Bifidobacterium breve strain BR3 plasmid pBR3, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
Complete genome sequence of Bifidobacterium breve BR3
Submitted (29-DEC-2014) Department of Systems Biology, Yonsei University, Yonsei-ro, Seoul, Seodaemun-gu 120-749, Republic of Korea
REFSEQ INFORMATION: The reference sequence is identical to\nCP010414.1.\nSource DNA is available from Jihyun F. Kim (jfk1@yonsei.ac.kr);\nSource bacteria available from Jae-Gu Seo (jgseo@cellbiotech.com).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT pipe v. Aug 2014\nGenome Coverage :: 115.32x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 18:13:17\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,176\nCDSs (total) :: 2,109\nGenes (coding) :: 2,037\nCDSs (with protein) :: 2,037\nGenes (RNA) :: 67\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 3\nPseudo Genes (total) :: 72\nCDSs (without protein) :: 72\nPseudo Genes (ambiguous residues) :: 0 of 72\nPseudo Genes (frameshifted) :: 27 of 72\nPseudo Genes (incomplete) :: 53 of 72\nPseudo Genes (internal stop) :: 6 of 72\nPseudo Genes (multiple problems) :: 13 of 72\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_008783733.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008783728.1
COORDINATES: similar to AA sequence:RefSeq:WP_008783729.1
COORDINATES: similar to AA sequence:RefSeq:WP_008783730.1
COORDINATES: similar to AA sequence:RefSeq:WP_008783731.1
COORDINATES: similar to AA sequence:RefSeq:WP_007056228.1