Chryseobacterium glaciei strain IHBB 10212 plasmid pMP02, complete sequence.
type: Entry
definition: Chryseobacterium glaciei strain IHBB 10212 plasmid pMP02, complete sequence.
sequence version: NZ_CP015201.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP015201.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04524003
keyword: RefSeq
source: Chryseobacterium glaciei
organism: Chryseobacterium glaciei
taxonomy: Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Chryseobacterium group; Chryseobacterium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP015201.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2.0\nAssembly Name :: Chryseobacterium sp. IHBB 10212\nGenome Coverage :: 90\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 22:14:27\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,418\nCDSs (total) :: 4,314\nGenes (coding) :: 4,293\nCDSs (with protein) :: 4,293\nGenes (RNA) :: 104\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 80\nncRNAs :: 3\nPseudo Genes (total) :: 21\nCDSs (without protein) :: 21\nPseudo Genes (ambiguous residues) :: 0 of 21\nPseudo Genes (frameshifted) :: 11 of 21\nPseudo Genes (incomplete) :: 7 of 21\nPseudo Genes (internal stop) :: 9 of 21\nPseudo Genes (multiple problems) :: 5 of 21\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 11450
topology: circular
so has quality: SO_0000988
location: 1..11450
location: region:1-11450:1
RO_0002162: 1685010

NZ_CP015201
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04524003
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequence of Chryseobacterium sp. IHBB 10212
author: Pal, M.
author: Swarnkar, M.K.
author: Kaushal, K.
author: Chhibber, S.
author: Singh, A.K.
author: Gulati, A.
journal: Unpublished

2
title: Direct Submission
author: Pal, M.
author: Swarnkar, M.K.
author: Kaushal, K.
author: Chhibber, S.
author: Singh, A.K.
author: Gulati, A.
journal: Submitted (11-APR-2016) Biotechnology, CSIR-Institute of Himalayan Bioresource Technology, Post Box No.6, Palampur, HP 176061, India

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11450:1
position: 11450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11450:1:source
so part of: sequence
organism: Chryseobacterium glaciei
mol type: genomic DNA
strain: IHBB 10212
isolation source: glacier from Lahual Spiti valley
culture collection: MTCC:12457
type material: type strain of Chryseobacterium glaciei
plasmid: pMP02
country: India:Glacier at Lahual Spiti, Himachal Pradesh
lat lon: 32.23 N 77.37 E
altitude: 4640 m
collection date: 2011-09-28
collected by: Mohinder Pal
identified by: Mohinder Pal

1685010
type: Taxonomy
SIO_000068: taxonomy

A0O34_RS21970
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS21970
old locus tag: A0O34_21960
so part of: sequence
location: join(11402..11450,1..485)
location: region:1-11450:1
so has part: feature:11402-11450:1:exon
so has part: feature:1-485:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:11402-11450:1:exon

position:11402:1
position: 11402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-485:1:exon

position:485:1
position: 485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

A0O34_RS21970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS21970
old locus tag: A0O34_21960
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSTPLETLTFFSSFFYIDAACTPFVILPQSTNAGNNTGIVFQPNPGTGIGVLGPDITLCSSKLPIVLDGSAFMPGINSKVQWSNAGTGEMLGNEIKQTISTGGTYRIKVEYGENCSVTDDIVIQSNPKADAGDIIAPSVNNCSGKKSMILTAALSISSTIIHPFLPGMMMFRSTIR
SIO_010081: A0O34_RS21970
subclass of: SO_0000673
so part of: A0O34_RS21970
location: join(11402..11450,1..485)
location: region:1-11450:1
so has part: feature:11402-11450:1:exon
so has part: feature:1-485:1:exon

WP_066759959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11402-11450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-485:1:exon

A0O34_RS21975
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS21975
old locus tag: A0O34_21965
so part of: sequence
location: 377..1639
location: region:377-1639:1
so has part: feature:377-1639:1:exon
subclass of: SO_0000010

position:377:1
position: 377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1639:1
position: 1639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377-1639:1:exon

A0O34_RS21975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS21975
old locus tag: A0O34_21965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQWKKKHDFNSSLIHFQHHNTSFFTWYDDVSQHHTLGTGATFQVSPVTKRSYWVTVKGDNACESAVKEVEVTFENLAAPIVTVSQPTCTHATGSIDITPKERVTYSINAGTYSINAHYDLAEGVYSITAQNAEGCTSEPVYITINPQPILPTAAIRYSSNEFQAIGTTEVIQTGQTGGVYTASPVGLIIDAATGTLDLEHSVPDQLYQVTYTFTNGFCSSNISTTIRINSTPAAINYPLLDYCAIGTVNIARTGPAGGKYTANSSALKIDELTGTIDLSKSLAGRYIITYTYMDGSIESKTTTIITINDLPVITITSSAGTAISKGQSASLTATGGTSYAWIGPNIISGQNTGTIQIKPSVTATYTAIVTNSSGCTEVMDLLIEVSEVSALIPNNVVTPNGDGKNDTWIIRNLSNIPITK
SIO_010081: A0O34_RS21975
subclass of: SO_0000673
so part of: A0O34_RS21975
location: 377..1639
location: region:377-1639:1
so has part: feature:377-1639:1:exon

WP_066759954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377-1639:1:exon

A0O34_RS22725
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS22725
old locus tag: A0O34_21970
so part of: sequence
location: 1900..2199
location: region:1900-2199:1
so has part: feature:1900-2199:1:exon
subclass of: SO_0000010

position:1900:1
position: 1900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2199:1
position: 2199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1900-2199:1:exon

A0O34_RS22725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS22725
old locus tag: A0O34_21970
inference: COORDINATES: protein motif:HMM:NF023179.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IX secretion system membrane protein PorP/SprF
translation: MKTIKYIMIAAGILLMSKTYAQLNPMGSTYFQNQYLANPAMAGIQQDWKVNVGYKVQWTAIEGAPTMQAVTADYEQSERKLGSALIFTMKMRVLSFEPV
SIO_010081: A0O34_RS22725
subclass of: SO_0000673
so part of: A0O34_RS22725
location: 1900..2199
location: region:1900-2199:1
so has part: feature:1900-2199:1:exon

WP_066759955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1900-2199:1:exon

A0O34_RS22695
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS22695
pseudo: true
so part of: sequence
location: 2181..2768
location: region:2181-2768:1
so has part: feature:2181-2768:1:exon
subclass of: SO_0000010

position:2181:1
position: 2181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2768:1
position: 2768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2181-2768:1:exon

A0O34_RS22695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS22695
inference: COORDINATES: protein motif:HMM:NF023179.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type IX secretion system membrane protein PorP/SprF
SIO_010081: A0O34_RS22695
subclass of: SO_0000673
so part of: A0O34_RS22695
location: 2181..2768
location: region:2181-2768:1
so has part: feature:2181-2768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2181-2768:1:exon

A0O34_RS21990
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS21990
old locus tag: A0O34_21980
so part of: sequence
location: complement(3385..3897)
location: region:3385-3897:-1
so has part: feature:3385-3897:-1:exon
subclass of: SO_0000010

position:3385:-1
position: 3385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3897:-1
position: 3897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3385-3897:-1:exon

A0O34_RS21990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS21990
old locus tag: A0O34_21980
inference: COORDINATES: protein motif:HMM:NF012655.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MAICLYNLMQMTRKTTSGPIRDKERTKMKLLTAVGVILKKEGFTGLNVSRVATKANLHRKLIYEYFGGMENLVKEYLNSRDYWSISLDQIDEIIEESKKDFGKKTALSLLENQFDSLMANEEMRKIINWGLSEDLKPLKELNKERNVWVRSYSLRSPTIILKIVRKISGQ
SIO_010081: A0O34_RS21990
subclass of: SO_0000673
so part of: A0O34_RS21990
location: complement(3385..3897)
location: region:3385-3897:-1
so has part: feature:3385-3897:-1:exon

WP_228394399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3385-3897:-1:exon

A0O34_RS21995
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS21995
old locus tag: A0O34_21985
so part of: sequence
location: complement(4148..4354)
location: region:4148-4354:-1
so has part: feature:4148-4354:-1:exon
subclass of: SO_0000010

position:4148:-1
position: 4148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4354:-1
position: 4354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4148-4354:-1:exon

A0O34_RS21995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS21995
old locus tag: A0O34_21985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAVAFMPTSSNAQSKSNNAISSRPKQPTNALAAWAEGYEYGMSHGWGQADSLYWAHVQMQIWINHNS
SIO_010081: A0O34_RS21995
subclass of: SO_0000673
so part of: A0O34_RS21995
location: complement(4148..4354)
location: region:4148-4354:-1
so has part: feature:4148-4354:-1:exon

WP_157886129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4148-4354:-1:exon

A0O34_RS22000
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS22000
old locus tag: A0O34_21990
so part of: sequence
location: 4742..5098
location: region:4742-5098:1
so has part: feature:4742-5098:1:exon
subclass of: SO_0000010

position:4742:1
position: 4742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5098:1
position: 5098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4742-5098:1:exon

A0O34_RS22000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS22000
old locus tag: A0O34_21990
inference: COORDINATES: protein motif:HMM:NF012301.2
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MKKKVVLIQDNQDILDIMDHVLTEEGYDVTPSLTTKPIDNIDEIKPDVVIVDDHIKGNKKGSEVIEELKSDTETEDLSAVLTSTSPDVPKKAKECKADDYIEKPFDIDQMIEVVKKNA
SIO_010081: A0O34_RS22000
subclass of: SO_0000673
so part of: A0O34_RS22000
location: 4742..5098
location: region:4742-5098:1
so has part: feature:4742-5098:1:exon

WP_066759942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4742-5098:1:exon

A0O34_RS22005
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS22005
old locus tag: A0O34_21995
so part of: sequence
location: complement(5136..9119)
location: region:5136-9119:-1
so has part: feature:5136-9119:-1:exon
subclass of: SO_0000010

position:5136:-1
position: 5136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9119:-1
position: 9119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5136-9119:-1:exon

A0O34_RS22005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS22005
old locus tag: A0O34_21995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018675580.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helicase-related protein
translation: MQVQDISAKTTGTSPVNNNQQINSKSKTSLGDLFSNVNANTQNETGLVTSSLPQPGVYTGTIRSFHRNDCLVTNHGQVGYLKDLNKENGKAMFHPLSLPTAQKAKAEAYILVRDTYIDLYEKEAEQQTEHKPERETLNKLYDAFIKRYGNLNAAENIKLIKTDAAGKEIPYLERVVGGVVHKADIFHRPVSFSTTTLATNNPDEALAASLNRYGNVNLSYMSQISDMAAEDLKDSLHGRIFYNPLTQEYDISERWVSGNVVEKAKELEAYLDHHPDDKEAKESLAALQEAKPRQIEFEELDFNLGERWIPTGIYERFASHLFDTEVRIHYTENTDDFSIKCDQKNAHIRDKYAIKSESRTYDGITLLKNALVNTTPDITKKVTIGDQEVKVRDMEAIQMANSKIDEIRKAFTDWLHDQNDEFKKRLTDKYNDTFNCFVRPQYDGSHQDFPGLDRKALGIEDLYSSQKDAVWMIKLNNGAICDHEVGAGKTLIMCTAAQEMKRLGLAHKPMVIGLKANVHEIAEIYRTAYPHAKILYPGKEDFTPQKRLRIFGDIKNNDWDCIILTHDQFGMIPQSPELQKEILQIELNSVEENLSALQAQGSEISRAMLKGVLIRKQNLEVKLKTLEHDIENRKDDVVDFKMMGIDHLLVDESHRFKNLMFNTRHDRVAGLGNMQGSQKALNLLFAIRTIQERTGKDMGATFLSGTTISNSLTELYLLFKYLRPQALEKQGITCFDAWAAIYARKTTDYEFSVANNIVQKERFRYFIKVPELAQFYSEITDYRTAKDIGIDRPEKNEILYNIPPTPQQEAFIKKLMEFAKTGNATLLGRAPLSKSEEKAKMLIATDYARKMSLDMRMISQEYEDHPDSKASHCAATIAKYYKKFNAQKGTQFVFSDLGTYKPEVWNVYSEIKRKLVEDHGIPAQEIRFIQEAKNDTQRREFIRWMNEGKIRVLFGSTDMLGTGVNAQKRAVAIHHLDTPWRPSDLAQRDGRAIRKGNEIAKFFAENIVDVIIYAVEKSLDSYKFNLLYNKQLFIDQLKNNSLGKRTIDEGSMDEKSGMNFSEYVAILSGNTELLEKAKLEKQIAGLESERQAFNRSKFTSKYKLEDMTATVEAIKSRLDRMKLDWNNLEKRLEKNQDGVVLNPIKLLGLAADAEVKHVGMTLGEISKKARTGGEYEEIGSLYGFTLLVKTEISKKEDTEIKLNKFFVMGESNIKYTYNNGMMASEPKLAAMNFLSALEKIPGLMREEQKKADELERDLPVLREVVESTWSKEHKLSELKTELSAMERQIQLSIADKEERAPAPEGQAVETDDDKNKEMNAPHIKVKL
SIO_010081: A0O34_RS22005
subclass of: SO_0000673
so part of: A0O34_RS22005
location: complement(5136..9119)
location: region:5136-9119:-1
so has part: feature:5136-9119:-1:exon

WP_082891277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5136-9119:-1:exon

A0O34_RS22710
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS22710
so part of: sequence
location: complement(9154..9408)
location: region:9154-9408:-1
so has part: feature:9154-9408:-1:exon
subclass of: SO_0000010

position:9154:-1
position: 9154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9408:-1
position: 9408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9154-9408:-1:exon

A0O34_RS22710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS22710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNLLYRFQATPQITPPVTETVPTKKEKQDGGTSTHIPAKSEVQLSLFDLFENEGSAIDVAKKYQNKKVTGSTKENHNKEKNIQ
SIO_010081: A0O34_RS22710
subclass of: SO_0000673
so part of: A0O34_RS22710
location: complement(9154..9408)
location: region:9154-9408:-1
so has part: feature:9154-9408:-1:exon

WP_082891278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9154-9408:-1:exon

A0O34_RS22715
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS22715
so part of: sequence
location: complement(9472..10029)
location: region:9472-10029:-1
so has part: feature:9472-10029:-1:exon
subclass of: SO_0000010

position:9472:-1
position: 9472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10029:-1
position: 10029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9472-10029:-1:exon

A0O34_RS22715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS22715
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MKRFLTVRKKSTMLLPVIYLLAILCFDLSFSRGGDEAKKQATRSIHNYFFLKGSDMLREGGILAFITSQGVLNSPKNEPIRRALMRDCNLVSAVRLPNNLFTEHAGTEVGSDLIILQKNSLKHGVSEAEELFCESRLTEYQTTGNAFFHDNKRIIHTSSVLGTDPYGQPALSTLTKMVWGALQVT
SIO_010081: A0O34_RS22715
subclass of: SO_0000673
so part of: A0O34_RS22715
location: complement(9472..10029)
location: region:9472-10029:-1
so has part: feature:9472-10029:-1:exon

WP_157886133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9472-10029:-1:exon

A0O34_RS22230
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS22230
pseudo: true
so part of: sequence
location: complement(10541..10975)
location: region:10541-10975:-1
so has part: feature:10541-10975:-1:exon
subclass of: SO_0000010

position:10541:-1
position: 10541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10975:-1
position: 10975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10541-10975:-1:exon

A0O34_RS22230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS22230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002981559.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1896 domain-containing protein
SIO_010081: A0O34_RS22230
subclass of: SO_0000673
so part of: A0O34_RS22230
location: complement(10541..10975)
location: region:10541-10975:-1
so has part: feature:10541-10975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10541-10975:-1:exon

A0O34_RS22010
type: Gene
subclass of: SO_0000704
RO_0002162: 1685010
locus tag: A0O34_RS22010
old locus tag: A0O34_22000
so part of: sequence
location: 11124..11300
location: region:11124-11300:1
so has part: feature:11124-11300:1:exon
subclass of: SO_0000010

position:11124:1
position: 11124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11300:1
position: 11300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11124-11300:1:exon

A0O34_RS22010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1685010
locus tag: A0O34_RS22010
old locus tag: A0O34_22000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009086192.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histone H1
translation: MKELLEKISAELEKFKADADLQAEKGNKAAGTRARKSALELSKLFKEFRKVSVDEAKK
SIO_010081: A0O34_RS22010
subclass of: SO_0000673
so part of: A0O34_RS22010
location: 11124..11300
location: region:11124-11300:1
so has part: feature:11124-11300:1:exon

WP_066749871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11124-11300:1:exon