:RefSeq:WP_006111155.1
COORDINATES: similar to AA sequence:RefSeq:WP_007259451.1
COORDINATES: similar to AA sequence:RefSeq:WP_006433327.1
COORDINATES: similar to AA sequence:RefSeq:WP_007108472.1
COORDINATES: similar to AA sequence:RefSeq:WP_006111143.1
COORDINATES: similar to AA sequence:RefSeq:WP_006648274.1
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006111141.1
COORDINATES: similar to AA sequence:RefSeq:WP_015298873.1
COORDINATES: similar to AA sequence:RefSeq:WP_008317683.1
COORDINATES: similar to AA sequence:RefSeq:WP_008162587.1
COORDINATES: similar to AA sequence:RefSeq:WP_006089616.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008012644.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182335.1
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006561984.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886002.1
COORDINATES: protein motif:HMM:NF014795.2
COORDINATES: similar to AA sequence:RefSeq:WP_019152975.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885371.1
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0016866 - intramolecular transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018258186.1
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
cobalamin B12-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008443074.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:NF024880.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008311156.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013706.2
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: similar to AA sequence:RefSeq:WP_008388092.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_006090357.1
COORDINATES: similar to AA sequence:RefSeq:WP_007276364.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_015319557.1
COORDINATES: similar to AA sequence:RefSeq:WP_006065366.1
COORDINATES: similar to AA sequence:RefSeq:WP_006077817.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004214123.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0047988 - hydroxyacid-oxoacid transhydrogenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015322117.1
COORDINATES: similar to AA sequence:RefSeq:WP_005558268.1
COORDINATES: similar to AA sequence:RefSeq:WP_015322114.1
COORDINATES: similar to AA sequence:RefSeq:WP_005558266.1
COORDINATES: similar to AA sequence:RefSeq:WP_015322112.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007143238.1
COORDINATES: similar to AA sequence:RefSeq:WP_015322111.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008015142.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945194.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945895.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945783.1
COORDINATES: protein motif:HMM:NF015012.2
COORDINATES: similar to AA sequence:RefSeq:WP_008893067.1
COORDINATES: similar to AA sequence:RefSeq:WP_008893068.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945410.1
COORDINATES: similar to AA sequence:RefSeq:WP_008892404.1
COORDINATES: similar to AA sequence:RefSeq:WP_008892395.1
COORDINATES: similar to AA sequence:RefSeq:WP_007260857.1
Zn-ribbon domain-containing OB-fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_007260856.1
COORDINATES: similar to AA sequence:RefSeq:WP_015298770.1
COORDINATES: similar to AA sequence:RefSeq:WP_006823973.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107331.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107353.1
COORDINATES: similar to AA sequence:RefSeq:WP_013493837.1
COORDINATES: similar to AA sequence:RefSeq:WP_006823980.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667524.1
COORDINATES: similar to AA sequence:RefSeq:WP_020753762.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274152.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107339.1
COORDINATES: similar to AA sequence:RefSeq:WP_006823983.1
COORDINATES: similar to AA sequence:RefSeq:WP_006823984.1
COORDINATES: similar to AA sequence:RefSeq:WP_007276359.1
COORDINATES: similar to AA sequence:RefSeq:WP_008892408.1
COORDINATES: similar to AA sequence:RefSeq:WP_020221247.1
COORDINATES: similar to AA sequence:RefSeq:WP_007260860.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006107347.1
COORDINATES: similar to AA sequence:RefSeq:WP_015299360.1
COORDINATES: similar to AA sequence:RefSeq:WP_008892388.1
COORDINATES: similar to AA sequence:RefSeq:WP_007141087.1
COORDINATES: similar to AA sequence:RefSeq:WP_009761042.1
COORDINATES: similar to AA sequence:RefSeq:WP_007141089.1
COORDINATES: similar to AA sequence:RefSeq:WP_007141090.1
COORDINATES: similar to AA sequence:RefSeq:WP_007141091.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014050646.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009761045.1
COORDINATES: similar to AA sequence:RefSeq:WP_007141094.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_011571209.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007141096.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886010.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009367317.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
nucleobase:cation symporter-2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009367320.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367327.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007141102.1
COORDINATES: similar to AA sequence:RefSeq:WP_007141103.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367319.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008007373.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008366679.1
COORDINATES: similar to AA sequence:RefSeq:WP_008366680.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825708.1
GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012942740.1
COORDINATES: similar to AA sequence:RefSeq:WP_008426020.1
COORDINATES: similar to AA sequence:RefSeq:WP_011572798.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016530 - metallochaperone activity [Evidence IEA]
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012942743.1
GO:0016151 - nickel cation binding [Evidence IEA]; GO:0009039 - urease activity [Evidence IEA]
GO:0043419 - urea catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006666930.1
COORDINATES: similar to AA sequence:RefSeq:WP_006433033.1
GO:0035550 - urease complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF013742.2
COORDINATES: similar to AA sequence:RefSeq:WP_008446344.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945391.1
COORDINATES: similar to AA sequence:RefSeq:WP_007107532.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_006433144.1
COORDINATES: protein motif:HMM:NF018190.2
carbohydrate-binding family 9-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_008892480.1
COORDINATES: similar to AA sequence:RefSeq:WP_006433145.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067313.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158999.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667841.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008006250.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667671.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008895861.1
COORDINATES: similar to AA sequence:RefSeq:WP_006433150.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008895859.1
COORDINATES: similar to AA sequence:RefSeq:WP_008006303.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024751.2
COORDINATES: protein motif:HMM:NF024980.2
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006825650.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182271.1
COORDINATES: similar to AA sequence:RefSeq:WP_005043131.1
COORDINATES: similar to AA sequence:RefSeq:WP_007997798.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041059.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097146.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061665.1
GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006667827.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006653003.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825564.1
COORDINATES: similar to AA sequence:RefSeq:WP_014824910.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006433152.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762056.1
COORDINATES: similar to AA sequence:RefSeq:WP_012944975.1
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041044.1
COORDINATES: similar to AA sequence:RefSeq:WP_008892457.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875783.1
COORDINATES: similar to AA sequence:RefSeq:WP_012944980.1
COORDINATES: protein motif:HMM:NF024627.2
COORDINATES: similar to AA sequence:RefSeq:WP_008892461.1
COORDINATES: similar to AA sequence:RefSeq:WP_013881474.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667776.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388588.1
GO:0004650 - polygalacturonase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025563.2
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013875738.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107009.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875736.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013875735.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875734.1
COORDINATES: similar to AA sequence:RefSeq:WP_008892463.1
COORDINATES: similar to AA sequence:RefSeq:WP_008422532.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_006187379.1
COORDINATES: similar to AA sequence:RefSeq:WP_006106897.1
COORDINATES: similar to AA sequence:RefSeq:WP_008528255.1
COORDINATES: similar to AA sequence:RefSeq:WP_006652998.1
COORDINATES: similar to AA sequence:RefSeq:WP_015408557.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214470.1
COORDINATES: similar to AA sequence:RefSeq:WP_006088758.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007694562.1
COORDINATES: similar to AA sequence:RefSeq:WP_004596713.1
COORDINATES: similar to AA sequence:RefSeq:WP_007996706.1
COORDINATES: similar to AA sequence:RefSeq:WP_004216596.1
COORDINATES: similar to AA sequence:RefSeq:WP_006824928.1
COORDINATES: similar to AA sequence:RefSeq:WP_007139993.1
COORDINATES: similar to AA sequence:RefSeq:WP_008367669.1
COORDINATES: similar to AA sequence:RefSeq:WP_013440781.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015911271.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388147.1
COORDINATES: similar to AA sequence:RefSeq:WP_010903705.1
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006076729.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008422418.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107231.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107229.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107227.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107226.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825723.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825722.1
COORDINATES: similar to AA sequence:RefSeq:WP_006666936.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006667631.1
COORDINATES: similar to AA sequence:RefSeq:WP_006054760.1
COORDINATES: protein motif:HMM:NF025030.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004977793.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825783.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825784.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825785.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667656.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825781.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667650.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013126.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006825793.1
COORDINATES: similar to AA sequence:RefSeq:WP_015761916.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667643.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825790.1
COORDINATES: similar to AA sequence:RefSeq:WP_018259050.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825795.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165968.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_006667637.1
COORDINATES: similar to AA sequence:RefSeq:WP_004216286.1
GO:0047420 - N-acyl-D-amino-acid deacylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006825788.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019552.2
COORDINATES: similar to AA sequence:RefSeq:WP_006825657.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006667648.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF013567.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006667638.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825798.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945491.1
COORDINATES: similar to AA sequence:RefSeq:WP_008524786.1,RefSeq:WP_010890501.1
COORDINATES: similar to AA sequence:RefSeq:WP_008454090.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159004.1
COORDINATES: similar to AA sequence:RefSeq:WP_008454092.1
COORDINATES: similar to AA sequence:RefSeq:WP_014864005.1
acyl CoA:acetate/3-ketoacid CoA transferase
COORDINATES: similar to AA sequence:RefSeq:WP_007107456.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008159009.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190350.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067322.1
COORDINATES: similar to AA sequence:RefSeq:WP_008012645.1
COORDINATES: similar to AA sequence:RefSeq:WP_005578658.1
COORDINATES: similar to AA sequence:RefSeq:WP_006066616.1
COORDINATES: protein motif:HMM:NF025736.2
COORDINATES: similar to AA sequence:RefSeq:WP_006433252.1
glycosyl hydrolase family 28-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_004216116.1
COORDINATES: similar to AA sequence:RefSeq:WP_013440732.1
COORDINATES: similar to AA sequence:RefSeq:WP_019917211.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021127.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
GO:0045227 - capsule polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012843258.1
GO:0004333 - fumarate hydratase activity [Evidence IEA]
GO:0006106 - fumarate metabolic process [Evidence IEA]; GO:0006108 - malate metabolic process [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF015905.2
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: protein motif:HMM:NF015411.2
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012904.2
COORDINATES: similar to AA sequence:RefSeq:WP_020200604.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367360.1
COORDINATES: similar to AA sequence:RefSeq:WP_004598745.1
COORDINATES: similar to AA sequence:RefSeq:WP_004599872.1
COORDINATES: similar to AA sequence:RefSeq:WP_008165092.1
COORDINATES: similar to AA sequence:RefSeq:WP_007261073.1
COORDINATES: similar to AA sequence:RefSeq:WP_008416698.1
COORDINATES: similar to AA sequence:RefSeq:WP_007992622.1
COORDINATES: similar to AA sequence:RefSeq:WP_007261068.1
COORDINATES: similar to AA sequence:RefSeq:WP_015911260.1
COORDINATES: protein motif:HMM:NF012791.2