Herbinix luporum strain SD1D chromosome I, complete sequence.
type: Entry
definition: Herbinix luporum strain SD1D chromosome I, complete sequence.
sequence version: NZ_LN879430.1
sequence date: 2023-04-13
sequence: sequence
division: CON
label: NZ_LN879430.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA3518679
keyword: RefSeq
source: Herbinix luporum
organism: Herbinix luporum
taxonomy: Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae; Herbinix.
reference: 1
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLN879430.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/13/2023 03:25:59\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,438\nCDSs (total) :: 2,369\nGenes (coding) :: 2,324\nCDSs (with protein) :: 2,324\nGenes (RNA) :: 69\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 4\nPseudo Genes (total) :: 45\nCDSs (without protein) :: 45\nPseudo Genes (ambiguous residues) :: 0 of 45\nPseudo Genes (frameshifted) :: 10 of 45\nPseudo Genes (incomplete) :: 36 of 45\nPseudo Genes (internal stop) :: 6 of 45\nPseudo Genes (multiple problems) :: 6 of 45\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 2609352
topology: circular
so has quality: SO_0000988
location: 1..2609352
location: region:1-2609352:1
RO_0002162: 1679721

NZ_LN879430
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA3518679
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Wibberg, Daniel.
journal: Submitted (01-SEP-2015) CEBITEC, Genome Research of Industrial Microorganisms (GRIM), Universitaetsstrasse 27, 33615, NRW, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2609352:1
position: 2609352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2609352:1:source
so part of: sequence
organism: Herbinix luporum
mol type: genomic DNA
strain: SD1D
isolation source: soil
type material: type strain of Herbinix luporum
chromosome: I
country: Germany
collection date: 2014

1679721
type: Taxonomy
SIO_000068: taxonomy

SD1D_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: dnaA
locus tag: SD1D_RS00005
old locus tag: SD1D_0001
so part of: sequence
location: 1..1350
location: region:1-1350:1
so has part: feature:1-1350:1:exon
subclass of: SO_0000010

position:1350:1
position: 1350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1350:1:exon

SD1D_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: dnaA
locus tag: SD1D_RS00005
old locus tag: SD1D_0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002569306.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MKNIIEEKWDEILQYLISEYGITDVSYNTWLKPLKVYDVKDHVITILINDERIGPPSLNVIRNKYELLLKVSIEEIMNDPYEIKFVLASQMESIERNAKIPSGDNKIVPNFLNPRYTFDTFVVGGNNEFARAAALAVAENPGEIYNPLFIYGGVGLGKTHLMHSIAHFVLNQNPDMKVLYVTSEKFTNELIDAIQKKTTTHFREKYRSIDILLIDDIQFIIGKESTQEEFFHTFNTLHESKRQIIISSDRPPKEMLTLEDRLRSRFEHGLMADIQSPDYETRMAILKKKEELDGYSIDEEVLKYIATNIKSNIRELEGALTKIVAFSRLKKRELNLELAIEALQDIISPNEKKVITPDLIVDIVAEHFNISPADIYSKDKSRAISYPRQIVMYLCRRLTELSVTEIGKALGNRDHSTVIHGCDKISKDIQKDTSIHNTVDVLIKKINPE
SIO_010081: SD1D_RS00005
subclass of: SO_0000673
so part of: SD1D_RS00005
location: 1..1350
location: region:1-1350:1
so has part: feature:1-1350:1:exon

WP_058257034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1350:1:exon

SD1D_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: dnaN
locus tag: SD1D_RS00010
old locus tag: SD1D_0002
so part of: sequence
location: 1610..2719
location: region:1610-2719:1
so has part: feature:1610-2719:1:exon
subclass of: SO_0000010

position:1610:1
position: 1610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2719:1
position: 2719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610-2719:1:exon

SD1D_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: dnaN
locus tag: SD1D_RS00010
old locus tag: SD1D_0002
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009263552.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKIRCQKSDLLNSVNIVLKAVPTKTTMPILECLIIEANNYGIKLIANDMELGIETMVKGTIMEEGIVALNAKVFSEIVRRLPENEVYISVDENYTTEIICEKAKFAISGRSGDEFPSLQEVERENPLTLSQFTLKEVIRQTVFSISDNESNKIMTGELFDIKNNELRVISLDGHRISIRKIIMKEEYEERKVIIPGKTLNEISKILSGEVDSFVNIFFTDKHALFEFDDTLVVTRLIDGEYYRIDQMLSSDYETKVTINKKELLSCIERASLLIRENDKKPIIIRVSDNNFELNINTSLGSMKEDVDIVMEGKDIVIGFNPKFLMDALRVIDDETVDIYLINPKAPCFIRNKEQSYIYLILPVNINVGA
SIO_010081: SD1D_RS00010
subclass of: SO_0000673
so part of: SD1D_RS00010
location: 1610..2719
location: region:1610-2719:1
so has part: feature:1610-2719:1:exon

WP_058257035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1610-2719:1:exon

SD1D_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00015
old locus tag: SD1D_0003
so part of: sequence
location: 2835..3044
location: region:2835-3044:1
so has part: feature:2835-3044:1:exon
subclass of: SO_0000010

position:2835:1
position: 2835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3044:1
position: 3044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2835-3044:1:exon

SD1D_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00015
old locus tag: SD1D_0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002585018.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-binding S4 domain-containing protein
translation: MIEIKLREDYIKLGQALKAAGLADSGSLAKSEILDGMVKVNGQVEIQRGKKLHDGDIVEYRGQKIKIIK
SIO_010081: SD1D_RS00015
subclass of: SO_0000673
so part of: SD1D_RS00015
location: 2835..3044
location: region:2835-3044:1
so has part: feature:2835-3044:1:exon

WP_058257036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2835-3044:1:exon

SD1D_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: recF
locus tag: SD1D_RS00020
old locus tag: SD1D_0004
so part of: sequence
location: 3106..4191
location: region:3106-4191:1
so has part: feature:3106-4191:1:exon
subclass of: SO_0000010

position:3106:1
position: 3106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4191:1
position: 4191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3106-4191:1:exon

SD1D_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: recF
locus tag: SD1D_RS00020
old locus tag: SD1D_0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738288.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication/repair protein RecF
translation: MIVKSLELKEFRNYEHLNLDFDSGINILYGKNAQGKTNILEAIYLGGTTKSHRGSKDREIIRFNKDEAHIRINIEKNQVTHRIDIHLKKNKAKGVAIDGIPIKRQGELFGMLNLVFFSPEDLNIIKNGPGERRRFLDLELCQLDKIYMYHLTNYNKALAQRNHLLKQISFNRDLLGTLYIWDAKLIEHGSVIINTRNSFIRKINELIYPIHKKLTGGKEELTLQYEPNVRLDEYPEKLKQSLERDLYLKMTNVGPHRDDMAFLFGKMDIKKFGSQGQQRTSALSLKLAELQLVEEVIKDKPVLLLDDVLSELDRSRQNYLLNSIGDIQTIITCTGLEEFINNRINYNKIFHVSNGTVSCEN
SIO_010081: SD1D_RS00020
subclass of: SO_0000673
so part of: SD1D_RS00020
location: 3106..4191
location: region:3106-4191:1
so has part: feature:3106-4191:1:exon

WP_058257037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3106-4191:1:exon

SD1D_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: gyrB
locus tag: SD1D_RS00025
old locus tag: SD1D_0005
so part of: sequence
location: 4299..6206
location: region:4299-6206:1
so has part: feature:4299-6206:1:exon
subclass of: SO_0000010

position:4299:1
position: 4299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6206:1
position: 6206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4299-6206:1:exon

SD1D_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: gyrB
locus tag: SD1D_RS00025
old locus tag: SD1D_0005
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009263554.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MSNNYGADQIQILEGLEAVRKRPGMYIGSTASKGLHHLVYEIVDNAVDEALAGYCDTIEVNINKDNSITVIDNGRGIPVGINHKAGIPAVEVVFTVLHAGGKFGGGGYKVSGGLHGVGASVVNALSEWLEVEICVDGKKYHQKYERGKPLMKLQELGETDLRGTKVSFLPDKEIFEETIFDYDILKQRLREMAFLTKGIKIILRDFRQEETVEKVFHYEGGIKEYVQYLNRHKDPLYHDIIYCEGKKDDVYVEVAMQHNQTYVEGCYSFVNNITTPEGGTHLVGFKNALTKTFNEYARNNKILKDNEANLSGEDIREGLVAIISIKLPDPQFEGQTKQKLGNSEARGAVDNIVSEQLTYYLEQNPNVAKMICEKAVLAQRAREAARKARELTRRKTALEGSGLPGKLADCSEKDPTKCEIYIVEGDSAGGSAKTARSRATQAILPLRGKILNVEKARLDKILSNNEIRAMITAFGTGISEDFDISKLRYHKIIIMTDADVDGAHIATLLLTFFYRFMPELIKQGYVYMAQPPLYKIEKGKNIKYAYSDVELDKILSEIGRDNVKIQRYKGLGEMNAEQLWDTTMDPEKRLLLRVTMDEEESSEIDLTFTTLMGDKVEPRREFIEANAKYVRNLDI
SIO_010081: SD1D_RS00025
subclass of: SO_0000673
so part of: SD1D_RS00025
location: 4299..6206
location: region:4299-6206:1
so has part: feature:4299-6206:1:exon

WP_058257038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4299-6206:1:exon

SD1D_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: gyrA
locus tag: SD1D_RS00030
old locus tag: SD1D_0006
so part of: sequence
location: 6307..8826
location: region:6307-8826:1
so has part: feature:6307-8826:1:exon
subclass of: SO_0000010

position:6307:1
position: 6307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8826:1
position: 8826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6307-8826:1:exon

SD1D_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: gyrA
locus tag: SD1D_RS00030
old locus tag: SD1D_0006
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006778069.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit A
translation: MDEYIFDKVQDVDLKKTMETSYIDYAMSVIASRALPDVRDGLKPVQRRILYAMIELNNGPDKPHRKCARIVGDTMGKYHPHGDSSIYEALVKLAQDFSTRYPLIDGHGNFGSVDGDGAAAMRYTEARLSKISMEMLSDINKDTVDFNPNFDESEREPVVLPSRYPNLLVNGTSGIAVGMATNIPPHNLVEVINGVLKIIDNQIDEDRDTEIDEILDIIKGPDFPTGAEIIGRRGIEEAYRTGRGKIRVRAVTEIETMQNGKPRIIVTELPYMVNKAKLIEKIADLVKEKKIDGITELRDESDRNGMRIVIELRRDVNANVLLNQLYKHTQLQDTFGVIMLALVNNEPRVLNILQMLEYYLKHQKEVVTRRTKYDLNKAEERAHILQGLLIALDHIDEVISIIRGSQNGNIAKERLIERFGLSEAQAQAIIDMRLRALTGLERERLEAEFAELLAKIEEYKAILGDEKKLLGVIKEEITIIRDKYGDERRTKISYDEFDISMEDLIPNETTLIAMTKLGYIKRMTVDNFKSQHRGGKGIKGMQTIEDDFIEDLLMTMNHDYIMFFTNQGRVYRLKAYEIPEASRTARGMAIINLLQLMPDEQITAIIPIKEYKEDRYLFMATKYGMVKKTPIKDYENIRKSGLIAINLREGDELIEVKITNGKKDVFLVTKKGMCIRFDEDDVRPTGRSSMGVIGMSLDEDDQIIGMQLDTQGEYLLFVSAKGLGKRTAIDEFKVQFRGGKGVKCYKLTEKTGEVVGVKAVNEENEIMLITTEGIIIRILVSDISILGRITSGVKLINLDDENVFVASLAKVREESSSTSDEDIIKNLEKELKEENQSDS
SIO_010081: SD1D_RS00030
subclass of: SO_0000673
so part of: SD1D_RS00030
location: 6307..8826
location: region:6307-8826:1
so has part: feature:6307-8826:1:exon

WP_058257039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6307-8826:1:exon

SD1D_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00035
old locus tag: SD1D_0007
so part of: sequence
location: 8868..9710
location: region:8868-9710:1
so has part: feature:8868-9710:1:exon
subclass of: SO_0000010

position:8868:1
position: 8868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9710:1
position: 9710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8868-9710:1:exon

SD1D_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00035
old locus tag: SD1D_0007
EC number: 4.2.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008392973.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarate hydratase
translation: MRIISTSEIVKNIKEMCIEANYKLASDVDLSIREAYKSETSPIGKLVLGQLCDNLDIAKKELIPICQDTGMTIVFVKIGQKLHIEGGSLEDAINEGIRLGYQEGYLRKSVVSDPIIRKNSMDNSPGIIYYEIVPGDKLDITVAPKGFGSENMSRIYMLKPSDGVEGIKKAVLETVKLAGPNACPPIVVGIGIGGSFEKCALLAKKALMRSLDKYSDKAHIRKLEEELLEEINKTNIGPAGFGGKNTALGVKIETYPTHIAGLPVAINISCHVNRHVNRIL
SIO_010081: SD1D_RS00035
subclass of: SO_0000673
so part of: SD1D_RS00035
location: 8868..9710
location: region:8868-9710:1
so has part: feature:8868-9710:1:exon

WP_058257040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8868-9710:1:exon

SD1D_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00040
old locus tag: SD1D_0008
so part of: sequence
location: 9756..10289
location: region:9756-10289:1
so has part: feature:9756-10289:1:exon
subclass of: SO_0000010

position:9756:1
position: 9756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10289:1
position: 10289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9756-10289:1:exon

SD1D_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00040
old locus tag: SD1D_0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005361545.1
GO function: GO:0016836 - hydro-lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S-containing hydro-lyase
translation: MKKYISTPLSKDEASKLKAGDYVYITGIMYTARDAAHLRMYEALIKGEELPFSLEDNFIYYMGPTPAKKGQVIGSAGPTTSSRMDKYTPLLLDKGLRGMIGKGHRDNKVIDSIVKNQAVYFAAIGGAGALLSKSIKKAEVIAYDDLGTEAIRKIYVEEFPAIVVIDSKGNNLYKIKD
SIO_010081: SD1D_RS00040
subclass of: SO_0000673
so part of: SD1D_RS00040
location: 9756..10289
location: region:9756-10289:1
so has part: feature:9756-10289:1:exon

WP_058257041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9756-10289:1:exon

SD1D_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00045
old locus tag: SD1D_0009
so part of: sequence
location: 10388..10475
location: region:10388-10475:1
so has part: feature:10388-10475:1:exon
subclass of: SO_0000663

position:10388:1
position: 10388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10475:1
position: 10475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10388-10475:1:exon

SD1D_RS00045
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00045
old locus tag: SD1D_0009
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:10422..10424,aa:Ser,seq:gct)
SIO_010081: SD1D_RS00045
subclass of: SO_0000673
so part of: SD1D_RS00045
location: 10388..10475
location: region:10388-10475:1
so has part: feature:10388-10475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10388-10475:1:exon

SD1D_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00050
old locus tag: SD1D_0010
so part of: sequence
location: 11281..12813
location: region:11281-12813:1
so has part: feature:11281-12813:1:exon
subclass of: SO_0000573

position:11281:1
position: 11281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12813:1
position: 12813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11281-12813:1:exon

SD1D_RS00050
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1679721
locus tag: SD1D_RS00050
old locus tag: SD1D_0010
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SD1D_RS00050
subclass of: SO_0000673
so part of: SD1D_RS00050
location: 11281..12813
location: region:11281-12813:1
so has part: feature:11281-12813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11281-12813:1:exon

SD1D_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rrf
locus tag: SD1D_RS00055
old locus tag: SD1D_0012
so part of: sequence
location: 12861..12978
location: region:12861-12978:1
so has part: feature:12861-12978:1:exon
subclass of: SO_0000573

position:12861:1
position: 12861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12978:1
position: 12978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12861-12978:1:exon

SD1D_RS00055
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1679721
gene: rrf
locus tag: SD1D_RS00055
old locus tag: SD1D_0012
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SD1D_RS00055
subclass of: SO_0000673
so part of: SD1D_RS00055
location: 12861..12978
location: region:12861-12978:1
so has part: feature:12861-12978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12861-12978:1:exon

SD1D_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00060
old locus tag: SD1D_0013
so part of: sequence
location: 13015..13088
location: region:13015-13088:1
so has part: feature:13015-13088:1:exon
subclass of: SO_0000663

position:13015:1
position: 13015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13088:1
position: 13088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13015-13088:1:exon

SD1D_RS00060
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00060
old locus tag: SD1D_0013
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:13049..13051,aa:Ile,seq:gat)
SIO_010081: SD1D_RS00060
subclass of: SO_0000673
so part of: SD1D_RS00060
location: 13015..13088
location: region:13015-13088:1
so has part: feature:13015-13088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13015-13088:1:exon

SD1D_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00065
old locus tag: SD1D_0014
so part of: sequence
location: 13567..16466
location: region:13567-16466:1
so has part: feature:13567-16466:1:exon
subclass of: SO_0000573

position:13567:1
position: 13567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16466:1
position: 16466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13567-16466:1:exon

SD1D_RS00065
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1679721
locus tag: SD1D_RS00065
old locus tag: SD1D_0014
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SD1D_RS00065
subclass of: SO_0000673
so part of: SD1D_RS00065
location: 13567..16466
location: region:13567-16466:1
so has part: feature:13567-16466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13567-16466:1:exon

SD1D_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00070
old locus tag: SD1D_0015
so part of: sequence
location: 16526..16599
location: region:16526-16599:1
so has part: feature:16526-16599:1:exon
subclass of: SO_0000663

position:16526:1
position: 16526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16599:1
position: 16599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16526-16599:1:exon

SD1D_RS00070
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00070
old locus tag: SD1D_0015
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16560..16562,aa:Asp,seq:gtc)
SIO_010081: SD1D_RS00070
subclass of: SO_0000673
so part of: SD1D_RS00070
location: 16526..16599
location: region:16526-16599:1
so has part: feature:16526-16599:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16526-16599:1:exon

SD1D_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00075
old locus tag: SD1D_0016
so part of: sequence
location: 16717..16789
location: region:16717-16789:1
so has part: feature:16717-16789:1:exon
subclass of: SO_0000663

position:16717:1
position: 16717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16789:1
position: 16789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16717-16789:1:exon

SD1D_RS00075
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00075
old locus tag: SD1D_0016
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16750..16752,aa:Val,seq:tac)
SIO_010081: SD1D_RS00075
subclass of: SO_0000673
so part of: SD1D_RS00075
location: 16717..16789
location: region:16717-16789:1
so has part: feature:16717-16789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16717-16789:1:exon

SD1D_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00080
old locus tag: SD1D_0017
so part of: sequence
location: 16801..16873
location: region:16801-16873:1
so has part: feature:16801-16873:1:exon
subclass of: SO_0000663

position:16801:1
position: 16801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16873:1
position: 16873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16801-16873:1:exon

SD1D_RS00080
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00080
old locus tag: SD1D_0017
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16834..16836,aa:Thr,seq:tgt)
SIO_010081: SD1D_RS00080
subclass of: SO_0000673
so part of: SD1D_RS00080
location: 16801..16873
location: region:16801-16873:1
so has part: feature:16801-16873:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16801-16873:1:exon

SD1D_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00085
old locus tag: SD1D_0018
so part of: sequence
location: 16911..16992
location: region:16911-16992:1
so has part: feature:16911-16992:1:exon
subclass of: SO_0000663

position:16911:1
position: 16911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16992:1
position: 16992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16911-16992:1:exon

SD1D_RS00085
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00085
old locus tag: SD1D_0018
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:16945..16947,aa:Tyr,seq:gta)
SIO_010081: SD1D_RS00085
subclass of: SO_0000673
so part of: SD1D_RS00085
location: 16911..16992
location: region:16911-16992:1
so has part: feature:16911-16992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16911-16992:1:exon

SD1D_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00090
old locus tag: SD1D_0019
so part of: sequence
location: 17051..17124
location: region:17051-17124:1
so has part: feature:17051-17124:1:exon
subclass of: SO_0000663

position:17051:1
position: 17051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17124:1
position: 17124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17051-17124:1:exon

SD1D_RS00090
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00090
old locus tag: SD1D_0019
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:17085..17087,aa:Met,seq:cat)
SIO_010081: SD1D_RS00090
subclass of: SO_0000673
so part of: SD1D_RS00090
location: 17051..17124
location: region:17051-17124:1
so has part: feature:17051-17124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17051-17124:1:exon

SD1D_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00095
old locus tag: SD1D_0020
so part of: sequence
location: 17191..17263
location: region:17191-17263:1
so has part: feature:17191-17263:1:exon
subclass of: SO_0000663

position:17191:1
position: 17191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17263:1
position: 17263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17191-17263:1:exon

SD1D_RS00095
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00095
old locus tag: SD1D_0020
product: tRNA-Phe
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:17224..17226,aa:Phe,seq:gaa)
SIO_010081: SD1D_RS00095
subclass of: SO_0000673
so part of: SD1D_RS00095
location: 17191..17263
location: region:17191-17263:1
so has part: feature:17191-17263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17191-17263:1:exon

SD1D_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00100
old locus tag: SD1D_0021
so part of: sequence
location: 17292..17364
location: region:17292-17364:1
so has part: feature:17292-17364:1:exon
subclass of: SO_0000663

position:17292:1
position: 17292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17364:1
position: 17364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17292-17364:1:exon

SD1D_RS00100
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00100
old locus tag: SD1D_0021
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:17325..17327,aa:Lys,seq:ttt)
SIO_010081: SD1D_RS00100
subclass of: SO_0000673
so part of: SD1D_RS00100
location: 17292..17364
location: region:17292-17364:1
so has part: feature:17292-17364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17292-17364:1:exon

SD1D_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00105
old locus tag: SD1D_0022
so part of: sequence
location: 17561..18277
location: region:17561-18277:1
so has part: feature:17561-18277:1:exon
subclass of: SO_0000010

position:17561:1
position: 17561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18277:1
position: 18277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17561-18277:1:exon

SD1D_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00105
old locus tag: SD1D_0022
EC number: 2.3.1.286
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009251961.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]; GO:0034979 - NAD-dependent protein deacetylase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent protein deacylase
translation: MKEKVDLLKQYINESDNIVFFGGAGVSTESGIPDFRSVDGLYHMKYKYPPETILSHSFFIRHTEQFYEFYKEKMIYKDVKPNITHLKLADLEKQGKLKAVVTQNIDGLHQEAGSKNVLELHGSVLRNFCMNCNKFYDLNKIIKSKNIPYCQCGGIIKPDVVLYEESLDDATITKAIQFISKADILIIGGTSLSVYPAAGLIRYYKGRKMVLINKSVTAYDNDADLFIQAGLGEVFKEL
SIO_010081: SD1D_RS00105
subclass of: SO_0000673
so part of: SD1D_RS00105
location: 17561..18277
location: region:17561-18277:1
so has part: feature:17561-18277:1:exon

WP_058257042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17561-18277:1:exon

SD1D_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00110
old locus tag: SD1D_0023
so part of: sequence
location: 18346..18909
location: region:18346-18909:1
so has part: feature:18346-18909:1:exon
subclass of: SO_0000010

position:18346:1
position: 18346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18909:1
position: 18909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18346-18909:1:exon

SD1D_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00110
old locus tag: SD1D_0023
inference: COORDINATES: protein motif:HMM:NF024231.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ECF transporter S component
translation: MQTDRRSNSYRLTIGGILLALGIIVPRMFHVFGTPGIGKVFLPMHFSIFIAGIFLGPFYGTIIGFITPLINSLFGMPIFPQNIIMAFELASYGLFAGLFMYLLKSYNNKRISRTIRIYISLILSMILGRMVNAIVLLLMARLFNMNVPAPLSVLASSLRGMPGILIQLLLVPGIVIAIYSSQEKYIQ
SIO_010081: SD1D_RS00110
subclass of: SO_0000673
so part of: SD1D_RS00110
location: 18346..18909
location: region:18346-18909:1
so has part: feature:18346-18909:1:exon

WP_058257043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18346-18909:1:exon

SD1D_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: tkt
locus tag: SD1D_RS00115
old locus tag: SD1D_0024
so part of: sequence
location: 19131..21113
location: region:19131-21113:1
so has part: feature:19131-21113:1:exon
subclass of: SO_0000010

position:19131:1
position: 19131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21113:1
position: 21113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19131-21113:1:exon

SD1D_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: tkt
locus tag: SD1D_RS00115
old locus tag: SD1D_0024
EC number: 2.2.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198048.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004802 - transketolase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transketolase
translation: MSKIDTMSVNAIRILSADGVQKANSGHPGLPLGAAAMAYELWAKHMKHNPANPKWPNRDRFVLSGGHGSMLLYSLLHLFGYGLTKEDLEQFRQDGSLTPGHPEYGHTVGVEATTGPLGAGMAMAVGMAMAEAHLAAKFNKEGYPVVDHYTYVLGGDGCMMEGITSEAMSLAGTLGLGKLIVLYDSNKISIEGDTDIAFTEDVKKRFEAYGFQTLVVEDGNNLEEIGAAIEAAKADLTRPSMITIKTKIGYGSPKEGMASAHGEPLGADNIKALRENLGWPSDTPFEVPEEVYENYKSIAKKNAQIEEEWNKLFESYCKEYPEMKKLWDQYHDENAAKHLIDNEEFWAYDDKADATRNLSGQVINRIKDHLPNFIGGSADLAPSTKTLMKDEESFSKDNYGGRNLHFGVRELAMAGIGNGMALHGGLRPYVSTFFVFSDYVKPMARLSALMEMPLTYVLTHDSIGVGEDGPTHEPIEQLAMLRAMPNFTVYRPADATETIAAWYYAITSTKTPTALVLSRQNLPQLAGSSKEALKGAYIISDSKKEVPDAIIIASGSEVQLGLGAQEELLKEGIDVRVVSMPSMDVFEQQSEEYKESILPKNVRARVAVEALSYFGWGRYVGLDGTTIAMNSFGASAPANVLFEKFGFTVDNVVKAVKSVL
SIO_010081: SD1D_RS00115
subclass of: SO_0000673
so part of: SD1D_RS00115
location: 19131..21113
location: region:19131-21113:1
so has part: feature:19131-21113:1:exon

WP_058257044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19131-21113:1:exon

SD1D_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00120
old locus tag: SD1D_0025
so part of: sequence
location: 21322..22005
location: region:21322-22005:1
so has part: feature:21322-22005:1:exon
subclass of: SO_0000010

position:21322:1
position: 21322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22005:1
position: 22005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21322-22005:1:exon

SD1D_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00120
old locus tag: SD1D_0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003443247.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MQVAKILIIEDELKIARFLELELKHEGYEVLICGDGRNGLNKALNEDVDLIILDIMLPGLNGIEVCRRIRLESQVPIIMLTAKDDVSDKVAGLDTGADDYMTKPFAIEELLARIRVALNRKKNQKEPKIETLQVGDLKLNLASRSAYYKDDELVLTKKEYELLEYMLRNKNFVLSREQLLNHVWDYEYFGDTNVVDVYIRYLRQKIDEKYGIHLISTVRGVGYIIKD
SIO_010081: SD1D_RS00120
subclass of: SO_0000673
so part of: SD1D_RS00120
location: 21322..22005
location: region:21322-22005:1
so has part: feature:21322-22005:1:exon

WP_273231631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21322-22005:1:exon

SD1D_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00125
old locus tag: SD1D_0026
so part of: sequence
location: 22139..23461
location: region:22139-23461:1
so has part: feature:22139-23461:1:exon
subclass of: SO_0000010

position:22139:1
position: 22139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23461:1
position: 23461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22139-23461:1:exon

SD1D_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00125
old locus tag: SD1D_0026
inference: COORDINATES: protein motif:HMM:NF014567.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MFRISMGYLKLLITHGLLLMFGIFLIFMYAEKENFSDMANDIITSFKEEDESAYINPYYMQGLSMKLLDINTNEEVYNDIAYLPASDKAFFHGIHFDTKSDKNILVINEDKEFTTEKSSYIATFQYDLTGSYRSFLSMLWKLIVLYIIIVVLIIKKGRKSDEKLFEPIRIMSATANRLTVHNLHSERLNVEGTQNELKDLANVINEMLDRIETSYESQKQFVSDASHELRTPIAVIQGYANLLDRWGSENKEVLAESIEAIQNESRSMQDLVEKLLFLSRHDKKTLKLIKKRFNMRPMVEDMIKETKLTTPNRIINSPILEDVVVYGDKQALKQAIRIFIDNAIKYSNDGDEITILCENQNGDCVITVKDTGIGMTRKDVEHIFDRFYRSDYVRNHNISGHGLGLSLAKLIILAHIGKIKVRTQFTKGTSFIITIPNRKF
SIO_010081: SD1D_RS00125
subclass of: SO_0000673
so part of: SD1D_RS00125
location: 22139..23461
location: region:22139-23461:1
so has part: feature:22139-23461:1:exon

WP_162287262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22139-23461:1:exon

SD1D_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00130
old locus tag: SD1D_0027
so part of: sequence
location: complement(23519..25294)
location: region:23519-25294:-1
so has part: feature:23519-25294:-1:exon
subclass of: SO_0000010

position:23519:-1
position: 23519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25294:-1
position: 25294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23519-25294:-1:exon

SD1D_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00130
old locus tag: SD1D_0027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016289396.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSINAIKEDEHISSVSKKDTLVRLFKYLLAYRSTIFSVILIMLTTVAISIINPLLIERAIDVHIANKDIKRLLMLIGFALGLNIIFILLVKLRMYLMAKMSNDVLLRIRQELYTHIQKLSFNFFDSRPTGKILARIIGDVNSLKDVLSDSVTTLIPDFVTIVAVVIIMLVKNWRLALASLISLPLMLCGLWFIETRSHVRWRIHRKKSSNLNAFIHESLSGIRIIQSFTAENETEEDFDHLLKEHRGSFISAILINDAFFSVVDISWGLGTIAMYFVAVKVLGIGAGNVGTLISFGMYIGMFWRPIMNLSNFYNKIITNISGAERIFDILDTKPEIEDRANVIEMPEIKGEVTFEHVSFAYDEDTPVLNDVSFVVKPGETIALVGPTGAGKTTIVNLISRFYDVQQGNVYIDGYNVKDVSIESLRKQMGIMTQDNFLFSGTVKDNIRYGRLDAKDEEIIEAAKAVNAHDFIMKLKDGYDTELKERGSGLSIGQRQLIAFARTMVSMPKILILDEATSSIDTHTELLVQQGIEALLKGRTSFVIAHRLSTISKADRIFVIDKGKILEEGTSSELLAKKGLYYDLYMAQFKNI
SIO_010081: SD1D_RS00130
subclass of: SO_0000673
so part of: SD1D_RS00130
location: complement(23519..25294)
location: region:23519-25294:-1
so has part: feature:23519-25294:-1:exon

WP_058257047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23519-25294:-1:exon

SD1D_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00135
old locus tag: SD1D_0028
so part of: sequence
location: complement(25285..27033)
location: region:25285-27033:-1
so has part: feature:25285-27033:-1:exon
subclass of: SO_0000010

position:25285:-1
position: 25285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27033:-1
position: 27033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25285-27033:-1:exon

SD1D_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00135
old locus tag: SD1D_0028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016290720.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNKLSYYLKKYWYAYAFALLCTIIAVVLDMVSPQVTKNIIDKVIIEGKTDLLFSLLSMILFIGLGRAVFTYVKELIFDTVSSKIGSQLRKRLFTHIQGLSISFFDENNTGELMSRVKDDVDRIWAATGYVSMLIFEVTIHTGIALFFMYRESASLAIIPTIVLPIVGGLAILMENKLGKIYENISEQNAKLNTVAQENLAGVRTVKAFAREKFEINKFLSHNKQYYDLNMKQSKVFIKLYPYFQLITKLLPMFVILFGGRQVIRGEISLGTLGAFTEYSMNIVWPMEMLGWLSNDLAAAFASYKRIRKIFAEEAKITEPENPVILDEVKGSVEFNQVSFNLNGNDILTDISFKLEAGKTIGIMGTTGAGKSSIINLLQRFYDASQGEILLDGVNIKDLSLKQLRGSISLVMQDVFLFSDTINENVKLGKRPWVKQEEVIEAAHYSQASEFIERMDDGYDTIIGERGVGLSGGQKQRISIARALAKKTPILVLDDSTSALDMETEHLIQKSLTDIKATKIIIAHRISAVRNADEIIILENGKIKERGTHETLLKEKGYYYQTYQAQYGDYISDSGNREVTTCL
SIO_010081: SD1D_RS00135
subclass of: SO_0000673
so part of: SD1D_RS00135
location: complement(25285..27033)
location: region:25285-27033:-1
so has part: feature:25285-27033:-1:exon

WP_058257048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25285-27033:-1:exon

SD1D_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00140
old locus tag: SD1D_0029
so part of: sequence
location: 27539..28330
location: region:27539-28330:1
so has part: feature:27539-28330:1:exon
subclass of: SO_0000010

position:27539:1
position: 27539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28330:1
position: 28330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27539-28330:1:exon

SD1D_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00140
old locus tag: SD1D_0029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015528265.1
GO process: GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP pyrophosphokinase family protein
translation: MDLPILYNEAEEWSQAIMLYDAALKEINTKLEILNNEFKLAHQYNPIEHITSRLKTPQSIANKLKRYGRDLTVENIIKYVNDVAGIRVICSFTSDIYRIADLISKISDVKVLKVKDYIANPKPNGYTSYHMIVTIPVFLSNMTVDTKVEIQIRTIAMDFWASLEHKIYYKFEGNAPDHIQKELRECSELVAYLDRKMLSINEEIQNYSSNQVKNYGIEDKYNSEIVESLGTIVDEGNSKKDKRKKEKETKKTGRNRMFFGFGA
SIO_010081: SD1D_RS00140
subclass of: SO_0000673
so part of: SD1D_RS00140
location: 27539..28330
location: region:27539-28330:1
so has part: feature:27539-28330:1:exon

WP_058257049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27539-28330:1:exon

SD1D_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00145
old locus tag: SD1D_0030
so part of: sequence
location: complement(28382..29320)
location: region:28382-29320:-1
so has part: feature:28382-29320:-1:exon
subclass of: SO_0000010

position:28382:-1
position: 28382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29320:-1
position: 29320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28382-29320:-1:exon

SD1D_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00145
old locus tag: SD1D_0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015545060.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S1 RNA-binding domain-containing protein
translation: MSTENITNTDDSNLSMDDFKEEIDRSFKKISEGDIIKGTVIGVSDTEVSVDLGYYAEGIIGLEELSNDPNFSIKDDIIVGDEISAMVIGNDDGHGNILLSKKRADDIIAWDKIMEDYEAKTKVKVKIGQAVNGGLITYLYGIRAFIPASQLSLSYVKDLESWVGKELDAIIITASKENRKLVLSAKEVEIDKANKEKALKISNLTRGLVTTGLVEKIVPYGAFVNIGDGLSGLVHISQICEKRIKSPNEVIKEGDNVTVKIIDIKDGKISLSMKEVKAKEEVIEDVEDTQFVYQADEEATTSLASLLKNIKL
SIO_010081: SD1D_RS00145
subclass of: SO_0000673
so part of: SD1D_RS00145
location: complement(28382..29320)
location: region:28382-29320:-1
so has part: feature:28382-29320:-1:exon

WP_058257050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28382-29320:-1:exon

SD1D_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00150
old locus tag: SD1D_0031
so part of: sequence
location: complement(29378..30115)
location: region:29378-30115:-1
so has part: feature:29378-30115:-1:exon
subclass of: SO_0000010

position:29378:-1
position: 29378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30115:-1
position: 30115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29378-30115:-1:exon

SD1D_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00150
old locus tag: SD1D_0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198057.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEQLFHKVCDDIIGREKDFMGIGTLSEKTVHSVLKNYYEANELNHEVKIEGFVADICNGKEIIEIQTRSFDRLRKKLSIFLQHFPVTIVYPVPYIKWIRWINPETGKISSPRKSPKKGSPYMIFPELYKIKNFLKLPNLRFKIVLLNMEEYRILDGWSKDKKKGSTKCDRIPLEMVDEIYISGLEDYKLLIPKSLGEEFSSKDFKAASGLSNNASSIAMNILNHVGSIQKVGKKGRLYIYSRSI
SIO_010081: SD1D_RS00150
subclass of: SO_0000673
so part of: SD1D_RS00150
location: complement(29378..30115)
location: region:29378-30115:-1
so has part: feature:29378-30115:-1:exon

WP_058257051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29378-30115:-1:exon

SD1D_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00155
old locus tag: SD1D_0032
so part of: sequence
location: complement(30211..31239)
location: region:30211-31239:-1
so has part: feature:30211-31239:-1:exon
subclass of: SO_0000010

position:30211:-1
position: 30211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31239:-1
position: 31239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30211-31239:-1:exon

SD1D_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00155
old locus tag: SD1D_0032
inference: COORDINATES: protein motif:HMM:NF012415.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CAP domain-containing protein
translation: MGKKISLRYVLLLSTLIFSISSKGCLKKDIDPNLENDISSMSHINQAYSEADILNKPNKSTKSNSSSSKKNPTVNSEITLNVRGISISLGEEEKSILHKLGKPNRIVSTEYDFNYYVYNNDYSKLLFVAIRDSEVVGFYTDSIDFNFMGISPQSDLNLVNKILKKDFTMDFILTHNTHSYSLEIFMDEVGTNYVTGISLLTADIKENKSMDEITNHIELLVFDLTNSIRARNGLSTLSWSSTAANAARKHSTDMAINSYFSHYDKYNKGPSDRLNEEGITFQYLGENIIAGYGTAIISTHAWFNSPDHRENILNKNFRNLGVGFTYIKDSDYKTYITQLFYR
SIO_010081: SD1D_RS00155
subclass of: SO_0000673
so part of: SD1D_RS00155
location: complement(30211..31239)
location: region:30211-31239:-1
so has part: feature:30211-31239:-1:exon

WP_058257052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30211-31239:-1:exon

SD1D_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: galE
locus tag: SD1D_RS00160
old locus tag: SD1D_0033
so part of: sequence
location: 31429..32442
location: region:31429-32442:1
so has part: feature:31429-32442:1:exon
subclass of: SO_0000010

position:31429:1
position: 31429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32442:1
position: 32442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31429-32442:1:exon

SD1D_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: galE
locus tag: SD1D_RS00160
old locus tag: SD1D_0033
EC number: 5.1.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003510519.1
GO function: GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO process: GO:0006012 - galactose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-glucose 4-epimerase GalE
translation: MKVLVTGGAGYIASHTNIELLNCGYEVVAVDNLSNSNMESIRRVEKLTNRKIKFYENDILDKSALQKIFEEEKIDAVIHFAGLKAVGESCKIPLKYFKNNVSGTINLLEVMEEYGVKTLVFSSSATVYGDPQTVPITEDFPLSVTNPYGRTKLMIEEILGDIYAADNSWNIAILRYFNPIGAHESGEIGEDPNGIPNNLVPYIAKVAMGVLDKINVFGDDYDTPDGTGVRDYIHVVDLAIGHIKAIEKLKDKPGLVTYNLGTGRGYSVLEVIHNYEKACKKKLPYVITDRRPGDIAISYADPAKANKELGWKAVRDIEQMCRDSYNWQSKNPNGYHS
SIO_010081: SD1D_RS00160
subclass of: SO_0000673
so part of: SD1D_RS00160
location: 31429..32442
location: region:31429-32442:1
so has part: feature:31429-32442:1:exon

WP_058257053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31429-32442:1:exon

SD1D_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00165
old locus tag: SD1D_0034
so part of: sequence
location: complement(32681..33730)
location: region:32681-33730:-1
so has part: feature:32681-33730:-1:exon
subclass of: SO_0000010

position:32681:-1
position: 32681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33730:-1
position: 33730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32681-33730:-1:exon

SD1D_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00165
old locus tag: SD1D_0034
inference: COORDINATES: protein motif:HMM:NF027464.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4846 domain-containing protein
translation: MKSQKKPLKICIFISKFFLLMFILFSLLMGCNKKDNNQAIVDENTKKDYPDTNSTDDDKNLDAESINIENPINFINPEGKTLDIRIMTPKGYSRIPSSSDELTGFIRNLPLKDDGSKVLAYNKKPIKHQKNHVAVFDIDIGKKDLQQCADSAMRIYAEYYWSLEEYDKIAFHLTNGFYMEYNKWREGYRIKVDGNNVTWVHSTSYDDSYENFLKYMERVFTYAGTLSLTAESKPIQLSELLPGDLLLEGGSPGHCVMVVDIATDENGNRCFLLAQGYMPAQDFHILTNPLHPEDPWYYEEEMTYPIVTPSWTFHEGTLMRWADFKLEQLYQDTSTTDEDRITLLAVGVN
SIO_010081: SD1D_RS00165
subclass of: SO_0000673
so part of: SD1D_RS00165
location: complement(32681..33730)
location: region:32681-33730:-1
so has part: feature:32681-33730:-1:exon

WP_058257054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32681-33730:-1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 1679721
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.4
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: 33919..34162
location: region:33919-34162:1
so has part: feature:33919-34162:1:region

position:33919:1
position: 33919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34162:1
position: 34162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33919-34162:1:region

SD1D_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: metG
locus tag: SD1D_RS00170
old locus tag: SD1D_0035
so part of: sequence
location: 34239..36212
location: region:34239-36212:1
so has part: feature:34239-36212:1:exon
subclass of: SO_0000010

position:34239:1
position: 34239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36212:1
position: 36212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34239-36212:1:exon

SD1D_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: metG
locus tag: SD1D_RS00170
old locus tag: SD1D_0035
EC number: 6.1.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005425650.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine--tRNA ligase
translation: MSKKPYYITTAIAYTSGKPHIGNTYEIVLADSIARFKRWEGYDVFFQTGTDEHGQKIELKANEAGISPKEYVDKIAGDIKNIWDLMNTSYDKFIRTTDTDHERQVQKIFKKLYEQGDIYKGFYEGMYCTPCESFFTQSQLKEGKCPDCGREVQAAKEEAYFLKLSKYADRLIEHIKENSEFIQPESRKHEMMNNFLIPGLQDLCVSRTSFKWGIPVDFDDKHVIYVWLDALSNYITGIGYDVDGNSSQQFKKYWPANLHLIGKDILRFHTIYWPITLMALGLPLPKQIFGHPWLLQGSSGDKMSKSKGNVLYADDLVKIFGVDAVRYFVLHEMPFDNDGTITWELLVERINSDLANTLGNLVNRTISMSNKYFEGIVSDGKVVEAVDEQLKGLALQTPSKVIAKMEKLRVADAISEIFNLFKRCNKYIDETMPWILAKDEEKKARLATVLYNLVESICIGASLLKPFMPETADKILSQLSAKARSIEEINDFGLYPSGTRVTEKPEILFARLDIKEVLKQVEESKEKEEQVEENQAGQGSKDIIDIEAKPEITYDDFAKLQFQIGEIIACEEVKKSKKLLCSQVKIGSQVKQIVSGIKGHYTAQEMVGKKVMVVTNLKPAKLAGLVSEGMLLCAEDLEGNLSLMIPERPMPSGAEIS
SIO_010081: SD1D_RS00170
subclass of: SO_0000673
so part of: SD1D_RS00170
location: 34239..36212
location: region:34239-36212:1
so has part: feature:34239-36212:1:exon

WP_058257055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34239-36212:1:exon

SD1D_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00175
old locus tag: SD1D_0036
so part of: sequence
location: complement(36278..38059)
location: region:36278-38059:-1
so has part: feature:36278-38059:-1:exon
subclass of: SO_0000010

position:36278:-1
position: 36278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38059:-1
position: 38059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36278-38059:-1:exon

SD1D_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00175
old locus tag: SD1D_0036
inference: COORDINATES: protein motif:HMM:NF017745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF885 domain-containing protein
translation: MFKKIFIQKRLKLYLILCLIFLFSFFTFGCNKSSDIESQQSKFDQFIHKVFVNEVQSDALSLHYTLSRPEEFGIEPSEVTLGEYSIIRLKEELMTSKEYLKELKEFDYDSLTLDQQLTYDILHNYLETELELGNYLYYFESLGPTTGLQAQLPILLAEYNFYDKDDIERYLDLLPCVYDYFEDISEFEKEKSEKGLFMSDAVADRIIQQCEAFIANPDENLLIEYFDEKIESFQNLTDEERKTYKNENKKRVLEYIIPSYELIIDVLQELKGSGKNNAGLYYYPEGKAYYKALAKIKSGSSRSLNDIIKMLETNINDDIMEITNLAILEPSLLNTVESFTAFPLTDPETILEDLKKNIVDDFPEPVDVNCEIKYVHESLSDYLSPAMYLVPAIDNYTDNNIYINGNDLETLSTIYPTVAHEGYPGHLYQNVYFRSLNPAPIRNLLNFVGYDEGWATYVEYLSYSYAGIDPKLASLLEINNRVLLMIHARADIGIHYEGWTKDKAVTYISQYTGDMDVAEAIYNRLLEEPAIYLPYAIGYLEIIELKNIAQEKLGDDFNLKEFHKFLLDIGPAQFGIIEDHIEVWLSNKEIASK
SIO_010081: SD1D_RS00175
subclass of: SO_0000673
so part of: SD1D_RS00175
location: complement(36278..38059)
location: region:36278-38059:-1
so has part: feature:36278-38059:-1:exon

WP_058257056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36278-38059:-1:exon

SD1D_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00180
old locus tag: SD1D_0037
so part of: sequence
location: 38280..41366
location: region:38280-41366:1
so has part: feature:38280-41366:1:exon
subclass of: SO_0000010

position:38280:1
position: 38280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41366:1
position: 41366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38280-41366:1:exon

SD1D_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00180
old locus tag: SD1D_0037
inference: COORDINATES: protein motif:HMM:NF040034.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6240 domain-containing protein
translation: MKNIVTNTDIDLIMEILRQARPIKAAVQKEESNNTLSSKEIEYNNSPRSYLKGPDTDGGLMLSRKNRKIYLQKKDEYFQEIKKHINDILNRLTEQDYKKLLDEGFQVEDLTVESLAGAIKMIKDFNNINKEKKEEASPKNKDKKISDDELNEKMKAYNIPVSDEAKDRIKEALNLSESIQNIEKKDILYLIGKNLPPTIENIYKARYSSKNNEANNKLSDADWDELIPKVSDFLNKVGIQLSNDTLDKARWLVENNLSLSKENINYITGLEKLARNYDKGMILERIFKGMGKGILPGDVPLLDENIEDKDVNRLLEDIHSINDEDIINSVKDRQEINIKNLVNSKEAEELDVEQEYEKMPADQKVKFITAKKQLEEIRLKMTAEAALRLEKKGFSIDTKPLEEVVEKLRQEEESYYKELLEQAEIKADEEKINLLRNTTESLKELKIIPAHVLGATLYDIEKHTISGLIGTGRSILIDLEKAKESYEALFTQPRTDYGDSIQKAFDNMESLMEEMGIEDTSYNKRAIRILGYNRMEITKEAIEEVKAYDLQVNYLIKNMNPALAVKIIKDGLNPMDLPIEELNYRLDKIREEESFSSIEKYSTYLYKLEKESKISEAERKAYIGIYRLLYQIEKSDGAALGAVIKSEREVTLNNLLTALRTMKKGKMDYNVDDNFGGLKELSFEKETISDQLGAVFSEQASQRNIHRSIIKQLLEEMNPGKLQRLHINNTDEEVQAQQNLWDTLGNMPIEKLLDQIKAMETNPGDDQAYFYEKLNQLRKIYENCDQAIHFLNNFKIPCTTGNLIMAEQILNNSMDVYKKLLHRNLKKKSQLTDKLIDKKTINEAYEQLEQEAKDIIEEKAKADDIDSFKLNELRNMGLQMQFIKTLGKREFYQLPLEMSGKLTNINLTIIRGKSDAGKVTVTLSSDKLGNIKAEARLKENTLSGYFACDHKDSISILKTKEDLLNSLLKEENLEIKQLNFYLQQAAKDIYGYQNTWESEGSSNPETERILYRVAKALIYMIKTAEEEL
SIO_010081: SD1D_RS00180
subclass of: SO_0000673
so part of: SD1D_RS00180
location: 38280..41366
location: region:38280-41366:1
so has part: feature:38280-41366:1:exon

WP_058257057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38280-41366:1:exon

SD1D_RS12530
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12530
old locus tag: SD1D_0038
so part of: sequence
location: 41406..42980
location: region:41406-42980:1
so has part: feature:41406-42980:1:exon
subclass of: SO_0000010

position:41406:1
position: 41406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42980:1
position: 42980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41406-42980:1:exon

SD1D_RS12530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12530
old locus tag: SD1D_0038
inference: COORDINATES: protein motif:HMM:NF012874.2
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellin
translation: MRINHNISALKANNQLARTNKLLDASLKRLSSGYRINSAADDSAGLAISEKMKTQISGLEQASRNASDGISVIQTAEGALIEVESMLQRMRELAVQSANGIYTIEDRKAIQAEIDQLNEEINRISENTEFNTMTLLDGNIDRKSFSSNNKVNLIALSDTVGIGNYAIKITQDARQAVVVGGSVDFGEGDYTPTTRKISASEAGSININGETVKVNEGDTVDEVFQKLRDVCDSVNVNVFAANSDAVPDTDTNHDLAGYTSKQLAGGDKLIFVSREYGSDQKITIHCDKPELSKLLGLTVKGVEARGIDAKAEIDLDKGKPESLFENTATVSIRGNKITVSDRNNFKMIFEVDPGSVKTEFTDATINGPEDDFTQGGIGEEEKSIDITVSVLDAGPMDLQIGANEGQTMSIRIPRVTPRTLGIDKINIGTADGAQRAIALLDNAINEVSAIRSKLGAYQNRLEHSISNLDVTAENMTESLSRIEDVDMAEEMAEYTQKNVLAQAGTSMLAQANMRPQNILSLLQQ
SIO_010081: SD1D_RS12530
subclass of: SO_0000673
so part of: SD1D_RS12530
location: 41406..42980
location: region:41406-42980:1
so has part: feature:41406-42980:1:exon

WP_058257058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41406-42980:1:exon

SD1D_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00190
old locus tag: SD1D_0039
so part of: sequence
location: 43026..43505
location: region:43026-43505:1
so has part: feature:43026-43505:1:exon
subclass of: SO_0000010

position:43026:1
position: 43026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43505:1
position: 43505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43026-43505:1:exon

SD1D_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00190
old locus tag: SD1D_0039
inference: COORDINATES: protein motif:HMM:NF014604.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein FliS
translation: MNKEAIQSFTARISQASRSELVVILYEITLAKIEEAEKFFKDNNLREFDRELRGAQKCVSELMSSLDYRYKISYDLQSLYMYTNKHIITAIVKQNPISLQYAKSILQKLLVGFVEVSKADKSGPIMQNTQQLYAGLTYSKGTLNETFIDPANKSRGFIA
SIO_010081: SD1D_RS00190
subclass of: SO_0000673
so part of: SD1D_RS00190
location: 43026..43505
location: region:43026-43505:1
so has part: feature:43026-43505:1:exon

WP_058257059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43026-43505:1:exon

SD1D_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00195
old locus tag: SD1D_0040
so part of: sequence
location: complement(43639..43866)
location: region:43639-43866:-1
so has part: feature:43639-43866:-1:exon
subclass of: SO_0000010

position:43639:-1
position: 43639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43866:-1
position: 43866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43639-43866:-1:exon

SD1D_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00195
old locus tag: SD1D_0040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012740204.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YaaL family protein
translation: MRLFSKKKAPKEDFLLKEINKTKMALEAAYSQFEYVVDPDLIDSCIYELNAIQNRYKYLLKQAKASEKNYIESKS
SIO_010081: SD1D_RS00195
subclass of: SO_0000673
so part of: SD1D_RS00195
location: complement(43639..43866)
location: region:43639-43866:-1
so has part: feature:43639-43866:-1:exon

WP_058257060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43639-43866:-1:exon

SD1D_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00200
old locus tag: SD1D_0041
so part of: sequence
location: 44001..44273
location: region:44001-44273:1
so has part: feature:44001-44273:1:exon
subclass of: SO_0000010

position:44001:1
position: 44001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44273:1
position: 44273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44001-44273:1:exon

SD1D_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00200
old locus tag: SD1D_0041
inference: COORDINATES: protein motif:HMM:NF019085.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pro-sigmaK processing inhibitor BofA family protein
translation: MEKIVLAIIILVCIVIIGICIAKKRPDLIVDFLLRASLGTAGIYLLDFIIGLGGYNVNVGVNVITILANGFLGLPGFILLYGLAFYYSMS
SIO_010081: SD1D_RS00200
subclass of: SO_0000673
so part of: SD1D_RS00200
location: 44001..44273
location: region:44001-44273:1
so has part: feature:44001-44273:1:exon

WP_058257061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44001-44273:1:exon

SD1D_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00205
old locus tag: SD1D_0042
so part of: sequence
location: 44423..45412
location: region:44423-45412:1
so has part: feature:44423-45412:1:exon
subclass of: SO_0000010

position:44423:1
position: 44423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45412:1
position: 45412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44423-45412:1:exon

SD1D_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00205
old locus tag: SD1D_0042
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKLLAIYDPEILYASRLMEYFRKSEWEGFEILLFTGMDHLTDFLKYQKLEILLYGGEALLDKLSLDNVRYIFLLSSNNKPIRDKYQRIYKYQSASKIKSDILSSYTRLEDNNKKAAYDDVRFISIYPPVSGPEKLTFAWFLAKELSNNYKVLFISMEMLATSFITGDEVISQSMSEYLYYLKESKEGLDTKLKSYLSYSEKLSYLSGLSHGFDLLSLSKEDIVRLMDMLKEQGDYELVIFYLGFYSEASMEILNRSTDVYIALCDIPYEEFVYKEWERQMELIGLINHQCKYRKIKLSSLYQGAGSNPLHEISISAIKPLAKEMAKHM
SIO_010081: SD1D_RS00205
subclass of: SO_0000673
so part of: SD1D_RS00205
location: 44423..45412
location: region:44423-45412:1
so has part: feature:44423-45412:1:exon

WP_058257062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44423-45412:1:exon

SD1D_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00210
old locus tag: SD1D_0043
so part of: sequence
location: 45448..46659
location: region:45448-46659:1
so has part: feature:45448-46659:1:exon
subclass of: SO_0000010

position:45448:1
position: 45448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46659:1
position: 46659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45448-46659:1:exon

SD1D_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00210
old locus tag: SD1D_0043
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CpaF family protein
translation: MGWLKEKLKQDVLDSIDLSSDISDQELLSIIDEVLLQKSRQNFISMQEKRRLRRDIFNSIRKLDILQDMIEDPTITEIMVNGTKDIFIEQNGIIKTSDKCFESLEKLEDLVQQIVSQSNRIVNASKPIVDARLMDGSRVNIVLPPVAIDGPVITIRKFPKNPITIDQLIEYKSITKEAADFLEKLVISGYNIFISGGTGSGKTTFLNVLSNYIPHYQRIITIEDSAELQIRNIPNLIRLEVRCGNTEGNNEITIRDLIKTSLRMRPDRIIVGEVRDEAAIDMLQALNTGHDGSLSTGHANSPSDMLSRLESLVLLGADIPLMAIRRQIASAIDIIVHLGRLRDKSRRVLEITEVLDLEDGEIKLNPIFTFVERGEDKNMIIGKLEKTGNLQNIQKLDRAGIKL
SIO_010081: SD1D_RS00210
subclass of: SO_0000673
so part of: SD1D_RS00210
location: 45448..46659
location: region:45448-46659:1
so has part: feature:45448-46659:1:exon

WP_058257063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45448-46659:1:exon

SD1D_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00215
old locus tag: SD1D_0044
so part of: sequence
location: 46674..47390
location: region:46674-47390:1
so has part: feature:46674-47390:1:exon
subclass of: SO_0000010

position:46674:1
position: 46674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47390:1
position: 47390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46674-47390:1:exon

SD1D_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00215
old locus tag: SD1D_0044
inference: COORDINATES: protein motif:HMM:NF012694.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system F family protein
translation: MIEKESIRIIIEGFIGVIILGFLFYRSIIGIIFLSPLIILYYQKKRKVIIAKRKLQLNIEFRDGINSLSAALSAGYSVEQGFTEALLDLKSMYPKGAMIINEFAYITKQIQMNIPVEKALRDFASRSGIEDIISFSEVFSTAKRTGGDLTKIIKTTTDIISNKIEVKREIVTLIAAKKFEANIMKIVPAGILCYLSLSSPEMLKPLYHNLFGILIMTFILGVYLCSYKLIDKIVDIEV
SIO_010081: SD1D_RS00215
subclass of: SO_0000673
so part of: SD1D_RS00215
location: 46674..47390
location: region:46674-47390:1
so has part: feature:46674-47390:1:exon

WP_058257064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46674-47390:1:exon

SD1D_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00220
old locus tag: SD1D_0045
so part of: sequence
location: 47402..48886
location: region:47402-48886:1
so has part: feature:47402-48886:1:exon
subclass of: SO_0000010

position:47402:1
position: 47402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48886:1
position: 48886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47402-48886:1:exon

SD1D_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00220
old locus tag: SD1D_0045
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLYGIIIIFFVILFFFSKRQMGSTFNSIDKKKHRLYFLYPMARFILIRAGLEEKCLKQSEVSKNIRALYVLEGHENQTRLYWYQKTSLVLLIIFIFSSLSFFISIESYMNKSVSFDNHLIRPEEEEGDNRIRLRYKIQNREDLKDFYEDEITIENKARIYSHKEWDELLNIAIPYLEKEMLGENEEASHVHRNLNFIKKIPKTGISIEWIPKDYKLIDSRGIIHNEDMVEDKVETLVTAILRYHDRKVEHIIPITIVPPIMDNKDILQRELESIIDETNEATAMDKKWSLPKKIGDYLVIWERDEKNISMPIFILGLTGAILIWFFCDKELDNKMKLRNNQLLLDYPEIINKFILLINAGMTIKQAWSKIAEDYRQKLNKGEINIRYAYEEMLVTLNELKLGIPEAKAYEQYGKRVALLPYMKFTSLIVQNLRKGNKGLADLLNNEAMEALHTRREISRRLGEEASTKLIGPMIIMLFIVLIIIMVPAIISIRM
SIO_010081: SD1D_RS00220
subclass of: SO_0000673
so part of: SD1D_RS00220
location: 47402..48886
location: region:47402-48886:1
so has part: feature:47402-48886:1:exon

WP_058257065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47402-48886:1:exon

SD1D_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00225
old locus tag: SD1D_0046
so part of: sequence
location: 48925..49098
location: region:48925-49098:1
so has part: feature:48925-49098:1:exon
subclass of: SO_0000010

position:48925:1
position: 48925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49098:1
position: 49098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48925-49098:1:exon

SD1D_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00225
old locus tag: SD1D_0046
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015552887.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Flp1 family type IVb pilin
translation: MIRNLKRLINTELDGVGVIEIILILVVLIGLVIIFRDQLGEIISNIFDRINEAIDSF
SIO_010081: SD1D_RS00225
subclass of: SO_0000673
so part of: SD1D_RS00225
location: 48925..49098
location: region:48925-49098:1
so has part: feature:48925-49098:1:exon

WP_087758699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48925-49098:1:exon

SD1D_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00230
old locus tag: SD1D_0047
so part of: sequence
location: 49120..51627
location: region:49120-51627:1
so has part: feature:49120-51627:1:exon
subclass of: SO_0000010

position:49120:1
position: 49120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51627:1
position: 51627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49120-51627:1:exon

SD1D_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00230
old locus tag: SD1D_0047
inference: COORDINATES: protein motif:HMM:NF039199.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5702 domain-containing protein
translation: METLKKERYLYGSITVFLSLTLLLILSLLMTIIEGARHHTARVIAERSLTLAMDSVLAEFYGPFMDEYHLLGLDSSYGEPICSDYEITRRIEEYMSYTLTPKLGLESNVNPVELFGISIESLKLNSKTGLMDYGGDIFIHEITEYMKYKELGDIAEFFLNKASILEQPKKLSILYEEKIKVEEEILAIDEGVLALMKYIDGISTNKKGLVRSKNTGLKIESFFAKKIMFETPTMESTGINNERVFYALEKYYSNPSKLFVTVDKEFQKLSEISTYLEDLEKSLQKIQGEKEENTYLLKQLTKNMDDRDDLEADILNLENKISELERFADDIEANMADYNKELIVCTETITKKVNELNKLISGCITAVKQAILQLEQILITIEKAQPLILSYEKNLENKKEELSKDIYESLQEGLEELKKYQKDIGTGYNFPLMKDILEKNYEILLKSERNLDQAYKKLSDKDFDGAKSIYSNTYRILQEYQTKNLNLDYSSLVTYKDKTPDFIGQFKKLLEEGICALVVDYETMSSKELGNFGELPSKTAGLSKEDDQFSFLTLLNKLNLGGKNSGLDSFFQSFGDYSIDSLLKEAIDNIAKRFLLIEYINQHFYRFPCENESKETKKPSVLTYEKEYLLFGKLKDKDNLEDIIKKIILIRTLLNFTSILTDKEKWQEAKTIAATLVGFMGLPILVTITQSILMFLLAFGSGLIDTSALLMGKEIPILKKRVDLKFAELLLLNKEYIEKKAASYKEEKGFSYNDYLTLFLYFTDLDKLSFRMMDLMQENINLRYGSNFRISNCIFGFETEAVFHIKPIFTSLSFLKKILKSDFNQIYIVQGDYSY
SIO_010081: SD1D_RS00230
subclass of: SO_0000673
so part of: SD1D_RS00230
location: 49120..51627
location: region:49120-51627:1
so has part: feature:49120-51627:1:exon

WP_058257066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49120-51627:1:exon

SD1D_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00235
old locus tag: SD1D_0048
so part of: sequence
location: 51830..52723
location: region:51830-52723:1
so has part: feature:51830-52723:1:exon
subclass of: SO_0000010

position:51830:1
position: 51830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52723:1
position: 52723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51830-52723:1:exon

SD1D_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00235
old locus tag: SD1D_0048
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: pilus assembly protein
translation: MKKTKNIKGINKYIANASLTIEASLVLPIFLFFFTAFLYFIQIFIVQEMLQKAITETGLSMSRAAYIYSDFYDVSDSKTFDEALLEENIQRGFKELYRTIIYKGAIKYAVESRLNLDRINNSCIVGGFDGIDFSSSQVFKCSNDIDIVARYRVRIPIRIFGIYEMDMIQRVRLRGWSGHKIPALYRVIEENNGKEESFVYVTDSGSVYHLDRTCSHISLSVEAISGKPTWQRNKNGGKYYPCEYCLKNEDSQEEIYYITSYGNRYHKDKSCPKINRRVSKIPITEVGERVPCKRCGR
SIO_010081: SD1D_RS00235
subclass of: SO_0000673
so part of: SD1D_RS00235
location: 51830..52723
location: region:51830-52723:1
so has part: feature:51830-52723:1:exon

WP_058257067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51830-52723:1:exon

SD1D_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00240
old locus tag: SD1D_0049
so part of: sequence
location: 52742..53185
location: region:52742-53185:1
so has part: feature:52742-53185:1:exon
subclass of: SO_0000010

position:52742:1
position: 52742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53185:1
position: 53185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52742-53185:1:exon

SD1D_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00240
old locus tag: SD1D_0049
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWEFIVRVLLGLFLMVVAIKDLISKKISLWIVILCIILLSICIPFCKALTLLDRILGISLGLGVLILSKITEGKIGMGDGLVLSVTGMGLGFWSNLELFALALAFAALFSMFLLVFRLAGRKNSIPFLPFMFISYLFLCIPVWSEII
SIO_010081: SD1D_RS00240
subclass of: SO_0000673
so part of: SD1D_RS00240
location: 52742..53185
location: region:52742-53185:1
so has part: feature:52742-53185:1:exon

WP_058257068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52742-53185:1:exon

SD1D_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00245
old locus tag: SD1D_0050
so part of: sequence
location: 53209..53775
location: region:53209-53775:1
so has part: feature:53209-53775:1:exon
subclass of: SO_0000010

position:53209:1
position: 53209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53775:1
position: 53775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53209-53775:1:exon

SD1D_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00245
old locus tag: SD1D_0050
inference: COORDINATES: protein motif:HMM:NF019428.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilus assembly protein
translation: MKKKIQGSFTIEALLLMPIILFTIFFVLYLSFYFYDYCRVQAVADQFIHKLSINLKHESDIRTGKISYESIARQGVFYHAAGNLNNKKNEIKNYLVNKLSKGLLITKITDIQVSANISEIYIKIEGKLQVPIRAISRIISKKEAFVIEAKGSFHYPAGTVRISEIVLDLGKKIKNIDELKEKIELLLP
SIO_010081: SD1D_RS00245
subclass of: SO_0000673
so part of: SD1D_RS00245
location: 53209..53775
location: region:53209-53775:1
so has part: feature:53209-53775:1:exon

WP_058257069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53209-53775:1:exon

SD1D_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00250
old locus tag: SD1D_0051
so part of: sequence
location: 53829..55196
location: region:53829-55196:1
so has part: feature:53829-55196:1:exon
subclass of: SO_0000010

position:53829:1
position: 53829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55196:1
position: 55196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53829-55196:1:exon

SD1D_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00250
old locus tag: SD1D_0051
inference: COORDINATES: protein motif:HMM:NF039422.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6382 domain-containing protein
translation: MEVSYKKDLRNNYLVVEKKDNNDEEAYCVRMILANSITGIIKPEQRNIDGQILYYYDISSKQPLDIIYEKKPINFNQVNKLFTGLIEIMEQAYEFLLNENDLVMEPAHIYIDISTEQANLCYVPGYNKDIRKQIANLIEYIMNKIDYKDKEAVLLVYNLYAICRKDSFSYEDLLSVIRKKSRQDSKIEIEEIGKGEREESKPEAAIKDQIPNEQIPVMMEKILDDQEHYYFPLKTYIYTGICCLCFIFTLILSIKSKLIYTFFGTRIDYSKFMVLLLILLCIMGYVLRKIWDKKNRLTKLIRKEEYIDPRKEDISLKASIEDCLDETLSKSNRDLLNNNDSDILNPTVLLNEARVCKCYLEPINHKINKIIEMDNFPFVIGKYKNNVDYLLDKEVVSRYHLKITMEDDKYYITDLNSTNGTYLNEKPLPCYKKHEIVSGDEVSIAGIKYIFRLDK
SIO_010081: SD1D_RS00250
subclass of: SO_0000673
so part of: SD1D_RS00250
location: 53829..55196
location: region:53829-55196:1
so has part: feature:53829-55196:1:exon

WP_058257070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53829-55196:1:exon

SD1D_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: glpK
locus tag: SD1D_RS00255
old locus tag: SD1D_0052
so part of: sequence
location: 55347..56840
location: region:55347-56840:1
so has part: feature:55347-56840:1:exon
subclass of: SO_0000010

position:55347:1
position: 55347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56840:1
position: 56840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55347-56840:1:exon

SD1D_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: glpK
locus tag: SD1D_RS00255
old locus tag: SD1D_0052
EC number: 2.7.1.30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003359217.1
GO function: GO:0004370 - glycerol kinase activity [Evidence IEA]
GO process: GO:0006071 - glycerol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol kinase GlpK
translation: MKKYVMALDQGTTSSRCIIFDKSGKIKSMAGKEFTQIYPKAGWVEHNPMEIWSSQISVATEAMAKLGIEAGEIASIGITNQRETTIIWNKNTGQPIYNAIVWQCRRTSDMIDELKEKGLEPYIRETTGLIPDAYFSATKIKWILDNVPGARKEAEKGNLLFGTVDSWLIWNLTKGKVFVTDYTNASRTMMFDIKKLKWDERILRELNIPYSMLPEVKPSSYTYGYTDKSLFGEEIPISGAAGDQQAALFGQCCFEKGEAKNTYGTGCFLLMNTGEEVVKSKQGLLTTIAACTDDKVIYALEGSVFVAGAAIQWLRDELRLIHTASESEKYAYEVNDTNGIYVVPAFTGLGAPYWDQYARGAIVGITRGCNREHIIRATLESIAYQTYDVIKAMESDLDGSLKTLRVDGGASVNNFLMQFQADILNTQVLRPECIETTALGAAYLAGLSVGFWKDKEEIKKNWALSKTFEPNMDEKSREELIKGWRKAVNRSFNWEKE
SIO_010081: SD1D_RS00255
subclass of: SO_0000673
so part of: SD1D_RS00255
location: 55347..56840
location: region:55347-56840:1
so has part: feature:55347-56840:1:exon

WP_058257071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55347-56840:1:exon

SD1D_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00260
old locus tag: SD1D_0053
so part of: sequence
location: 56858..57943
location: region:56858-57943:1
so has part: feature:56858-57943:1:exon
subclass of: SO_0000010

position:56858:1
position: 56858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57943:1
position: 57943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56858-57943:1:exon

SD1D_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00260
old locus tag: SD1D_0053
EC number: 3.4.21.-
inference: COORDINATES: protein motif:HMM:NF013827.2
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhomboid family intramembrane serine protease
translation: MKIEDGIIKQLADQGYLKLNIKISNMDLFYRADAFSTDIVLLLRVISGKEITVEEYKLIINNVKNHFTQAGFSDIHLLGLIITAMPKKAKQYCLEEDDHFIIDLWNRQLIVYENQSPYFSELISIVEDIIHDLSYDTGINKKGYYKDDNRKVQWITLFNTLFIVINIIIYLLVHHTSILGETDFVLHRGALSWYLIKEKGEHYRILSSMFLHSDFEHLANNMLVLFFVGDNLERAVGKIKYLIIYFGSGIIAGLSSISYNMLKREFVMSIGASGAIFGIVGAMGYILLINKGRVKNTSSIQIVLFTVFSLYGGVANANIDNVAHIGGFIGGVILAFLLYGKPKRQMEAKGGYTYQSGQEED
SIO_010081: SD1D_RS00260
subclass of: SO_0000673
so part of: SD1D_RS00260
location: 56858..57943
location: region:56858-57943:1
so has part: feature:56858-57943:1:exon

WP_058257072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56858-57943:1:exon

SD1D_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00265
old locus tag: SD1D_0054
so part of: sequence
location: 57947..58942
location: region:57947-58942:1
so has part: feature:57947-58942:1:exon
subclass of: SO_0000010

position:57947:1
position: 57947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58942:1
position: 58942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57947-58942:1:exon

SD1D_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00265
old locus tag: SD1D_0054
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015567893.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCP2 sterol-binding domain-containing protein
translation: MKINIYYGGRGLIEDPTIYVINKLTEVLEELRVDVSRYNLYEEKNSIAMLPKTLKDADGVILATTVEWMGIGGLMQQFLDACWLYGDKEKIEKLYMLPVVTASTYGEREAQLTLIQAWGMLGGVTYDGLSAYVEDYLEFETNREYAITIEKKAESFYRVINQERRMLPASNIVIRQNLLKSNSMILTPQESEQLSIYASDDVYVKKQKQDIEELTRIYKEMLEGAGDNDSYQEFIPNLKENFCPMEDFKASYAIDLTDINKTLVVEVDGSMLNCYYGKKADADVIAKTSREVMNSLILGKITFQGAFMSGKLTAKGNFKTLRSFDQVFSFK
SIO_010081: SD1D_RS00265
subclass of: SO_0000673
so part of: SD1D_RS00265
location: 57947..58942
location: region:57947-58942:1
so has part: feature:57947-58942:1:exon

WP_058257073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57947-58942:1:exon

SD1D_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00270
old locus tag: SD1D_0055
so part of: sequence
location: complement(58949..59662)
location: region:58949-59662:-1
so has part: feature:58949-59662:-1:exon
subclass of: SO_0000010

position:58949:-1
position: 58949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59662:-1
position: 59662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58949-59662:-1:exon

SD1D_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00270
old locus tag: SD1D_0055
inference: COORDINATES: protein motif:HMM:NF014567.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MNQEINPITEEAIQAIMEKHKRTISMFIHELRNPLSLIKGTLQYIEMKHPETKDYKYWNQIFELINDMEKMISDASLLNSCTTLNIQESNLLSLIQDLVDNYMPQAVNQKKQLYIKASPECEQSISSYPCDATKIKQAISNLLKNALEATNEGNYIEVLINIDSTSAHPLLSIQINNNGKPIPEDEIDEIFKPFVTHKKGGTGIGLALAKFIIENHLGSIRVSSSDALTSFTILLPL
SIO_010081: SD1D_RS00270
subclass of: SO_0000673
so part of: SD1D_RS00270
location: complement(58949..59662)
location: region:58949-59662:-1
so has part: feature:58949-59662:-1:exon

WP_058257074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58949-59662:-1:exon

SD1D_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00275
old locus tag: SD1D_0056
so part of: sequence
location: 59790..60203
location: region:59790-60203:1
so has part: feature:59790-60203:1:exon
subclass of: SO_0000010

position:59790:1
position: 59790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60203:1
position: 60203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59790-60203:1:exon

SD1D_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00275
old locus tag: SD1D_0056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008706974.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HIT domain-containing protein
translation: MDNCIFCKIISGDIPSSVLYEDEAFKVIMDISPAAKGHAIIIPKKHFANLFELEDDFANKLLIVAKKVAKAMKKELECDGINLLQNNGEAAGQSVFHIHFHLIPRYHDDKVKITWTPGQYKDGEAKELADKIARHIS
SIO_010081: SD1D_RS00275
subclass of: SO_0000673
so part of: SD1D_RS00275
location: 59790..60203
location: region:59790-60203:1
so has part: feature:59790-60203:1:exon

WP_058257075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59790-60203:1:exon

SD1D_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00280
old locus tag: SD1D_0057
so part of: sequence
location: complement(60281..61345)
location: region:60281-61345:-1
so has part: feature:60281-61345:-1:exon
subclass of: SO_0000010

position:60281:-1
position: 60281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61345:-1
position: 61345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60281-61345:-1:exon

SD1D_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00280
old locus tag: SD1D_0057
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201722.1
GO function: GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
translation: MKRIVLTGGGTAGHVTPCIAMLPALKKEGYDIHYIGSYKGIERKLIKEYDIPYYGISSGKLRRYLDLKNFTDPFKVLKGYFEAYKILKKIKPDILFSKGGFVTVPVVLAAKRCKIPIIIHESDMTPGLANKIAIPAAQKVCVNFPETMNHIPQKKAVLTGTPIRKELFSGNKIKGLDFCGFTANKPVILVIGGSSGSKVINDVIRGMLPTLLRDFQVVHLCGKGNLDPKLDNLEGYAQFEYIKKELSDLFAAANLVISRAGANAICEILALKIPNILIPLSLKASRGDQILNAESFESQGYSYVIKEEDLSVSSLMEAIQTVINNKHSYIEAMKKSKLNDSIDVIMNLIKETQL
SIO_010081: SD1D_RS00280
subclass of: SO_0000673
so part of: SD1D_RS00280
location: complement(60281..61345)
location: region:60281-61345:-1
so has part: feature:60281-61345:-1:exon

WP_058257076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60281-61345:-1:exon

SD1D_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00285
old locus tag: SD1D_0058
so part of: sequence
location: complement(61342..61590)
location: region:61342-61590:-1
so has part: feature:61342-61590:-1:exon
subclass of: SO_0000010

position:61342:-1
position: 61342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61590:-1
position: 61590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61342-61590:-1:exon

SD1D_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00285
old locus tag: SD1D_0058
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006568155.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR03905 family TSCPD domain-containing protein
translation: MVYKTSGVCCTEIHIDIEDNGIIKSVQFHKGCAGNASGLSRLLVGMKVDDVIERLMGTTCGNKATSCPDQLAKALMKWRSSK
SIO_010081: SD1D_RS00285
subclass of: SO_0000673
so part of: SD1D_RS00285
location: complement(61342..61590)
location: region:61342-61590:-1
so has part: feature:61342-61590:-1:exon

WP_058257077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61342-61590:-1:exon

SD1D_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00290
old locus tag: SD1D_0059
so part of: sequence
location: 62002..62703
location: region:62002-62703:1
so has part: feature:62002-62703:1:exon
subclass of: SO_0000010

position:62002:1
position: 62002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62703:1
position: 62703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62002-62703:1:exon

SD1D_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00290
old locus tag: SD1D_0059
EC number: 3.2.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201724.1
GO function: GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO process: GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'-methylthioadenosine/adenosylhomocysteine nucleosidase
translation: MKKIGIIGAMDEEVNRLKEMMQEVKIKNIASMDFYEGSFEGSPLVVVRSGIGKVNAAICTQILVDLYDIDLVINTGVAGSLRNEINIADIVISTDALQHDVDARGFGYELGVIPRMEASIFKADNDLLNLAKSVCKEVLPSLGVYTGRVVSGDQFISDSKKKEWLIKTFDGYCTEMEGAAIAQAAYLNKIPFLIIRAISDKADHSAEMDYTEFEKIAIDNTVKLLRALIKKIN
SIO_010081: SD1D_RS00290
subclass of: SO_0000673
so part of: SD1D_RS00290
location: 62002..62703
location: region:62002-62703:1
so has part: feature:62002-62703:1:exon

WP_058257078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62002-62703:1:exon

SD1D_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: spoIID
locus tag: SD1D_RS00295
old locus tag: SD1D_0060
so part of: sequence
location: complement(62739..63710)
location: region:62739-63710:-1
so has part: feature:62739-63710:-1:exon
subclass of: SO_0000010

position:62739:-1
position: 62739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63710:-1
position: 63710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62739-63710:-1:exon

SD1D_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: spoIID
locus tag: SD1D_RS00295
old locus tag: SD1D_0060
inference: COORDINATES: protein motif:HMM:TIGR02870.1
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage II sporulation protein D
translation: MKKILYKVVAVSILVLLLPFIMTLIFSNNNKRNHSLALEAMGLNIYYEKNGTRQKLDFDQYLIGVVAANMPSGYNIEALKAQAVVSRTYALYNISLLTEDNPNKKEFTTSELGLSYISPEEMETYWGSENYLKNFTKLENCVYGTKDEVIVYKDSLILPVFFGTGTGFTRNAHEAWGVDLPYLISVPSKDDVTSIHYLKITEYAPEELIGLLKQAYPSFESGEKTIFEDIIISGRDSTGYVTEIKLGNISLSGEEFARTLGLNSNHFYIEDYEGKARIICTGVGHGVGLSQYGANAMAEQGISYDKILTHYYTGVKIINLDNT
SIO_010081: SD1D_RS00295
subclass of: SO_0000673
so part of: SD1D_RS00295
location: complement(62739..63710)
location: region:62739-63710:-1
so has part: feature:62739-63710:-1:exon

WP_058257079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62739-63710:-1:exon

SD1D_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00300
old locus tag: SD1D_0061
so part of: sequence
location: 63882..64277
location: region:63882-64277:1
so has part: feature:63882-64277:1:exon
subclass of: SO_0000010

position:63882:1
position: 63882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64277:1
position: 64277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63882-64277:1:exon

SD1D_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00300
old locus tag: SD1D_0061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009243399.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDKLRKFMMGRYGIDALSRFIFALALILLVISRFYLRDFFYIISLMTILYGYYRIFSRNIDRRYRENNLYLAYMNKLKKLLHKQKYMFKQRKVYRIYSCPNCKQKIRVPKGKGKIMITCPKCRNEFIKRS
SIO_010081: SD1D_RS00300
subclass of: SO_0000673
so part of: SD1D_RS00300
location: 63882..64277
location: region:63882-64277:1
so has part: feature:63882-64277:1:exon

WP_058257080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63882-64277:1:exon

SD1D_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00305
old locus tag: SD1D_0062
so part of: sequence
location: complement(64367..65290)
location: region:64367-65290:-1
so has part: feature:64367-65290:-1:exon
subclass of: SO_0000010

position:64367:-1
position: 64367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65290:-1
position: 65290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64367-65290:-1:exon

SD1D_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00305
old locus tag: SD1D_0062
inference: COORDINATES: protein motif:HMM:NF022779.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3137 domain-containing protein
translation: MKKDKISYLEKLRKKVLTHLIIIIVASIIVAITIGIIVSPKVKAINIVLVIFIISGLVTYFLLNLITGYKKKFKDYKAYYKKLMVEEPFQETFGHVNFDYKKGIDKDTIKNTGIMSLGNRYYSNDYLQGSYKGVRFERADIKIQNRVYTGKHSFTVTYFNGRWITLEFDGNYNFNLQIIGKGFKHASTKSSFFRKKECRRSKIELEDKVFNELFTVYAQSDHEAKYILTPEFIDTLKNMFYAIDGNFMLGFIDNKLHVAINTNKDAMEPSLIKNLYTTIDVQKEIKIIINIIEKIKPSLYLQFKWNL
SIO_010081: SD1D_RS00305
subclass of: SO_0000673
so part of: SD1D_RS00305
location: complement(64367..65290)
location: region:64367-65290:-1
so has part: feature:64367-65290:-1:exon

WP_058257081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64367-65290:-1:exon

SD1D_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00310
old locus tag: SD1D_0063
so part of: sequence
location: complement(65486..66370)
location: region:65486-66370:-1
so has part: feature:65486-66370:-1:exon
subclass of: SO_0000010

position:65486:-1
position: 65486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66370:-1
position: 66370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65486-66370:-1:exon

SD1D_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00310
old locus tag: SD1D_0063
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013658881.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX domain-containing protein
translation: MKETHNISERDYLDSYSINNYDRPSIATDMVVFTIKSEDAKNYRKLSQKELALLLIKRGEHPFKNQWALPGGFVRQGETLEEAACRELREEAGVTDITLTQLHTFSDIDRDPRGWIISCSFMALAQEERFRIKAGTDAIEADWFYVKFEKIKTESDNLVQGKITKNIYQLTLNGTESKLSALIEERIQYTSKKINTEYIILKSEDIAFDHSKIIAYAINTLRKNINNVMFASQLLPEYFTLTDLQTVYEKILGKELVTANFRRKISDYVIETGQKVKGAGHRPSKLYKCKFEAF
SIO_010081: SD1D_RS00310
subclass of: SO_0000673
so part of: SD1D_RS00310
location: complement(65486..66370)
location: region:65486-66370:-1
so has part: feature:65486-66370:-1:exon

WP_058257082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65486-66370:-1:exon

SD1D_RS12070
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12070
old locus tag: SD1D_0064
pseudo: true
so part of: sequence
location: complement(<66506..66646)
location: region:66506-66646:-1
so has part: feature:66506-66646:-1:exon
subclass of: SO_0000010

position:66506:-1
position: 66506
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:66646:-1
position: 66646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66506-66646:-1:exon

SD1D_RS12070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12070
old locus tag: SD1D_0064
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013656566.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nicotinamide phosphoribosyltransferase domain-containing protein
SIO_010081: SD1D_RS12070
subclass of: SO_0000673
so part of: SD1D_RS12070
location: complement(<66506..66646)
location: region:66506-66646:-1
so has part: feature:66506-66646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66506-66646:-1:exon

SD1D_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00315
old locus tag: SD1D_0065
so part of: sequence
location: complement(66688..67485)
location: region:66688-67485:-1
so has part: feature:66688-67485:-1:exon
subclass of: SO_0000010

position:66688:-1
position: 66688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67485:-1
position: 67485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66688-67485:-1:exon

SD1D_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00315
old locus tag: SD1D_0065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIQINGQKININHYPDGSLLLKLAIYGDKLEIQWFYKNDAELFVLICAVKHLRRINPGANISLYLPYIPHSRMDRIHKDCDVFTLKYFADIINSLEFDKVTVLDPHSSVSIALINNIHILSPLPYIKHTMDLILDMEGQAALLYYPDSNAAKKYSEIIPLPYCFGNKKHNWDNGEITGLDIIDNSNIIADRNILMIDDIISYGGSMYYSALALKKLGAKNIYAFASHVENSILEGNLIESGLVSRIYTTKSLFTGNHSLISVIQL
SIO_010081: SD1D_RS00315
subclass of: SO_0000673
so part of: SD1D_RS00315
location: complement(66688..67485)
location: region:66688-67485:-1
so has part: feature:66688-67485:-1:exon

WP_058257083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66688-67485:-1:exon

SD1D_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00320
old locus tag: SD1D_0066
so part of: sequence
location: complement(67496..68017)
location: region:67496-68017:-1
so has part: feature:67496-68017:-1:exon
subclass of: SO_0000010

position:67496:-1
position: 67496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68017:-1
position: 68017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67496-68017:-1:exon

SD1D_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00320
old locus tag: SD1D_0066
EC number: 3.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015514296.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isochorismatase family cysteine hydrolase
translation: MKKVLVVVDMQNDFIDGALGTKEAVSILPNVKRKIKEYKDAGHTVIFTRDTHDKNYLQTQEGKNLPVEHCIKGTHGWAISDQLDTAGSLIIDKPTFGSLSLMSVITTNYQDAAFELVGLCTDICVISNAIMIKAFLPEAKVNVDAACCAGVTPESHRNALKAMKMCQINILNE
SIO_010081: SD1D_RS00320
subclass of: SO_0000673
so part of: SD1D_RS00320
location: complement(67496..68017)
location: region:67496-68017:-1
so has part: feature:67496-68017:-1:exon

WP_058257084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67496-68017:-1:exon

SD1D_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00325
old locus tag: SD1D_0067
so part of: sequence
location: 68252..68623
location: region:68252-68623:1
so has part: feature:68252-68623:1:exon
subclass of: SO_0000010

position:68252:1
position: 68252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68623:1
position: 68623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68252-68623:1:exon

SD1D_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00325
old locus tag: SD1D_0067
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKGNNSLLKFIAGIVMLVVGLYWFMSSVTVTTGFYNFRIGHINSGGLVIVPFIVGICWMFANPDSIVAKIVTVLGLIIILVSIIAGTRFVFHRRNLYEYLLMLIFIFGGAAITLKMLFSKEN
SIO_010081: SD1D_RS00325
subclass of: SO_0000673
so part of: SD1D_RS00325
location: 68252..68623
location: region:68252-68623:1
so has part: feature:68252-68623:1:exon

WP_058257085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68252-68623:1:exon

SD1D_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00330
old locus tag: SD1D_0068
so part of: sequence
location: 68856..70916
location: region:68856-70916:1
so has part: feature:68856-70916:1:exon
subclass of: SO_0000010

position:68856:1
position: 68856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70916:1
position: 70916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68856-70916:1:exon

SD1D_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00330
old locus tag: SD1D_0068
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003514383.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 9 protein
translation: MKRVMAFILSAIIMVGVIPQPVMAADNQDFNYVDAFAKSILFYEANWCGPDAGNNRIKWRGPCHIEDGKDVGLDLTGGFHDCGDHVKFGLPQCASASTLAWAYYEFEDTFIEKGQDVYMLNILKHFCDYFMKCFPNKTTFYYQVGDGDVDHQYWGPPELQTYDRPTYYVATPSNPGSDVAGDAAAALAIMSIIYKDRDSEYAAKCLTYAKDLYNFGMTYRGNSKGQSYYLPSDYRDELMWGSIWLYVATGDKTYMDNVDKLMAEKNIGGDNMFNDHWTHCWDYVLTGVFVKLATLSDNPKYRRIAEDHMDYWQNRIRTTPGGLKYLDSWGVCKYPAAESFVQLVYYKETGEKKYLDFAKSQIDYILGKNPNNMSYVVGFGDKYPKYPHHRAANGMLEGPPADEKKDAGMRHILYGALVGGADINDKYIDDINEYVYTETGLDYNAGLVGALAGMSKYFGQGQVPEEVPGIEWEPTKYYTEAKLYKTSNEGVVIDLNLYNIATSPPQYEDDLTVKFFLDLSEYASVGIDPSKFSTQIYYSQANAKISSVMPWDKDNNIYYVEISFPDEKLYARTYVQFAIYNYQGKVWDSSNDHSTSKLTNTYKEIDNIPIYKKNVKVYGVDPSGEEEILYGDVNTDGVIDAIDLGLLKKYLLSMDEDTISIKNADLNQDGFVDAIDFAQLKKILLK
SIO_010081: SD1D_RS00330
subclass of: SO_0000673
so part of: SD1D_RS00330
location: 68856..70916
location: region:68856-70916:1
so has part: feature:68856-70916:1:exon

WP_058257086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68856-70916:1:exon

SD1D_RS12075
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12075
so part of: sequence
location: 71269..71457
location: region:71269-71457:1
so has part: feature:71269-71457:1:exon
subclass of: SO_0000010

position:71269:1
position: 71269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71457:1
position: 71457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71269-71457:1:exon

SD1D_RS12075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12075
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNHQFTVEQSLAKNMARLDKKKAFRQRAHAFSCSFQFLWLTVKKQGTTPQNSVVPCFYLSG
SIO_010081: SD1D_RS12075
subclass of: SO_0000673
so part of: SD1D_RS12075
location: 71269..71457
location: region:71269-71457:1
so has part: feature:71269-71457:1:exon

WP_157893074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71269-71457:1:exon

SD1D_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00335
old locus tag: SD1D_0069
so part of: sequence
location: complement(71449..71519)
location: region:71449-71519:-1
so has part: feature:71449-71519:-1:exon
subclass of: SO_0000663

position:71449:-1
position: 71449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71519:-1
position: 71519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71449-71519:-1:exon

SD1D_RS00335
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00335
old locus tag: SD1D_0069
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(71485..71487),aa:Gly,seq:ccc)
SIO_010081: SD1D_RS00335
subclass of: SO_0000673
so part of: SD1D_RS00335
location: complement(71449..71519)
location: region:71449-71519:-1
so has part: feature:71449-71519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71449-71519:-1:exon

SD1D_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00340
old locus tag: SD1D_0070
so part of: sequence
location: 71713..72582
location: region:71713-72582:1
so has part: feature:71713-72582:1:exon
subclass of: SO_0000010

position:71713:1
position: 71713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72582:1
position: 72582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71713-72582:1:exon

SD1D_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00340
old locus tag: SD1D_0070
inference: COORDINATES: protein motif:HMM:NF013700.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan DD-metalloendopeptidase family protein
translation: MNKRLAEFFKSKGYYVLLFVGIIAIAAVALIGSNLTSNSDEGENIVDLNEPDNNIEARDNNNNLQADNNDTSNQVANNEEVAGSGETGGGQNLANNDSLLEFDVYTREEENGIDLSENDESVQVADAEQDNNEQPQTVETTGSTVKNSPSLSFDAQQGLLWPVEGNVIMNYSMDHLTYHATLMQFKVNPAIIIDAEVGTEVKSAADGVITEIYDDPVTGLTVTMDIGDGYSLVYGQLKDVNYQVGDKLSEGEVIGLINEPTKYYTVEGSNLYFMVMEDGQTVNPMLLLR
SIO_010081: SD1D_RS00340
subclass of: SO_0000673
so part of: SD1D_RS00340
location: 71713..72582
location: region:71713-72582:1
so has part: feature:71713-72582:1:exon

WP_058257087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71713-72582:1:exon

SD1D_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00345
old locus tag: SD1D_0071
so part of: sequence
location: complement(72653..73165)
location: region:72653-73165:-1
so has part: feature:72653-73165:-1:exon
subclass of: SO_0000010

position:72653:-1
position: 72653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73165:-1
position: 73165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72653-73165:-1:exon

SD1D_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00345
old locus tag: SD1D_0071
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201725.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription repressor NadR
translation: MDGNTRREKLIEIIKNRKEPITGGELSQILGVSRQVIVQDIALLRAADYDIISTTKGYLLYQHNEPTYTRVINVKHSTDEIEDELCTIVDNGGKILDVHVIHEIYGRIVTDLIIRNRSDVYDFVKQVKEKKIVPLKELTAGTHSHTIEANSEEILDRIEESLRKKNYLID
SIO_010081: SD1D_RS00345
subclass of: SO_0000673
so part of: SD1D_RS00345
location: complement(72653..73165)
location: region:72653-73165:-1
so has part: feature:72653-73165:-1:exon

WP_058257088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72653-73165:-1:exon

SD1D_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00350
old locus tag: SD1D_0072
so part of: sequence
location: 73323..73592
location: region:73323-73592:1
so has part: feature:73323-73592:1:exon
subclass of: SO_0000010

position:73323:1
position: 73323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73592:1
position: 73592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73323-73592:1:exon

SD1D_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00350
old locus tag: SD1D_0072
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009256234.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFRLWAKIFKDNRMIKDMVVSNDNPNLRRTQKIFSAIDDICSAFDLPKPIWLDSTIADFKRYDKTRFVQDNFIEPIDFDYLEIHVIEED
SIO_010081: SD1D_RS00350
subclass of: SO_0000673
so part of: SD1D_RS00350
location: 73323..73592
location: region:73323-73592:1
so has part: feature:73323-73592:1:exon

WP_058257089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73323-73592:1:exon

SD1D_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00355
old locus tag: SD1D_0073
so part of: sequence
location: 73594..74451
location: region:73594-74451:1
so has part: feature:73594-74451:1:exon
subclass of: SO_0000010

position:73594:1
position: 73594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74451:1
position: 74451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73594-74451:1:exon

SD1D_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00355
old locus tag: SD1D_0073
inference: COORDINATES: protein motif:HMM:NF024929.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M15 family metallopeptidase
translation: MRGRCHKLFCILLLCLFMGSCDKYTGQDELKVQDNNRNIIKEINQKGDVNVVEKKDIQEEHLDGKELNKKYRDYPAGTEIDIEELNQESLKSLFYMEELNQEIINRINGKSYKENCDIPYSDLRYIRVLHIGFDGLTHIGEMIVNKAIAQDVIDIFWELYSISYPIEKMLLIDDYNADDLESMKDNNSSAFNFRFIEGTSKRSVHSDGLAIDINPLYNPYVRTREGKLEILPENAEEYVDRSIDNIYYIRKDDPCYEAFIKRGFTWGGEWKNSKDYQHFEKKIGD
SIO_010081: SD1D_RS00355
subclass of: SO_0000673
so part of: SD1D_RS00355
location: 73594..74451
location: region:73594-74451:1
so has part: feature:73594-74451:1:exon

WP_242955226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73594-74451:1:exon

SD1D_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: dnaX
locus tag: SD1D_RS00360
old locus tag: SD1D_0074
so part of: sequence
location: 74552..76123
location: region:74552-76123:1
so has part: feature:74552-76123:1:exon
subclass of: SO_0000010

position:74552:1
position: 74552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76123:1
position: 76123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74552-76123:1:exon

SD1D_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: dnaX
locus tag: SD1D_RS00360
old locus tag: SD1D_0074
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009254597.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MSYMALYRKFRPDNFKDVKGQDHIVTTLKNQIKSGRIGHAYLFTGTRGTGKTSVAKLFAKTVNCENPSDGNPCNECSLCKGIAAGTSMNVIEIDAASNNGVENVREIVEEVRYSPTEGKYKVYIIDEVHMLSTGAFNALLKTIEEPPSYVIFILATTEVHKIPVTILSRCQRYDFKRISIDIIADRLRELMDEEKIEIEDKALKYIARVADGSLRDALSLLDQCISFYLGKTITYDNVLDVLGTVDTKVFSKLLQSINNQDVSECIKILDEVEITGRELSQFVIDFIWYLRNLLLVKTTEDVTEIIIDISSENLLLLKQEAESIEVDILMRYIRIFSELSNQIRYASRKRVLLEIALIKVCRPQMEHNYDALINRIKALEEKLEQGIIVKSDDNKVETPKEESEPIKKQEILPQALPEDLKKVAGNWRGLLSQISKKAPALASVLRSATLSVDDNLGLVIVVTDPLDKELVDREGHKKVILDAIAAMLGKQAEISVRYLDKDKENINNLVDLTKIIKVPIEYE
SIO_010081: SD1D_RS00360
subclass of: SO_0000673
so part of: SD1D_RS00360
location: 74552..76123
location: region:74552-76123:1
so has part: feature:74552-76123:1:exon

WP_058257090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74552-76123:1:exon

SD1D_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00365
old locus tag: SD1D_0075
so part of: sequence
location: 76225..76578
location: region:76225-76578:1
so has part: feature:76225-76578:1:exon
subclass of: SO_0000010

position:76225:1
position: 76225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76578:1
position: 76578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76225-76578:1:exon

SD1D_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00365
old locus tag: SD1D_0075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007707933.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbaB/EbfC family nucleoid-associated protein
translation: MARRGGFPGGGIPGNMNNLMKQAQRMQKQMEEKTKELEEKTWEASAGGGAVTVTVSGKKEILSVKISQEVVDPDDVEMLEDLIVAATNEALRQMEEESAEVMSQITGGLGGLGGFPF
SIO_010081: SD1D_RS00365
subclass of: SO_0000673
so part of: SD1D_RS00365
location: 76225..76578
location: region:76225-76578:1
so has part: feature:76225-76578:1:exon

WP_058257091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76225-76578:1:exon

SD1D_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: recR
locus tag: SD1D_RS00370
old locus tag: SD1D_0076
so part of: sequence
location: 76578..77174
location: region:76578-77174:1
so has part: feature:76578-77174:1:exon
subclass of: SO_0000010

position:77174:1
position: 77174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76578-77174:1:exon

SD1D_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: recR
locus tag: SD1D_RS00370
old locus tag: SD1D_0076
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007707929.1
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination mediator RecR
translation: MDYYSSKISKLIEELSKLPGIGAKTAQRLAFHIINMPEDQVMELSNSIVDAKKKIQYCSECLTLTDRELCPICSSPKRNKRQIMVVENPRDLAAYEKTGKYEGVYHVLHGAISPMLGIGPGDIKLKELMTRLQQDVEEVIIATNSSLEGEATAMYISKLIKPAGIKVSRIASGIPVGGDLEYIDEVTLLRALEGRVEL
SIO_010081: SD1D_RS00370
subclass of: SO_0000673
so part of: SD1D_RS00370
location: 76578..77174
location: region:76578-77174:1
so has part: feature:76578-77174:1:exon

WP_058257092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76578-77174:1:exon

SD1D_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00375
old locus tag: SD1D_0077
so part of: sequence
location: 78597..79253
location: region:78597-79253:1
so has part: feature:78597-79253:1:exon
subclass of: SO_0000010

position:78597:1
position: 78597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79253:1
position: 79253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78597-79253:1:exon

SD1D_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00375
old locus tag: SD1D_0077
EC number: 2.1.-.-
inference: COORDINATES: protein motif:HMM:NF024880.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MDWNIIDLPVKDIYGKLDIGFTPIFKESMKIFKEMGYKRILDVGCGYGKHSIYLSENNFTVTSIDINEKAIEWLKEYINTKGISNVNLIKANANALPFENDYFDAIICSSVIHHHNLKGIKNSISEIYRVLKQNGCALVDFMSLEDDSFGLGEEVEKNTFIGSREGEEDVPHYYTDTSELKELFKNFRNISISKNEYHINIDLDNKIKSRMLDVKAYK
SIO_010081: SD1D_RS00375
subclass of: SO_0000673
so part of: SD1D_RS00375
location: 78597..79253
location: region:78597-79253:1
so has part: feature:78597-79253:1:exon

WP_058257093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78597-79253:1:exon

SD1D_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00380
old locus tag: SD1D_0078
so part of: sequence
location: 79277..79558
location: region:79277-79558:1
so has part: feature:79277-79558:1:exon
subclass of: SO_0000010

position:79277:1
position: 79277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79558:1
position: 79558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79277-79558:1:exon

SD1D_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00380
old locus tag: SD1D_0078
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKWKSKKPIKIFTLVCIIITVVSATINFLLPLLSLYKFKIHLNAYNSIGIIGGADGPTSVFVAYNSSPYLLTIIFGILSILGVVYLFITRKS
SIO_010081: SD1D_RS00380
subclass of: SO_0000673
so part of: SD1D_RS00380
location: 79277..79558
location: region:79277-79558:1
so has part: feature:79277-79558:1:exon

WP_058257094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79277-79558:1:exon

SD1D_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00385
old locus tag: SD1D_0079
so part of: sequence
location: 79587..80018
location: region:79587-80018:1
so has part: feature:79587-80018:1:exon
subclass of: SO_0000010

position:79587:1
position: 79587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80018:1
position: 80018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79587-80018:1:exon

SD1D_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00385
old locus tag: SD1D_0079
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009059794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKVVRKNINNLPYSLHDGVVIGFEVIGDNLIMKFQHGFLRTVEPFEQINGSIEIQKIDWDFSFVYLLDYQNVLCGNVGSFTGKKMELTTFINQFKNAEFNLIDETYGYNTSKFNGYFSEGDIFRECMIEIYHLGDMNYLVEG
SIO_010081: SD1D_RS00385
subclass of: SO_0000673
so part of: SD1D_RS00385
location: 79587..80018
location: region:79587-80018:1
so has part: feature:79587-80018:1:exon

WP_058257095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79587-80018:1:exon

SD1D_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00390
old locus tag: SD1D_0080
so part of: sequence
location: 80057..80443
location: region:80057-80443:1
so has part: feature:80057-80443:1:exon
subclass of: SO_0000010

position:80057:1
position: 80057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80443:1
position: 80443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80057-80443:1:exon

SD1D_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00390
old locus tag: SD1D_0080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKISLLLLLFIVLFGLLGCTRGSGIVRKSKEHNTPTKMSMTYEKFTGYRETEIKVDEDEPVDVLVDFVTEDGTINAYISKDNDKVSCDYEGHDVQTSSFTVTLSEQGTYTIRVDADAHKGSYLFSWE
SIO_010081: SD1D_RS00390
subclass of: SO_0000673
so part of: SD1D_RS00390
location: 80057..80443
location: region:80057-80443:1
so has part: feature:80057-80443:1:exon

WP_058257096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80057-80443:1:exon

SD1D_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00395
old locus tag: SD1D_0081
so part of: sequence
location: 80693..81205
location: region:80693-81205:1
so has part: feature:80693-81205:1:exon
subclass of: SO_0000010

position:80693:1
position: 80693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81205:1
position: 81205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80693-81205:1:exon

SD1D_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00395
old locus tag: SD1D_0081
inference: COORDINATES: protein motif:HMM:NF016763.2
GO component: GO:0005576 - extracellular region [Evidence IEA]
GO process: GO:0071555 - cell wall organization [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VanZ family protein
translation: MYFLDFFILVIIYFMFFYRKWSKGSKNMLLRNTTMYVYIMMVLFVTLMPFPIPFINGTNNLFIESINLIPFRDLRLNYGGAIREIILNIIMMVPFGFLYPIIKKKGVLRVTISTFLFSFVIEILQLMSAWWGGLSSRSFDVTDLITNTFGGLIGYIIFIVLRPLIQRIIK
SIO_010081: SD1D_RS00395
subclass of: SO_0000673
so part of: SD1D_RS00395
location: 80693..81205
location: region:80693-81205:1
so has part: feature:80693-81205:1:exon

WP_242955261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80693-81205:1:exon

SD1D_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00400
old locus tag: SD1D_0082
so part of: sequence
location: 81294..81878
location: region:81294-81878:1
so has part: feature:81294-81878:1:exon
subclass of: SO_0000010

position:81294:1
position: 81294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81878:1
position: 81878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81294-81878:1:exon

SD1D_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00400
old locus tag: SD1D_0082
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014253596.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6438 domain-containing protein
translation: MFEFIRLERTMCYGTCPVYSVQVDKYGNINYFGEAFVYKNGEHQWKISKKKVEQLNDLIENFGFKSFIYGPGKEFITDQPSCIKTVKYPDDEIKEIDHYLGHILLDEDLILFEKRIERILGTKKYVNPRLYIYQIKDINSEPSIMFIVISSSEKEAIDLIEKEYDNQKGLEWQANKIGVATDDYYGPTIVMKNN
SIO_010081: SD1D_RS00400
subclass of: SO_0000673
so part of: SD1D_RS00400
location: 81294..81878
location: region:81294-81878:1
so has part: feature:81294-81878:1:exon

WP_058257098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81294-81878:1:exon

SD1D_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00405
old locus tag: SD1D_0083
so part of: sequence
location: 82138..82341
location: region:82138-82341:1
so has part: feature:82138-82341:1:exon
subclass of: SO_0000010

position:82138:1
position: 82138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82341:1
position: 82341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82138-82341:1:exon

SD1D_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00405
old locus tag: SD1D_0083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005603655.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKNKLEEIRKEKGITQEELADALEVSRQTISSLENGRYNPSIILAFKISRYFNLSIEEIFIYEEEEA
SIO_010081: SD1D_RS00405
subclass of: SO_0000673
so part of: SD1D_RS00405
location: 82138..82341
location: region:82138-82341:1
so has part: feature:82138-82341:1:exon

WP_058257099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82138-82341:1:exon

SD1D_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00410
old locus tag: SD1D_0084
so part of: sequence
location: 82338..82832
location: region:82338-82832:1
so has part: feature:82338-82832:1:exon
subclass of: SO_0000010

position:82338:1
position: 82338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82832:1
position: 82832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82338-82832:1:exon

SD1D_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00410
old locus tag: SD1D_0084
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSINWTKEIFKLIFYIGSVVLLFILGKVVFDNTHYSSALIGVSGGFLGILIFQLIRMINFKRNPENYHKERIDFKDERNNMIISSAKSSAYDAEISTFLHHDYTYYSNFRCSDKKCNHSFKVPKLINVKLPSSEFKPQNFSFKGMRHIEFTSNNIYYKLYYTI
SIO_010081: SD1D_RS00410
subclass of: SO_0000673
so part of: SD1D_RS00410
location: 82338..82832
location: region:82338-82832:1
so has part: feature:82338-82832:1:exon

WP_058257100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82338-82832:1:exon

SD1D_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00415
old locus tag: SD1D_0085
so part of: sequence
location: 83058..84446
location: region:83058-84446:1
so has part: feature:83058-84446:1:exon
subclass of: SO_0000010

position:83058:1
position: 83058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84446:1
position: 84446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83058-84446:1:exon

SD1D_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00415
old locus tag: SD1D_0085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009064536.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serpin family protein
translation: MKEKKRSDDTIANISDELIEEASELKRGKKFSLWSKLTALVVFVVIIIALTLLFPREKNQNTEANINIVYPEAYAYGDFDTLKQVRDQNPIEDEFIKALNEFTYKTSANILTEAGKNINYSPISLYYALSLAASGAEGETEDQLLALLGVSDKEILSEQCGNLYRRLYKNNQVGKLKIANSLWIDDEFGGKPIIFKDEFVRQAAENFYASSHRVDFAKDETAREMADWISINTNGKLNPRIEINPNQILSIINTVYFYDQWIDRFDKSETVEDTFNLLNGSEVKVDFMNNTYGSVGFARGKDFTRASLGLKNSGEMVFILPDEGVSPYELIASSEKMKETFEGGESFVGEVVWKIPKFSFGSSLKLGNMLVNLGVTSAFKEDADFSGITDHMAYITDVIQETHIGIDEDGVEATAYTQVNFFGAMPPNGRADMILDRPFIYGIITHDDTILFIGVCENPAES
SIO_010081: SD1D_RS00415
subclass of: SO_0000673
so part of: SD1D_RS00415
location: 83058..84446
location: region:83058-84446:1
so has part: feature:83058-84446:1:exon

WP_058257101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83058-84446:1:exon

SD1D_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00425
old locus tag: SD1D_0087
so part of: sequence
location: 84817..85044
location: region:84817-85044:1
so has part: feature:84817-85044:1:exon
subclass of: SO_0000010

position:84817:1
position: 84817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85044:1
position: 85044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84817-85044:1:exon

SD1D_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00425
old locus tag: SD1D_0087
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCIIATIGIMLLLGYMSTFGGPGPLPAMTMVALILVIWIIAAIIMLVRSIVKKAIEYKDDYDGRSYVSKEESESN
SIO_010081: SD1D_RS00425
subclass of: SO_0000673
so part of: SD1D_RS00425
location: 84817..85044
location: region:84817-85044:1
so has part: feature:84817-85044:1:exon

WP_058257103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84817-85044:1:exon

SD1D_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00430
old locus tag: SD1D_0088
so part of: sequence
location: 85420..86106
location: region:85420-86106:1
so has part: feature:85420-86106:1:exon
subclass of: SO_0000010

position:85420:1
position: 85420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86106:1
position: 86106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85420-86106:1:exon

SD1D_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00430
old locus tag: SD1D_0088
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKRTISILFIVFVVCITLVACGKKELPFTHSPENDIIIDYMEEIIQNQEKYEGLYYDYASMRIAGVKSDELEQFITGLTEEALGQFTDNADKHIALKMSLDEYKEEIDEGAKTLVDNYLKYSRLGDKEAREFGLSKELEAQDPIGKVNQYMKDKKIEITEIIFPETFEDVNYDLYPMKYTYRYIIKGTVGKQAFEKEVVQDFYIGVDWSEGMGNIKDIIEYVRDVSK
SIO_010081: SD1D_RS00430
subclass of: SO_0000673
so part of: SD1D_RS00430
location: 85420..86106
location: region:85420-86106:1
so has part: feature:85420-86106:1:exon

WP_058257104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85420-86106:1:exon

SD1D_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00435
old locus tag: SD1D_0089
so part of: sequence
location: 86189..86947
location: region:86189-86947:1
so has part: feature:86189-86947:1:exon
subclass of: SO_0000010

position:86189:1
position: 86189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86947:1
position: 86947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86189-86947:1:exon

SD1D_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00435
old locus tag: SD1D_0089
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRNIFLLLTLLLVISVAVGCSQDDNQNGEPTAKTVEITSEANENEEEKTEVEKVEAVSEMFGIPEETAAYRLRDLTDTDDPHTQYILEEEVDDVFGIEGFRLTGNGEEGSHFLIYAEENEAFIFKSIENVLGDFKIVLQKAEPGTQYAQNIAYVLIREPFKSYRIEFEDGTPLRDIDIMANETALTKDKGIFQEVNGDELTIIPDGATIPYTFTLEDVPEDAFDKIQNGDIIELMRGKFSKKVYSVRKKAE
SIO_010081: SD1D_RS00435
subclass of: SO_0000673
so part of: SD1D_RS00435
location: 86189..86947
location: region:86189-86947:1
so has part: feature:86189-86947:1:exon

WP_058257105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86189-86947:1:exon

SD1D_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00440
old locus tag: SD1D_0090
so part of: sequence
location: 87216..87941
location: region:87216-87941:1
so has part: feature:87216-87941:1:exon
subclass of: SO_0000010

position:87216:1
position: 87216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87941:1
position: 87941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87216-87941:1:exon

SD1D_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00440
old locus tag: SD1D_0090
inference: COORDINATES: protein motif:HMM:NF017519.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YiiX/YebB-like N1pC/P60 family cysteine hydrolase
translation: MRIKKIIVSILAFSMVFGLENIKVYAISKPNISYSESITNTNKVFNPETVDRLWDELNDNLVIEPDKQSDFIRYSKSVMSVSSEPYGSYPTRKGVILVTADKWKGVVPLGHAAIVYSDQKVIEALQDGVVIGRNDWYKSKSTCFGVSVRSTTASQDAQAADYCYEQLNKEYNYNYYNMNTRKKFYCSHLVWAAYKDLFGIDLNTPEFDITLKVNDIPLATVTAIHPLELVNNDLTFVTYVK
SIO_010081: SD1D_RS00440
subclass of: SO_0000673
so part of: SD1D_RS00440
location: 87216..87941
location: region:87216-87941:1
so has part: feature:87216-87941:1:exon

WP_058257106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87216-87941:1:exon

SD1D_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00445
old locus tag: SD1D_0091
so part of: sequence
location: 87999..89069
location: region:87999-89069:1
so has part: feature:87999-89069:1:exon
subclass of: SO_0000010

position:87999:1
position: 87999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89069:1
position: 89069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87999-89069:1:exon

SD1D_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00445
old locus tag: SD1D_0091
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKKIIIIGGILILIISSIIIGFIVHKLNIDQKFPKEYEFAVIDTTSQLNKSFIYYYDDLGKKVYEKLYKMGYMGDTFSCPQVYNNKVYVTPWGTAKERELTVILEIDKENGNYKTYDTTLRSINSLAITDKYFFAVNNFNGVSKLARTNRETEETTIKEFPKHIILQINIFNNILYAFASLEDTSELIEIDLETMEEICRTDVTKYGECPPSGVLMEEGSLYFTLPFNYGEDSDNLLVYDTKTKEIKEIKLPDALPCQLLKYQQYIIISHINNITDEGNSLSILDIETGKIENYQLENTPSQIYIKDNFLYSLDITDRNICRYELVDNRIKFIDQIFIDKRDTDLHYFLTGLYFN
SIO_010081: SD1D_RS00445
subclass of: SO_0000673
so part of: SD1D_RS00445
location: 87999..89069
location: region:87999-89069:1
so has part: feature:87999-89069:1:exon

WP_058257107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87999-89069:1:exon

SD1D_RS12080
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12080
old locus tag: SD1D_0092
so part of: sequence
location: 89235..89906
location: region:89235-89906:1
so has part: feature:89235-89906:1:exon
subclass of: SO_0000010

position:89235:1
position: 89235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89906:1
position: 89906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89235-89906:1:exon

SD1D_RS12080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12080
old locus tag: SD1D_0092
inference: COORDINATES: protein motif:HMM:TIGR04398.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SLAP domain-containing protein
translation: MKKLLRVILVISMVLVLGMSTAATSYAEAASKKVKVKLNATKLTLYVGETFNLKVTGTKQKVKWSSSNKEVVTVNKKGKVSAKGKGKATITAKVGNKKYKCNVTVKEITSKTVFGNGCLLTSINTLQFSTKEIRKLSNGDYQVDAYIYNGLNYPVGDINVTSMTLYDRSGNQVASAAFGVCKNLVINQKSYAIWTFHFDKEYVNDGDFDLSKHSLHVYSNFIY
SIO_010081: SD1D_RS12080
subclass of: SO_0000673
so part of: SD1D_RS12080
location: 89235..89906
location: region:89235-89906:1
so has part: feature:89235-89906:1:exon

WP_058257108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89235-89906:1:exon

SD1D_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00455
old locus tag: SD1D_0093
so part of: sequence
location: 90243..92552
location: region:90243-92552:1
so has part: feature:90243-92552:1:exon
subclass of: SO_0000010

position:90243:1
position: 90243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92552:1
position: 92552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90243-92552:1:exon

SD1D_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00455
old locus tag: SD1D_0093
inference: COORDINATES: protein motif:HMM:TIGR02937.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MGKVVETYERNYKEEDQKLFRAIINLKEGDQDSFEQVYKLSEKYIYSIIYRIVRDNDKTADLMQETYIQIYNKLDTLDNVESFLVWAGRIATNKTLRYIQKYSKEVLLDEEETDFVFENVRDDKEEFLPEDILLNKEKKEKIYNIINNLSSEQKITIQYYYFHEMSVGEISKIMQCSPGTVKSRLNYARKQIKQAVIDTEKKEGIKLYSLSGLPLFWLLFREEAAACMVPEVISSSVIKGIGDTVGIKIVETVGNEIAKVGKKGLKELIHKFFDTTAGKIVSSVAVVSVAGTVAVSQIPKTLYTTTNTIIDVQKSSNEIQNPEDCHNQYLIDGKYIVLENDKDQRGVYTIKGKEILPSAFDKIEYNEYTGGLFRVSKDDMWAYYNKSGEIICDKMYDELGPVIDKMFWCYDEESDKYKVYSVDGYQVSDSSYDYIGEMANGLVVVKRDLKCGLLSIDGTLLFDIKYDDIFLGDGEYIVLNEELNDAYRRTVLDSSLNVVFTEDYDNKYMPLCFGSGFYNGVVELSGFQNLFTPIYVPTKVDGTWIFNPIDTDFLPYNFELYPNGYFSYYNDNLEKSVLFNTNGEEIAIADYSSFYYLDNKFILSDDRKYSLIDEKASVIISDYDMIWSHYKGKYYVCQEGNYYDLYKDDGTILYNDATYHIASIGSEMFKCESDSETIIVDGVSGKSFVLSPEESIISYFCDGYAIKYTCDDIIKIGEINYKYEIIDRKGKVVYTIDIPKEGGLDNPIVLKEGVYSYENEGKCYIKTWK
SIO_010081: SD1D_RS00455
subclass of: SO_0000673
so part of: SD1D_RS00455
location: 90243..92552
location: region:90243-92552:1
so has part: feature:90243-92552:1:exon

WP_058257109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90243-92552:1:exon

SD1D_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00460
old locus tag: SD1D_0094
so part of: sequence
location: 92609..93334
location: region:92609-93334:1
so has part: feature:92609-93334:1:exon
subclass of: SO_0000010

position:92609:1
position: 92609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93334:1
position: 93334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92609-93334:1:exon

SD1D_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00460
old locus tag: SD1D_0094
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF013980.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SprT family zinc-dependent metalloprotease
translation: MKYPSETREVQCRQGKVGYMLTRKPVKNINIRIKPDGRVLVSASNRVPIDYIDKLIKEKEEFIFRALKKYEAMKKQVSDIPRRYEEGEGFKILGKKLYLKVIEGNTSSVTSDNDFIYLTVKDKYNIRSKEILINKWLKEMQTNIFHQISKEVHKKFEKYGVKYPLIKIRKMKSRWGSCHSQRGIITLNSKLVEAPRTCIEYVVMHEFAHFIHPNHSKNFYDFLTALMPDWKERKKEIDKII
SIO_010081: SD1D_RS00460
subclass of: SO_0000673
so part of: SD1D_RS00460
location: 92609..93334
location: region:92609-93334:1
so has part: feature:92609-93334:1:exon

WP_058257110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92609-93334:1:exon

SD1D_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: ahpC
locus tag: SD1D_RS00465
old locus tag: SD1D_0095
so part of: sequence
location: 93776..94339
location: region:93776-94339:1
so has part: feature:93776-94339:1:exon
subclass of: SO_0000010

position:93776:1
position: 93776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94339:1
position: 94339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93776-94339:1:exon

SD1D_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: ahpC
locus tag: SD1D_RS00465
old locus tag: SD1D_0095
EC number: 1.11.1.26
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1
GO function: GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO process: GO:0006979 - response to oxidative stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkyl hydroperoxide reductase subunit C
translation: MSLVGTEVKPFKAHAYHNGKFIQVTEEDFKGKWSVVCFYPADFTFVCPTELEDLQNNYETLKSMGVEVYSVSTDTHFTHKAWHDTSETIGKITYIMIGDPSHTLSRNFDVLIEEEGQADRGTFIIDPDGIIQSVEINAGNIGRDADVLVSKIKAAQYVRNNPNEVCPAKWKEGSETLKPSLDLVGKI
SIO_010081: SD1D_RS00465
subclass of: SO_0000673
so part of: SD1D_RS00465
location: 93776..94339
location: region:93776-94339:1
so has part: feature:93776-94339:1:exon

WP_058257111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93776-94339:1:exon

SD1D_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: ahpF
locus tag: SD1D_RS00470
old locus tag: SD1D_0096
so part of: sequence
location: 94351..95880
location: region:94351-95880:1
so has part: feature:94351-95880:1:exon
subclass of: SO_0000010

position:94351:1
position: 94351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95880:1
position: 95880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94351-95880:1:exon

SD1D_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: ahpF
locus tag: SD1D_RS00470
old locus tag: SD1D_0096
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003513961.1
GO function: GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO process: GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkyl hydroperoxide reductase subunit F
translation: MILDTEIKNQLAEYLKLLEGDVLIKVSVGDDSVSKDIISLVEELALLSPKIKTEEAKLPRTPSFSINRTDKDMGITFAGLPLGHEFTSLVLALLQVSGRPPKVEEHVAKQVKKLKGEFHFETYISLSCHNCPEVVQALNIMSVLNPNVTHTMIDGAAFKDEVESKDIMAVPAIYLNGEFFGGGRMTLEEILAKLDVTPDASLFEDKEPFDVLVIGGGPAGASAAIYAARKGIRTGIVAQRFGGQVRDTMAIENFISVKQTEGPKLAAALEDHVREYDVDIMCPQRVKSIEKKDIFLIELENGAILKSKTVIIATGARWRNVNVPGEAEFKNKGVAYCPHCDGPLYKGKRVAVIGGGNSGIEAAIDLAGVVDHVTVMEFMPELKADLVLQERLYSLPNVTVLKNVQTKEITGDSKVNGITYVERDTGIEKHIDLEGVFVQIGLVPNTEWLEDFLERNPMGEIPVDKYNATKIPGLFAAGDCTDSPNKQIIISMGSGANAALGAFDYLIRN
SIO_010081: SD1D_RS00470
subclass of: SO_0000673
so part of: SD1D_RS00470
location: 94351..95880
location: region:94351-95880:1
so has part: feature:94351-95880:1:exon

WP_058257112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94351-95880:1:exon

SD1D_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00475
old locus tag: SD1D_0097
so part of: sequence
location: 96155..96523
location: region:96155-96523:1
so has part: feature:96155-96523:1:exon
subclass of: SO_0000010

position:96155:1
position: 96155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96523:1
position: 96523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96155-96523:1:exon

SD1D_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00475
old locus tag: SD1D_0097
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017414397.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MSRKQTLADRCDCEVIHEDIVNQVREKMPQEETLYELADFFKVFGDSTRIRILWALDEAEMCVCDIAALLNMTQSAISHQLRVLKQAKLVRNRKEGKVVYYSLDDEHVRLILDQGLTHIKEV
SIO_010081: SD1D_RS00475
subclass of: SO_0000673
so part of: SD1D_RS00475
location: 96155..96523
location: region:96155-96523:1
so has part: feature:96155-96523:1:exon

WP_058257113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96155-96523:1:exon

SD1D_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00480
old locus tag: SD1D_0098
so part of: sequence
location: 96667..96888
location: region:96667-96888:1
so has part: feature:96667-96888:1:exon
subclass of: SO_0000010

position:96667:1
position: 96667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96888:1
position: 96888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96667-96888:1:exon

SD1D_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00480
old locus tag: SD1D_0098
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016648519.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal-associated domain-containing protein
translation: MKKKFILEGLGCANCAAKMEVAINKIKGVEKATVNFMTQRLIIEGVDELMAEIIEEAEKIVKKIEPDTKMKKA
SIO_010081: SD1D_RS00480
subclass of: SO_0000673
so part of: SD1D_RS00480
location: 96667..96888
location: region:96667-96888:1
so has part: feature:96667-96888:1:exon

WP_058257114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96667-96888:1:exon

SD1D_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00485
old locus tag: SD1D_0099
so part of: sequence
location: 96901..98745
location: region:96901-98745:1
so has part: feature:96901-98745:1:exon
subclass of: SO_0000010

position:96901:1
position: 96901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98745:1
position: 98745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96901-98745:1:exon

SD1D_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00485
old locus tag: SD1D_0099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015261590.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MKKSLVRIISGAVLLVVAVIINMIYQGWPSLVLYLISYILVGGDIILKAIRNIIRGKVFDENFLMAIATIGAIIISEYTEGIAVMLLYQIGELFQGYAVDKSRRSIADLMDIRPDYANVKKQDELIKVDPDEVKLGDIIVIKAGERIPLDARVIEGRSLLDTSALTGESLPREVEVGDEILSGCININGLLTAEVIKEYEESTVSKILDLVENASSRKSKSEQFITRFARYYTPVVVILALMLGLIPPLFIKGEAFREWSYRALSFLVVSCPCALVISIPLTFFSGIGGASKKGILIKGSNYFEALANTEIIAFDKTGTLTKGVFDVQEIVPEGISKDELLELAAYAESFSNHPISESIKKAYGKEINQAEISNVEEIAGHGIEVEIRGKKVIAGNARLMKLKNIAYHDKELVGTVVHVALEGKYVGYILIADEIKKDTKEAIKEIRALDIKKTVMLTGDNEAVGKKVGKYLGLNQVFTELLPGDKLNKLEELLTEKSHKGRLAYVGDGINDAPVLARADVGIAMGGLGSDAAIEAADVIIMTDEPSKIPLAIRISKKIIGIANQNIIFAISVKILILILSALGITNLWVAIFGDVGVTILAILNSFRTMRFGK
SIO_010081: SD1D_RS00485
subclass of: SO_0000673
so part of: SD1D_RS00485
location: 96901..98745
location: region:96901-98745:1
so has part: feature:96901-98745:1:exon

WP_058257115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96901-98745:1:exon

SD1D_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00490
old locus tag: SD1D_0100
so part of: sequence
location: 98810..99406
location: region:98810-99406:1
so has part: feature:98810-99406:1:exon
subclass of: SO_0000010

position:98810:1
position: 98810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99406:1
position: 99406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98810-99406:1:exon

SD1D_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00490
old locus tag: SD1D_0100
inference: COORDINATES: protein motif:HMM:NF014038.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CYTH domain-containing protein
translation: MDLGSIKFNMIEKELKILLTEDQYKLIKERFNWSEDISQINFYYGGNSDSIKDNRATVRIRGLSSGMMLQVKMPVSVEGAVHVKKEFEKECNIVPYKIDGSTLCKLCSVNDFPDVYLLGHLYTERLVSYYEDNNIIFLDKSVYLGKTDYELEIEFNDTLNTQLLSILEGLGLTTNNKVKGKFGRFMERYKGINSILDN
SIO_010081: SD1D_RS00490
subclass of: SO_0000673
so part of: SD1D_RS00490
location: 98810..99406
location: region:98810-99406:1
so has part: feature:98810-99406:1:exon

WP_058257116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98810-99406:1:exon

SD1D_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00495
old locus tag: SD1D_0101
so part of: sequence
location: complement(99513..99863)
location: region:99513-99863:-1
so has part: feature:99513-99863:-1:exon
subclass of: SO_0000010

position:99513:-1
position: 99513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99863:-1
position: 99863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99513-99863:-1:exon

SD1D_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00495
old locus tag: SD1D_0101
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012199716.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYALFVVLNEIDYMEDILTGFVENKISGATILDSQGMGSAIANSNNKDIPLFSALSMLLGDAHPYSKTIFTVLENEDMVEKAVGVVQEVVADISGTGIGFMFTVPIAKVYPMKKED
SIO_010081: SD1D_RS00495
subclass of: SO_0000673
so part of: SD1D_RS00495
location: complement(99513..99863)
location: region:99513-99863:-1
so has part: feature:99513-99863:-1:exon

WP_058257117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99513-99863:-1:exon

SD1D_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00500
old locus tag: SD1D_0102
so part of: sequence
location: complement(99893..101128)
location: region:99893-101128:-1
so has part: feature:99893-101128:-1:exon
subclass of: SO_0000010

position:99893:-1
position: 99893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101128:-1
position: 101128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99893-101128:-1:exon

SD1D_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00500
old locus tag: SD1D_0102
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012199715.1
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation:proton antiporter
translation: MNLLLKVSIVLLVGVLGGKVARIFKLPNVSGYLIAGLFLGPSFFKFIGGQDVSNFSVISELALAIIAFSIGSEFVVKDMLRLGKSIVIITLAEVIGAVFIVFTVMYYIFNQPFAFSVVIASMSAATAPAATLLVIKQYNAYGPLTKTILPVVALDDVFGIIVFGIAMSLAHLTSGQESFSIFKMISEPAIEIGGSLLLGLALGIVLVLVAKKSSGRDELQAVALVAIGIATGLSNSLGLSPLLTNIMMGTILINMYPKSKRVFNSVNDFSTPVYILFFTLAGASLDLSILLQVGMLGIAYVIARASGKILGAWLGAKSVKANPTVTKNLGYALLPQGGISIGLLVLVRSQLPQFSAEISTIIMFSVLIYEVTGPIFAKLAIQKAGEINGSGKSDKLKNKPKVTASNSQLDG
SIO_010081: SD1D_RS00500
subclass of: SO_0000673
so part of: SD1D_RS00500
location: complement(99893..101128)
location: region:99893-101128:-1
so has part: feature:99893-101128:-1:exon

WP_058257118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99893-101128:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1679721
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00379
inference: COORDINATES: profile:INFERNAL:1.1.4
note: cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: cyclic di-AMP
so part of: sequence
location: complement(101264..101393)
location: region:101264-101393:-1
so has part: feature:101264-101393:-1:region

position:101264:-1
position: 101264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101393:-1
position: 101393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101264-101393:-1:region

SD1D_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00505
old locus tag: SD1D_0103
so part of: sequence
location: 101600..102700
location: region:101600-102700:1
so has part: feature:101600-102700:1:exon
subclass of: SO_0000010

position:101600:1
position: 101600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102700:1
position: 102700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101600-102700:1:exon

SD1D_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00505
old locus tag: SD1D_0103
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEGNLLSGGLDKLKEIRESLLKLRTCHEKYDKLVLEEDKIEKNIYSLEKELSEKVQATTKKRKVEIEEAYDKQLEKTRSRIKRIKEKRDRRKNKKVSERIGEETASLREENHRLKLEGKTLFKQKQVPSFCNTRLYYALYYPRYFVDYIIILASLLITLLVIPCGVYFYILPEEKSLYLIIIYIITVIIFGGLYLLLGNKTKDKYGDVIRQVQAKRHEIIKNNRKIKVIKRKVIKDRDESAYGLEDLDKELSKLNKEIADIAEQKKEALLTFENTTYQVIAAEISRQYDEKISSLKEDYNKISEEIRETDEIIKALTLKIASEYEPFIGKDLMTLDRLASLINIIEAGNASNISEAIQFHRNNMG
SIO_010081: SD1D_RS00505
subclass of: SO_0000673
so part of: SD1D_RS00505
location: 101600..102700
location: region:101600-102700:1
so has part: feature:101600-102700:1:exon

WP_058257119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101600-102700:1:exon

SD1D_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: yyaC
locus tag: SD1D_RS00510
old locus tag: SD1D_0104
so part of: sequence
location: complement(102701..103303)
location: region:102701-103303:-1
so has part: feature:102701-103303:-1:exon
subclass of: SO_0000010

position:102701:-1
position: 102701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103303:-1
position: 103303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102701-103303:-1:exon

SD1D_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: yyaC
locus tag: SD1D_RS00510
old locus tag: SD1D_0104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198083.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore protease YyaC
translation: MSIIYKGKNRIIYFNSSEQNTAYELGLALLALIKKQVLFNKNIIFLCIGSDRATGDCLGPIIGYKLSKYIRLPRFHIYGTLEEPVHAKNLKDTVAMIYEKHDDAFIIAIDASLGKSDHIGYITLGQGPLKPGAGVDKDLPEVGDLFITGIVNFSGLLDHMLLQTTRLNVVMSMADQICLAINYCLNRLKPHVLKDEISIN
SIO_010081: SD1D_RS00510
subclass of: SO_0000673
so part of: SD1D_RS00510
location: complement(102701..103303)
location: region:102701-103303:-1
so has part: feature:102701-103303:-1:exon

WP_058257120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102701-103303:-1:exon

SD1D_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00515
old locus tag: SD1D_0105
so part of: sequence
location: 103607..104962
location: region:103607-104962:1
so has part: feature:103607-104962:1:exon
subclass of: SO_0000010

position:103607:1
position: 103607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104962:1
position: 104962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103607-104962:1:exon

SD1D_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00515
old locus tag: SD1D_0105
inference: COORDINATES: protein motif:HMM:NF013630.2
GO function: GO:0097367 - carbohydrate derivative binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysM domain-containing protein
translation: MIESVYSNDNTEINGTGRVQANFKMPKNIRQIGKSNVSKKIYVEDYVMTFTKQLAGEDYSSCRVAVLLGHYVSLEQGRCIFISGAVEVEDIDIKDEIVFTNDHWTAIYENIKKYFVESEIVGWFLGGPGYILEDKERILKAHIDNFAGQDKTLLTYDNMEKEEAFYFYENGALCRQEGYYIYYEKNEKMQDYMIEHKQKPSEEAQYDDRVSREIRTIFENKKPQTDDENKSINRLMYAAGTLLAVIILVVGAAILSNYDQMKNMQDTLNSLSQNLKEVESVFLKNEDAQVSQDIVSQDIIEAKNEQPTSIPSDTEESLDIEVISGEVTPLPEKSEKEEIKEEEKEDKNQDKKDKKDSEDGSSSDKNDKKQAEAEKEQSQVEHQINQVEATGGQDLVSSEGEVKYYTVKAGDSLAGISYKLYNSANYISKIKELNNIEDEDMIYIGQKLIVP
SIO_010081: SD1D_RS00515
subclass of: SO_0000673
so part of: SD1D_RS00515
location: 103607..104962
location: region:103607-104962:1
so has part: feature:103607-104962:1:exon

WP_058257121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103607-104962:1:exon

SD1D_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00520
old locus tag: SD1D_0106
so part of: sequence
location: 105150..106295
location: region:105150-106295:1
so has part: feature:105150-106295:1:exon
subclass of: SO_0000010

position:105150:1
position: 105150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106295:1
position: 106295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105150-106295:1:exon

SD1D_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00520
old locus tag: SD1D_0106
inference: COORDINATES: protein motif:HMM:NF039834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5711 family protein
translation: MRDYESRRKRYRRNKTIVFTSLLILIVIIGAVYIYELINRDYQDYEVIKRLENTEENLGGYLEYNGAVVRYSKDGALAIDIKGNLLWNGSFEMSDPIADTCGDYVAIADRGSKQVSIFNKKGLAGSITTNHPIIKVQVANQGVVAILMIEDETSYIEIYSKEGELLGEKITNVVKDGYPMDFTLSHDGKKIGATYLCINKGEIINNLLFLNFGEVGKNFTDRTVGALIYNGKIVPRITFLDNDTVCAFTEEGFLIFTMEEKAEIYKEEIVEGEIKSVLHNEKYVGLVIEGKETKKSSLYLYDLKGNRVLNKELDFDYDTIYLSKDEIIMYDDLSCVIYKTNGQAKFRYTFTTNISALYPINHLDNYFLVNPKEILEIQLVE
SIO_010081: SD1D_RS00520
subclass of: SO_0000673
so part of: SD1D_RS00520
location: 105150..106295
location: region:105150-106295:1
so has part: feature:105150-106295:1:exon

WP_058257122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105150-106295:1:exon

SD1D_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00525
old locus tag: SD1D_0107
so part of: sequence
location: 106350..107018
location: region:106350-107018:1
so has part: feature:106350-107018:1:exon
subclass of: SO_0000010

position:106350:1
position: 106350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107018:1
position: 107018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106350-107018:1:exon

SD1D_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00525
old locus tag: SD1D_0107
inference: COORDINATES: protein motif:HMM:NF014704.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CvpA family protein
translation: MNWLLIVVLGIIIVNAFIGRKVGLIKIVFSLFSFIAALLLTSWVSPSINGMLKNNEAFYQKTYEKVETMLSLENKESDNQDEMIKQLPLPKSIRETLLENKAKQEANIKSYITTQVTGIVINAMAFILTFIIVFIGLWVVSIALNIISKLPVLNQINKTAGFFVGALQGLVIVWIIFLILTVISSSALGKSAFQQIEESAILSFIYNNNFFLNIVLNAVKII
SIO_010081: SD1D_RS00525
subclass of: SO_0000673
so part of: SD1D_RS00525
location: 106350..107018
location: region:106350-107018:1
so has part: feature:106350-107018:1:exon

WP_058257123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106350-107018:1:exon

SD1D_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00530
old locus tag: SD1D_0108
so part of: sequence
location: 107093..108055
location: region:107093-108055:1
so has part: feature:107093-108055:1:exon
subclass of: SO_0000010

position:107093:1
position: 107093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108055:1
position: 108055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107093-108055:1:exon

SD1D_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00530
old locus tag: SD1D_0108
EC number: 4.1.2.14
EC number: 4.1.3.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008976435.1
GO function: GO:0016832 - aldehyde-lyase activity [Evidence IEA]; GO:0016830 - carbon-carbon lyase activity [Evidence IEA]; GO:0016833 - oxo-acid-lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
translation: MNEVLSKIQMMGIVPVIKLDDPKDAVPLAKALCDGGLPCAEVTFRTAAAEESIRLMREAFPQMLIGAGTVLTTDQVDKAVNAGASFIVSPGLNPKVVSYCVERNIPITPGCSTPSDVEAAIELGLEVVKFFPAEAAGGLAMIKAMAAPYVNMKFMPTGGINASNLTSYLDFPKIIACGGSWMVKDDLVKAGDFDKITELTREAVKMMLGFELRHVGINASDESQADNIASSFEKLFGFEKKAGNSSIFAGKAIEVMKQPYLGEKGHIAIQTNYIERAIFHLQNQGFTFNEESKKYDKNGRLVAIYLNEEFGGFAVHLVQK
SIO_010081: SD1D_RS00530
subclass of: SO_0000673
so part of: SD1D_RS00530
location: 107093..108055
location: region:107093-108055:1
so has part: feature:107093-108055:1:exon

WP_058257124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107093-108055:1:exon

SD1D_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00535
old locus tag: SD1D_0109
so part of: sequence
location: 108514..110046
location: region:108514-110046:1
so has part: feature:108514-110046:1:exon
subclass of: SO_0000573

position:108514:1
position: 108514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110046:1
position: 110046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108514-110046:1:exon

SD1D_RS00535
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1679721
locus tag: SD1D_RS00535
old locus tag: SD1D_0109
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SD1D_RS00535
subclass of: SO_0000673
so part of: SD1D_RS00535
location: 108514..110046
location: region:108514-110046:1
so has part: feature:108514-110046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108514-110046:1:exon

SD1D_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rrf
locus tag: SD1D_RS00540
old locus tag: SD1D_0111
so part of: sequence
location: 110094..110211
location: region:110094-110211:1
so has part: feature:110094-110211:1:exon
subclass of: SO_0000573

position:110094:1
position: 110094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110211:1
position: 110211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110094-110211:1:exon

SD1D_RS00540
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1679721
gene: rrf
locus tag: SD1D_RS00540
old locus tag: SD1D_0111
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SD1D_RS00540
subclass of: SO_0000673
so part of: SD1D_RS00540
location: 110094..110211
location: region:110094-110211:1
so has part: feature:110094-110211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110094-110211:1:exon

SD1D_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00545
old locus tag: SD1D_0112
so part of: sequence
location: 110248..110321
location: region:110248-110321:1
so has part: feature:110248-110321:1:exon
subclass of: SO_0000663

position:110248:1
position: 110248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110321:1
position: 110321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110248-110321:1:exon

SD1D_RS00545
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00545
old locus tag: SD1D_0112
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:110282..110284,aa:Ile,seq:gat)
SIO_010081: SD1D_RS00545
subclass of: SO_0000673
so part of: SD1D_RS00545
location: 110248..110321
location: region:110248-110321:1
so has part: feature:110248-110321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110248-110321:1:exon

SD1D_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00550
old locus tag: SD1D_0113
so part of: sequence
location: 110444..110516
location: region:110444-110516:1
so has part: feature:110444-110516:1:exon
subclass of: SO_0000663

position:110444:1
position: 110444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110516:1
position: 110516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110444-110516:1:exon

SD1D_RS00550
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00550
old locus tag: SD1D_0113
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:110477..110479,aa:Ala,seq:tgc)
SIO_010081: SD1D_RS00550
subclass of: SO_0000673
so part of: SD1D_RS00550
location: 110444..110516
location: region:110444-110516:1
so has part: feature:110444-110516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110444-110516:1:exon

SD1D_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00555
old locus tag: SD1D_0114
so part of: sequence
location: 110961..113860
location: region:110961-113860:1
so has part: feature:110961-113860:1:exon
subclass of: SO_0000573

position:110961:1
position: 110961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113860:1
position: 113860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110961-113860:1:exon

SD1D_RS00555
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1679721
locus tag: SD1D_RS00555
old locus tag: SD1D_0114
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SD1D_RS00555
subclass of: SO_0000673
so part of: SD1D_RS00555
location: 110961..113860
location: region:110961-113860:1
so has part: feature:110961-113860:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110961-113860:1:exon

SD1D_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00560
old locus tag: SD1D_0115
so part of: sequence
location: 114003..114074
location: region:114003-114074:1
so has part: feature:114003-114074:1:exon
subclass of: SO_0000663

position:114003:1
position: 114003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114074:1
position: 114074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114003-114074:1:exon

SD1D_RS00560
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00560
old locus tag: SD1D_0115
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:114035..114037,aa:Asn,seq:gtt)
SIO_010081: SD1D_RS00560
subclass of: SO_0000673
so part of: SD1D_RS00560
location: 114003..114074
location: region:114003-114074:1
so has part: feature:114003-114074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114003-114074:1:exon

SD1D_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00565
old locus tag: SD1D_0116
so part of: sequence
location: 114109..114179
location: region:114109-114179:1
so has part: feature:114109-114179:1:exon
subclass of: SO_0000663

position:114109:1
position: 114109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114179:1
position: 114179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114109-114179:1:exon

SD1D_RS00565
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00565
old locus tag: SD1D_0116
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:114141..114143,aa:Cys,seq:gca)
SIO_010081: SD1D_RS00565
subclass of: SO_0000673
so part of: SD1D_RS00565
location: 114109..114179
location: region:114109-114179:1
so has part: feature:114109-114179:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114109-114179:1:exon

SD1D_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00570
old locus tag: SD1D_0117
so part of: sequence
location: 114384..115184
location: region:114384-115184:1
so has part: feature:114384-115184:1:exon
subclass of: SO_0000010

position:114384:1
position: 114384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115184:1
position: 115184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114384-115184:1:exon

SD1D_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00570
old locus tag: SD1D_0117
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009254700.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MNKIEILSCALDYIENNLHENITAEDVAHACYCSKSYLQKIFKYLNGHSVKEYIIKRRITKAARDLVTNPRVSILDIAYKYCYSSPEAFTRAFDQVWRCTPSVFRKKAKFTELYPRQLLPIKNGDDYMSSRKHVDITELYDLFVDRKDCYFVCCDIKSLNEINEISFKAGDLAILEVLKRIEKVAGKEDVIFRIGGDEFVLLTNSKDKDYATNIGDMILKMNGQTFTYADKVIPLSVYVAVTRFSGSGLKYNELFTSLHNTIKESK
SIO_010081: SD1D_RS00570
subclass of: SO_0000673
so part of: SD1D_RS00570
location: 114384..115184
location: region:114384-115184:1
so has part: feature:114384-115184:1:exon

WP_058257125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114384-115184:1:exon

SD1D_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00575
old locus tag: SD1D_0118
so part of: sequence
location: 115369..115439
location: region:115369-115439:1
so has part: feature:115369-115439:1:exon
subclass of: SO_0000663

position:115369:1
position: 115369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115439:1
position: 115439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115369-115439:1:exon

SD1D_RS00575
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00575
old locus tag: SD1D_0118
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:115401..115403,aa:Cys,seq:gca)
SIO_010081: SD1D_RS00575
subclass of: SO_0000673
so part of: SD1D_RS00575
location: 115369..115439
location: region:115369-115439:1
so has part: feature:115369-115439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115369-115439:1:exon

SD1D_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00580
old locus tag: SD1D_0119
so part of: sequence
location: 115945..116931
location: region:115945-116931:1
so has part: feature:115945-116931:1:exon
subclass of: SO_0000010

position:115945:1
position: 115945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116931:1
position: 116931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115945-116931:1:exon

SD1D_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00580
old locus tag: SD1D_0119
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198761.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron chelate uptake ABC transporter family permease subunit
translation: MNFKLRKILHNKLFWLIFLILSSIYSLTIGVKDFNLLGLFTQNSTDINLALISRLPRLISILVTGASLSISGLIMQTITDNKFVSPSTAGTMEWSRFGVMIAILFFGGEATIYKMIVAFICSLLGTLVFMQLLQTMKFKNAMIVPLVGMMLGNVISSITSFFAYRLDMIQNMSSWLQGNFSLVIKGRYELLYLGIPFLIIAYIYANKLTIAGMGESFSKSLGINYKAVVLLGMVIVAVITSTVVVTVGSISFIGIIIPNIVSIFVGDNLRNALPITALFGALFLLICDMIGRVIIFPYEISISLIVSVVGSIMFLILLFRRKKNWSTS
SIO_010081: SD1D_RS00580
subclass of: SO_0000673
so part of: SD1D_RS00580
location: 115945..116931
location: region:115945-116931:1
so has part: feature:115945-116931:1:exon

WP_058257126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115945-116931:1:exon

SD1D_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00585
old locus tag: SD1D_0120
so part of: sequence
location: 116916..117887
location: region:116916-117887:1
so has part: feature:116916-117887:1:exon
subclass of: SO_0000010

position:116916:1
position: 116916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117887:1
position: 117887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116916-117887:1:exon

SD1D_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00585
old locus tag: SD1D_0120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198762.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron chelate uptake ABC transporter family permease subunit
translation: MEYILKDKKSKKVIVLLLLLDLVLIAGFLLPGLTAKNFSFFMPRRMTKILAVIIVSYAIGYSSLTFQTITNNHILTPSVMGLDSLYLFIQTFIVFFAGSKALSQMIGYPHFLISVGFMISAACLLFLLLFRGESKNVYFLVLTGMIMGGLFNGMATFMQVLLDPNEFSVLQGRMFASFNNINSKLIGISIFIILVVFIISIKDLPYLDVVSLGAENAINLGVDYKKLVLKTLIISAVLISVSTALVGPITFLGILIVNLARHVLASYSHRSLTIGTTLLGIFFLTAGLLVTERIFRFETTMSVIINFIGGIYFLYLMLKERKQ
SIO_010081: SD1D_RS00585
subclass of: SO_0000673
so part of: SD1D_RS00585
location: 116916..117887
location: region:116916-117887:1
so has part: feature:116916-117887:1:exon

WP_058257127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116916-117887:1:exon

SD1D_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00590
old locus tag: SD1D_0121
so part of: sequence
location: 117884..118642
location: region:117884-118642:1
so has part: feature:117884-118642:1:exon
subclass of: SO_0000010

position:117884:1
position: 117884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118642:1
position: 118642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117884-118642:1:exon

SD1D_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00590
old locus tag: SD1D_0121
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198763.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MIAVRNITKRYGDKKVVDNVDLDIPKGKIIAFIGSNGAGKSTLISMISRTLKKDGGEVFIDNKELRQWKSIDLSKRLSILKQSNFLNIRLTVRELVSFGRFPYSKGRLSKEDLKHVNDALEYMGLMDLQDRYLDELSGGQRQMAYIAMVIAQDTEYIFLDEPLNNLDMKHSVKIMKVLKRLVNERGKTIMVVIHDINFVSCYADYVVAMKDGKIIKQGNTCQIIESGVLYDIYGMDISVQNYCGKNICLYYS
SIO_010081: SD1D_RS00590
subclass of: SO_0000673
so part of: SD1D_RS00590
location: 117884..118642
location: region:117884-118642:1
so has part: feature:117884-118642:1:exon

WP_058257128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117884-118642:1:exon

SD1D_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00595
old locus tag: SD1D_0122
so part of: sequence
location: 118680..119663
location: region:118680-119663:1
so has part: feature:118680-119663:1:exon
subclass of: SO_0000010

position:118680:1
position: 118680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119663:1
position: 119663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118680-119663:1:exon

SD1D_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00595
old locus tag: SD1D_0122
inference: COORDINATES: protein motif:HMM:NF013648.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: siderophore ABC transporter substrate-binding protein
translation: MKKFLYIILSVGLIMGLLGACSKKEVASNIDSSNTSQEASKDTNDSAAYASVTIEHIKGTVTVAADVKKAVVLDYGILDIIDALGIDVEIATAVSSLPAYLSKFENASSVGSLKEPDLEAIFEFEPDVIFISGRQQDYYDQLLEIAPTIYVETNGDTYLDDVKTNIGYVAQIFSKENEAEEAINKLNSLVEEVQAITAESNEKVLILLTNDGSVSVYGSGSRFGMIHDILGAKAADENIESSTHGQSVNFEYIADKNPDIILVIDRTLVVGGTNTANAVLDNDLVNGTNAAINNRIVSLNPDIWYLSGGGITSTSQMIIDVREAYKN
SIO_010081: SD1D_RS00595
subclass of: SO_0000673
so part of: SD1D_RS00595
location: 118680..119663
location: region:118680-119663:1
so has part: feature:118680-119663:1:exon

WP_058257129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118680-119663:1:exon

SD1D_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00600
old locus tag: SD1D_0123
so part of: sequence
location: complement(119992..121200)
location: region:119992-121200:-1
so has part: feature:119992-121200:-1:exon
subclass of: SO_0000010

position:119992:-1
position: 119992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121200:-1
position: 121200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119992-121200:-1:exon

SD1D_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00600
old locus tag: SD1D_0123
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004455260.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FprA family A-type flavoprotein
translation: MNTIYEISPKIYWVGGNDRRIELFENMFPLPNGVAYNSYLINDEKTALLDTVDAAISAEYLENITHALNGRQLDYLVINHMEPDHCANIEEILRRYPSVKVIGNPKTFQFFRQYYTMDMSDNYIEVKEGQEICLGSHTLRFYMAPMVHWPEVMVTYETSKGILFSADAFGAFGAISGNIFADELEYDSYFLDEARRYYTNIVGRYGNQVQALFKKLSGLEINMICGLHGHLWRGDMIPYIMDKYDKWSKYLPEKKGVVLAYGSMYGNTENAVNALAVKLAQRGIKDIRVYDVSKTHPSYIISDIFKYSHVVFAAPTYNMNLYFPMDSLIRELAVLNISNRKVSLIGNHTWASAALKNMTEMISNMKNMEIVGTPIDIKSSLREDREGELDNLADAIYESMDD
SIO_010081: SD1D_RS00600
subclass of: SO_0000673
so part of: SD1D_RS00600
location: complement(119992..121200)
location: region:119992-121200:-1
so has part: feature:119992-121200:-1:exon

WP_058257130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119992-121200:-1:exon

SD1D_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00605
old locus tag: SD1D_0124
so part of: sequence
location: complement(121298..122347)
location: region:121298-122347:-1
so has part: feature:121298-122347:-1:exon
subclass of: SO_0000010

position:121298:-1
position: 121298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122347:-1
position: 122347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121298-122347:-1:exon

SD1D_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00605
old locus tag: SD1D_0124
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006782153.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MSLQKLCQDISCNDPNILEEGSHIGSRIMCPEYSLHVKDIKTYPLSQEERIFALCWTIFPNNRLYGTIKPSLVSFSYGCTFKEGCRTQMHTHEYLELAYVVSGTFRQQILGNDIIFKQGELWLIDKNCLHQDYLDPEPACILFLGIANEMFDSIISSQVADERIISFLQTALMKQKDLWQYLHFKPKDKNNKQMEEYLTKLLNELIIYDKASNYICHGLLMRIFRLLSSDYDISLSSKMQKKMNWLLFQEITSYIKENYRDISLKQLSKNFHFHEDYFNRLLKAKTGMTYTEYIQNIRIKEAEKLLLNTKLTIDEIAVRVGYQNKGYFYRIFVDKHKMTPAQYRKEKLI
SIO_010081: SD1D_RS00605
subclass of: SO_0000673
so part of: SD1D_RS00605
location: complement(121298..122347)
location: region:121298-122347:-1
so has part: feature:121298-122347:-1:exon

WP_058257131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121298-122347:-1:exon

SD1D_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: araA
locus tag: SD1D_RS00610
old locus tag: SD1D_0125
so part of: sequence
location: 122540..124033
location: region:122540-124033:1
so has part: feature:122540-124033:1:exon
subclass of: SO_0000010

position:122540:1
position: 122540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124033:1
position: 124033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122540-124033:1:exon

SD1D_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: araA
locus tag: SD1D_RS00610
old locus tag: SD1D_0125
EC number: 5.3.1.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006782152.1
GO function: GO:0008733 - L-arabinose isomerase activity [Evidence IEA]
GO process: GO:0005996 - monosaccharide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-arabinose isomerase
translation: MIKKDYVFWFATGSQDLYGDECLANVAEHSKIMVEKMNESGLLPFKLQWKPTLLDSVSIRKLFNEANEDQECAGVITWMHTFSPAKSWILGLQEYRKPLLHLHTQFNQEIPYDTIDMDFMNENQSAHGDREFGHIVSRMGIERKVVVGHWSNENVLKRIASWMRTAIGVIESSHIRVLRIADNMRNVAVTEGDKVEAQIKFGWEVDTYPINEIAEYVSAVPSPEVDVLVEEYYSKYDILLEGRDEKEFRRHVAVQAAIELGFEKFLKEKNYHAIVTHFGDLGSLQQLPGLAIQRLMEKGYGFGGEGDWKTAAMVRLMKVMTADIKDAKGTSFMEDYTYNLVPGKEGILQAHMLEVCPSVSDGPIGIKVCPLSMGDREDPARLVFTSKTGPAIATSLVDLGNRFRLIINEVECKKTEKPMPKLPVATAFWTPMPNLEVGAEAWILSGGAHHTAFTYDLSAEQMGDWAAAMGIEAVYIDKDTNIRTLKNELLWNSIAFR
SIO_010081: SD1D_RS00610
subclass of: SO_0000673
so part of: SD1D_RS00610
location: 122540..124033
location: region:122540-124033:1
so has part: feature:122540-124033:1:exon

WP_058257132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122540-124033:1:exon

SD1D_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00615
old locus tag: SD1D_0126
so part of: sequence
location: 124073..125674
location: region:124073-125674:1
so has part: feature:124073-125674:1:exon
subclass of: SO_0000010

position:124073:1
position: 124073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125674:1
position: 125674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124073-125674:1:exon

SD1D_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00615
old locus tag: SD1D_0126
EC number: 2.7.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017210075.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
GO process: GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FGGY-family carbohydrate kinase
translation: MNKNLRIEAINSGRTTLGIELGSTRIKAVLMDENYMPLAIGKHDWENRYIDNIWTYTLEDIWEGVQGSYRDLADEVEKQYGVTISNIGAIGISAMMHGYMAFNKAGELLVPFRTWRNTITGPASDKLTELFNFNIPQRWSIAHLYQAILNKEEHVAEIDYLITLEGYVHWKLTGEKVLGIGDAAGMFPVDVKTKDFNETMINQFDRLIADKGFPWKLRDILPKVLVAGEYAGKLTEEGAKLLDPRGNLKPGIPLCPPEGDAGTGMVATNSVAKRSSNVSAGTSVFAMVVLEEDLKKVHKEIDIVMTPAGDPVAMVHSNNCTSDLNAWVSLFGEFAKAMNIEVDTTKLYSVLYNKALSGDADCGGLLSYGYYSGEHITHFEEGRPLFVRKPDAKFNLANFMRVHLYTALGALKTGLDILFKEEKVVVDKVLGHGGFFKTEGVGQRILAAAMNTPVTVMETAGEGGAWGIAILADYMLHKKEEDTLDSYLESRVFADMKGLSIEPDKKDVEGFEQFMSLYTAGLAIERSAVETLI
SIO_010081: SD1D_RS00615
subclass of: SO_0000673
so part of: SD1D_RS00615
location: 124073..125674
location: region:124073-125674:1
so has part: feature:124073-125674:1:exon

WP_242955227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124073-125674:1:exon

SD1D_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00620
old locus tag: SD1D_0127
so part of: sequence
location: 125722..126411
location: region:125722-126411:1
so has part: feature:125722-126411:1:exon
subclass of: SO_0000010

position:125722:1
position: 125722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126411:1
position: 126411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125722-126411:1:exon

SD1D_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00620
old locus tag: SD1D_0127
EC number: 5.1.3.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006774212.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-ribulose-5-phosphate 4-epimerase
translation: MLEQLKKEVYEANMELPKRGLVTYTWGNVSGIDREQGLFVIKPSGVSYDDLKPEDMVVVDLKGNKVEGNFNPSSDTATHLELYLAFPEIGGVVHTHSPVATAWAQAGRSIPCYGTTHADYFKGDIPCTRSLTEEEVNNGYEKNTGLVIVETFSGLNPLYVPGVLCKNHGPFTWGKNAAEAVYNAVVLEEVAKMNLMTEQLNNKMSPAPKYIQDKHFLRKHGPNAYYGQS
SIO_010081: SD1D_RS00620
subclass of: SO_0000673
so part of: SD1D_RS00620
location: 125722..126411
location: region:125722-126411:1
so has part: feature:125722-126411:1:exon

WP_058257134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125722-126411:1:exon

SD1D_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00625
old locus tag: SD1D_0128
so part of: sequence
location: 126533..127069
location: region:126533-127069:1
so has part: feature:126533-127069:1:exon
subclass of: SO_0000010

position:126533:1
position: 126533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127069:1
position: 127069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126533-127069:1:exon

SD1D_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00625
old locus tag: SD1D_0128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015567357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic diphosphatase
translation: MNIWHDISPDRITPKEFVAVVEISKGSKKKYELDKETGLIILDRILYTSTHYPANYGFIPRTYGDDLDPLDVLVLCSESIEPLTLVKCYPIGVMNMIDNGMRDEKIIAIPCNDPNFNMYKNINELPAHLFSEMRHFFSVYKELENKETAVNEFGGPEEAMDIISYCIKNYNNVFQNKK
SIO_010081: SD1D_RS00625
subclass of: SO_0000673
so part of: SD1D_RS00625
location: 126533..127069
location: region:126533-127069:1
so has part: feature:126533-127069:1:exon

WP_058259147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126533-127069:1:exon

SD1D_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00630
old locus tag: SD1D_0129
so part of: sequence
location: 127307..127828
location: region:127307-127828:1
so has part: feature:127307-127828:1:exon
subclass of: SO_0000010

position:127307:1
position: 127307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127828:1
position: 127828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127307-127828:1:exon

SD1D_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00630
old locus tag: SD1D_0129
inference: COORDINATES: protein motif:HMM:NF041635.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: STM3941 family protein
translation: MGDIIIEETNHRAFAMTMASFFMLAASTAICIYGFMKENKFYKIVGLLVAIIFLIGFLAAIIQATKTKILFIITMDGIIDCPSIGGYGFISYKDIKEFEIIHLHGLETIAVILKNRDEFISKLPQNKKRLAKRNLSLNQPAIILHTDLAKDMVPEDILSLLQKRLKDYKRLYE
SIO_010081: SD1D_RS00630
subclass of: SO_0000673
so part of: SD1D_RS00630
location: 127307..127828
location: region:127307-127828:1
so has part: feature:127307-127828:1:exon

WP_058257135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127307-127828:1:exon

SD1D_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsF
locus tag: SD1D_RS00635
old locus tag: SD1D_0130
so part of: sequence
location: 127991..128278
location: region:127991-128278:1
so has part: feature:127991-128278:1:exon
subclass of: SO_0000010

position:127991:1
position: 127991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128278:1
position: 128278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127991-128278:1:exon

SD1D_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsF
locus tag: SD1D_RS00635
old locus tag: SD1D_0130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002585697.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S6
translation: MNQYELALVVNAKIEDEEKVATLEEVKDLISRFGGTVTNVDDWGKKKLAYEIQKMKEGYYYFIQFEADSTVPNEIEQRIRIMEKVIRYLCIKKDA
SIO_010081: SD1D_RS00635
subclass of: SO_0000673
so part of: SD1D_RS00635
location: 127991..128278
location: region:127991-128278:1
so has part: feature:127991-128278:1:exon

WP_058257136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127991-128278:1:exon

SD1D_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00640
old locus tag: SD1D_0131
so part of: sequence
location: 128320..128766
location: region:128320-128766:1
so has part: feature:128320-128766:1:exon
subclass of: SO_0000010

position:128320:1
position: 128320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128766:1
position: 128766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128320-128766:1:exon

SD1D_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00640
old locus tag: SD1D_0131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005340597.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MNKVILIGRLTRDPMVRYSQGENQMAVARFTLAVDRRFKRANDTQDADFIGCVCFGKQAEFVEKYFRQGMKMGAVGRIQTGSYTNNEGQKIYTTDVVVEEIEFVESKANNPDASANNYQRDFRPEPSSAMGDGFMNIPDGIDEELPFN
SIO_010081: SD1D_RS00640
subclass of: SO_0000673
so part of: SD1D_RS00640
location: 128320..128766
location: region:128320-128766:1
so has part: feature:128320-128766:1:exon

WP_058257137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128320-128766:1:exon

SD1D_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsR
locus tag: SD1D_RS00645
old locus tag: SD1D_0132
so part of: sequence
location: 128801..129067
location: region:128801-129067:1
so has part: feature:128801-129067:1:exon
subclass of: SO_0000010

position:128801:1
position: 128801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129067:1
position: 129067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128801-129067:1:exon

SD1D_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsR
locus tag: SD1D_RS00645
old locus tag: SD1D_0132
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007706127.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S18
translation: MANKNDKSDSQAKRRTFSRRRRKVCVFCADKNHTGIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAVKRARHIALMPYTVE
SIO_010081: SD1D_RS00645
subclass of: SO_0000673
so part of: SD1D_RS00645
location: 128801..129067
location: region:128801-129067:1
so has part: feature:128801-129067:1:exon

WP_058257138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128801-129067:1:exon

SD1D_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00650
old locus tag: SD1D_0133
so part of: sequence
location: 129224..129724
location: region:129224-129724:1
so has part: feature:129224-129724:1:exon
subclass of: SO_0000010

position:129224:1
position: 129224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129724:1
position: 129724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129224-129724:1:exon

SD1D_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00650
old locus tag: SD1D_0133
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNRSFQEYRRKKFDFKIIWAIIGSAVLFAMIGIVVRGVWYKRQCDIIYNEVNSSVVKCGMKIHGQYGGEKVLISEANINPIIKSITDSMVVFASADDIPNEDPVILEFGDLLLMEIYPAEGYEVFVKHVRKNKAKYYYIKNTCNFNNLKKMVSLDQWSNPNIGID
SIO_010081: SD1D_RS00650
subclass of: SO_0000673
so part of: SD1D_RS00650
location: 129224..129724
location: region:129224-129724:1
so has part: feature:129224-129724:1:exon

WP_058257139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129224-129724:1:exon

SD1D_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00655
old locus tag: SD1D_0134
so part of: sequence
location: 129792..130517
location: region:129792-130517:1
so has part: feature:129792-130517:1:exon
subclass of: SO_0000010

position:129792:1
position: 129792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130517:1
position: 130517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129792-130517:1:exon

SD1D_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00655
old locus tag: SD1D_0134
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000062149.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MKVKEVADLIGISVRTLHYYDEIGLLSPDKTTEAGYRIYSEKNLETLQQILFFKELGFSLKKIKEILDSPTFERQEALKLQHKMLLEKRSRLDKMIQTIEKTIKHGKGEIQMSIKDKFEGFDFSKNPYEEEARKRWGDKAVDEANEKAKNMTLTDQERFNEIFCKLASLRHLSPASKEAQEGIKEWNQLLNKMGNYSPEAFKGLGQMYVDDERFTRNIDKFGDGLALFMRDAMEIYADTQK
SIO_010081: SD1D_RS00655
subclass of: SO_0000673
so part of: SD1D_RS00655
location: 129792..130517
location: region:129792-130517:1
so has part: feature:129792-130517:1:exon

WP_058257140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129792-130517:1:exon

SD1D_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00660
old locus tag: SD1D_0135
so part of: sequence
location: complement(130631..131167)
location: region:130631-131167:-1
so has part: feature:130631-131167:-1:exon
subclass of: SO_0000010

position:130631:-1
position: 130631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131167:-1
position: 131167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130631-131167:-1:exon

SD1D_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00660
old locus tag: SD1D_0135
inference: COORDINATES: protein motif:HMM:NF039198.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5698 domain-containing protein
translation: MGFLMNLSGPILYLIIFAAKTIEVSIATVRLVLVNKGERVKGAVLGFIEILIWISLVSSVLNNITDDPFKIIAYAAGFSLGNYLGVSIESKVAIGLASLYVVVDSEAGNVLANLLRDHDYGVTIIDGKGKDDSIKSLLFIQLKRKKIPATIKLIKEHYPNAYISVNDVKSTVGGFIKK
SIO_010081: SD1D_RS00660
subclass of: SO_0000673
so part of: SD1D_RS00660
location: complement(130631..131167)
location: region:130631-131167:-1
so has part: feature:130631-131167:-1:exon

WP_058257141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130631-131167:-1:exon

SD1D_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00665
old locus tag: SD1D_0136
so part of: sequence
location: complement(131246..132994)
location: region:131246-132994:-1
so has part: feature:131246-132994:-1:exon
subclass of: SO_0000010

position:131246:-1
position: 131246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132994:-1
position: 132994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131246-132994:-1:exon

SD1D_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00665
old locus tag: SD1D_0136
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIVSRQEMQRLLKIEREYKNALIYIEEISKNYNDTSNQLKSKQEELLNLYSQITYYKNEIAKYNEITVEVEEYVREREDEISRLNSKASHYEVKLNNLIKENEDLTNLIKEYKQEVQHLELSLMNRDTEIDSYKVGLKEREEKINYMAELLKESEVIVTNKDNEINILKEKINTLEKANKEKESDLHSKTDLISSLENDLEKTSQALKQNKKELEDTVTDLNSTIEALEKSNNENKQLQKQLAEKEQLLKVANNNLLHKENIVKNLNKELSEKANSYNQLKKILDKKEEQIKGLTNSLKNNESTIQNLQNNLAEQDNISKELEMKIKEKDNLIKEFHEDIKEKDLHIEKLGSDLTKQGYKFEEVYNNLATAKETIETLEKQLDEEKTKNAAVESKLDHMNILVKNQKDEIENMSSLLSDRKSQIYQLEQKLAKLNKEQKLYSNRIKELELSLSQYSSMEEEINEKNEFIETLKNTISNKTNELWEQENIIVQLQDNIVTLSLKLDDSTNKINELQANNDSLITTIDKKEEIIRTIEARSESDTKEINQLKNQLKEKHAILDEYETKLLELMIELDELRHNKN
SIO_010081: SD1D_RS00665
subclass of: SO_0000673
so part of: SD1D_RS00665
location: complement(131246..132994)
location: region:131246-132994:-1
so has part: feature:131246-132994:-1:exon

WP_058257142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131246-132994:-1:exon

SD1D_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00670
old locus tag: SD1D_0137
so part of: sequence
location: complement(133280..136120)
location: region:133280-136120:-1
so has part: feature:133280-136120:-1:exon
subclass of: SO_0000010

position:133280:-1
position: 133280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136120:-1
position: 136120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133280-136120:-1:exon

SD1D_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00670
old locus tag: SD1D_0137
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010966737.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0071704 - organic substance metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulase family glycosylhydrolase
translation: MKMKKKSILSLLLLLVMVCTYAAVPNRSMAYANSKEQAVQSEPSNEEVVLFEGSATSSDWGQAVTLYSGSDFSKGDLTPQAQIAVTYEGLKAPVLSLQSWTHNDIWQNVFPSYTSDGVAYFSVPDMISAYEMAYGEGYSSHFQDLDAIYVSDAGADLVVTKVTITRKTIESNYYNQGDITKVTIKAFAQNTTNDWTWMSMDNMVNLVYQTNTVLNATNTSNVFSKVNSSANFGLQVSDDKLIAGEGSRLKFHIGTVIVKAEGYDDLVIDLNKEYNESYLAETVSWGLTGNNTMIILNNYLPTDEAEKTDYIHNITEVICDITLTDYEFIPAEVEGPEFPDDYTYPTTMRDISAMELVKELKVGWNLGNSLEANGGETNWGNPVTKRKMIDAIKSAGFSTLRIPVRWDEHYIDDNYTIDPEYLKRVETVVNYALINDMYAIINIHHNQLQTQANEKSKEKVLAELEAVWTQIANYFKDYGDKLIFEVLNEPRNGDDWVGNTSLYEIVNEYNAKALSAIRKTGGNNEKRLVMLPTYAASADYSKIIAMKVPDDEHVAVSLHAYTPYDFALNTAAGSQTTFGENDKKILDKLFKLIYETFVEKGIPVVLGEFAATNKDNLEDRVEYAYYYAQAAAHYEIPICWWDNGVFDTIGESLGIFNRRTLTFVYPEILQALMEGWSSEKEITDLDPDVLFSGTGTSSNWGQAVALQLGLDFVFEDFIEGLIIAAEYQSENPPELILQGQTEGVYWVKINPNKIETKDTTNIAYFTLSDMVEAYKNALADYDSYDTIFPTLASIYIGDTGVDLTVTKVYKTYINNFTLPSVELSTNNYYNTVSQTYTISSEQGDIDLSKLKIVYSAKGMSTAKHNVWCCYADLIEDNPFRYSQITDSINCHIDNAKLTITFDDSIICPENTGKVTLIIQFAKSDWSYYDTLSDPSLEIYYNGTLVK
SIO_010081: SD1D_RS00670
subclass of: SO_0000673
so part of: SD1D_RS00670
location: complement(133280..136120)
location: region:133280-136120:-1
so has part: feature:133280-136120:-1:exon

WP_058257143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133280-136120:-1:exon

SD1D_RS12240
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12240
old locus tag: SD1D_0138
so part of: sequence
location: 136409..137329
location: region:136409-137329:1
so has part: feature:136409-137329:1:exon
subclass of: SO_0000010

position:136409:1
position: 136409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137329:1
position: 137329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136409-137329:1:exon

SD1D_RS12240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12240
old locus tag: SD1D_0138
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010246679.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MKYISIKEASERWKISDSRIRLLCREGRIEGAVKVGRNWLIPSHATKPIDAREFINKKYFGLEYDFTYIDSLKDRIDNYRPFSKELADSLHEKLIVEWTYNSNAIEGNTLTMSETKVVLEGITVGGKSLVEHLEIINHRDAILFVEDLISKKETLSEWNIRNIHSLVLKEIDNKNAGKYRDVNVVISGAKHIPPKHYEVSYLMQKLIEEYKNYWRDYHPVVRATLLHGEFVKIHPFIDGNGRTARLLLNFELMKNGYTPIIIKNKDRAKYYDVLDIAHTTMDYEAFIKFISDLVIESEKLWLSVLE
SIO_010081: SD1D_RS12240
subclass of: SO_0000673
so part of: SD1D_RS12240
location: 136409..137329
location: region:136409-137329:1
so has part: feature:136409-137329:1:exon

WP_173803190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136409-137329:1:exon

SD1D_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00685
old locus tag: SD1D_0139
so part of: sequence
location: complement(137401..139290)
location: region:137401-139290:-1
so has part: feature:137401-139290:-1:exon
subclass of: SO_0000010

position:137401:-1
position: 137401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139290:-1
position: 139290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137401-139290:-1:exon

SD1D_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00685
old locus tag: SD1D_0139
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010249057.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0071704 - organic substance metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulase family glycosylhydrolase
translation: MKKQILSFLLITMLLAIFVLKPPVSNKTAVADSIRDYTITADPNDDWLHVEGTNIVDKYGNKVWLTGANWFGFNCRERMFLDSYSCDIIACIETVADKGINVVRVPIATDLLYAWSKGEYPPSTDTSYNNPNLAGLNSFELFNLMLENFKRVGIKVILDVHSAETDNMGHNAPLWVKGEITEEIFKAAWVWVADYYKNDDTIIGFDLKNEPHTNTGDLKIKSQSAIWDDSNLPNNWKRVAEETALMILDVHPNALIFVEGVEIYPKDGIWDDETINMSPWLGNNDYYGNWWGGNLRGVKDYPIDLGKHQKQLVYSPHDYGPIVFEQEWFKGEFITADDKRAKEILYEKCWRDNWAYIMEEGIGPLFLGEWGGLTEGNHVLLDLNKKYLRSIRDYILENKYQLHHTFWCINNDSADTGGLLTRDEGTPFPGSRDYKWNDNKYDNYLYPTLWKTEDGKFIGLDHKVPLGRNGVSLNEYYNSPSTPTPSPFVTPSPTPSLTPSPTPSATPSPTPSVTPRPTPSLTPTPTPTATPSPTPLKLKTEVNAWNSGYTMTIYITNTSSVDIKDWTLVLSDADFTIESIWNASLTQEGNRLIITPLNWNSSIAAGDTISFGFQGSGSVNSDFEYYIVN
SIO_010081: SD1D_RS00685
subclass of: SO_0000673
so part of: SD1D_RS00685
location: complement(137401..139290)
location: region:137401-139290:-1
so has part: feature:137401-139290:-1:exon

WP_242955228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137401-139290:-1:exon

SD1D_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00690
old locus tag: SD1D_0140
so part of: sequence
location: complement(139511..140968)
location: region:139511-140968:-1
so has part: feature:139511-140968:-1:exon
subclass of: SO_0000010

position:139511:-1
position: 139511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140968:-1
position: 140968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139511-140968:-1:exon

SD1D_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00690
old locus tag: SD1D_0140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003516837.1
GO function: GO:0030246 - carbohydrate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate-binding protein
translation: MGRKITPILLILAVVFGLPKDVMAAENLPTTPPSGYDRVQNGVPQGKVSYITYQSKATNSQRRARIYLPPGYSTNQKYSVMYLLHGIGGNEDEWYNGGSPHVILDNLLAAGKIDPFILVLPNGNASGGGAQDGWENFTNDLIHSLIPYIESNYSVKTDSKHRALAGLSMGGGQTFNIGLTNLDLFPYIGAFSAAPNTYPTSRLFPDNGAAAKSKLKLLFISCGTNDNLISFGAGVHNFCESRGIPHHYWLIQGAGHDWNVWKQSFWNFAQMACAAGFTDNESQDPPKPISAFEKIEAENYSSQSGVETETCQDTGGGMNVGFIENGDYLVYKNVDFGTGAASFKARVASETNGGKIEIRLGSPTGTLLGTCSVPGTGGWQIWTDVQCSINNVSGTHDLYLVFTGGSDYLFNINYFSFSKESQILLGDLNGDGAIDGLDYALMKMYLLGSIDKFPVDNDIKSGDLNNDNVVDALDFSLLRQYLLNL
SIO_010081: SD1D_RS00690
subclass of: SO_0000673
so part of: SD1D_RS00690
location: complement(139511..140968)
location: region:139511-140968:-1
so has part: feature:139511-140968:-1:exon

WP_242955262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139511-140968:-1:exon

SD1D_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00695
old locus tag: SD1D_0141
so part of: sequence
location: complement(141481..143535)
location: region:141481-143535:-1
so has part: feature:141481-143535:-1:exon
subclass of: SO_0000010

position:141481:-1
position: 141481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143535:-1
position: 143535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141481-143535:-1:exon

SD1D_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00695
old locus tag: SD1D_0141
inference: COORDINATES: protein motif:HMM:NF014763.2
GO process: GO:0006935 - chemotaxis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MKSIRQKIALYASLLVILPILLTIIVNVFIIARNYEKELEENNMIFVDSIANHISDFVSEAYSLTEQVALNINSDPKNQEKTLMNLYNKHTYFELLYIQDSKGMQTAKTSGQLRNISNRWWFVKAKDEQAPFVSKSYYSIATNMPVSTIAIPIYDDNEQFAGVMAADIKLDELQKHIQKYSDDSKYAFIVDGEGVVIAHPKTEQLSELYNYKTMKKTVLKLDEEQNEVTEELDIKVPEALKNIVEKALKGENGFDTYTDINGDKVISAYQTITLPGSSDNWAIITVQNKTEAMDLVYGMQKINGLMGLISIIISFIIIFFATGKISDPIKKSANYLAIIAQGDFTIDVDKTLMSKKDELGIIARGIQTMKDSLKYLTRQITEEAFQIQEKLDHIVIEMNDLTSNLEGVAATTEELSANSQETAAATEEMTSTSSEIERAAHTVTENSEKGAIAAQKISQRAETIKEKVELSMQKTKALLLESKEELEKAIEEAKVVEQINVLSASIMDIAQQTNLLALNASIEAARAGEAGKGFAVVAREINHLADQSKAAVGKITEITASVNNAVANLSDNANNLLTFVSNDVANDYKHMQNVGNKYSDDAKFIEDLIIEFSATSEELLASIENMTNTIEGVSIAANESAIGTSEIATRVSEANLEADNIMEKVKETKNSSDKLKEASSIFKF
SIO_010081: SD1D_RS00695
subclass of: SO_0000673
so part of: SD1D_RS00695
location: complement(141481..143535)
location: region:141481-143535:-1
so has part: feature:141481-143535:-1:exon

WP_058257145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141481-143535:-1:exon

SD1D_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: surE
locus tag: SD1D_RS00700
old locus tag: SD1D_0142
so part of: sequence
location: 143775..144494
location: region:143775-144494:1
so has part: feature:143775-144494:1:exon
subclass of: SO_0000010

position:143775:1
position: 143775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144494:1
position: 144494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143775-144494:1:exon

SD1D_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: surE
locus tag: SD1D_RS00700
old locus tag: SD1D_0142
EC number: 3.1.3.5
EC number: 3.1.3.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009256091.1
GO function: GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO process: GO:0006950 - response to stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'/3'-nucleotidase SurE
translation: MRILVVNDDGVFTSGISHLAKMAAKLGEVWVVAPDQQCSAMSHRITVHGTLDIKQVDISVPGVHAYGVSGTPADCVKVGIKYLMPEKPDIVFSGINFGYNVGLDILYSGTVGAAMEALIHGVPAMAFSKEMNDNYEVVEANLLSITKELLNRPIKSNEIWNINFPSCTMSEFRGVLYDRIPAKEQFYLDKYVRMELENSNFRLTIDGVRNTAAEEGTDMRAVLDNYISVGKVANNILRS
SIO_010081: SD1D_RS00700
subclass of: SO_0000673
so part of: SD1D_RS00700
location: 143775..144494
location: region:143775-144494:1
so has part: feature:143775-144494:1:exon

WP_058257146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143775-144494:1:exon

SD1D_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00705
old locus tag: SD1D_0143
so part of: sequence
location: 144669..145547
location: region:144669-145547:1
so has part: feature:144669-145547:1:exon
subclass of: SO_0000010

position:144669:1
position: 144669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145547:1
position: 145547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144669-145547:1:exon

SD1D_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00705
old locus tag: SD1D_0143
inference: COORDINATES: protein motif:HMM:NF025608.2
GO function: GO:0009976 - tocopherol cyclase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tocopherol cyclase family protein
translation: MSYFHGINKKKGYFEGWYFRNQNDTEVISLIPAFHIDEKGKKSASIQVITNTVSDYIMYPIEDFAVSRKKLGIRIGNNIFTKEGIIVNFTTKKIEVKGALKFSKFTPLKYDIMGPFKYMPFMQCRHSVFSLSHKVTGKLRINGGVMYFNQGLGYVEGDRGIEFPRSYFWTQCSWGDQANNAIMISIADIPIANVTFKGCIAVIYYGGKEYRLATYLGVKIMKYNKNELWVQQGGYDLYVTLIDKNPHKLLAPVKGSMMRTVYESIDCKIRYRFMVNKKLIFDFIGRGSFERG
SIO_010081: SD1D_RS00705
subclass of: SO_0000673
so part of: SD1D_RS00705
location: 144669..145547
location: region:144669-145547:1
so has part: feature:144669-145547:1:exon

WP_058257147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144669-145547:1:exon

SD1D_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00710
old locus tag: SD1D_0144
so part of: sequence
location: 145704..147233
location: region:145704-147233:1
so has part: feature:145704-147233:1:exon
subclass of: SO_0000010

position:145704:1
position: 145704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147233:1
position: 147233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145704-147233:1:exon

SD1D_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00710
old locus tag: SD1D_0144
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003508108.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methylase
translation: MSSKNRTYVAIDLKSFYASVECIERGLDPLTTNLVVADASRTEKTICLAVSPSLKAYGIPGRPRLFEVVQKVRKANAKRLLNAPNRKFTGTSYSAIELKEKPELAIDYIAAVPRMAYYMEYSTRIYNIYLKYIAPEDIHVYSIDEVFLDVTAYLNTYQMSAKELTMKIIQDVRKNTGITATAGIGTNLYLCKIAMDIVAKHIPEDENGVRIAELDERSYRQKLWTHRPLTDFWRIGKGYAKKLEEHGMYTMGDIARCSIGKANDYHNEDLLYKLFGVNAELLIDHAWGFEPCTIEHIKAYKPASNSISSGQVLQSPYDFDKAKLIVREMTDLLVLDLVDKGLVTDQMVLTIGYDIENLTNPERAKLYKGEITIDRYGRRIPKQAHGTVNLDRQTSSTRLIIDAVMDLYDRIVDKNLLVRRITIGANRLVDEKNIEKEESFEQLELFADYCALEKERQQEEELLARERKMQKAILSIKKRYGKNAILKGMNLEEGAMARKRNEQIGGHKA
SIO_010081: SD1D_RS00710
subclass of: SO_0000673
so part of: SD1D_RS00710
location: 145704..147233
location: region:145704-147233:1
so has part: feature:145704-147233:1:exon

WP_058257148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145704-147233:1:exon

SD1D_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00715
old locus tag: SD1D_0145
so part of: sequence
location: 147246..147650
location: region:147246-147650:1
so has part: feature:147246-147650:1:exon
subclass of: SO_0000010

position:147246:1
position: 147246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147650:1
position: 147650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147246-147650:1:exon

SD1D_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00715
old locus tag: SD1D_0145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016323214.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNYDDIINLPHHESTKYPRMPIIDRAAQFSPFAALTGYEEAIKETERPVDERIQLSEDAIVKLDEQLQLVAGKADKQPPVEITYFVPDERKTGGKYVTVRGNIKKIDQLKKIIVLQGEKIIPINEIIDIIIIE
SIO_010081: SD1D_RS00715
subclass of: SO_0000673
so part of: SD1D_RS00715
location: 147246..147650
location: region:147246-147650:1
so has part: feature:147246-147650:1:exon

WP_058257149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147246-147650:1:exon

SD1D_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00720
old locus tag: SD1D_0146
so part of: sequence
location: complement(147672..148325)
location: region:147672-148325:-1
so has part: feature:147672-148325:-1:exon
subclass of: SO_0000010

position:147672:-1
position: 147672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148325:-1
position: 148325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147672-148325:-1:exon

SD1D_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00720
old locus tag: SD1D_0146
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020816014.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family phosphatase
translation: MIIFDLDGVILDSEPLHENAKRRILKEHGIDENLDLSFSVGQPNKLLWSNMIERFGINKSEEELERSQYNYILEEVKEKKIQTSRGLLRLLQWLKNQGIKIGLASSSDRHYVDAILKHYNLYDYFAYIVAGDEVARKKPEPDVYIKVLDQAKLNPDEAIAIEDTFAGSRAALSAGLKCIGYQNPTSGNQDLSPCFVKIDNLSQINKIIAGYMEGPSC
SIO_010081: SD1D_RS00720
subclass of: SO_0000673
so part of: SD1D_RS00720
location: complement(147672..148325)
location: region:147672-148325:-1
so has part: feature:147672-148325:-1:exon

WP_242955229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147672-148325:-1:exon

SD1D_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00725
old locus tag: SD1D_0147
so part of: sequence
location: complement(148370..149035)
location: region:148370-149035:-1
so has part: feature:148370-149035:-1:exon
subclass of: SO_0000010

position:148370:-1
position: 148370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149035:-1
position: 149035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148370-149035:-1:exon

SD1D_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00725
old locus tag: SD1D_0147
inference: COORDINATES: protein motif:HMM:NF014373.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MgtC/SapB family protein
translation: MSIFCGGLIGLEREDKRRPAGFRTHVLVCLGSSIIMILSEHVFRSYNHEFGTSSDPLRLGAQVISGIGFLGAGTIMRYGTNIKGLTTAASLWTVAAIGLSLGSGYYFLGISSSITVYIILVVFNKVEKKWRMKKHSFNTYEINIKMKNNAETLGKVNLIFHKYKAKILEMKFESEELEQLNDDDDIPITLFVIFRTLSGLDLSDLTQDINHLDGIISVERF
SIO_010081: SD1D_RS00725
subclass of: SO_0000673
so part of: SD1D_RS00725
location: complement(148370..149035)
location: region:148370-149035:-1
so has part: feature:148370-149035:-1:exon

WP_273232631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148370-149035:-1:exon

SD1D_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00730
old locus tag: SD1D_0148
so part of: sequence
location: complement(149115..149858)
location: region:149115-149858:-1
so has part: feature:149115-149858:-1:exon
subclass of: SO_0000010

position:149115:-1
position: 149115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149858:-1
position: 149858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149115-149858:-1:exon

SD1D_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00730
old locus tag: SD1D_0148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014314536.1
GO function: GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerophosphodiester phosphodiesterase family protein
translation: MWNQSKNNILVFGHRGLKAFYPENTMISFQKALEAGVDGIELDINMTKDGHLVIIHDTSVDRTTNGSGLVQNHTLRELKELDAGSHFSWEFKNEKIPTFEEFLDLVKYKDILLNVEIKDYRESVVDKTISMLEEYHLSDKYVITSFCADITTYAHEKYKVKTQGFPQWLVKNYKDDTNTHYYSVGIAMKYLTKELCDQYSSMNIDPWCYAPDNEEQVYKAIESGISLVTVNNPYPALKILKEKNLHS
SIO_010081: SD1D_RS00730
subclass of: SO_0000673
so part of: SD1D_RS00730
location: complement(149115..149858)
location: region:149115-149858:-1
so has part: feature:149115-149858:-1:exon

WP_058257151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149115-149858:-1:exon

SD1D_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00735
pseudo: true
so part of: sequence
location: complement(149927..150912)
location: region:149927-150912:-1
so has part: feature:149927-150912:-1:exon
subclass of: SO_0000010

position:149927:-1
position: 149927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150912:-1
position: 150912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149927-150912:-1:exon

SD1D_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004616000.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: alcohol dehydrogenase catalytic domain-containing protein
SIO_010081: SD1D_RS00735
subclass of: SO_0000673
so part of: SD1D_RS00735
location: complement(149927..150912)
location: region:149927-150912:-1
so has part: feature:149927-150912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149927-150912:-1:exon

SD1D_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00740
old locus tag: SD1D_0151
so part of: sequence
location: complement(150944..152311)
location: region:150944-152311:-1
so has part: feature:150944-152311:-1:exon
subclass of: SO_0000010

position:150944:-1
position: 150944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152311:-1
position: 152311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150944-152311:-1:exon

SD1D_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00740
old locus tag: SD1D_0151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020816025.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MIQKNYSYDVAVIGGGPSGLAAALAAARHGSKVVIIERNDYLGGNAVTGLPFLGFLDKHGRQVTGGIAQEMIDTLSEMGMSPGHNRCPLHNSVTIFHPDMFKIVAMEKCEQEGIHVLLHCELVDVTVTDKRITNVTVMGKGIRINIEANVFIDGTGDGDLAYLAGCSYEKGQEDSGVMQPPTLMFSLNGFDEEKFFKYLDEHPEDLQPAESMQVSQGYDTTYFRSHKSYVFLGLRNLLSRLRAEGKNPLTRDTLIYINSVNPGQIYVNTTRIHNFDGTDPEEITRGTKESMKQIMQIIKLLNEEVPGFENCYISSIIPTLGVRETRRFLGKKRLTKDDVENLRIPADTIALGSYKVDIHSGLNDTTILTDLEGPYGIPLGCLISSEVDSLLFSGRHISMDAYALGSVRVMPTCMAIGEAAGVCAALAVKRGISPAQVPDQDVVELLKEDNAILSI
SIO_010081: SD1D_RS00740
subclass of: SO_0000673
so part of: SD1D_RS00740
location: complement(150944..152311)
location: region:150944-152311:-1
so has part: feature:150944-152311:-1:exon

WP_058257152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150944-152311:-1:exon

SD1D_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00745
old locus tag: SD1D_0152
so part of: sequence
location: complement(152416..153441)
location: region:152416-153441:-1
so has part: feature:152416-153441:-1:exon
subclass of: SO_0000010

position:152416:-1
position: 152416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153441:-1
position: 153441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152416-153441:-1:exon

SD1D_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00745
old locus tag: SD1D_0152
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004615989.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MAVTILDVAREAGVSKSTVSLVINNSDRVKPETQYKVREAIKKLGYTPNIAARELTTNRTHTLGLIFLTSNINQKPYAFTSICETLLYDTSNGIYAGLADSQYSLLVERFSVTENSMPELIKNRRLDGVFLIGGLFTNHFIETLQKMKIPFVIIGRQYEGFDSISVDTEEVGYMGAKYLLEQGHKKIAFINGPITSSNSLKKVDGIQRALRDLDADPKSVEIIYSDSYSGLSGYNALQALWEQGLRPDAVFGGSDGLTSGASRFLYERALRIPDDISVLGYEDSILAEYATPALTVIDAHKEDLGKEASFVLINRIKKPRAKAVSLTIKPSLIIRDSVRSR
SIO_010081: SD1D_RS00745
subclass of: SO_0000673
so part of: SD1D_RS00745
location: complement(152416..153441)
location: region:152416-153441:-1
so has part: feature:152416-153441:-1:exon

WP_058257153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152416-153441:-1:exon

SD1D_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00750
old locus tag: SD1D_0153
so part of: sequence
location: 153722..154075
location: region:153722-154075:1
so has part: feature:153722-154075:1:exon
subclass of: SO_0000010

position:153722:1
position: 153722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154075:1
position: 154075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153722-154075:1:exon

SD1D_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00750
old locus tag: SD1D_0153
inference: COORDINATES: protein motif:HMM:NF019887.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD hydrolase family protein
translation: MVLLFADMNERMRARADLESLPFVEVSSSLDRNLELNRKGGNKGNGLKALAKYLNLNINQVMALGDSDNDITMIETAGLGIAMANAAPEIIKVADGVTDSNDEDGVAHAIERWVLNT
SIO_010081: SD1D_RS00750
subclass of: SO_0000673
so part of: SD1D_RS00750
location: 153722..154075
location: region:153722-154075:1
so has part: feature:153722-154075:1:exon

WP_273232894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153722-154075:1:exon

SD1D_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00755
old locus tag: SD1D_0154
so part of: sequence
location: 154133..155746
location: region:154133-155746:1
so has part: feature:154133-155746:1:exon
subclass of: SO_0000010

position:154133:1
position: 154133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155746:1
position: 155746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154133-155746:1:exon

SD1D_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00755
old locus tag: SD1D_0154
EC number: 2.7.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002601326.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
GO process: GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FGGY-family carbohydrate kinase
translation: MADINVINARKEAIKDGRTILGIELGSTRIKTVLVDENHKPIAIGNYDWENKYIDNVWTYDLEDIWKGLQGSYRDMANQVKSRYGLDITTVGAMGFSAMMHGYMAFNKEGKLLAPFRTWRNTITGQASDKLTELFQYNIPQRWSVAHLYQAILNGEEHVSDIDYLVTLSGYIHWKMTGCKVLGIGDASGMFPINLQTKDFNEKMLTQFDELLAQENLPWKLKEILPKVLVAGKEAGRLTEEGARLLDPTGNLKAGIPLCPPEGDAGTGMTATNCVAKRTCNVSAGTSVFAMVVLEDELSKVHKEIDLVMTPAGDPVAMAHSNNCTTDLDAWVSLFGEFLESMEIKPDISKLYSVLYNKALEGDIDCGGLLSYGYYAGEHITHLSEGRPLFVRMPDSNFNLANFMRVHLFTALGALKTGMDILYKEEQVKVDRVLGHGGLFKTKGVGQRILAAAMNSPVTVMETAGEGGAWGIALLAAYMLYKKKDETLDSYLANKVFADDLGITIKPDKNDVEGFEQFMKRYTKGLAIEQKAVEVLR
SIO_010081: SD1D_RS00755
subclass of: SO_0000673
so part of: SD1D_RS00755
location: 154133..155746
location: region:154133-155746:1
so has part: feature:154133-155746:1:exon

WP_058257155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154133-155746:1:exon

SD1D_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00760
old locus tag: SD1D_0155
so part of: sequence
location: 155908..157968
location: region:155908-157968:1
so has part: feature:155908-157968:1:exon
subclass of: SO_0000010

position:155908:1
position: 155908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157968:1
position: 157968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155908-157968:1:exon

SD1D_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00760
old locus tag: SD1D_0155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501045.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DHH family phosphoesterase
translation: MGKKLRLNSSLKGYLLWPIYLTVILLFMNISIYAIDKNAGYVMSAFILVYFLLALSVFYFKRHQINTELVRYAMDFAQVQKRLLKEMAVPYALLDIDGRLQWGNNEFMDLLEGKKAINRFISNIIPEITEDILPKAEKDEILDINLNNRSYRVVLRKVIAPSFDEDVNWNFSEPEKAWDTNNALIAMYLFDETEIIALKKENKEQRLVVGLLYIDNYDEALDSIDEVRRSLLTALVDRKINKYMQNIDAVIKKLEKDKFIFVFKQKYLSVLQNTKFSILEEVRNVNIGNEMSVTISIGLGVNADSYITGYEYARAAIDLALGRGGDQAIIKDGDKISYYGGKSIQVEKTTRVKARVKAHAFREFVEGKDKIVVMGHAIGDVDSFGAAIGVYRIGKTFNKKVHIVINEITTALRPMINRFIDNPDYEDDLFIQNEQAKEVVDANTLLVIVDVNRPSLLECKELLHYARTIIIFDHHRQTDEAIDNAALSYIEPYASSTCEMIAEILQYIGGNLKLRSVEADALYAGIMIDTNNFLTKAGVRTFEAAAYLRRNGADVTRLRKIFRSDFLEFKIKADAISSTEVYLDYYAIAVCAGADVDSPTVLGAQVANDLLNIANMKASFVFTEFNNKIYISARSIDEVNVQVIMEKLGGGGHLSVAGSQLENCTIEEAIIMLKEVLDTMVKEGEI
SIO_010081: SD1D_RS00760
subclass of: SO_0000673
so part of: SD1D_RS00760
location: 155908..157968
location: region:155908-157968:1
so has part: feature:155908-157968:1:exon

WP_058257156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155908-157968:1:exon

SD1D_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplI
locus tag: SD1D_RS00765
old locus tag: SD1D_0156
so part of: sequence
location: 157997..158443
location: region:157997-158443:1
so has part: feature:157997-158443:1:exon
subclass of: SO_0000010

position:157997:1
position: 157997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158443:1
position: 158443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157997-158443:1:exon

SD1D_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplI
locus tag: SD1D_RS00765
old locus tag: SD1D_0156
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201752.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L9
translation: MEVILIEDVKNLGKKGDVVKVSDGYARNFILPKKLGIEATKQNLHDLKLQKQAEEKRQKELLEEARQLASQLEAVKVNLTLKAGEGGKTFGSISTKEIANALNEQAGFNLDRKKIQLSEPIKSAGTFTVGVKLHPKVTASIKVVVEAV
SIO_010081: SD1D_RS00765
subclass of: SO_0000673
so part of: SD1D_RS00765
location: 157997..158443
location: region:157997-158443:1
so has part: feature:157997-158443:1:exon

WP_058257157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157997-158443:1:exon

SD1D_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: dnaB
locus tag: SD1D_RS00770
old locus tag: SD1D_0157
so part of: sequence
location: 158465..159793
location: region:158465-159793:1
so has part: feature:158465-159793:1:exon
subclass of: SO_0000010

position:158465:1
position: 158465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159793:1
position: 159793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158465-159793:1:exon

SD1D_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: dnaB
locus tag: SD1D_RS00770
old locus tag: SD1D_0157
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005427215.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MDEAFIKKILPHSMEAEQSVIGSMIMDKEAITLASEIISSSDFYDPQLGILFDTMLELFNEGKPVDLITLQNRLKEMDVPPQLSSLEYIRDLVSTVPTSANVKYYAQIVKEKAVLRRLIKVAEETANDCYLDKEKLDVILEKTEKQVFDIVQNRGTKEFTDIKDVVLRSIDSIEAASKNQGSVTGIATGFYDLDYKTAGLQPSDLILIAARPSMGKTAFALNIAEYVALRSNITTAIFSLEMSQDQLVKRLLAMNSRVDSQNIRTGNLSADEWASLMESARIIGNSDLVIDDTSAISVSELRSKCRKLKLEKNLGLVIIDYLQLMTGSKRSESRQQEISEISRSLKSLAREINVPVIALSQLSRAVEQRPDKRPMLSDLRESGAIEQDADVVMFIYRDDYYNHDTQEPGVSEIIIGKQRNGPTGTVKLAWQSQYTKFANLER
SIO_010081: SD1D_RS00770
subclass of: SO_0000673
so part of: SD1D_RS00770
location: 158465..159793
location: region:158465-159793:1
so has part: feature:158465-159793:1:exon

WP_058257158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158465-159793:1:exon

SD1D_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00775
old locus tag: SD1D_0158
so part of: sequence
location: 160014..160691
location: region:160014-160691:1
so has part: feature:160014-160691:1:exon
subclass of: SO_0000010

position:160014:1
position: 160014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160691:1
position: 160691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160014-160691:1:exon

SD1D_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00775
old locus tag: SD1D_0158
inference: COORDINATES: protein motif:HMM:NF024803.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MGDIRYMISEASKRVGVESHTLRYWEEELDLPVKRNEMGHRYYKDSDIEILKKIKILKEHGYQLKAIKMLLANLEHLESLDNQTIVKLKDELNGKVIDMWKDDNNLEVEQEEGTSIVSSEENNEIKAENQDKMQQFKAIMNQIVMSALKENNTQLSEEISTNVTSNVIKEMNYLMRLQEEREEERYRKFDATLRDYQKSRMQIAATYEGRRRKKSKFFKKNKVYI
SIO_010081: SD1D_RS00775
subclass of: SO_0000673
so part of: SD1D_RS00775
location: 160014..160691
location: region:160014-160691:1
so has part: feature:160014-160691:1:exon

WP_058257159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160014-160691:1:exon

SD1D_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00780
old locus tag: SD1D_0159
so part of: sequence
location: complement(160786..160953)
location: region:160786-160953:-1
so has part: feature:160786-160953:-1:exon
subclass of: SO_0000010

position:160786:-1
position: 160786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160953:-1
position: 160953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160786-160953:-1:exon

SD1D_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00780
old locus tag: SD1D_0159
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005540980.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MAHTINDECISCGACADQCPTSAISEGANHFEIDPDTCVDCGACVDICPTGSISA
SIO_010081: SD1D_RS00780
subclass of: SO_0000673
so part of: SD1D_RS00780
location: complement(160786..160953)
location: region:160786-160953:-1
so has part: feature:160786-160953:-1:exon

WP_058257160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160786-160953:-1:exon

SD1D_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00785
old locus tag: SD1D_0160
so part of: sequence
location: 161155..161355
location: region:161155-161355:1
so has part: feature:161155-161355:1:exon
subclass of: SO_0000010

position:161155:1
position: 161155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161355:1
position: 161355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161155-161355:1:exon

SD1D_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00785
old locus tag: SD1D_0160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016280598.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1858 domain-containing protein
translation: MATITKDMTIAQAIAMDQNIIPVLLDIGMHCLGCPSAQGETLEEAAMVHGIDPDDLMERITAVTGE
SIO_010081: SD1D_RS00785
subclass of: SO_0000673
so part of: SD1D_RS00785
location: 161155..161355
location: region:161155-161355:1
so has part: feature:161155-161355:1:exon

WP_058257161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161155-161355:1:exon

SD1D_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00790
old locus tag: SD1D_0161
so part of: sequence
location: complement(161430..162185)
location: region:161430-162185:-1
so has part: feature:161430-162185:-1:exon
subclass of: SO_0000010

position:161430:-1
position: 161430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162185:-1
position: 162185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161430-162185:-1:exon

SD1D_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00790
old locus tag: SD1D_0161
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201747.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adaptor protein MecA
translation: MKIEKISDNQIRCTLNKSDLIDRELKLSELAYGTEKAKALFRDMIQQAFYEFGFEVDDIPLMIEAIPVSTECLILVITKVEDPDELDTRFSKFSSFNTHDFTDKSDEDDVYADEIINTFEHLNDFSEDADDKPKGFIDIPDSLDDDKSKVNIPTNLTKIYSFRSLKELTKLANVLAGIYKGNNTLYKDPATGTYYLVLSISSHTPEEFNKISNIISEFGKAERTTYASVNYYEEHYEIIVKDQALQILSVM
SIO_010081: SD1D_RS00790
subclass of: SO_0000673
so part of: SD1D_RS00790
location: complement(161430..162185)
location: region:161430-162185:-1
so has part: feature:161430-162185:-1:exon

WP_058257162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161430-162185:-1:exon

SD1D_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00795
old locus tag: SD1D_0162
so part of: sequence
location: 162486..163856
location: region:162486-163856:1
so has part: feature:162486-163856:1:exon
subclass of: SO_0000010

position:162486:1
position: 162486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163856:1
position: 163856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162486-163856:1:exon

SD1D_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00795
old locus tag: SD1D_0162
EC number: 2.7.11.1
inference: COORDINATES: protein motif:HMM:NF012298.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO process: GO:0006468 - protein phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine/threonine-protein kinase
translation: MQEEIWFGKYRIQKLLGQGGTAKVYLAEHIKLNSFRAIKYISKHHPLYKLQLKEAQILKDLKHSCIPIIYDIEEDEEGSYIIEQYLEGVTLKDYVMERNTLSEDMIICFALQLCDLIHYLHSVKRPVLYLDLKPENIMVTGKTLMLIDFGSAIYRDEIKSKTKFYGTIGYAAPELYNNHPVDEKSDIYGIGMLLYFMVTGKLSYKSREDIKHIDYISNCSKKLKHIISRCLRYNSSQRYTCVSQLQKHLSAIMNNKNYKVMKGSSIEIGIAGSQPRIGTTHLSFSLCTYLIQKNISCLYIEYNKSRCLWKIQKRYFNLKKNKGVVKINSIPMVNMDYAQVMDLSKYNIIVKDYGSLDSDNKEEYLKSQVKILLLGAKDWELGFSEEALKLITEYKDIIFLFNYVDTRQFGQAQKSMIFRNCLRIPYEPNPFAKFKDKVSHDFFKELADLCFEGVIS
SIO_010081: SD1D_RS00795
subclass of: SO_0000673
so part of: SD1D_RS00795
location: 162486..163856
location: region:162486-163856:1
so has part: feature:162486-163856:1:exon

WP_058257163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162486-163856:1:exon

SD1D_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00800
old locus tag: SD1D_0163
so part of: sequence
location: 163832..164554
location: region:163832-164554:1
so has part: feature:163832-164554:1:exon
subclass of: SO_0000010

position:163832:1
position: 163832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164554:1
position: 164554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163832-164554:1:exon

SD1D_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00800
old locus tag: SD1D_0163
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFRRSDILIKRPLLQSKPMVKKYIHKKPILKKNRLKKPILLNKLQINKSYEAIRTIGLLGVNRGVGVTYTGMLLAYYYATEKGFKTAYLECNNHMDFQRLQEAYEWSREDEKSFSLDNITYFKQVTKKQLVDILSEDYECYILDFGTDFISSKEEFIRCDKKVIIGDNGVWNLSKMLAFLKSLDNIKGSKSWIYMIPFADRRVLMGMKDETDRFFFKIPFESDFTNLSKESFTLFHKLFD
SIO_010081: SD1D_RS00800
subclass of: SO_0000673
so part of: SD1D_RS00800
location: 163832..164554
location: region:163832-164554:1
so has part: feature:163832-164554:1:exon

WP_157893076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163832-164554:1:exon

SD1D_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00805
old locus tag: SD1D_0164
so part of: sequence
location: 164948..166651
location: region:164948-166651:1
so has part: feature:164948-166651:1:exon
subclass of: SO_0000010

position:164948:1
position: 164948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166651:1
position: 166651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164948-166651:1:exon

SD1D_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00805
old locus tag: SD1D_0164
inference: COORDINATES: protein motif:HMM:NF012907.2
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyl hydrolase family 18 protein
translation: MDKKNKISIVGMIIAILLIGAGIGVFVIKNMTPSNEVMLLTDYYKVEDTEAIIILQDEIHDKPGIIADGMVYIDLETVVNCFNHRFYWDDNENILTYTTPTEIIQVDGVGNKYFVTKSMIKTEATSDYPILKLYNDDIYIALDFVDQYSDIQYRSYEEPNRVVIDYLWGEYLYTKVTKNTQLRSEPDIKSPLLLQLPVGEELMYVVKEDAPRKGFAKVMTKEGIIGYVRERHVQDSYYKTIESTYEPPEYTSQLRNDKINLVFHQFFNYEAGMKLEELISQTKGVNVVSPTWFDIIDETGEISSLASSEYVEKAKSLGLQVWPLIADVNKEVDMNELLSHTSRREKLSNALIEAAINYKVNGINIDFEKIPSEAGEHYIQFLRELSVKCRNNGIVLSVDNYVPAPYNKHYNLKEQGEILDYVIIMAYDEHYAGSDVAGPVASLGFVSDAVNNTLEEVPKEKVIIAIPFYTRLWKETTDGVSSESLAMASAAKLLEDKGVEPKWNDGYGSHYGEFKQDGAVYKIWLENEKSIEEKMKVIYEADVAGVGAWKLGLEEKKVWDIIGRYLD
SIO_010081: SD1D_RS00805
subclass of: SO_0000673
so part of: SD1D_RS00805
location: 164948..166651
location: region:164948-166651:1
so has part: feature:164948-166651:1:exon

WP_058257165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164948-166651:1:exon

SD1D_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00810
old locus tag: SD1D_0165
so part of: sequence
location: 166787..167500
location: region:166787-167500:1
so has part: feature:166787-167500:1:exon
subclass of: SO_0000010

position:166787:1
position: 166787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167500:1
position: 167500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166787-167500:1:exon

SD1D_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00810
old locus tag: SD1D_0165
EC number: 3.5.1.28
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201743.1
GO function: GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO process: GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MKRKYFSILFLLLIFAARVISSDKSVKVMRNLFEENKIEGEKTKVTIVIDPGHGGRDPGKVGVNGALEKDVNLAIALKLKDLLEQNDINVIMTRTEDIGLYSETDSNKKRVDLNKRVEIINNSDAAFAISIHQNSFSQENVKGAQVFYHIQSEEGRVLAGILQEQIKETINDGNHRKAKSNTNYYMLKHTLCPLVIVECGYLSNWTEAKLLVDEDYQEKMAWAIHLGILKYLNINKN
SIO_010081: SD1D_RS00810
subclass of: SO_0000673
so part of: SD1D_RS00810
location: 166787..167500
location: region:166787-167500:1
so has part: feature:166787-167500:1:exon

WP_058257166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166787-167500:1:exon

SD1D_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00815
old locus tag: SD1D_0166
so part of: sequence
location: 167650..168705
location: region:167650-168705:1
so has part: feature:167650-168705:1:exon
subclass of: SO_0000010

position:167650:1
position: 167650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168705:1
position: 168705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167650-168705:1:exon

SD1D_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00815
old locus tag: SD1D_0166
EC number: 2.7.7.87
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201742.1
GO function: GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-threonylcarbamoyladenylate synthase
translation: MMTIIKKADNGTLGEDDLKKAAKILQRGGLVAFPTETVYGLGADALNPEAAKKIYEAKGRPSDNPLIVHIANPKHMELIARDIPREAYKLAETFWPGPLTIILNKKEIVPYNTTGGLDTVAIRLPANKIARDVIAYSGGFIAAPSANISGRPSPTRAQHVIDDLDGKIDMIIDGGKSTLGLESTIVDLSGDIPMILRPGSITKSMVESVIGSVEYDKAITKETMDENIAPKAPGMKYRHYAPEGCLVIYEGNIQDVATAINNKARLYLEEGKTVGIIATDETKSLYKYGIIKSIGSRNEEDSIAAGLYAVLRDFDEIHADYIFSESFAGGNLGQAIMNRLLKAAGYRVEKL
SIO_010081: SD1D_RS00815
subclass of: SO_0000673
so part of: SD1D_RS00815
location: 167650..168705
location: region:167650-168705:1
so has part: feature:167650-168705:1:exon

WP_058257167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167650-168705:1:exon

SD1D_RS12245
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12245
old locus tag: SD1D_0167
so part of: sequence
location: 168728..169195
location: region:168728-169195:1
so has part: feature:168728-169195:1:exon
subclass of: SO_0000010

position:168728:1
position: 168728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169195:1
position: 169195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168728-169195:1:exon

SD1D_RS12245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12245
old locus tag: SD1D_0167
inference: COORDINATES: protein motif:HMM:NF013607.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: low molecular weight protein arginine phosphatase
translation: MAKYNKLIFVCTGNTCRSPMAEAIFKNLDQESDIKVSSRGIVVLFGEPINPKAEIVLKKHDLELVNHISKRLKDTDIDENTLVLTMTEAHKRKILQGYPHAKDVYTIKEYAGEDGDVIDPYGGSLVEYEDCYFELARLVKKTVYKLNEENEKESL
SIO_010081: SD1D_RS12245
subclass of: SO_0000673
so part of: SD1D_RS12245
location: 168728..169195
location: region:168728-169195:1
so has part: feature:168728-169195:1:exon

WP_058257168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168728-169195:1:exon

SD1D_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpiB
locus tag: SD1D_RS00820
old locus tag: SD1D_0168
so part of: sequence
location: 169195..169626
location: region:169195-169626:1
so has part: feature:169195-169626:1:exon
subclass of: SO_0000010

position:169626:1
position: 169626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169195-169626:1:exon

SD1D_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpiB
locus tag: SD1D_RS00820
old locus tag: SD1D_0168
EC number: 5.3.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008707935.1
GO function: GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose 5-phosphate isomerase B
translation: MIALGNDHTGYELKMEIIKYLEEKGIEYKDFGCGKLSSSDYPVYAKAVGRAIQNKECDKGILICGTGIGISIAANKMKGIRAALCHDCFSAEATRLHNDANVLVMGARVIGHGLAIKIVDTFLNTDFSNQDRHIRRIEMLEDQ
SIO_010081: SD1D_RS00820
subclass of: SO_0000673
so part of: SD1D_RS00820
location: 169195..169626
location: region:169195-169626:1
so has part: feature:169195-169626:1:exon

WP_058257169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169195-169626:1:exon

SD1D_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00825
old locus tag: SD1D_0169
so part of: sequence
location: 169654..170511
location: region:169654-170511:1
so has part: feature:169654-170511:1:exon
subclass of: SO_0000010

position:169654:1
position: 169654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170511:1
position: 170511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169654-170511:1:exon

SD1D_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00825
old locus tag: SD1D_0169
inference: COORDINATES: protein motif:HMM:NF020264.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YwmB family TATA-box binding protein
translation: MGILTGKQNQLTMEVDILDKTSRFLESLQGIFSLRRTKVTLYTATVLWLAFATQIIMNRVFFNNFQIAEAFVKTNTEDLECSLEIIAEHNNDFLSEEDKKNIIGYIADSIGLKIDKDITINKDNGRIEYLYQKDARLATTSLKIVSLEQENESAIKMKHYIVVRLNIKESIRSIEKYRKLLEETLKELGIKQKQVTLQYEGSVPGIMPIEDKKDMARLLVKELQGEIAFDYQQSDSYTIYAYTGLIDEYVEAAGCKINIQIAMTYDEQLDKTRIYFATPIINQGW
SIO_010081: SD1D_RS00825
subclass of: SO_0000673
so part of: SD1D_RS00825
location: 169654..170511
location: region:169654-170511:1
so has part: feature:169654-170511:1:exon

WP_058257170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169654-170511:1:exon

SD1D_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00830
old locus tag: SD1D_0170
so part of: sequence
location: complement(170612..171595)
location: region:170612-171595:-1
so has part: feature:170612-171595:-1:exon
subclass of: SO_0000010

position:170612:-1
position: 170612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171595:-1
position: 171595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170612-171595:-1:exon

SD1D_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00830
old locus tag: SD1D_0170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNSSNMSKSEGDKKLNVQISEEKTSPDNDNLSNKVSSPDTDKANTLDTVNRKQHNQTGVAKKLSTTPDTGMPMDIGTPPRTDTPMNGTTPRSGMPMNGITPRTGMPMNGTTPRSGMPMNGTTPRSGMPMNGTTPRSGMPMNGTTPRTGMPMNDTAPRSGMPMNGTTPRTGMPMNGTSSGNIPLYPVNGQYMPPCTPYNTPMGVPLYPLYGYDNCEDLDRDMKYMKQIYPNTAKRIQREIDNECDKLEYDGSIMFDECPDKVSLERIIDRVYERVKDMDEVSEIGINSFSSDPRRRQQNLLRDLVTIVLLNEMFHRRRRRRSRRRWF
SIO_010081: SD1D_RS00830
subclass of: SO_0000673
so part of: SD1D_RS00830
location: complement(170612..171595)
location: region:170612-171595:-1
so has part: feature:170612-171595:-1:exon

WP_058257171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170612-171595:-1:exon

SD1D_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00835
old locus tag: SD1D_0171
so part of: sequence
location: 171799..174351
location: region:171799-174351:1
so has part: feature:171799-174351:1:exon
subclass of: SO_0000010

position:171799:1
position: 171799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174351:1
position: 174351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171799-174351:1:exon

SD1D_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00835
old locus tag: SD1D_0171
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKQIYRIIILIAIFIASLYYFSKDIKEVVFNIDNTTKMEEATFPLVRLRTEDVIINLLHGYSSNLDANSIRESLTPIGPEGSFEVLIQESDYEIKKLNYEVREFIGNELIEKGSVSVFDEENEFKTAKLHLSPDLQKEKDYAVKITLITSESRKMYYYTRIKKYDSGNLKKKLEFVMDFHNAIKDKEKAEEYSVYLEPHRTKENTSLADVNIHSSLELITWGKLEPEFITEVVPTVVENYAEIASFVLEYVVKAKVSDIPEFYKVKEYYRVRYTPGRTYLLNYERRMEALFDTDLTNVSMNQLKLGITSNLDIPYLAGPDKMKFAFVRNRELWFYDLEENKIVRIFSFRQNKTDYIRDIYDQHDIRILNMDAEGNVNFMVYGYMNRGQYEGRVAIVLYKYIRADQRIEELVYIPVDEPYQRLKENMGELSYINNLDIFYFHIYDSIYSYDMITKQLTKLASNVAKDNILDFSKEGYFVWQESDGLGYSNNINIMNLETGDIQKIDSRPGYKIVLLDMIDMNLIYGFVAENDITTMIDGRVIIPMNRIEIASLQNEILKSYNKEGYYITGVEVKDNIVELYRSKKGKVNGKDVYVSSSSDYIMNRIVEKTPFISVVPRVSEAALTEYYIQLPSEFDMDKEPKMLTTVNTIISDDPTLRLPKDGENISNEKQYYAYIMGELEETYKEAAEAINAADQGAGVVLSSLNHLVWERGVNASRINLSKFETMDFSASSNSLESCIKLMAKYLGKNIDNKTLDLKDTSALEILNKDLKVEPIRLTGSTLDQVLYYINKGRPVIAMTGYNDAILIYGYDAYNIYMIDPKQGKSVKIGLQDSRDLFENAGNIFISYLD
SIO_010081: SD1D_RS00835
subclass of: SO_0000673
so part of: SD1D_RS00835
location: 171799..174351
location: region:171799-174351:1
so has part: feature:171799-174351:1:exon

WP_058257172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171799-174351:1:exon

SD1D_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00840
old locus tag: SD1D_0172
so part of: sequence
location: 174430..175548
location: region:174430-175548:1
so has part: feature:174430-175548:1:exon
subclass of: SO_0000010

position:174430:1
position: 174430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175548:1
position: 175548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174430-175548:1:exon

SD1D_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00840
old locus tag: SD1D_0172
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009246877.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminopeptidase
translation: MDERIKTLASNLVNYSMEVKKGDKVYVHYIGESTEDLARQLVKEVYKAGGVPFVHYTNPRLLREVLLNCSEEQMSLMAKIDAAEMAEMDCYVAVRGSDNIAENADVAQEKMKLYETYYQTPVHHDIRVKKTRWVVLRYPNASMAQLANMSQEAFEDFYFKVCNLDYGKMDEAMKSLVDYMNRTDKVRIVGPGTDLTFSIKGIPAIPCSGRRNIPDGEVYTAPVKDSINGTLTYNTPAVFQGFTFENISFRFENGKIVEATANDTERINEVLNTDEGARYIGEFAIGVNPYILKPMKDTLFDEKIMGSFHFTPGNCYEEEAPNGNSSAIHWDLVCIQTPEYGGGEIYFDDVLIRKDGRFVVKELECLNPENLI
SIO_010081: SD1D_RS00840
subclass of: SO_0000673
so part of: SD1D_RS00840
location: 174430..175548
location: region:174430-175548:1
so has part: feature:174430-175548:1:exon

WP_058257173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174430-175548:1:exon

SD1D_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00845
old locus tag: SD1D_0173
so part of: sequence
location: 175565..176581
location: region:175565-176581:1
so has part: feature:175565-176581:1:exon
subclass of: SO_0000010

position:175565:1
position: 175565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176581:1
position: 176581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175565-176581:1:exon

SD1D_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00845
old locus tag: SD1D_0173
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002586302.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MKLLTAAIPCYNSAEYMRHAIDTLLSGGDDMEIIIVNDGSKDDTEKIGLEYQEKYPSIVRVISQENGGHGEAVNTGLANATGLYFKVVDSDDWVSEKALSEILAKLKELIADGNSPDLFLANYVYEKVGAKRKKVIHYNRALPKNQIFTWDDIMHFKQSQNILMHSAIYRTKLIKDCGLKLPKHTFYVDNIFVYQPLPYVKTMYYMDVNLYRYFIGRDDQSVNEKIMIKRIDQQLRVTKIMIESHNLAQIKSKKLRNYMIKYLSMMMAICSVFLIKEGSDESIAKKEALWEYLKNYDKWLYKRIRSHILGRSMNLPGKFGRRVVEVGYAITRKIYGFN
SIO_010081: SD1D_RS00845
subclass of: SO_0000673
so part of: SD1D_RS00845
location: 175565..176581
location: region:175565-176581:1
so has part: feature:175565-176581:1:exon

WP_058257174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175565-176581:1:exon

SD1D_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00850
old locus tag: SD1D_0174
so part of: sequence
location: complement(176680..177375)
location: region:176680-177375:-1
so has part: feature:176680-177375:-1:exon
subclass of: SO_0000010

position:176680:-1
position: 176680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177375:-1
position: 177375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176680-177375:-1:exon

SD1D_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00850
old locus tag: SD1D_0174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006427437.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatase PAP2 family protein
translation: MKFNKNKDKKFIHILSQYRHGLVLVYFFIYMIWFTYLERTVTTEFTPVYSRLDDYIPFLEIFIIPYFIWFAYIFVTVAYFFFTSKQDFYKCCAFLFIGMTICLIIYTIWPNGHYLRVDIDNLGRSNIFTRILSRLYTIDTSTNVFPSIHVFNSIGAMIAIRKSERLRPITWLQISTFILTVLICMSTVFLKQHSILDVFGGILLSIIMYIFVYVPAWGKEAKKADHELSKI
SIO_010081: SD1D_RS00850
subclass of: SO_0000673
so part of: SD1D_RS00850
location: complement(176680..177375)
location: region:176680-177375:-1
so has part: feature:176680-177375:-1:exon

WP_058257175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176680-177375:-1:exon

SD1D_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00855
old locus tag: SD1D_0175
so part of: sequence
location: 177670..178845
location: region:177670-178845:1
so has part: feature:177670-178845:1:exon
subclass of: SO_0000010

position:177670:1
position: 177670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178845:1
position: 178845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177670-178845:1:exon

SD1D_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00855
old locus tag: SD1D_0175
EC number: 5.4.2.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003503406.1
GO function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO process: GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphopentomutase
translation: MKRVFLVVLDSVGIGQLPDAKDYNDEGSHTLYAVSKSEHFHMPHMKNLGLFNIDGVKDRFTHMNFDHNYAGSIARLAEKSKGKDTTTGHWEIAGLISNKPFPTYPNGFPEEIIKEFEEKTGRKVLCNHPYSGTEVIREYGKEHIETGALIVYTSADSVFQVAAHEDIIPVEELYRYCEIARKILRGEHGVGRVIARPFIGTYPNFTRTSNRHDYSLAPSLTMLDQLVEAGLDVIGVGKIYDIFAGKGITDSVRTKNNQEGIDRLIERISKDFEGLCFVNLVDFDMIYGHRNDIDGYAKALSYFDSRLPEITEALRDEDILIITADHGCDPSTPSTDHSREYVPMVAYGSKIKRNNNLGTRESFADIAATILDYFNIQSKISGKSFLNDIIG
SIO_010081: SD1D_RS00855
subclass of: SO_0000673
so part of: SD1D_RS00855
location: 177670..178845
location: region:177670-178845:1
so has part: feature:177670-178845:1:exon

WP_058257176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177670-178845:1:exon

SD1D_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: dtd
locus tag: SD1D_RS00860
old locus tag: SD1D_0176
so part of: sequence
location: 178908..179354
location: region:178908-179354:1
so has part: feature:178908-179354:1:exon
subclass of: SO_0000010

position:178908:1
position: 178908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179354:1
position: 179354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178908-179354:1:exon

SD1D_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: dtd
locus tag: SD1D_RS00860
old locus tag: SD1D_0176
EC number: 3.1.1.96
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016440508.1
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-aminoacyl-tRNA deacylase
translation: MRIVIQRVLEAKVEVDSKCIGKIGKGFLILLGVGQDDDKKIADKYIDKILKLRIFADENGKTNLSLKDVEGEVLVVSQFTLYADCRKGNRPDFFKAGSAKKAEELYEYFLKQIKEKLGKVECGEFGADMKVHLVNDGPFTIILDEDLV
SIO_010081: SD1D_RS00860
subclass of: SO_0000673
so part of: SD1D_RS00860
location: 178908..179354
location: region:178908-179354:1
so has part: feature:178908-179354:1:exon

WP_058257177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178908-179354:1:exon

SD1D_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00865
old locus tag: SD1D_0177
so part of: sequence
location: 179495..180271
location: region:179495-180271:1
so has part: feature:179495-180271:1:exon
subclass of: SO_0000010

position:179495:1
position: 179495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180271:1
position: 180271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179495-180271:1:exon

SD1D_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00865
old locus tag: SD1D_0177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198146.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MIQINELTKIYKLTKKQMMEHKTKKNMMKAVDNISLTAKPGEIYGLLGPNGAGKTTALRCISTLLKPTEGEIKVCGYDTVKDSENVRKKIGFLTNEIKLDPQFSPRYMFDFFGKLRGLDEETIKQRREKLFAYFGINGFEDKKINELSSGMKQKASIAVSLIHDPEVIIFDEPTTGLDIVTARSVTDYLKLMKDQGKTVIISTHIMTEAEKLCDKIGIIIKGQLTLEGSLEEILSETNTKDLEDAFFELYKQHNKEEA
SIO_010081: SD1D_RS00865
subclass of: SO_0000673
so part of: SD1D_RS00865
location: 179495..180271
location: region:179495-180271:1
so has part: feature:179495-180271:1:exon

WP_058257178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179495-180271:1:exon

SD1D_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00870
old locus tag: SD1D_0178
so part of: sequence
location: 180273..181493
location: region:180273-181493:1
so has part: feature:180273-181493:1:exon
subclass of: SO_0000010

position:180273:1
position: 180273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181493:1
position: 181493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180273-181493:1:exon

SD1D_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00870
old locus tag: SD1D_0178
inference: COORDINATES: protein motif:HMM:NF024091.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MEGTKNIIKKELTRVFTDKKLIVSLFILPGVLIMVMYSIMGSLISNLQEDIETHTPIICIKNAPEDLMNFIEANKYEADITYLSSTDTVDDIKEKILKGDTDLLVVFEEGFMDTIQNYSKIGDPIPEVKTFYNPSEDYSGAARSNFIAEVLNPYQQSLLAQRLDNIELLQVFYIDLDPEASIILDEDKAGGKFFAMLLPFLINIMLFQGAMGLGVDTITGEKERGTLASMLLSPIKRSQIVFGKLISLGILTALSSVIYTVSVVIGIKNLSGGDTDQMMAIKFTPVEIIQLFVIIIAMVYLYVAMVALVAVYARTQKEASTYVTPLYILVMLGSIMTMFSSGGGDKGLEYYAIPIYNGSVTIQNLLVGELTMAQFGVTLGSLALIAILLTTLITKAFNSERVMFNA
SIO_010081: SD1D_RS00870
subclass of: SO_0000673
so part of: SD1D_RS00870
location: 180273..181493
location: region:180273-181493:1
so has part: feature:180273-181493:1:exon

WP_058257179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180273-181493:1:exon

SD1D_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00875
old locus tag: SD1D_0179
so part of: sequence
location: 181519..181788
location: region:181519-181788:1
so has part: feature:181519-181788:1:exon
subclass of: SO_0000010

position:181519:1
position: 181519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181788:1
position: 181788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181519-181788:1:exon

SD1D_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00875
old locus tag: SD1D_0179
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTVWDNLFTILIFAIPFLILQVFFSTRKKLIWGIIVPVLWSAFGVWHIISNYRQQSQNIKELIIFYIIGNLILIGILVLVRYIKGRYK
SIO_010081: SD1D_RS00875
subclass of: SO_0000673
so part of: SD1D_RS00875
location: 181519..181788
location: region:181519-181788:1
so has part: feature:181519-181788:1:exon

WP_058257180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181519-181788:1:exon

SD1D_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00880
old locus tag: SD1D_0180
so part of: sequence
location: 181923..183629
location: region:181923-183629:1
so has part: feature:181923-183629:1:exon
subclass of: SO_0000010

position:181923:1
position: 181923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183629:1
position: 183629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181923-183629:1:exon

SD1D_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00880
old locus tag: SD1D_0180
inference: COORDINATES: protein motif:HMM:NF012311.2
GO function: GO:0008236 - serine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S8 family serine peptidase
translation: MIPEERERIISEDYADLIIEYNGDFSVFEQFPDRTVQIINLQYAIVHVPVSFITQNIVYRLGYSVLPTCFGIISRSSLESSGIFRIRNIPVFNLRGQGVLIGIIDTGIDYTNPIFTYADNTTRIVSIWDQTISSGNPPPHMEYGTQFTREQINEALQSEDPFSIVPSRDEIGHGTMIAGIAGGNEVPDSNFYGVAPDAEFVVVKLKPAKKFIRDFFFIAEDAVCFQENDIFLGLIHLYEMSIALQRPIAICIALGSSQGAHDGSGTLSTFLSGIASSPGMAMVVAAGNEGNARRHFSGKVNPTTGYDTVELNVGENERGFTMELWGTSPDMYTIDILSPTGEYIPRISVGRNEHREIAFIFEATVIYIDYQMTESQSGEQLILIRFENPTSGIWRFNVYERRGLNLGFNIWLPMDGFISDDTYFIRSDPNTTILTLGNAENVLTVTAYNDADDSLYLNSSRGYTVIGRVKPEVAAPGVNIIGPTLTGGFASYTGTSVSAAHTTGIAAMLLEWAVVNNRLPAMSTVELKNLIIRGARRDIDTIYPNRDWGYGILDIFNVFDALRGGINF
SIO_010081: SD1D_RS00880
subclass of: SO_0000673
so part of: SD1D_RS00880
location: 181923..183629
location: region:181923-183629:1
so has part: feature:181923-183629:1:exon

WP_058257181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181923-183629:1:exon

SD1D_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00885
old locus tag: SD1D_0181
so part of: sequence
location: 183654..185357
location: region:183654-185357:1
so has part: feature:183654-185357:1:exon
subclass of: SO_0000010

position:183654:1
position: 183654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185357:1
position: 185357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183654-185357:1:exon

SD1D_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00885
old locus tag: SD1D_0181
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF012311.2
GO function: GO:0008236 - serine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S8 family peptidase
translation: MTIIDRDRIIGEDFFDLIIEYRTYTGLIELFGEEALHRIDEIYAVLHVPVEQFFAEISNVRYAEIPLLFGLTDVTSLDASRVLDLRQTPAFNLRGEGVIIAIIDTGIDYTNPVFIRPDGTSKILSIWDQTINTGPTYQEANFGTIYSREQINQALASDDPLSIVPSMDENGHGTMLAGIAAGNDVEEENFYGVAPDADLIIVKLREAKQITRRFFRVPNNVTCFQENHIMWALNYCNQEARRLNRPLVICFGIGSSQGGHTGRSPLSVVLNIVADLPDTVVVTSAGNEGNLGRHYYGVIDPTIGSNTVELNVSENDKQFAMELWGNPPGIYSIDVLSPSGEYIPRIPASIRVGRVISFIFEQTTLYVDYSTIESQTGDQLILIRFDNASAGIWRFNVYGHGDLATGFHIWLPMGNFISENTYFIQPNIFTTVLSPGTTTYPITVTSYNPVNNNLYVNAGRGYTRNNTIKPEIAAPGVNYLAPSLNHTFQAFTGTSVSAAHTAGVVALILEWGTVRGNEPGMDSNVLKNHLIRGARRSTNLTYPNRDWGYGILDVFKVFENMRADLGF
SIO_010081: SD1D_RS00885
subclass of: SO_0000673
so part of: SD1D_RS00885
location: 183654..185357
location: region:183654-185357:1
so has part: feature:183654-185357:1:exon

WP_058257182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183654-185357:1:exon

SD1D_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: spoVT
locus tag: SD1D_RS00890
old locus tag: SD1D_0182
so part of: sequence
location: 185497..186045
location: region:185497-186045:1
so has part: feature:185497-186045:1:exon
subclass of: SO_0000010

position:185497:1
position: 185497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186045:1
position: 186045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185497-186045:1:exon

SD1D_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: spoVT
locus tag: SD1D_RS00890
old locus tag: SD1D_0182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004058960.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage V sporulation protein T
translation: MKATGIVRRIDDLGRVVVPKEIRRTLRIREGDPLEIFTDREGEIILKKYSPIGELGQFAKQYADSLNQTTGYIVAITDKDQFIAVAGSIKKDLLGKGISRELEELINERETAIASNEEKNFLKITNDDDTEFTYQVICPIISEGDAIGSVIILTRDEKVKFGDTEIKLASTAAAFLGRQMEQ
SIO_010081: SD1D_RS00890
subclass of: SO_0000673
so part of: SD1D_RS00890
location: 185497..186045
location: region:185497-186045:1
so has part: feature:185497-186045:1:exon

WP_058257183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185497-186045:1:exon

SD1D_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: mazG
locus tag: SD1D_RS00895
old locus tag: SD1D_0183
so part of: sequence
location: 186197..186973
location: region:186197-186973:1
so has part: feature:186197-186973:1:exon
subclass of: SO_0000010

position:186197:1
position: 186197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186973:1
position: 186973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186197-186973:1:exon

SD1D_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: mazG
locus tag: SD1D_RS00895
old locus tag: SD1D_0183
EC number: 3.6.1.9
inference: COORDINATES: protein motif:HMM:NF007113.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside triphosphate pyrophosphohydrolase
translation: MDKTYSFNEFMDIIRKLRSKEGCPWDREQTHESLRQCLIEEAYEVIEAINNQDSKNLCEELGDLLLQVAMHSVIAEETGEFTVEDVISEESRKMIRRHPHVFGNLTADSTKEVLKNWEDIKALEKSHVNNPEQDIKSVPKALPALIRARKVQEKAVKYGLDPGSPDKALDDITKGLDILRKAIEIGEKSRINNDFGNLLFQMIKLSVVLQINAENSLTNAINQFINRFIDVLYPQEGNGHNLCAVTPHKQEALWWEKN
SIO_010081: SD1D_RS00895
subclass of: SO_0000673
so part of: SD1D_RS00895
location: 186197..186973
location: region:186197-186973:1
so has part: feature:186197-186973:1:exon

WP_087758707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186197-186973:1:exon

SD1D_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00900
old locus tag: SD1D_0184
so part of: sequence
location: 186997..187272
location: region:186997-187272:1
so has part: feature:186997-187272:1:exon
subclass of: SO_0000010

position:186997:1
position: 186997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187272:1
position: 187272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186997-187272:1:exon

SD1D_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00900
old locus tag: SD1D_0184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008977591.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0030261 - chromosome condensation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKAELVAAIAERTEFSKKDSEKALKAFIDVVSEELAKGGKVQLVGFGTFEVVDRPARTGRNPLTNEPMMIAASKAPKFKAGKALKDIVNA
SIO_010081: SD1D_RS00900
subclass of: SO_0000673
so part of: SD1D_RS00900
location: 186997..187272
location: region:186997-187272:1
so has part: feature:186997-187272:1:exon

WP_058257185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186997-187272:1:exon

SD1D_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00905
old locus tag: SD1D_0185
so part of: sequence
location: 187369..187608
location: region:187369-187608:1
so has part: feature:187369-187608:1:exon
subclass of: SO_0000010

position:187369:1
position: 187369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187608:1
position: 187608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187369-187608:1:exon

SD1D_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00905
old locus tag: SD1D_0185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016297740.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-binding S4 domain-containing protein
translation: MRLDKFLKVSRLIKRRTVANEACDAGRVLVNGKVAKASTIVRVGDIIEIGFGSKTVKVEVLEVLETVKKDEAKEMIKYL
SIO_010081: SD1D_RS00905
subclass of: SO_0000673
so part of: SD1D_RS00905
location: 187369..187608
location: region:187369-187608:1
so has part: feature:187369-187608:1:exon

WP_058259149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187369-187608:1:exon

SD1D_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: yabP
locus tag: SD1D_RS00910
old locus tag: SD1D_0186
so part of: sequence
location: 187712..187999
location: region:187712-187999:1
so has part: feature:187712-187999:1:exon
subclass of: SO_0000010

position:187712:1
position: 187712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187999:1
position: 187999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187712-187999:1:exon

SD1D_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: yabP
locus tag: SD1D_RS00910
old locus tag: SD1D_0186
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004846047.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sporulation protein YabP
translation: MEERQEILKGHKLHINARKTATITGVNDVLSFDAGEVLLQTEQGILLIRGSELHVNRLTLEKGEVDIDGKIDSITYSDSTSYGKSGESLLGRLFK
SIO_010081: SD1D_RS00910
subclass of: SO_0000673
so part of: SD1D_RS00910
location: 187712..187999
location: region:187712-187999:1
so has part: feature:187712-187999:1:exon

WP_058257186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187712-187999:1:exon

SD1D_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00915
old locus tag: SD1D_0187
so part of: sequence
location: 188009..188569
location: region:188009-188569:1
so has part: feature:188009-188569:1:exon
subclass of: SO_0000010

position:188009:1
position: 188009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188569:1
position: 188569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188009-188569:1:exon

SD1D_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00915
old locus tag: SD1D_0187
inference: COORDINATES: protein motif:HMM:NF021118.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore cortex biosynthesis protein YabQ
translation: MSQEIIIELQFFWVSILWGALILLAYDQLRVIRRIISHNNIFITIQDMIFWILASIFIFAMLYVKNDGIIRGFSVMGMVIGMVLYHYILSDLIVMLISRGILLLLRPLSITIKYIRKGGSFLLKKGKNFLKIILKRLKKILESVKIYLTKYKQKSNNKKAKIHHKNHKKKKSKKKQVPKNRDKNKR
SIO_010081: SD1D_RS00915
subclass of: SO_0000673
so part of: SD1D_RS00915
location: 188009..188569
location: region:188009-188569:1
so has part: feature:188009-188569:1:exon

WP_058257187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188009-188569:1:exon

SD1D_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00920
old locus tag: SD1D_0188
so part of: sequence
location: 188591..188881
location: region:188591-188881:1
so has part: feature:188591-188881:1:exon
subclass of: SO_0000010

position:188591:1
position: 188591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188881:1
position: 188881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188591-188881:1:exon

SD1D_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00920
old locus tag: SD1D_0188
inference: COORDINATES: protein motif:HMM:NF016839.2
GO process: GO:0051301 - cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum formation initiator family protein
translation: MRGRNKKGNGTGIIVFVVLCIFGIVAFGKINLQDRKKELDLMMNSLEKQISDEEERKIDIKNLEAYVQTKGYIEEVARDQLGLVYEDEIIFKEDDN
SIO_010081: SD1D_RS00920
subclass of: SO_0000673
so part of: SD1D_RS00920
location: 188591..188881
location: region:188591-188881:1
so has part: feature:188591-188881:1:exon

WP_058257188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188591-188881:1:exon

SD1D_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00925
old locus tag: SD1D_0189
so part of: sequence
location: 188961..189034
location: region:188961-189034:1
so has part: feature:188961-189034:1:exon
subclass of: SO_0000663

position:188961:1
position: 188961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189034:1
position: 189034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188961-189034:1:exon

SD1D_RS00925
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS00925
old locus tag: SD1D_0189
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:188995..188997,aa:Met,seq:cat)
SIO_010081: SD1D_RS00925
subclass of: SO_0000673
so part of: SD1D_RS00925
location: 188961..189034
location: region:188961-189034:1
so has part: feature:188961-189034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188961-189034:1:exon

SD1D_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: spoIIE
locus tag: SD1D_RS00930
old locus tag: SD1D_0190
so part of: sequence
location: 189274..191562
location: region:189274-191562:1
so has part: feature:189274-191562:1:exon
subclass of: SO_0000010

position:189274:1
position: 189274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191562:1
position: 191562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189274-191562:1:exon

SD1D_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: spoIIE
locus tag: SD1D_RS00930
old locus tag: SD1D_0190
EC number: 3.1.3.16
inference: COORDINATES: protein motif:HMM:TIGR02865.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage II sporulation protein E
translation: MKNIRKNAILIYVIGFVIARATFLGINPLAIGYFTAAYLDKARPGLLFITILAGIGSAMAPTMVLKYLLSMISSVVLLESPYLKKRELPLQLYFYIPAITLGIFAMMEAGAYGWDPKMIFMAILEAIIAYVSGMIFSLGTGFFLKQPKGMKMTNEEMISLSLMVAVLIYALPEVSSPYIAPIETVVYFVILLFTYKYGVGQGAVTGAVSGFALSLRGAPIHIISLLTMMGIVPALFRSIGRIPTAAVFSLTSAIISLLYGEIAVSSREIAALSSALLLFLLLPKTIIYRVDNDKNGIGQSLMSLDNLKKLANNRMKTFSESFLKLSKTLESIAEGQEKNIQKEIDAIFEDISERLCKNCKNCSFCWENNFQEAYNAACNMFDVAQKKGYIEEKDIPQYFLDYCICAHELVLETNRGFEIAKINNLWANRLAESREVIAGQLKEVSNAINTLTGDIYKAARVMENDESKVIKKLGAHNIDVKNIIILERGGRRKELIINAAVGRNHFITTKEAAAWISEALGMKFAVSEISKSVFSKEYEEYCFVEDTKFKVLTGVARAMKENISGDNFSIINLDNGEMVIALSDGMGTGKEACEESETVLSLLEQFLEAGFKIETAIRMINSNLVLKPEKQAFSTIDMGTINLYTAMCEFVKIGAASTFIKRNNWVETISSTTLPIGMLKVVDYDSVTKKLYEGDIIIMVSDGVLDCLNEDNKEAYMEKLIMNIQSNNPQEIANRILDHALSQSNYIPMDDITVITAGIWLK
SIO_010081: SD1D_RS00930
subclass of: SO_0000673
so part of: SD1D_RS00930
location: 189274..191562
location: region:189274-191562:1
so has part: feature:189274-191562:1:exon

WP_058257189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189274-191562:1:exon

SD1D_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: tilS
locus tag: SD1D_RS00935
old locus tag: SD1D_0191
so part of: sequence
location: 191654..193102
location: region:191654-193102:1
so has part: feature:191654-193102:1:exon
subclass of: SO_0000010

position:191654:1
position: 191654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193102:1
position: 193102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191654-193102:1:exon

SD1D_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: tilS
locus tag: SD1D_RS00935
old locus tag: SD1D_0191
EC number: 6.3.4.19
inference: COORDINATES: protein motif:HMM:TIGR02432.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MLEKVHGYIKSYNLIEKGDRILIAVSGGADSVCLLHILSDLYRDSDVSLYAVHVHHGIRDEEADRDEAFVKSLCDRLKITFTSYHFDVRAIAKKEGLSEEEAGRKVRYETFLSASIKNRCNKVAIAHNKNDNAETILFNLFRGTGIKGLTGIDPKLTMKTDTGNITIIRPILFVTRKEIEDYLSQHGLHYQVDSTNMQNIYTRNKIRHRILDYVVNEINKNAIEHITNAANHLKEADNFIEKYTKDRYTAIVKEYENFFEYDVKDFSFEDIVIQKGIVRKILGSLAGRLKDIEAKHVDEVLALGKKEVGRQIHLPYGIIAVKTYDTIKIYLTNSQKKCKDITFKPVDIKIPGKTYLEAYKLYFETEIKNYKKNEPIPKNSCMKWFDYDKIENTLKLRTRKAGDYLQINSQGGRKKLKEYFIDSKIPKEERDQILLLVDGSHVVWIIGHGNRISEKYKIKDQTKKILSIKLNFDDINNCKGEE
SIO_010081: SD1D_RS00935
subclass of: SO_0000673
so part of: SD1D_RS00935
location: 191654..193102
location: region:191654-193102:1
so has part: feature:191654-193102:1:exon

WP_058257190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191654-193102:1:exon

SD1D_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: hpt
locus tag: SD1D_RS00940
old locus tag: SD1D_0192
so part of: sequence
location: 193102..193617
location: region:193102-193617:1
so has part: feature:193102-193617:1:exon
subclass of: SO_0000010

position:193617:1
position: 193617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193102-193617:1:exon

SD1D_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: hpt
locus tag: SD1D_RS00940
old locus tag: SD1D_0192
EC number: 2.4.2.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004221063.1
GO process: GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypoxanthine phosphoribosyltransferase
translation: MTENIKVMISEEEVQKRIEELADQISKDYEGKSVHLICILKGSVFFSCDLAKRITVPVTIDFMSVSSYGNELVSSGRVRIVKDLDESIQDKDVLIIEDIIDSGRTLAYLVELLSARSPRSLNICTLLDKPERRVTDVKVKYVGFEIPDEFVVGYGLDYQQNLRNLPYIGVI
SIO_010081: SD1D_RS00940
subclass of: SO_0000673
so part of: SD1D_RS00940
location: 193102..193617
location: region:193102-193617:1
so has part: feature:193102-193617:1:exon

WP_058257191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193102-193617:1:exon

SD1D_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: ftsH
locus tag: SD1D_RS00945
old locus tag: SD1D_0193
so part of: sequence
location: 193690..195516
location: region:193690-195516:1
so has part: feature:193690-195516:1:exon
subclass of: SO_0000010

position:193690:1
position: 193690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195516:1
position: 195516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193690-195516:1:exon

SD1D_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: ftsH
locus tag: SD1D_RS00945
old locus tag: SD1D_0193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013977118.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MKGYGFYLVILAIVFMTVFLSDSFESYNQNAYNRSQFISDLEQGRIAYVDIYPNQEVYTGKVKVKFTDQDQRASFYASDIREIESLLIDADIKYDMHDISKPNWFLSTVLPYVLVFIVVIALFSFLSNQASVGGGNNKVMNFGKSRAKMTTGDNKTTTFKNVAGLDEEKDELKEIVDFLKSPKKYIQVGARIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEEAKKNSPCIVFIDEIDAVARRRGTGMGGGHDEREQTLNQLLVEMDGFGVNEGIIVMAATNRVDILDPAILRPGRFDRKVTVGRPDVKGREEILQVHAKGKPLGDDVDLKQIAQTTAGFTGADLENLMNESAIGAARENRTYITSEDVKKAFIKVGIGTEKKSKVISEKEKLITAYHEAGHAILFHVLPDVGPVYTVSIIPTGTGAAGFTMPLPEKDEMFLTKGRMRQDIIVGLGGRAAEELVFDDITTGASQDIKVATKTARAMITRYGFSETVGLVNYEQSEEEVFIGRDWGHTRNYSENVANKIDEEVRSIIDECYAEAKRILTEHRDILDACANLLIEKERISREEFEALFEAKKEETL
SIO_010081: SD1D_RS00945
subclass of: SO_0000673
so part of: SD1D_RS00945
location: 193690..195516
location: region:193690-195516:1
so has part: feature:193690-195516:1:exon

WP_058259150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193690-195516:1:exon

SD1D_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00950
old locus tag: SD1D_0194
so part of: sequence
location: 195892..196320
location: region:195892-196320:1
so has part: feature:195892-196320:1:exon
subclass of: SO_0000010

position:195892:1
position: 195892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196320:1
position: 196320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195892-196320:1:exon

SD1D_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00950
old locus tag: SD1D_0194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015530236.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLRYNKTLKYTLLFLIGGFAYGGIEIMFRGYSHISMLAAGGICFILIGLINEIFSWDIAFLSQMVISSVIITVVEFIFGLVVNIWMGLNVWDYSNQPYNIMGQTCILFSIIWFFLSPLAILLDDYLRYYLLGEEKPRYKLF
SIO_010081: SD1D_RS00950
subclass of: SO_0000673
so part of: SD1D_RS00950
location: 195892..196320
location: region:195892-196320:1
so has part: feature:195892-196320:1:exon

WP_058257192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195892-196320:1:exon

SD1D_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00955
old locus tag: SD1D_0195
so part of: sequence
location: complement(196326..197216)
location: region:196326-197216:-1
so has part: feature:196326-197216:-1:exon
subclass of: SO_0000010

position:196326:-1
position: 196326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197216:-1
position: 197216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196326-197216:-1:exon

SD1D_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00955
old locus tag: SD1D_0195
inference: COORDINATES: protein motif:HMM:NF021445.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidylglycerol lysyltransferase domain-containing protein
translation: MLSFKPINADNILETSKFFKYKISRTSDYTIGAMYMWRDFYNTQYTIYDDMILYKVKFLDRTSFTFPVGSGSLDKVMTALKSYCRKQDIPLWFCTVPEEAIPILVNQYNGTIPDEPSRDWADYLYLAEDLSNMAGRRYSGQRNHINRFKKLYPNYSYEKITEDNMDRVIKFLQDYQVDFNKGSNLAKEELKRSMELLPYLNKFNLIGGFIQVDETIVAMAVGEVINDTLYCHIEKAKRQYHGSYQMIVKEFSKNAITEQVKYINREEDVGDMGLRTSKLSYHPHKLLDKYCVLLPT
SIO_010081: SD1D_RS00955
subclass of: SO_0000673
so part of: SD1D_RS00955
location: complement(196326..197216)
location: region:196326-197216:-1
so has part: feature:196326-197216:-1:exon

WP_058257193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196326-197216:-1:exon

SD1D_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00960
old locus tag: SD1D_0196
so part of: sequence
location: 197352..199097
location: region:197352-199097:1
so has part: feature:197352-199097:1:exon
subclass of: SO_0000010

position:197352:1
position: 197352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199097:1
position: 199097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197352-199097:1:exon

SD1D_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00960
old locus tag: SD1D_0196
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019160984.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: B12-binding domain-containing radical SAM protein
translation: MKILLVAVDAKYIHTNLAVHSLKAYSEIYGDHINIAQFSINHSKDDILRGIYLEQADVVAFSCYIWNIGLILRVIKSLRKIQPQVKIWFGGPEVSYYPKEYLLKYQELDGIVIGEGEETFYELTQYYLNEGRSLDSIDGIAYKDSAKLQLLNESLSNGITITSPRKSMALDKLPFAYENMESHKNKIIYYESSRGCPYSCSYCLSSANRGVRLRNLDLVKKELKIFLDNMVPQVKFVDRTFNCNKSHAMEIWRFIKENDNGITNFHFEITADLLSQEELKLLESLRPGLIQLEIGVQTTNPDTMKAIKRTVDFKTLSENVKRIKKAHNIHQHLDLIAGLPLEDFASFEKSFNDVYGLKPDQLQLGFLKVLKGSIIEKDCKEYGIVYNDEAPYEVLYTNHLSYDEILELKGICDMVEVYYNSGQFAYSMEYLEHFFDSPMKLYQSLYHYYHKKGLYTLAHSRMRRYEILLDFFKDLIASNKEKSSLEWEVFKEIILFDLCLREGLKNRPDYFGPPIEYHKYRKICDEQKASRARTHLEKFNYDVISCARTGKAIKKNHIILFDYGSRDPLNNSAKIKILLDE
SIO_010081: SD1D_RS00960
subclass of: SO_0000673
so part of: SD1D_RS00960
location: 197352..199097
location: region:197352-199097:1
so has part: feature:197352-199097:1:exon

WP_058257194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197352-199097:1:exon

SD1D_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: nth
locus tag: SD1D_RS00965
old locus tag: SD1D_0197
so part of: sequence
location: 199153..199869
location: region:199153-199869:1
so has part: feature:199153-199869:1:exon
subclass of: SO_0000010

position:199153:1
position: 199153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199869:1
position: 199869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199153-199869:1:exon

SD1D_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: nth
locus tag: SD1D_RS00965
old locus tag: SD1D_0197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009247179.1
GO function: GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease III
translation: MSGVRISKKEKERIENIISELNRVYGTENRCFLHHETPWQLLIATILSAQCTDDRVNQVTETLFKKYPRLEDFANANQKELEKDIHSTGFYKNKAKNIIACAQRLIKVYDGIVPKDIEDLVSLAGVGRKTANVIRGNIYNEPSIVVDTHVKRVSKRLGLTKEEDPVKIEFDLMKKLPTKQWIPYNIQIITHGRSICSARNPKCEQCFLKEFCTYGKKYKETLSKQEKQRKNPLIEGVK
SIO_010081: SD1D_RS00965
subclass of: SO_0000673
so part of: SD1D_RS00965
location: 199153..199869
location: region:199153-199869:1
so has part: feature:199153-199869:1:exon

WP_058257195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199153-199869:1:exon

SD1D_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00970
old locus tag: SD1D_0198
so part of: sequence
location: complement(199910..200524)
location: region:199910-200524:-1
so has part: feature:199910-200524:-1:exon
subclass of: SO_0000010

position:199910:-1
position: 199910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200524:-1
position: 200524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199910-200524:-1:exon

SD1D_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00970
old locus tag: SD1D_0198
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEPFVSLSIVIIFVLWLNYEIFKSNRLSKKSRQEFLKKESQANQTRKVDISHLNYIQIPYDKLPMKDHDDATINSYRDIILSQSDKKILNLSGLSNTELKLKYGAANINLLAEYDNNFTVLVSILQKWGERLYQQGYYKEALAVLETAIDCKTDVRKTYELLARIYLEQGSPDKINELIKLIPTTGVRNQDELISKLLTLKNLD
SIO_010081: SD1D_RS00970
subclass of: SO_0000673
so part of: SD1D_RS00970
location: complement(199910..200524)
location: region:199910-200524:-1
so has part: feature:199910-200524:-1:exon

WP_157893077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199910-200524:-1:exon

SD1D_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00975
old locus tag: SD1D_0200
so part of: sequence
location: 200840..202396
location: region:200840-202396:1
so has part: feature:200840-202396:1:exon
subclass of: SO_0000010

position:200840:1
position: 200840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202396:1
position: 202396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200840-202396:1:exon

SD1D_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00975
old locus tag: SD1D_0200
inference: COORDINATES: protein motif:HMM:NF016202.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VanW family protein
translation: MGKKFMFFYTVIALSVFMLFTGKTSNVYAAEDPTITKGVFIDEVDVSGMTAKEAEEAIDKYFNELKKKQLTVMVDNSRVTTTLDELGYSYKINGVIEEALKIGTSGNLIKRYKEMKDIAHGGIKYPLEYSLDENKVREFVSVKVSEYNVEPVNASVYRNEGKLIYTNHVPGKQVNVEPTVLNILDKIKNSWDRNDITIEAYIQNVDPIYTRDIVEKCNTILGSFTTEYANSAEGRAANLANGAKLINNTVLYPGDIFSGYEHLAPFTEENGYFSAGAYSAGKVIDSIGGGACQVTTTLYNAVLEAELEIVERHAHSMTISYVDLSRDAAIAGTYKDLKFKNNTDVPILIEAYTKGRKITFNIWGCETRDTTNRKIKFETKVLSKTAPPADVIEKDPTKPETYKKVTQSAHTGYRTELYKVVYENGVEVDRILINKSYYSPAPRYITIGTKKVEVAPPKDKTDKNKDTSKEDKDKKPDKKDDSQKEEEKTQDNIENTQTQFEENINWNPEWDEEGFEDE
SIO_010081: SD1D_RS00975
subclass of: SO_0000673
so part of: SD1D_RS00975
location: 200840..202396
location: region:200840-202396:1
so has part: feature:200840-202396:1:exon

WP_058257197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200840-202396:1:exon

SD1D_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00980
old locus tag: SD1D_0201
so part of: sequence
location: 202417..203400
location: region:202417-203400:1
so has part: feature:202417-203400:1:exon
subclass of: SO_0000010

position:202417:1
position: 202417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203400:1
position: 203400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202417-203400:1:exon

SD1D_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00980
old locus tag: SD1D_0201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004054684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AIR synthase family protein
translation: MKIGKIHETILKRSVLNQIKHRRDEVLLGPAIGKNCSIIDLNGEDLLAVSTNPLKDIMNNTGILAVHKTVNNIASSGAEPIGITLSILLPEDTEESSLKVLIHDVDMVCKELNIEVFGVEAEVTKVVIKPVLTVTGVGRLKKSDIEKGLAAIPGQEIVMTKWVGLEGTAILAKAKEEELLSRYSAAFINGAKSMLDYISVLPEVKIANQVGVTSMHNVTEGGIFGALWELGAAFKVGLEVDLQKILLKQETVEICEYFDLNPYMLISGGCLLMVTDKANFLVESLREEGIEAAVIGRIKEGNDRLVKNNDELRFLEPSQSDELYKVI
SIO_010081: SD1D_RS00980
subclass of: SO_0000673
so part of: SD1D_RS00980
location: 202417..203400
location: region:202417-203400:1
so has part: feature:202417-203400:1:exon

WP_058257198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202417-203400:1:exon

SD1D_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00985
old locus tag: SD1D_0202
so part of: sequence
location: 203477..203959
location: region:203477-203959:1
so has part: feature:203477-203959:1:exon
subclass of: SO_0000010

position:203477:1
position: 203477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203959:1
position: 203959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203477-203959:1:exon

SD1D_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00985
old locus tag: SD1D_0202
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013271088.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC family transcriptional regulator
translation: MREKILTAIDKNSKLTAKDLAIMLGSTEEEVTSILKQLEEEHIICGYPTLINWDKVQCERVTALIEVKVTPQRGLGFDKIAERIYKFDEVQSVYLMSGGFDLTVIIEGKTMREVANFVAAKLAPMDAILSTATHFVLKKYKEHGLPLVEPKQDERMLISP
SIO_010081: SD1D_RS00985
subclass of: SO_0000673
so part of: SD1D_RS00985
location: 203477..203959
location: region:203477-203959:1
so has part: feature:203477-203959:1:exon

WP_058257199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203477-203959:1:exon

SD1D_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00990
old locus tag: SD1D_0203
so part of: sequence
location: 203956..205116
location: region:203956-205116:1
so has part: feature:203956-205116:1:exon
subclass of: SO_0000010

position:203956:1
position: 203956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205116:1
position: 205116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203956-205116:1:exon

SD1D_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00990
old locus tag: SD1D_0203
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198182.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
translation: MRNPLSRNVVNIQPSGIRKFFDIVSEMKDAISLGVGEPDFDTPWHIREEGIYSLEKGRTFYTSNSGLKELKIEICNYLYRRCDLQYNYSNEVLVTVGGSEAIDLALRAMVDPGDEVLVPQPSYVSYHPCALLAGAVPVVIELKEENNFKLTKQDLLSAITDKTKILILPFPNNPTGAIMDYDDLKDIVDIIIEKDLYVISDEIYSELTYGKRHVSIASFPGMRDRTIVINGFSKSYAMTGWRLGYAAGPALIIEQMTKIHQFAIMCAPTTSQYAAVEALRNGDSDVEMMRDAYDKRRKYLVHAIRNMGLSCFEPLGAFYVFPSIKGLNMSSDDFATRLLQEEKVAVVPGTAFGACGEGFLRISYAYSIDNLKVALERIERFVKKHK
SIO_010081: SD1D_RS00990
subclass of: SO_0000673
so part of: SD1D_RS00990
location: 203956..205116
location: region:203956-205116:1
so has part: feature:203956-205116:1:exon

WP_058257200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203956-205116:1:exon

SD1D_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS00995
old locus tag: SD1D_0204
so part of: sequence
location: 205175..205645
location: region:205175-205645:1
so has part: feature:205175-205645:1:exon
subclass of: SO_0000010

position:205175:1
position: 205175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205645:1
position: 205645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205175-205645:1:exon

SD1D_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS00995
old locus tag: SD1D_0204
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012740078.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheX
translation: MAALNVDHINPFLLATSKILKEMCFIEPKMDKPSIKEAVFLDNTLLIIIGFTGKIKGQVIIAFEHNTACDIASKMIMMPVTEMDDFAVSAISELGNMILGNAATIFSTQGIDMDITPPTIGKGTMSFSHSYSKNICIPFIYDGDKRIEVNIAIKGL
SIO_010081: SD1D_RS00995
subclass of: SO_0000673
so part of: SD1D_RS00995
location: 205175..205645
location: region:205175-205645:1
so has part: feature:205175-205645:1:exon

WP_058257201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205175-205645:1:exon

SD1D_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: trmL
locus tag: SD1D_RS01000
old locus tag: SD1D_0205
so part of: sequence
location: 205710..206213
location: region:205710-206213:1
so has part: feature:205710-206213:1:exon
subclass of: SO_0000010

position:205710:1
position: 205710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206213:1
position: 206213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205710-206213:1:exon

SD1D_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: trmL
locus tag: SD1D_RS01000
old locus tag: SD1D_0205
EC number: 2.1.1.207
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004843744.1
GO function: GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL
translation: MMNIVLLEPEIPANTGNIGRTCVATNTKLHLIEPLGFSLNEKQLKRAGLDYWHKLDLRVYDDFDDFLEKNNYPKIYMATTKAVRSYTQVKYDKDCFIMFGKESSGIPEELLLANKENCIRIPMVGDIRSLNLGNSVAIILYEALRQNNFETMQMEGNLHYHNWDDQL
SIO_010081: SD1D_RS01000
subclass of: SO_0000673
so part of: SD1D_RS01000
location: 205710..206213
location: region:205710-206213:1
so has part: feature:205710-206213:1:exon

WP_058259151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205710-206213:1:exon

SD1D_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01005
old locus tag: SD1D_0206
so part of: sequence
location: complement(206227..207639)
location: region:206227-207639:-1
so has part: feature:206227-207639:-1:exon
subclass of: SO_0000010

position:206227:-1
position: 206227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207639:-1
position: 207639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206227-207639:-1:exon

SD1D_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01005
old locus tag: SD1D_0206
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016285767.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MKKTLWLRLILCYLISVVMVFILVNTYGMTLLKNKLKKDQINLLYKEASLIANAYRGNIFVENNLDDDLASQFKSIDTYLNIRVWIVNREGRIIADSSNVNNPLDINLNDLDPQFLNKTLSENTMFKNIFREPMLSVIYRVDYNFRLRGYIVLHSPMSEIQDRANMYLDVINICFLIFFPLLFLIFIYIYYITARPLKKLMKAAMEYSSGNYTYKLNIKGPNEYRDLGAAISYMAEEISMLDDYQKKFVANISHDFRSPLTSIKGYAEAILDGTIPTDMQDRYLNIILFETERLNKLTSSLLELNRFESRSALLDIVSFDINLVIKKTAESFEGACRSKKITLNLVFSSTETYVDADMSKIQQVLYNLIDNAIKFSHNNSKIKVSTEEKGEKVFVSVKDYGIGIPKDSIKKIWDRFYKTDASRGKDKKGTGLGLSITKEIIQAHNENINVVSTEGVGTEFIFSLPKTAGY
SIO_010081: SD1D_RS01005
subclass of: SO_0000673
so part of: SD1D_RS01005
location: complement(206227..207639)
location: region:206227-207639:-1
so has part: feature:206227-207639:-1:exon

WP_058257202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206227-207639:-1:exon

SD1D_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01010
old locus tag: SD1D_0207
so part of: sequence
location: complement(207679..208392)
location: region:207679-208392:-1
so has part: feature:207679-208392:-1:exon
subclass of: SO_0000010

position:207679:-1
position: 207679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208392:-1
position: 208392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207679-208392:-1:exon

SD1D_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01010
old locus tag: SD1D_0207
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015524367.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MLKQKILIVDDDVNIAELISLYLTKECFDTKIVHDGEAAIEEFNSYQPNLILLDLMLPGIDGYEVCREIRKTSKIPIIMLSAKGEVFDKVLGLELGADDYIIKPFDSKELVARVRAVLRRFNPNVEEKADDTPKGKFVQYPDLIINLSNYSVQYYGKNIEMPPKELELFYFLASNPNQVFTREQLLDHIWGYEYYGDTRTVDVHIKRLREKIKDHSNWSLATVWGIGYKFEVKNTKK
SIO_010081: SD1D_RS01010
subclass of: SO_0000673
so part of: SD1D_RS01010
location: complement(207679..208392)
location: region:207679-208392:-1
so has part: feature:207679-208392:-1:exon

WP_058257203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207679-208392:-1:exon

SD1D_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01015
old locus tag: SD1D_0208
so part of: sequence
location: complement(208417..210792)
location: region:208417-210792:-1
so has part: feature:208417-210792:-1:exon
subclass of: SO_0000010

position:208417:-1
position: 208417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210792:-1
position: 210792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208417-210792:-1:exon

SD1D_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01015
old locus tag: SD1D_0208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003509752.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease MutS2
translation: MNEKALRTLEYNKIIQQLRDLASSSRGKELCTNLLPKDNLGDITRLQKETSDALSRLIRRGSISFSGIHDIRPSLMRLKVGSALNAVELLRISSDLDATLRIKAYGGYSGKDGEEETEDSLTEYFAGLEPLTPFNNEIKRCIISEEEIADDASSTLKNIRRSIRLTHEKIQSQLSSILNSSRNLLQESIVTMRNGRYCLPVRAEFKNQFQGMIHDQSSSGSTLFIEPMAIVRLNNDLRELGIAEQEEIERILATLSEMAAQYIDELEYNYNTLTELDFIFARANLSRQMKGTEPIFNEDGIINLKKARHPLIDPKHVVPIDVRIGQDFSMLIITGPNTGGKTVTLKTVGLLTLMGQAGLHIPAFDNSMLAIFKEVYADIGDEQSIEQSLSTFSSHMTNIVSILQNANEDSLVLFDELGAGTDPTEGAALAMSILTYLHNRNIRTLATTHYSELKVYALSTEGVMNASCEFNVETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKLRIGKQDRTFEDLISDLEASRITIEKEQEEISKYKAEIEKLKKNLDRKNESLEANRERIIREAKEEAAKILQEAKDFADESIRKYNRWLQEGGEIKEMESARSQIRDRINKDVSLPKIKKKPSKKISPENIKVGDSVFVVPLGLKGTVSTLPNSKGDLFVQMGILRSQVNIKDLEPAEAEDKKPEISNRTQSGKIRMSKSASIKPEINLIGKTVDEAIFELEKYLDDAYLAHLPQVTVIHGRGTGALRNAVHTYLKKSKYVKDFRIGGYNEGNTGATIVEFK
SIO_010081: SD1D_RS01015
subclass of: SO_0000673
so part of: SD1D_RS01015
location: complement(208417..210792)
location: region:208417-210792:-1
so has part: feature:208417-210792:-1:exon

WP_058259152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208417-210792:-1:exon

SD1D_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01020
old locus tag: SD1D_0209
so part of: sequence
location: 211065..212429
location: region:211065-212429:1
so has part: feature:211065-212429:1:exon
subclass of: SO_0000010

position:211065:1
position: 211065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212429:1
position: 212429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211065-212429:1:exon

SD1D_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01020
old locus tag: SD1D_0209
EC number: 3.4.21.-
inference: COORDINATES: protein motif:HMM:NF024758.2
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S1C family serine protease
translation: MSETNKDHEEFEFIKEQILPKRHKKFKKWLIPFVMTILMAVVFGLVAALTFCFAEPRLYKRMHGDKENPFTIPSSPIPDKKDDKNSSNDNKVDNKDHDGNKNSSENDTEDPDGPVADPDDNQSQVIYKSIDADIEDYVTILSEIKELSNEAARSILTVSCIVEDKDWFDNPIEKKVNTSGIVVKNNGTSLLLLVSLDRVKEANSIKVEISESTSVEAVLHDYESELNLAILAVNAADIPARLLGDIKVANLGESYALTVGSPIIALGNPNGYISSMDIGIITSKGSTISITDNELDLFNTNMTFTKDSDGVIVNFKGEVIGLITRTLKQNINKELSTVLGITRVKPYIERMVNQKSRIYCGIVAENLPESVMLEHNVKSGIYVYEVKTDSPAFNAGIRSGDIILGVGDGFISNMNNFYRVINEYEPGTEVVFKVKRSNTDKEIELKVVIAEKKQ
SIO_010081: SD1D_RS01020
subclass of: SO_0000673
so part of: SD1D_RS01020
location: 211065..212429
location: region:211065-212429:1
so has part: feature:211065-212429:1:exon

WP_058257204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211065-212429:1:exon

SD1D_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01025
old locus tag: SD1D_0210
so part of: sequence
location: 212576..213529
location: region:212576-213529:1
so has part: feature:212576-213529:1:exon
subclass of: SO_0000010

position:212576:1
position: 212576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213529:1
position: 213529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212576-213529:1:exon

SD1D_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01025
old locus tag: SD1D_0210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005541381.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MKYIRDLREGDIIKNEIYLCKSKQVLRGKSGKEYVSLILQDKTGTIDGKIWDFNCEIGQYEAMDFVHIDARVTSFQDALQLNISKIYKSREGEYYPEDYFPKTNKDVEEMYKQIKDYIFSIKESNLRSLIESFFINDKDFIKKFKEHSAAKSVHHSFMGGLLEHTLSVVNMCNFYAQNYQIINRDLLISAALLHDIGKMDELSAFPRNDYTDEGQLLGHIFIGSNKVQERIKEIKNFPNKLASELIHCILAHHGELEYGSPKKPATIEAMALHFADNTDAKLQTMTELLNSCDDKVEWMGYQRMFESNIMRSTKGIE
SIO_010081: SD1D_RS01025
subclass of: SO_0000673
so part of: SD1D_RS01025
location: 212576..213529
location: region:212576-213529:1
so has part: feature:212576-213529:1:exon

WP_058257205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212576-213529:1:exon

SD1D_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rlmD
locus tag: SD1D_RS01030
old locus tag: SD1D_0211
so part of: sequence
location: 213638..215014
location: region:213638-215014:1
so has part: feature:213638-215014:1:exon
subclass of: SO_0000010

position:213638:1
position: 213638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215014:1
position: 215014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213638-215014:1:exon

SD1D_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rlmD
locus tag: SD1D_RS01030
old locus tag: SD1D_0211
EC number: 2.1.1.190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005361995.1
GO function: GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
translation: MVKKNDQLIVTIEDIGANGEGIGKYQGYTLFIKNTAVGDKVLVKVMKAGKSYGYARLMEIIEPSAFRVSPICPIAGKCGGCQIMHLDYEKQLEYKEDKVRNCLTKIGGFDKITMEPIVGMDYPYYYRNKSQFPVGKNKEGKVVIGFYASRTHSIIDTDHCYIGADVNIKIIKFMRSFTEKYNIEPYDEVKHTGLLRHILTRMGYKTGEVMVCLVINGKDIPHKNKLVEGLRKIPGMKSICLNINTSNTNVILGEKVIKVWGETYIEDYIGKVKYRISPLSFFQVNPIQTEKLYNLALEYADLQGDEVVWDLYCGIGTISLFLAEKAKKVYGVEIIPQAIEDAKVNARINGIDNAEFYVGAAEEILPKKHKEENISADVIVVDPPRKGCDQKLLDTIISIAPKKVVYVSCDPATLARDLKYLHEGGYELKKVRPVDQFGHSVHVETVVLMCASSEAGKC
SIO_010081: SD1D_RS01030
subclass of: SO_0000673
so part of: SD1D_RS01030
location: 213638..215014
location: region:213638-215014:1
so has part: feature:213638-215014:1:exon

WP_058257206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213638-215014:1:exon

SD1D_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: ltrA
locus tag: SD1D_RS01035
old locus tag: SD1D_0212
so part of: sequence
location: 215493..216791
location: region:215493-216791:1
so has part: feature:215493-216791:1:exon
subclass of: SO_0000010

position:215493:1
position: 215493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216791:1
position: 216791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215493-216791:1:exon

SD1D_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: ltrA
locus tag: SD1D_RS01035
old locus tag: SD1D_0212
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014256637.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MIANKAINTHEKVRNLQNRLYLTAKADRKRKFYALYDKIYRNDILEEAWKRVKQNGGTGGIDKVSIDDVKTYGEEKLLGEIAEELRTGKYRCKPVRRSYIPKPDGRKRALGIPTIKDRIVQMAAKIVIEPVFEADFQPCSYGFRPKRSAKQAMDRIFEVSDKGGALWVIDADIKDYFGSINHDKLLLLVKQRITDRRVLKLIKGWLKAGVLENGRYSESTLGAPQGGVISPLLSNIYLNYFDVYWNKAFGHLGELVRYADDFVILCKRLSHAEEAFRAVKWIMGKLELTLHSEKTRLVDMYFGKDSFDFLGFNNRFQRFRNKNWQWYWTLQQIPSKKAMKKMRANIKEVFASPSKLLLSMEEMVKLLNPKIIGMRNYYTRRFTRPWLWKIDKYINFKFTRWYNRKKQRNYRLGNAAKVRELTKQAGLASMCG
SIO_010081: SD1D_RS01035
subclass of: SO_0000673
so part of: SD1D_RS01035
location: 215493..216791
location: region:215493-216791:1
so has part: feature:215493-216791:1:exon

WP_058257207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215493-216791:1:exon

SD1D_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01040
old locus tag: SD1D_0213
so part of: sequence
location: 217248..217457
location: region:217248-217457:1
so has part: feature:217248-217457:1:exon
subclass of: SO_0000010

position:217248:1
position: 217248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217457:1
position: 217457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217248-217457:1:exon

SD1D_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01040
old locus tag: SD1D_0213
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019163073.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MAISYKKLWKLLIDRDMKKKDLQKLAGISSATITKLGKNENVSTEIIQKICIALECDVCDIMEMDTKRN
SIO_010081: SD1D_RS01040
subclass of: SO_0000673
so part of: SD1D_RS01040
location: 217248..217457
location: region:217248-217457:1
so has part: feature:217248-217457:1:exon

WP_058259153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217248-217457:1:exon

SD1D_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01045
old locus tag: SD1D_0214
so part of: sequence
location: 217423..218397
location: region:217423-218397:1
so has part: feature:217423-218397:1:exon
subclass of: SO_0000010

position:217423:1
position: 217423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218397:1
position: 218397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217423-218397:1:exon

SD1D_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01045
old locus tag: SD1D_0214
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MISWKWIPNGISIYYCLPEKARYDYLLNLPDDADCGKAVNEAMELIEAESTQLKGILPKTYTSFRNDLLKELLRIFNNSALNEINDDILGRIYEYFLNKFASAIASDDGVFFTPKSLVKMIVNIIEPTQGIVLDPACGSGGMFVSSSDFVNSEGINANSAMTFYGQEKVEFNAKLCIMNMAVHGLNAKIKSGDEANSFYHDAHNLEGRCDYVMANPPFNVDKVKAESTQNAGRLPFGLPGVNQKKEVSNANYLWISYFYAYLNDTGRAGFVMAASATDSGNKDREIRKQLIQTGHVDCLMSVANQFYHGLLGKMEEIMLGIGQD
SIO_010081: SD1D_RS01045
subclass of: SO_0000673
so part of: SD1D_RS01045
location: 217423..218397
location: region:217423-218397:1
so has part: feature:217423-218397:1:exon

WP_242955230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217423-218397:1:exon

SD1D_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: istA
locus tag: SD1D_RS01050
old locus tag: SD1D_0215
so part of: sequence
location: 218788..219963
location: region:218788-219963:1
so has part: feature:218788-219963:1:exon
subclass of: SO_0000010

position:218788:1
position: 218788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219963:1
position: 219963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218788-219963:1:exon

SD1D_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: istA
locus tag: SD1D_RS01050
old locus tag: SD1D_0215
inference: COORDINATES: protein motif:HMM:NF033546.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MIGIEQYQKIQEYKELGLAQTKTAKALGLTYTSVSKYWNMSKEDYAREAEQEKYHMDNYRQYILEQLKICPQIRDTNIYLKLMEDFPDLQVKRATFYRYMKALREQHGYQHTSKRKISPREVSPPGYEAQADFGQYKLKDMYGRIVRVYFFCMVLSYSRMKFVCFSPDPFTTETAIKAHNYAFQYFGGRPQTILYDLDRVYVVSENLGNIIFVPAFEEYVKRIGYSVSLCRPRDPQSKGKVEEVIGYVKQSFLEGRVYTGIDSLNSAALAWLDREGNGRVHTVTRKVPREMFIEEQKQLFHVKPYSEVSSTVASFDSNGVVSYKGNRYQIDVGVMDAHQRIRIEDDGEILLFYDTDTNELLAKYPVTEDKILDRYSNLKEIITETGFLILL
SIO_010081: SD1D_RS01050
subclass of: SO_0000673
so part of: SD1D_RS01050
location: 218788..219963
location: region:218788-219963:1
so has part: feature:218788-219963:1:exon

WP_242955231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218788-219963:1:exon

SD1D_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01055
old locus tag: SD1D_0216
so part of: sequence
location: 220258..220944
location: region:220258-220944:1
so has part: feature:220258-220944:1:exon
subclass of: SO_0000010

position:220258:1
position: 220258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220944:1
position: 220944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220258-220944:1:exon

SD1D_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01055
old locus tag: SD1D_0216
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014254905.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MADITEIRELAKKLNLWNIARGYIDLNDEKLSNLDYLQMILQKELEIRARQKQIKLRRASKLPNKVFELSNLNKGLEWQIKQLSHLTWLNEEQNVILLGKCGTGKTSLAVHLGETAIGNGHKTYYASIDTFVSIVENKDINPKAGATFSYIRECDLIIIDDVFYVEPTRAELQVFYRAVTFLNETRSIIFITNRELSAWIDAAEDKHLCQTLLDRMTVNCQIVRLTDK
SIO_010081: SD1D_RS01055
subclass of: SO_0000673
so part of: SD1D_RS01055
location: 220258..220944
location: region:220258-220944:1
so has part: feature:220258-220944:1:exon

WP_058257208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220258-220944:1:exon

SD1D_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01060
old locus tag: SD1D_0217
so part of: sequence
location: 221240..221725
location: region:221240-221725:1
so has part: feature:221240-221725:1:exon
subclass of: SO_0000010

position:221240:1
position: 221240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221725:1
position: 221725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221240-221725:1:exon

SD1D_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01060
old locus tag: SD1D_0217
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012032691.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA recombinase
translation: MENTGLFCTASTILEDTLKEKIVEAINVAVSGKNSFLAILKKNIETVLSEDLDESTADIDKRLEELQTELIQKANSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFLNTQTGDITEFDDKLVRKLVEKAIVYDDRLMVEFKSGLEINVHP
SIO_010081: SD1D_RS01060
subclass of: SO_0000673
so part of: SD1D_RS01060
location: 221240..221725
location: region:221240-221725:1
so has part: feature:221240-221725:1:exon

WP_157893078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221240-221725:1:exon

SD1D_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: metE
locus tag: SD1D_RS01065
old locus tag: SD1D_0218
so part of: sequence
location: 221824..224100
location: region:221824-224100:1
so has part: feature:221824-224100:1:exon
subclass of: SO_0000010

position:221824:1
position: 221824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224100:1
position: 224100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221824-224100:1:exon

SD1D_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: metE
locus tag: SD1D_RS01065
old locus tag: SD1D_0218
EC number: 2.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011640353.1
GO function: GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
translation: MKTSVIGYPRIGTLRELKFAVEKYLRKELTKEELQAIASKLREEHWKAQKNNGIDFITSNDFSFYDNLLDTAVLLNIVPNRYRQLKLDALDEYFAMARGYQGDKGDVKALPMKKWFNTNYHYIVPEIDDDTEFLLVGTKPFDEYVEAKNCGIETKSAIIGAFTFLKLVKFAGKRTVEDSITDVVRSYSDILNKFSVLGARWVQFDEPALCMDLSEEDIVLFSKIYERILSEKKNTKVLLQTYFGDIRDCYNRVVAMPFDGIGLDFVEGKKTLELVRRFGFPEDKTLFAGVVNGKNIWRNNYSNTVNLIRELGEYCKEIVLSTSCSLIHVPYTLKNESSLSQDYKKYLAFAEEKLMELSELKKILSCSDPASTEEYVDNQKLFNLPRNCENTAVQSAVSGLSKDDFIRYPDSGEREKIQKAVFNLPLLPTTTIGSLPQTAEVKENRSNYKKGKITFEQYVTFIKGKIAEWIALQEKIGLDVLVHGEFERNDMVEYFGENLDGFLITEKGWVQSYGTRCVKPPIIWGDISRSKPITVDYSLYAQSLTSKCVKGMLTGPVTILNWSFPREDISLKDCAFQIALAIKDEVLELEANGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPAFRLVHSGVKPETQIHTHMCYSEFADIIKDIENMDADVITFEAARSDLSIVDTLSECGFKTQVGPGVYDIHSPRIPGIQEIKKALIKMLEKIPKEKLWVNPDCGLKTREKAETVASLENLVIAAKEIRRSLSV
SIO_010081: SD1D_RS01065
subclass of: SO_0000673
so part of: SD1D_RS01065
location: 221824..224100
location: region:221824-224100:1
so has part: feature:221824-224100:1:exon

WP_058257209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221824-224100:1:exon

SD1D_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: metF
locus tag: SD1D_RS01070
old locus tag: SD1D_0219
so part of: sequence
location: 224097..224960
location: region:224097-224960:1
so has part: feature:224097-224960:1:exon
subclass of: SO_0000010

position:224097:1
position: 224097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224960:1
position: 224960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224097-224960:1:exon

SD1D_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: metF
locus tag: SD1D_RS01070
old locus tag: SD1D_0219
EC number: 1.5.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008717729.1
GO function: GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO process: GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylenetetrahydrofolate reductase [NAD(P)H]
translation: MKICELFQMKKVFSFEVFPPRRIDSVNIIYDTIEKLKGLNPDFISVTYSAGGSESNADTFKIASAIKNNYGIESVAHLPSINHTKVEVLKILEDLRTAGIENILALRGDVNPSFSPKNDFKFASDLISFIKEHGDFNIIAACYPEGHFESPSIIDDIRNLKRKVDAGANQLITQLFFDNNCFYSFRERAAIAGINIPIEAGIMPVVNKKQIERIVALCRVNLPKKFLAIMNRYENNPEALRDAGIAYAVDQIIDLIAQGVDGIHLYTMNNPYIAHRIYEAINTLLVA
SIO_010081: SD1D_RS01070
subclass of: SO_0000673
so part of: SD1D_RS01070
location: 224097..224960
location: region:224097-224960:1
so has part: feature:224097-224960:1:exon

WP_058257210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224097-224960:1:exon

SD1D_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01075
old locus tag: SD1D_0220
so part of: sequence
location: complement(224994..225920)
location: region:224994-225920:-1
so has part: feature:224994-225920:-1:exon
subclass of: SO_0000010

position:224994:-1
position: 224994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225920:-1
position: 225920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224994-225920:-1:exon

SD1D_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01075
old locus tag: SD1D_0220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004607880.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MTLQQLKYIIKIVECGSITEAAKQLFITQPSLSAAVKDLEKELGIEIFYRTAKGISLSDDGAEFLSYARQIIEQTELMEQRYMGKKPSKKLCSISTQHYAFAVNAFVELLLDLDIDEYEFTLRETRTYEIIEDVKNLRSELGIIYLSNFNEKVLNKILKENHLVFNLLFEADPHVFISSKHPLAKNETVTLEDLNNYPFLAFEQGTYNSFYFSEELLSTIPRKKTIYVSDRATLFNLLIGLNGYTICSGVLSRDLNGNNIISVPLITDERMRIGWIANEKTHLSPLAIEYISKLKKWICEYGYSIESI
SIO_010081: SD1D_RS01075
subclass of: SO_0000673
so part of: SD1D_RS01075
location: complement(224994..225920)
location: region:224994-225920:-1
so has part: feature:224994-225920:-1:exon

WP_023062511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224994-225920:-1:exon

SD1D_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: fabG
locus tag: SD1D_RS01080
old locus tag: SD1D_0221
so part of: sequence
location: 226079..226813
location: region:226079-226813:1
so has part: feature:226079-226813:1:exon
subclass of: SO_0000010

position:226079:1
position: 226079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226813:1
position: 226813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226079-226813:1:exon

SD1D_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: fabG
locus tag: SD1D_RS01080
old locus tag: SD1D_0221
EC number: 1.1.1.100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004627007.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-oxoacyl-ACP reductase FabG
translation: MKKTVLITGASRGIGREIAKLFAANDYNVAINYFKSEEEAEKLYLHLRDEGYSVIKVQGDVSNRIQVDSMMNIIYNRFGDIDVLVNNAGVAQQKLFTDISEDDWDWMFNVNIKGMFNCCQAVLPKMINNKRGKIINISSIWGLTGSSCEVHYSASKAAVIEFTKALAKEVGPSNIQVNCVAPGIIKTDMITHLNTSIIEKLKSDTPLGILGTPRDIAEVVLFLASSKADFITGQIISPNGGFVI
SIO_010081: SD1D_RS01080
subclass of: SO_0000673
so part of: SD1D_RS01080
location: 226079..226813
location: region:226079-226813:1
so has part: feature:226079-226813:1:exon

WP_058257211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226079-226813:1:exon

SD1D_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01085
old locus tag: SD1D_0222
so part of: sequence
location: 227520..228098
location: region:227520-228098:1
so has part: feature:227520-228098:1:exon
subclass of: SO_0000010

position:227520:1
position: 227520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228098:1
position: 228098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227520-228098:1:exon

SD1D_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01085
old locus tag: SD1D_0222
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVLDKDRKSFYQFKENGIALICTIGDGKKEWHSNIEDALKVEFDGGGNAMRRFGIQMIDHSVSSDWWKSIIKHFFKVGDNFEIRCWKEETEEILQAQQYGTATDEGNEISIKGVLTDKLLLELMTDNPSDKDIYNKMTKYFTINVKNELCDICSAHYGTEMYITIYSDKDILFFEQVMSKYSDDYFSIGEW
SIO_010081: SD1D_RS01085
subclass of: SO_0000673
so part of: SD1D_RS01085
location: 227520..228098
location: region:227520-228098:1
so has part: feature:227520-228098:1:exon

WP_058257212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227520-228098:1:exon

SD1D_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01090
old locus tag: SD1D_0223
so part of: sequence
location: 228137..228592
location: region:228137-228592:1
so has part: feature:228137-228592:1:exon
subclass of: SO_0000010

position:228137:1
position: 228137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228592:1
position: 228592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228137-228592:1:exon

SD1D_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01090
old locus tag: SD1D_0223
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016147223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVCRFIASDFPLTEFASSQDYPIEINVDNGTIYDGGADDNYFLIPFLNVADYTDKKYGVYLEWDYTDGRAKQFIEYIKTALQKSDVIEFWHVWLMDYYEFEDRPFIHRKAISIDELTTEHIKEIDNAVIWNTPDKMYPERPSFYCLTITR
SIO_010081: SD1D_RS01090
subclass of: SO_0000673
so part of: SD1D_RS01090
location: 228137..228592
location: region:228137-228592:1
so has part: feature:228137-228592:1:exon

WP_058259154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228137-228592:1:exon

SD1D_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01095
old locus tag: SD1D_0224
so part of: sequence
location: 229599..230222
location: region:229599-230222:1
so has part: feature:229599-230222:1:exon
subclass of: SO_0000010

position:229599:1
position: 229599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230222:1
position: 230222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229599-230222:1:exon

SD1D_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01095
old locus tag: SD1D_0224
inference: COORDINATES: protein motif:HMM:NF012655.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MNKRDAAETKARILSAAERLFSEVGFDKARVDDIAKEAGVNKALIYYYFESKDEILETLFSSLVEDAKRMLVESVEKTSDVLNEDNYKALFDVYIRFIMEKRKILKVAIAESVKESSSISVVMELGNLIINAEIESIRKACESKGLNYPEDKKEILVMEFFTGLMPFICFALFEDQWESYYHMSEKELCEYFYKAFKKTHLAAHLPK
SIO_010081: SD1D_RS01095
subclass of: SO_0000673
so part of: SD1D_RS01095
location: 229599..230222
location: region:229599-230222:1
so has part: feature:229599-230222:1:exon

WP_058257213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229599-230222:1:exon

SD1D_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01100
old locus tag: SD1D_0225
so part of: sequence
location: 230287..231516
location: region:230287-231516:1
so has part: feature:230287-231516:1:exon
subclass of: SO_0000010

position:230287:1
position: 230287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231516:1
position: 231516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230287-231516:1:exon

SD1D_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01100
old locus tag: SD1D_0225
inference: COORDINATES: protein motif:HMM:NF018234.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MEKNERINKLLEETEEVVDPHRQFYRVRFDDNSMDFAFQWMLGAIRNGGGDIGEMFYTAAQIEDYNPDSWASEWPKIAERVEKRAEAAESGSHLVSAREFYQKAACYYRAALTALPPQKPEFLKLYEKSLACFSKAGTMFEPQFEMVRIPFENTYLPGVYIRASKSQNKMKTIIAIGGAETFFIDLYFHIAPSALRRGYNFITVDIPGQGILPLEGQFFRPDTEKPIGAIIDFILNKPEVDQDRIAVYGISGGGYYVPRASAYDKRIKACISNCAVPDIGKIMGEMAIQNQKAVSAGIKMSPFNIRMFQIMAWRHGVSMDNIPGLLEKTRDFVFNPSLITCPVLNICSSGEYLNPASRAMEDYYMKALPNPNKKMIIASFEDGGGTHCLGENTGLLSALLFDWLDEVFA
SIO_010081: SD1D_RS01100
subclass of: SO_0000673
so part of: SD1D_RS01100
location: 230287..231516
location: region:230287-231516:1
so has part: feature:230287-231516:1:exon

WP_058257214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230287-231516:1:exon

SD1D_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01105
old locus tag: SD1D_0226
so part of: sequence
location: 231548..232714
location: region:231548-232714:1
so has part: feature:231548-232714:1:exon
subclass of: SO_0000010

position:231548:1
position: 231548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232714:1
position: 232714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231548-232714:1:exon

SD1D_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01105
old locus tag: SD1D_0226
inference: COORDINATES: protein motif:HMM:NF024109.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MTSKLKTKIPVGYFHFHDDVGLNFQFNRALVNQCPMDEMMEAAQNIKTYADVKDVMTVLAEKALAERRILNASFYCRFAEFFCFGDSAEKKRLFDQFIQLFYKALEADMIERHKIEYPGGFLKAIRVKPDRSKTGTVVVHGGGDSFVEEFYLSVRGLVDEGFEVIMFEGPGQGEPLQKYNIRMTHEWEKPTKAVLDYFDLDNVTLVGISLGGYFALRAAAFEKRIRRVIAWDVVYDFFECVMGRNGMLKYYIINALVSINAKPIINCIARRQMRGKEMEKWIYDQMMYTFGAETPFDYLKTLKRYRCTKDISSSVSQDVLLLAGADDHIIPVRMYERQFKALVNARSVEGRIFTKEDHASNHCQVGNIGLTLNYIIDWINRKSSEGVT
SIO_010081: SD1D_RS01105
subclass of: SO_0000673
so part of: SD1D_RS01105
location: 231548..232714
location: region:231548-232714:1
so has part: feature:231548-232714:1:exon

WP_058257215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231548-232714:1:exon

SD1D_RS12535
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12535
so part of: sequence
location: complement(233112..233246)
location: region:233112-233246:-1
so has part: feature:233112-233246:-1:exon
subclass of: SO_0000010

position:233112:-1
position: 233112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233246:-1
position: 233246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233112-233246:-1:exon

SD1D_RS12535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRQFHTWSSALFEEYQSAITEQSKKADAYWYDFSDENIEKFLSD
SIO_010081: SD1D_RS12535
subclass of: SO_0000673
so part of: SD1D_RS12535
location: complement(233112..233246)
location: region:233112-233246:-1
so has part: feature:233112-233246:-1:exon

WP_278319655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233112-233246:-1:exon

SD1D_RS12350
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12350
pseudo: true
so part of: sequence
location: <233969..234061
location: region:233969-234061:1
so has part: feature:233969-234061:1:exon
subclass of: SO_0000010

position:233969:1
position: 233969
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:234061:1
position: 234061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233969-234061:1:exon

SD1D_RS12350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003516014.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: amidoligase
SIO_010081: SD1D_RS12350
subclass of: SO_0000673
so part of: SD1D_RS12350
location: <233969..234061
location: region:233969-234061:1
so has part: feature:233969-234061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233969-234061:1:exon

SD1D_RS12355
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12355
so part of: sequence
location: 234085..234288
location: region:234085-234288:1
so has part: feature:234085-234288:1:exon
subclass of: SO_0000010

position:234085:1
position: 234085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234288:1
position: 234288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234085-234288:1:exon

SD1D_RS12355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVLGSIDRQAQGRISAPALVTINHKEDDTMSKEKGTIYLAYGSNLNLRQMAYRCPTVKVPNLNYKT
SIO_010081: SD1D_RS12355
subclass of: SO_0000673
so part of: SD1D_RS12355
location: 234085..234288
location: region:234085-234288:1
so has part: feature:234085-234288:1:exon

WP_242955232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234085-234288:1:exon

SD1D_RS12360
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12360
pseudo: true
so part of: sequence
location: <234292..>234453
location: region:234292-234453:1
so has part: feature:234292-234453:1:exon
subclass of: SO_0000010

position:234292:1
position: 234292
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:234453:1
position: 234453
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234292-234453:1:exon

SD1D_RS12360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009296616.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MFS transporter
SIO_010081: SD1D_RS12360
subclass of: SO_0000673
so part of: SD1D_RS12360
location: <234292..>234453
location: region:234292-234453:1
so has part: feature:234292-234453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234292-234453:1:exon

SD1D_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01120
old locus tag: SD1D_0227
so part of: sequence
location: 234621..235391
location: region:234621-235391:1
so has part: feature:234621-235391:1:exon
subclass of: SO_0000010

position:234621:1
position: 234621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235391:1
position: 235391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234621-235391:1:exon

SD1D_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01120
old locus tag: SD1D_0227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014254926.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside phosphorylase
translation: MLKESIFPILEFDSNKQAKLQPSSIIQKTPVPNACVITFFKEVINKKLESGELEQIGTSPSETVDIPIYETKYNGCHVGLVGGFVGAAGSAALLEELIASGFNKFIVCGGAGVLKKDIQVGHLVLPYSAIRDEGVSYHYIEPSREIECNPDAIMAIERILNQEKIPFIKAKTWTTDAIFRETEAKIAKRVAEGCVTVEMEAAAFFAVSKFRNVLLGQILYGGDDLSGIEWNNRSWISREKIRTNLVDLCLKIAVEL
SIO_010081: SD1D_RS01120
subclass of: SO_0000673
so part of: SD1D_RS01120
location: 234621..235391
location: region:234621-235391:1
so has part: feature:234621-235391:1:exon

WP_058257216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234621-235391:1:exon

SD1D_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01125
old locus tag: SD1D_0228
so part of: sequence
location: 235431..235634
location: region:235431-235634:1
so has part: feature:235431-235634:1:exon
subclass of: SO_0000010

position:235431:1
position: 235431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235634:1
position: 235634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235431-235634:1:exon

SD1D_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01125
old locus tag: SD1D_0228
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILNEYFSYYGNPIPIERVMELTENDLDDLYANSKDVDRINIYFHLLNQYYYLKRYNASIGICKKGY
SIO_010081: SD1D_RS01125
subclass of: SO_0000673
so part of: SD1D_RS01125
location: 235431..235634
location: region:235431-235634:1
so has part: feature:235431-235634:1:exon

WP_058257217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235431-235634:1:exon

SD1D_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01130
old locus tag: SD1D_0229
so part of: sequence
location: complement(235792..236952)
location: region:235792-236952:-1
so has part: feature:235792-236952:-1:exon
subclass of: SO_0000010

position:235792:-1
position: 235792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236952:-1
position: 236952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235792-236952:-1:exon

SD1D_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01130
old locus tag: SD1D_0229
inference: COORDINATES: protein motif:HMM:NF039834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5711 family protein
translation: MINNNSINKKRFPIKVIYICLLCIPILYIGFLHLRKNSSYSTYKIISSLSNLETTSNYINYRNGIIRYEKNGAVYIKEGKIIWNYSYEMNDPIVDVCEEYAVISDRGNKLLCIFNEKKCVGRINTLNTIITSKISSKGVVAVMMSDHDNYYVQLYYENGPLVVDSTQENMLVDMKMGIEKYGHLIDFAISKDGKKIVLDMLNLTSGKIRSNLGFYNYGEVGQNKIDRLVGGLPYENIIFPKIVFLNNDLVCAFKDKGFMIYSMPETPELVVDKTFEGKIKSVIYNEKYVGVVLEEESSPSKILLFNLKGKKILDKKFDFEYSHIFLSGNEIIMYNETTCYILRTNGTEKFRHTFDDIKAFLPCDSINRYVLVNELDILEIELSSKY
SIO_010081: SD1D_RS01130
subclass of: SO_0000673
so part of: SD1D_RS01130
location: complement(235792..236952)
location: region:235792-236952:-1
so has part: feature:235792-236952:-1:exon

WP_058257218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235792-236952:-1:exon

SD1D_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01135
old locus tag: SD1D_0230
so part of: sequence
location: 237316..237921
location: region:237316-237921:1
so has part: feature:237316-237921:1:exon
subclass of: SO_0000010

position:237316:1
position: 237316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237921:1
position: 237921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237316-237921:1:exon

SD1D_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01135
old locus tag: SD1D_0230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003525258.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MELSKKIQELRKQKKITQEELAEALFVSKSAILKWESGKAYPSIDSLKEMAKYFSVSIDELLSNEEILLLAEEDSKQNERHLRDLVFGFLDCSVIMLLFLPFFEQKINGVIYPVSLHYLKHFEPYMKTAYTAIVAGLVACGLLTLFLQNCWRTFWINIKGKISLTLSAFGALIFMISAQPNAAMYTFVLLIIKAVMLIKWA
SIO_010081: SD1D_RS01135
subclass of: SO_0000673
so part of: SD1D_RS01135
location: 237316..237921
location: region:237316-237921:1
so has part: feature:237316-237921:1:exon

WP_058257219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237316-237921:1:exon

SD1D_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01140
old locus tag: SD1D_0231
so part of: sequence
location: 237960..238316
location: region:237960-238316:1
so has part: feature:237960-238316:1:exon
subclass of: SO_0000010

position:237960:1
position: 237960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238316:1
position: 238316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237960-238316:1:exon

SD1D_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01140
old locus tag: SD1D_0231
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWIKFHDRYMDYVGFSYRYNGMFRRILFGYPGAYGECFLSDSIYIGEPDLKNLIIETSYGLPNKLHSYVKHDSTWDFTYEFERLIKNANYDFQLPGFIADYFLYKQWFENGVLIKTEE
SIO_010081: SD1D_RS01140
subclass of: SO_0000673
so part of: SD1D_RS01140
location: 237960..238316
location: region:237960-238316:1
so has part: feature:237960-238316:1:exon

WP_058257220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237960-238316:1:exon

SD1D_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01145
old locus tag: SD1D_0232
so part of: sequence
location: 238366..238848
location: region:238366-238848:1
so has part: feature:238366-238848:1:exon
subclass of: SO_0000010

position:238366:1
position: 238366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238848:1
position: 238848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238366-238848:1:exon

SD1D_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01145
old locus tag: SD1D_0232
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020458034.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavodoxin domain-containing protein
translation: MVIVYESKTGFTKKYAEMLADKTKLKLYHIKDISKISAEEEVVFLGWIKVGKIQGLNKLHKYNLKAVCGSGTAPCSKDNREAVIKRNNIKDIPFFYLRGGCLPVKDLKGIDKILMVIFLKILKSRKEKDEETEEVIAGLENGFNGVEEKNLEPILKWLNI
SIO_010081: SD1D_RS01145
subclass of: SO_0000673
so part of: SD1D_RS01145
location: 238366..238848
location: region:238366-238848:1
so has part: feature:238366-238848:1:exon

WP_058257221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238366-238848:1:exon

SD1D_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01150
old locus tag: SD1D_0233
so part of: sequence
location: 238999..239961
location: region:238999-239961:1
so has part: feature:238999-239961:1:exon
subclass of: SO_0000010

position:238999:1
position: 238999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239961:1
position: 239961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238999-239961:1:exon

SD1D_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01150
old locus tag: SD1D_0233
inference: COORDINATES: protein motif:HMM:NF019581.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase family protein
translation: MDLAGKLVSAPYVDPHLHLDYVYTLSEMGREGAGSGTLFEAIEMWPKFKENLTVESVKKLALKGIIDEVSQGVQHIRTHIDVTDPNFTALKAMLELREELKDKVEIQIVAFPQQGMYTYKGGRDLVEEALKMGADVVGGIPHYEPAREFGEKSVHDIVELALKYEKLIDVHCDETDDPHSRFVELLNALVLMEDYGEKTTASHTCSFGSADNSYAYRMIDLFKKSKMNFIACPTENAYLQGRQDTYPKRRGLTRVKEFMENGINIAFAQDSINDPWYPMGNGNMMNILDNGIHLAQIMSPEEIDKDLDLITYNGARCLNI
SIO_010081: SD1D_RS01150
subclass of: SO_0000673
so part of: SD1D_RS01150
location: 238999..239961
location: region:238999-239961:1
so has part: feature:238999-239961:1:exon

WP_278319661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238999-239961:1:exon

SD1D_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01155
old locus tag: SD1D_0234
so part of: sequence
location: 240471..241178
location: region:240471-241178:1
so has part: feature:240471-241178:1:exon
subclass of: SO_0000010

position:240471:1
position: 240471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241178:1
position: 241178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240471-241178:1:exon

SD1D_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01155
old locus tag: SD1D_0234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007868286.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MgtC/SapB family protein
translation: MEKIIELFVSFGLTEFQAVALVKTLLASLCGGLIGLEREMKGRPAGLKTFSLVCLGSTLAMITNDYIYTYIAGGSGDAARMAAQVISGIGFLGAGTIMVTGHNQIKGLTTAAALWVTAALGISIGCGFYFGGFAGLVVIYITSFIYRYLDSKIMKYSRIMRIYVEGTDEEFMLKLSKYIRDSNFKVLTLQRKSENKWFEDNSCAMIEMDLGKRMLHSTIMEEIKQIEGLCYIEEI
SIO_010081: SD1D_RS01155
subclass of: SO_0000673
so part of: SD1D_RS01155
location: 240471..241178
location: region:240471-241178:1
so has part: feature:240471-241178:1:exon

WP_058257222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240471-241178:1:exon

SD1D_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: brnQ
locus tag: SD1D_RS01160
old locus tag: SD1D_0235
so part of: sequence
location: 241353..242705
location: region:241353-242705:1
so has part: feature:241353-242705:1:exon
subclass of: SO_0000010

position:241353:1
position: 241353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242705:1
position: 242705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241353-242705:1:exon

SD1D_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: brnQ
locus tag: SD1D_RS01160
old locus tag: SD1D_0235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011968804.1
GO function: GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO process: GO:0015803 - branched-chain amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid transport system II carrier protein
translation: MNEKFSFKTTILIGALLFGLFFGAGNLIFPVHMGQLAGSNTLQTTIGFLITGVGLPLLGVIATALSQSESLYDMAKPISKIYSIFFTCMLYLTIGPLFAIPRTATVAFEVGINPFIEEKYLQLGLFIFSLIFFAVTLYFSLRPGRLLDWVGRYLTPIFLLLLSVLLIATFISPMGQVSKFDPQGNYIDRPLFTGILEGYHTMDALASLAFAIVIISNIEKSGVKSPKRKAIEIFKSGLVCAVGMSVIYASLAYMGATSLGSVSRADNGGKVMYMVSEHYFGFVGMILLAAIVTVACLKTAIGLITSCAQMFSEMFPKTVSYNKYAVIFTILSFVIANFGLNKIIQLSIPVLMFLYPLAISLILLSLLAPFINKQKDIYRWTIILTIIAAFFDFCNALPNNIKEAKIISGIIDFAHRCLPGFDYGFGWIIPALGGFIIGTIIWRIPTLKKE
SIO_010081: SD1D_RS01160
subclass of: SO_0000673
so part of: SD1D_RS01160
location: 241353..242705
location: region:241353-242705:1
so has part: feature:241353-242705:1:exon

WP_058257223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241353-242705:1:exon

SD1D_RS12365
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12365
old locus tag: SD1D_0236
so part of: sequence
location: 242745..243293
location: region:242745-243293:1
so has part: feature:242745-243293:1:exon
subclass of: SO_0000010

position:242745:1
position: 242745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243293:1
position: 243293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242745-243293:1:exon

SD1D_RS12365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12365
old locus tag: SD1D_0236
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTCIFCLTIFTLTLGIASIAKEAVNENVEELDKNNVLHIYPRIHGTYIPQNMIDEIKNLDNVVSVISQYNIYGLLEESKNNPIYNVTINGFDFNEGILEENIDYRGMNVSGIVLPNLTVSLNGEKVMEDYVGRTVFFTYEYREGEKILSETIECKVLGTYSAYGAMEENPLCLPMAVPPFLF
SIO_010081: SD1D_RS12365
subclass of: SO_0000673
so part of: SD1D_RS12365
location: 242745..243293
location: region:242745-243293:1
so has part: feature:242745-243293:1:exon

WP_058257224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242745-243293:1:exon

SD1D_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01165
old locus tag: SD1D_0237
so part of: sequence
location: 243257..243727
location: region:243257-243727:1
so has part: feature:243257-243727:1:exon
subclass of: SO_0000010

position:243257:1
position: 243257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243727:1
position: 243727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243257-243727:1:exon

SD1D_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01165
old locus tag: SD1D_0237
inference: COORDINATES: protein motif:HMM:NF015050.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTNGCASFPLLKLGYCNTKALEYAGKELREILKPDLPPVWHMGECLDNARASALFRALADFLGKDIKDMPFAFASPEWSNEKGVSAALGFRLLGINSYHSVYPPVQGSKNVMKYLFEDTKKTLGSVMVVEVDPIKLADKIILDIKQKRKDLNWNI
SIO_010081: SD1D_RS01165
subclass of: SO_0000673
so part of: SD1D_RS01165
location: 243257..243727
location: region:243257-243727:1
so has part: feature:243257-243727:1:exon

WP_058257225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243257-243727:1:exon

SD1D_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01170
old locus tag: SD1D_0238
so part of: sequence
location: complement(243804..245540)
location: region:243804-245540:-1
so has part: feature:243804-245540:-1:exon
subclass of: SO_0000010

position:243804:-1
position: 243804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245540:-1
position: 245540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243804-245540:-1:exon

SD1D_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01170
old locus tag: SD1D_0238
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002848418.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0071704 - organic substance metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulase family glycosylhydrolase
translation: MQRKAKKAINFLLVMVLAITLVSAFQLKSAFPRAATSDASVSLKAGNTWQSAGSTFLQVDGTITNKGKASITNWKVTVPLAPSGAVNSCWNMDYDLSDGILTITPSDHNQTVPAGGSITFGMILTNPGDFDTEKATLIIPGSPNNPEDPTDPANPQDPDDPVDPTNPSNPTAKPVPPPTTDDWLYTDGNKIVDKDGKEVWLTGVNWFGYNTGTNIFDGVWACNLNTTIRDIADRGFNILRIPFSSELILQWKNGIYPKANYNDYINPYLDGMNSLEIFDYVVGQCRANGLKIMIDIHSAETDAAGHFAPLWYTDKISEEDYLESLAWMANRYKNDDTIVAYDLKNEPHGAVGDKVRAIWNDSDDPNNWKAVAEKAALAVLSNNPNALVLVEGIQIYPKDINANRDYSSRNKDDYYNTWWGGNLRGVKDFPVELGKYQNKLVYSPHDYGPSVSAQPWFEKDYTMQSLYEDCWRDNWMYIHEEDIAPILIGEWGGFMTAPNIKWMTLFRDFIIEHKLHHTFWCFNANSGDTGGLVLHDFTTWDEEKYAFVKEALWQKNGKFVGLDHEIPLGANGITLSDY
SIO_010081: SD1D_RS01170
subclass of: SO_0000673
so part of: SD1D_RS01170
location: complement(243804..245540)
location: region:243804-245540:-1
so has part: feature:243804-245540:-1:exon

WP_058257226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243804-245540:-1:exon

SD1D_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01175
old locus tag: SD1D_0239
so part of: sequence
location: 245791..247212
location: region:245791-247212:1
so has part: feature:245791-247212:1:exon
subclass of: SO_0000010

position:245791:1
position: 245791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247212:1
position: 247212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245791-247212:1:exon

SD1D_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01175
old locus tag: SD1D_0239
inference: COORDINATES: protein motif:HMM:NF012377.2
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0071704 - organic substance metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulase family glycosylhydrolase
translation: MKFIRKKRLQKSLSAFLGCLLILMAASLFVPKKVEAATPYGQLKVVGNQLCNSSGQAVQLKGMSSHGLQWYGHYMNRDSINFMKNAWGANVVRAAMYTEERGYISNPSLMKSRTKEVVEAAIEAGIYVIIDWHILSDGNPNIHREQAKAFFEEMARTYGNYPNVIYEICNEPNGVSWSGEIKPYAEYIIPAIRAIDPDNIIIVGTSTWSQDVDIAANDPLPYSNIMYACHFYAGTHTQWLRDKIDNALSKGIAVFISEWGTSDATGDGGPYLAEAQRWIDFMDARKLSWCNWSLCDKNEVSAALRGGASTNGGWTDAQLSESGKFVSRNMKPVTIPTPIITPTPTPQVPTPTPRPGDPTPTPRPNQDNKITVSYEQNNWDTGSTVSITITNNSSTAIDGWVLEWDFPSGQEITNMWNATYTSSGSTVTAKNLSYNGNIGANGGSVTFGFNISHNGTNNKPSSFKLNGIVCDIN
SIO_010081: SD1D_RS01175
subclass of: SO_0000673
so part of: SD1D_RS01175
location: 245791..247212
location: region:245791-247212:1
so has part: feature:245791-247212:1:exon

WP_058257227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245791-247212:1:exon

SD1D_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01180
old locus tag: SD1D_0241
so part of: sequence
location: 247766..248038
location: region:247766-248038:1
so has part: feature:247766-248038:1:exon
subclass of: SO_0000010

position:247766:1
position: 247766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248038:1
position: 248038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247766-248038:1:exon

SD1D_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01180
old locus tag: SD1D_0241
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015395221.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MEIKKGSKGFYIGDSEDSPLAEITFIPQDDNKIIVDRTYVSDELSGRGVGKILLKELIEWARKENKKIIPQCSFVKVQMEKNEDYHDMLA
SIO_010081: SD1D_RS01180
subclass of: SO_0000673
so part of: SD1D_RS01180
location: 247766..248038
location: region:247766-248038:1
so has part: feature:247766-248038:1:exon

WP_242955234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247766-248038:1:exon

SD1D_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01185
so part of: sequence
location: 248059..248337
location: region:248059-248337:1
so has part: feature:248059-248337:1:exon
subclass of: SO_0000010

position:248059:1
position: 248059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248337:1
position: 248337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248059-248337:1:exon

SD1D_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01185
inference: COORDINATES: protein motif:HMM:NF024063.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3784 domain-containing protein
translation: MWLLIIVGIILIGIGLGVHVFKWYFLISGYNTMSKEKKEKVDIKGLARLLGIYAYINGGLFILAGGLVWLRIKMAYILGYNIFCNFNNLYFN
SIO_010081: SD1D_RS01185
subclass of: SO_0000673
so part of: SD1D_RS01185
location: 248059..248337
location: region:248059-248337:1
so has part: feature:248059-248337:1:exon

WP_087758712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248059-248337:1:exon

SD1D_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01190
old locus tag: SD1D_0242
so part of: sequence
location: 248258..248803
location: region:248258-248803:1
so has part: feature:248258-248803:1:exon
subclass of: SO_0000010

position:248258:1
position: 248258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248803:1
position: 248803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248258-248803:1:exon

SD1D_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01190
old locus tag: SD1D_0242
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYGLELKWLTSLVIIFFATSTIYILIRGQKFDKHIFHEDGTLRKGAWKQMALPMGIVVISLIFVACVMFFSLKPSKISIMDDGLQIHGMYGNLYRWESIEQVQLKDTLPSIQLRTNGSAIGSKLKGHFKTKELGSVKLFVDADNPPFIYLYTDNGTVIFNLIDINETQALYQEILDKLSMQ
SIO_010081: SD1D_RS01190
subclass of: SO_0000673
so part of: SD1D_RS01190
location: 248258..248803
location: region:248258-248803:1
so has part: feature:248258-248803:1:exon

WP_157893079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248258-248803:1:exon

SD1D_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01195
old locus tag: SD1D_0243
so part of: sequence
location: complement(248904..249575)
location: region:248904-249575:-1
so has part: feature:248904-249575:-1:exon
subclass of: SO_0000010

position:248904:-1
position: 248904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249575:-1
position: 249575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248904-249575:-1:exon

SD1D_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01195
old locus tag: SD1D_0243
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010073363.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent oxidoreductase
translation: MRKLLYITVNSKPENLSACKTVGRAFVNNFIKKHPDFTIEELDLYKAHIPRLEYQYFQRRNCIIDEEARKKLPEKEQKEIQRIVKLCDQFISAQVYVIAAPMWSLSFPAPLKEYIDCIIQESKTITFPEKGSKPEGLLNDKPRTVIYIQSSGAEIPWVMRPILNRGLNYIEDIMKSMGISNFERLLVDGTGTTEIERLEAINKAKIKIDDIIEKIELKETMLV
SIO_010081: SD1D_RS01195
subclass of: SO_0000673
so part of: SD1D_RS01195
location: complement(248904..249575)
location: region:248904-249575:-1
so has part: feature:248904-249575:-1:exon

WP_058257228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248904-249575:-1:exon

SD1D_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01200
old locus tag: SD1D_0244
so part of: sequence
location: 249741..250247
location: region:249741-250247:1
so has part: feature:249741-250247:1:exon
subclass of: SO_0000010

position:249741:1
position: 249741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250247:1
position: 250247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249741-250247:1:exon

SD1D_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01200
old locus tag: SD1D_0244
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010964859.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitroreductase family protein
translation: MEVIFNRRSIRRYKKQAVEEEKIEKILRAAMQAPSAANQQPWEFIVVRDKDNLKKLSEISAYSKMVAEAPLAIVVLGNEDRMRLQHHWEQDLAAATQNILLEAAYLGLGSVWLGVAPMEDRMKFIADVYGLKSKIKPFCVIAIGYPEEGQENKFVDRFDPTRIHYETY
SIO_010081: SD1D_RS01200
subclass of: SO_0000673
so part of: SD1D_RS01200
location: 249741..250247
location: region:249741-250247:1
so has part: feature:249741-250247:1:exon

WP_058257229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249741-250247:1:exon

SD1D_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: murF
locus tag: SD1D_RS01205
old locus tag: SD1D_0245
so part of: sequence
location: complement(250363..251733)
location: region:250363-251733:-1
so has part: feature:250363-251733:-1:exon
subclass of: SO_0000010

position:250363:-1
position: 250363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251733:-1
position: 251733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250363-251733:-1:exon

SD1D_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: murF
locus tag: SD1D_RS01205
old locus tag: SD1D_0245
EC number: 6.3.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016282293.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
translation: MKNMTLSNIAKACQGRLILNNHHDTTIKGVEIDSRKIEKDYLFIAHKGARVDGHDYIETAYTKGAIAVICEKAPANVDMPYILVNDSLTALKDIATWYRMQLDIPVIGISGSVGKTSTKEFVSSVLSQKYRVLKTQGNYNNEIGLPLTVLQIKEEHEIAVLEMGISDFGEMHRLSNIAKPDYCLLTNIGQCHLENLGSREGILKAKSEMFDFMNKDGSVILNGDDDMLSTIPQVKGKIPLRYGLSPNNHVYADNIISHGLLGSSCHIHIKDEIIPVKIPMAGRHMILNALAAAALGSVLGLTNAEISQGIEQIRPVSGRNNIISTDKWTIIDDCYNANPVSMKAAIDLLVMADTRQVAILGDMGELGLKEEYLHKEIGIYAASKNIDIIICLGKLSSHMYKGAKEILVSNNDRLFYFETLDGLIEALPSILKKDDTILVKASHFMGLDRLVEKLQA
SIO_010081: SD1D_RS01205
subclass of: SO_0000673
so part of: SD1D_RS01205
location: complement(250363..251733)
location: region:250363-251733:-1
so has part: feature:250363-251733:-1:exon

WP_058257230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250363-251733:-1:exon

SD1D_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01210
old locus tag: SD1D_0246
so part of: sequence
location: complement(251748..252779)
location: region:251748-252779:-1
so has part: feature:251748-252779:-1:exon
subclass of: SO_0000010

position:251748:-1
position: 251748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252779:-1
position: 252779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251748-252779:-1:exon

SD1D_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01210
old locus tag: SD1D_0246
EC number: 6.3.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015522215.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanine--D-alanine ligase
translation: MKIVVLAGGTSPERDVSLSTGKMIYKALKNKGHQTILLDVYLGYEGDTSNLFDIEKDWAEGIGNIGTYNPDIKEIKALRKGNPDHFFGPGVLEICDMADIVFLALHGENGEDGRIQAAFDLMGIKYTGTDYASSTIAMDKAVSKELFTYYNIPSPKGIYVRKGEEYTWDSFPCVVKVNNGGSSVGVSIVHSADEMDAAIDNALSYGDQLIIEQYIKGREFSVGVIDGKALPVIEIAPISGFYDYKNKYQAGNAIETCPADLDEAISKQMQDFAVMVFKALRLKTYARMDFLLNDKNEIYCLEANTLPGMTPTSLLPQEAKAIGIDFEDLCELIIDISLKKYNK
SIO_010081: SD1D_RS01210
subclass of: SO_0000673
so part of: SD1D_RS01210
location: complement(251748..252779)
location: region:251748-252779:-1
so has part: feature:251748-252779:-1:exon

WP_058257231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251748-252779:-1:exon

SD1D_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01215
old locus tag: SD1D_0247
so part of: sequence
location: complement(252919..253860)
location: region:252919-253860:-1
so has part: feature:252919-253860:-1:exon
subclass of: SO_0000010

position:252919:-1
position: 252919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253860:-1
position: 253860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252919-253860:-1:exon

SD1D_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01215
old locus tag: SD1D_0247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014119872.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase family protein
translation: MNTEKRLTKAYKEATIEYFDKDSKYVIFSDTHRGDDSVSDEFARNQVIFLHVLNYYNKNGYIYVEAGDGDELWEHKNFNHIRLAHKDIFIVLKKFYEAGRLRMLYGNHNIYLKNKKYVEKNYYQFYDEYNQKKVNLFQGIKPMEALVLKHRITKQEILIVHGHQGDLINDQFWYISMILLRYFWRFLHIVGFENPSSPARNLYKRHKVEKNYNKWIKKHKIMLICGHTHRIKFPKKNDLPYFNTGCCINTRGIPGIEIVDDTILMVDWRVKADENGNMRIERTIVRGPEPIERYNCKNIGNFSNDSNCSQIDS
SIO_010081: SD1D_RS01215
subclass of: SO_0000673
so part of: SD1D_RS01215
location: complement(252919..253860)
location: region:252919-253860:-1
so has part: feature:252919-253860:-1:exon

WP_058257232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252919-253860:-1:exon

SD1D_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01220
old locus tag: SD1D_0248
so part of: sequence
location: 254014..254295
location: region:254014-254295:1
so has part: feature:254014-254295:1:exon
subclass of: SO_0000010

position:254014:1
position: 254014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254295:1
position: 254295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254014-254295:1:exon

SD1D_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01220
old locus tag: SD1D_0248
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002569714.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF503 domain-containing protein
translation: MVVGTVRIKIYAPWVHSLKEKRMVVKSLCAKVKNKFNVSIAEVEDQDLHQSIVLGIACITSSSAHADKILDTVINFIEGNTEGDIINIERLLY
SIO_010081: SD1D_RS01220
subclass of: SO_0000673
so part of: SD1D_RS01220
location: 254014..254295
location: region:254014-254295:1
so has part: feature:254014-254295:1:exon

WP_058257233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254014-254295:1:exon

SD1D_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: metF
locus tag: SD1D_RS01225
old locus tag: SD1D_0249
so part of: sequence
location: 254371..255237
location: region:254371-255237:1
so has part: feature:254371-255237:1:exon
subclass of: SO_0000010

position:254371:1
position: 254371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255237:1
position: 255237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254371-255237:1:exon

SD1D_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: metF
locus tag: SD1D_RS01225
old locus tag: SD1D_0249
EC number: 1.5.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003403840.1
GO function: GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO process: GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylenetetrahydrofolate reductase [NAD(P)H]
translation: MEIASLFQKKKVVFSLEIFPPKKTSSIDTIYKTLDDLKELQPDFISVTYGAGGNAADNSTCDIASTILNTYGIVPLAHLTCVNNTKEEIGLILDRLKENGVKNILALRGDINPDIPAKKEFSYASELVQYIKNRGEFYISGACYPEGHVEAENIEKDIENLKIKVDAGVGHLISQLFFDNDLFYNFLEKVRKAGVKVPIQAGIMPVINKAQIERMVTLCGASLPSKFTKMMQRFEHSPEAIREAGIAYAVDQIVDLISQGVDGIHLYTMNNPYVARRISESIKGIINA
SIO_010081: SD1D_RS01225
subclass of: SO_0000673
so part of: SD1D_RS01225
location: 254371..255237
location: region:254371-255237:1
so has part: feature:254371-255237:1:exon

WP_058257234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254371-255237:1:exon

SD1D_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01230
old locus tag: SD1D_0250
so part of: sequence
location: complement(255288..256328)
location: region:255288-256328:-1
so has part: feature:255288-256328:-1:exon
subclass of: SO_0000010

position:255288:-1
position: 255288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256328:-1
position: 256328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255288-256328:-1:exon

SD1D_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01230
old locus tag: SD1D_0250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006781180.1
GO process: GO:0017013 - protein flavinylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD:protein FMN transferase
translation: MKKSIALSLFLIIGLLASSCDKAAKKYEGSFLVLFNTVTEIVAYTKDEEEFRELANFIYAELEEYHQLYDKYNSYDGINNIKTINDYAGKEPVKVDQRIIDLLKFSIYANELSKGNVNIGMGSVLEIWHDYRSLGIDNPTEAKLPPMELLEEAASHTNLDNLVIDEANSTVFLKDSKMRLDVGAIAKGYATEQIIKAALDRGYTDFLLSVGGNVRAVGGKGKEKAPWGVGIQNPDKESEENILYTLNLKDLSLVASGNYERYYTVEGKEYHHIIDPKTLMPSEYFTAVSIVCHDSGMADLLSTAIYNMSFEEGLALIEGLKDTEALWIFPDKSIKYSSGFEALIKK
SIO_010081: SD1D_RS01230
subclass of: SO_0000673
so part of: SD1D_RS01230
location: complement(255288..256328)
location: region:255288-256328:-1
so has part: feature:255288-256328:-1:exon

WP_058257235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255288-256328:-1:exon

SD1D_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01235
old locus tag: SD1D_0251
so part of: sequence
location: complement(256507..257517)
location: region:256507-257517:-1
so has part: feature:256507-257517:-1:exon
subclass of: SO_0000010

position:256507:-1
position: 256507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257517:-1
position: 257517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256507-257517:-1:exon

SD1D_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01235
old locus tag: SD1D_0251
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020815350.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKILSLVICLALATTMLTACNNAGNNNKGVKTGLAVISSAAKSSETTTEANGKVQVDSTAVGVLVDDKGVITNCVIDVIQSIYDYSATGEILTDLGTTFISKKELGDAYNMKSTSPIGKEWFEQAEALEKYVTGKTLEEVKGIAVDGGYPTEEDLTSSVTMNIATIIDAIEKAVNNAKDLGAKEGDKLGLGLTSTAHKSSKNASEEGDGLVQAYTHYGLVSFDKDGKITSSIIDASQTNVSFNTEGKITSNLEDTFKTKNELGYDYNMKDSSSIGKEWFEQSEAFSKYIKGKTVEDVKGISLDYGVPTDEDLASSVTITITDYITVVEKAAAVAK
SIO_010081: SD1D_RS01235
subclass of: SO_0000673
so part of: SD1D_RS01235
location: complement(256507..257517)
location: region:256507-257517:-1
so has part: feature:256507-257517:-1:exon

WP_058257236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256507-257517:-1:exon

SD1D_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01240
old locus tag: SD1D_0252
so part of: sequence
location: complement(257730..258272)
location: region:257730-258272:-1
so has part: feature:257730-258272:-1:exon
subclass of: SO_0000010

position:257730:-1
position: 257730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258272:-1
position: 258272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257730-258272:-1:exon

SD1D_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01240
old locus tag: SD1D_0252
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003483025.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore coat protein
translation: MITNVSLTTKEQYLLQDQKSHEQQCVLKYDNYANLASDAQLKSIFTTLGQKEKEHLQTINQLLNGQIPNITSQGGSSSQSQNQLQQQGQQQNQQQQSPMAMSGQPSMQQSASNTTNLTDKDMCTDMLSTEKYISGTYDTAIFEFKDPRIRDVLNHIQKEEQKHGETIFQYMLSKGMYTPQ
SIO_010081: SD1D_RS01240
subclass of: SO_0000673
so part of: SD1D_RS01240
location: complement(257730..258272)
location: region:257730-258272:-1
so has part: feature:257730-258272:-1:exon

WP_058257237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257730-258272:-1:exon

SD1D_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01245
old locus tag: SD1D_0253
so part of: sequence
location: complement(258357..258794)
location: region:258357-258794:-1
so has part: feature:258357-258794:-1:exon
subclass of: SO_0000010

position:258357:-1
position: 258357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258794:-1
position: 258794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258357-258794:-1:exon

SD1D_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01245
old locus tag: SD1D_0253
inference: COORDINATES: protein motif:HMM:NF013777.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MKNLYNLPCSIAQALNIIGDKWTLLIIRQLMLGYDTYSSIQERLEGIPSNLLSNRLKALEQDGLITAKLYQSHPPRYRYLLTESGRDLSDVFNSIILWGEKNLQKCHKKLTHSDCGHKIELTYYCPKCNKTINREDIVVTDSKHD
SIO_010081: SD1D_RS01245
subclass of: SO_0000673
so part of: SD1D_RS01245
location: complement(258357..258794)
location: region:258357-258794:-1
so has part: feature:258357-258794:-1:exon

WP_058257238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258357-258794:-1:exon

SD1D_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01250
old locus tag: SD1D_0254
so part of: sequence
location: complement(258839..260149)
location: region:258839-260149:-1
so has part: feature:258839-260149:-1:exon
subclass of: SO_0000010

position:258839:-1
position: 258839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260149:-1
position: 260149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258839-260149:-1:exon

SD1D_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01250
old locus tag: SD1D_0254
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007489367.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein CcdA
translation: MLDNLLSLDNISFLLVFIEGFLSFLSPCVIPLIPIYMSYLAGNAKQTDEEGRITYKQTAVFIHTIFFVLGISFAFFLLGMTFTALGTFFKTNQLLFTRIGGILIIALGLYQVGLLDIKFLHKERKLRLNLINRQMNPLAAFIMGFTFSFAWTPCVGPALSSVLILASGAKSSLIGNLLVLIYAVGFIIPFLLLGLFTSQVLNFLKSKQKLLKYTVKIGGVILILIGIMTFTGWMNGISKYLNKISQPLGSKQEEQNEDTISDKEISKDDNSNDDNSPNNTSEEKEKFPAIDFTLKDQYGNEHTLSDYKGKVVFLNFWATWCNPCLREMPDIEKIYKQYGKNQEEVIILAVANPSSDEYPNNADVSKDEIIAFLDENGYTFPVVFDETGNLLSEYLISAFPTTFLIDKEGNISGYAPGMLTKDMMDNVIEQTLNSTQ
SIO_010081: SD1D_RS01250
subclass of: SO_0000673
so part of: SD1D_RS01250
location: complement(258839..260149)
location: region:258839-260149:-1
so has part: feature:258839-260149:-1:exon

WP_058257239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258839-260149:-1:exon

SD1D_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01255
old locus tag: SD1D_0255
so part of: sequence
location: complement(260363..261262)
location: region:260363-261262:-1
so has part: feature:260363-261262:-1:exon
subclass of: SO_0000010

position:260363:-1
position: 260363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261262:-1
position: 261262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260363-261262:-1:exon

SD1D_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01255
old locus tag: SD1D_0255
inference: COORDINATES: protein motif:HMM:NF014376.2
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MRILDGIYEKVDYQNNSPILLHTNKEVDSYPAHWHTAVETIMPISNIYTVVIGKTTYLLHEGDILIIPPGELHELIAPNDGTRQILLFDYSLINGLKGISNIFTVLNQPRLITSRNEPEINAELVKIFHEITNEYNSNKSLKEAAIYSLIIKMFVILGRKYMNTEHIFPDVKLNKQKEYIEKFNLIFDYINENFMEEISLDTIADVAGFSKFHFSRLFKQFTDMSFYDYLNQRRVKEAERLLLNPNLSITEVAMRSGFSSISTFNRVFKTFKQCTPTEFKNLYQRRNRIKQSIHMLNSK
SIO_010081: SD1D_RS01255
subclass of: SO_0000673
so part of: SD1D_RS01255
location: complement(260363..261262)
location: region:260363-261262:-1
so has part: feature:260363-261262:-1:exon

WP_058257240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260363-261262:-1:exon

SD1D_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01260
old locus tag: SD1D_0256
so part of: sequence
location: 261730..264648
location: region:261730-264648:1
so has part: feature:261730-264648:1:exon
subclass of: SO_0000010

position:261730:1
position: 261730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264648:1
position: 264648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261730-264648:1:exon

SD1D_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01260
old locus tag: SD1D_0256
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006855166.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MSVASIFKKKSFYFILLIVSAIIGYSIYVRIANERYEASLTSEDIKPVETEEIVGRDDIYSAYLERYKEASKPNHMIVVDIKNYSLAEKTDAYNEYLGKKDVVVSHEEGFVEWEVDIPEAGLYNISLDYYPLEGRGIDIERALYINGVMPFSGSDTLTFSRVWTDAGEIRMDNRGNEIRPTQTEAPRWESTYLRDYMGYYIEPYSYYFNKGKNTIRLVAISEPVAISNLVIGQKEELPSYDEYIASFDANNYKNTDTDFYYKKQGEEAEYRSSPTLYAIFDRASSNTEPYSASKIKLNSIGGDQWRVAGQWIEWEFEVPEDGFYNISFKAKQNYNRGMVSVRTVMIDGQTPFKEAAQLEFKYNTGWQLTTLADEEGVPYKIPLTKGKHTIRLEVTMGKIGDILTELDKSIYRLNSIYRKILVLTGARPDRYRDYRIDLKYPEVMAAMEEEIKVLNDITKNLEEATGQRGADTAVVVNMSKKLQRFIKNPDSIPRGMEGFKMDISSLGTSTLNLSNSQLDIDYIYINADGAKLPNVEESFVDKVAHELRSFAASFFEDYSTLGSVYEEGKVIDVWLLSGRDQATILKNMIDEIFTPTYGIGVNVKLIDANTLLPAVVAGTGPDIALSVFNHVPVDYAIRDAAVDLSQFEDFDQVASEFHESVFVPYQYDGGIYALPETQNFSVMFYRTDIMEEIGAKVPDTWDEVMELLPLLQKHNMEFAMPSVERVTNGVQNPDTSGMMALLYQKGGSLYTEDGKRTLLDSEEAVEAFEFFTRFYTHYSLPSQYDFVNRFRTGEMPIGIQDYSNFNVLSVFAPEIRGLWEFSLVPGTKKEDGTIDRSVPFGGTCSMILKDAKDYDASWTFLKWWVSSETNTRFGRELESIMGSAARYATANKVAFEELAWSNKDAEIIREQWKWTVGTPNVPGGYSTVRHMINAYRKVAYKKEDPRETLLDYTRTINDEIKYKRIELGLDVD
SIO_010081: SD1D_RS01260
subclass of: SO_0000673
so part of: SD1D_RS01260
location: 261730..264648
location: region:261730-264648:1
so has part: feature:261730-264648:1:exon

WP_058257241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261730-264648:1:exon

SD1D_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01265
old locus tag: SD1D_0257
so part of: sequence
location: 264674..265612
location: region:264674-265612:1
so has part: feature:264674-265612:1:exon
subclass of: SO_0000010

position:264674:1
position: 264674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265612:1
position: 265612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264674-265612:1:exon

SD1D_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01265
old locus tag: SD1D_0257
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006858674.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter permease
translation: MSAKFDQWKERKKRQASYTIKSIWKSRVQYAFLLPYALLFTVFFVVPVVISIFYSFTYYDVLNPPDFIGLQNYINLLLADDVFLISVQNTFLLAVITGPVGYLMSFLFAWLIHELPRVLRSIFVLIFFAPSIGVNMFMLFGTLFSSDSYGWANAYLMDWGITSQPIFWLTDPKYMMTVVIIVVLWMSLGNGFLSFIAGLQTISQDQYEAGYVDGIKNRWQELWYITLPNMKPMLLFGAVMAITQSFTVGEVANALCGFPSTDYAASTVVTHLMDYGSLRFDMGYASAIATILFLAMILSKKAVNAMLNKVGT
SIO_010081: SD1D_RS01265
subclass of: SO_0000673
so part of: SD1D_RS01265
location: 264674..265612
location: region:264674-265612:1
so has part: feature:264674-265612:1:exon

WP_058257242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264674-265612:1:exon

SD1D_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01270
old locus tag: SD1D_0258
so part of: sequence
location: 265665..266525
location: region:265665-266525:1
so has part: feature:265665-266525:1:exon
subclass of: SO_0000010

position:265665:1
position: 265665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266525:1
position: 266525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265665-266525:1:exon

SD1D_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01270
old locus tag: SD1D_0258
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010167831.1
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MIKLKKRKPNRSRWGDFFVYLVLLVFGWFFILPLVYAVNSAFKPLDEIFLFPPKLWVGKPTLDNFADLFVLMGKTWVPFSRYIFNTVFITVVGTLGHLIVASMAAYVLSKYRFPGSKLFFTIVVSALMFTPQVMAIPNYLVMTKLGWVNTYWAIIVPAFAAPIGLFLMKQFMEQIPDVLIEAAKVDGAKEVRIFIKIILPLVKPASLTLSIFSILNLWNTRASNFIYDEELKTLPYALSQVVTGGIIARAGVSAAVTLFILIVPLLFFILAQSSIIETMASSGIKE
SIO_010081: SD1D_RS01270
subclass of: SO_0000673
so part of: SD1D_RS01270
location: 265665..266525
location: region:265665-266525:1
so has part: feature:265665-266525:1:exon

WP_058257243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265665-266525:1:exon

SD1D_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01275
old locus tag: SD1D_0259
so part of: sequence
location: 266535..268031
location: region:266535-268031:1
so has part: feature:266535-268031:1:exon
subclass of: SO_0000010

position:266535:1
position: 266535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268031:1
position: 268031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266535-268031:1:exon

SD1D_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01275
old locus tag: SD1D_0259
inference: COORDINATES: protein motif:HMM:NF019339.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MGRPVKKYIVCLLLLTLVLSPKAKVSAESESYTYTYEYFGYQLESPDAYTPQAQLLGSQLGIGDFNNPKSLFVRDNYLYIVDTGNNRIVVVNKYFELVQVIDKVFINGQESTFLNPSDVFVDKKGELYICDTDNNRVLHTDKDLNVIKTYVKPDDPTVLGETNFAPLKCVGDSSGRLFVLAANVNQGFMEYDKEGNFTNFTGANPVKATFFQALVKRLMTKEQRERMIQFVPTEYSNLAIDKDDFLYATMTTFTPGQLANKTVYPVRMLNSIGADILVRNGYEPPIGDIQWGSGGDISGPSRFEDVVPMENDTYFCLDRNRGRIFGYDFQGNLLFAFGGVGNKLGYFQYPISIESMGTDLFVLDNRSLSVTRFTLTEYGNYIYKGLELYKEGRYDESADYWRKALRLNGNYDLAYIGIGRALLRQGEYKEAMKYFKSKRDVNNYSKAFAEYRQEWVEENIKYLLLGGAALIVIPLIISKIRKMVKGGAAKYEHNGREF
SIO_010081: SD1D_RS01275
subclass of: SO_0000673
so part of: SD1D_RS01275
location: 266535..268031
location: region:266535-268031:1
so has part: feature:266535-268031:1:exon

WP_058257244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266535-268031:1:exon

SD1D_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01280
old locus tag: SD1D_0260
so part of: sequence
location: 268006..268668
location: region:268006-268668:1
so has part: feature:268006-268668:1:exon
subclass of: SO_0000010

position:268006:1
position: 268006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268668:1
position: 268668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268006-268668:1:exon

SD1D_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01280
old locus tag: SD1D_0260
inference: COORDINATES: protein motif:HMM:NF016764.2
GO function: GO:0031267 - small GTPase binding [Evidence IEA]
GO process: GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Yip1 family protein
translation: MNIMAESFKDRLRQLGKTLKYSLYVIFHPFDGFWDLIHEKRGSMGAAHTIIILVVLTQIWTWTYSAFPYYLPQWEYFNLFMRVLPTVVLFIIWCIANWCLTTLMDGKGKFNHIYMATAYAFTPYVLINLPLILLTYVLTYEESTYYTVFNNISIIWCVILVLAAMMMIHDYTFGKAVVSSLLTIVAMLVIIFLIVMFFSLITQSVGYFVALYKEATFRLY
SIO_010081: SD1D_RS01280
subclass of: SO_0000673
so part of: SD1D_RS01280
location: 268006..268668
location: region:268006-268668:1
so has part: feature:268006-268668:1:exon

WP_058257245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268006-268668:1:exon

SD1D_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01285
old locus tag: SD1D_0261
so part of: sequence
location: 268697..271225
location: region:268697-271225:1
so has part: feature:268697-271225:1:exon
subclass of: SO_0000010

position:268697:1
position: 268697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271225:1
position: 271225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268697-271225:1:exon

SD1D_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01285
old locus tag: SD1D_0261
inference: COORDINATES: protein motif:HMM:NF039504.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5696 domain-containing protein
translation: MKTRKKLLLLLVIPFLLGVMSACSKEAVDDNIEVYSQGEIEDKEIVIENNDLEFHFFPETTQFYVLKKSTGFIWHSNPENTEDQGGFRKELESTLTLRYNTESGSKTLLNNYGLSIEKGNYTYEKLENGVKVNYTIGNVDKVYYVPKAVPESRFLEFYDKMSKSVQSQISMSYRVYDINNLRKSDDKEALIATYPDIVDEPIYVMMDGTPQYLIEMAEEKFAEVGYTAEDYEIDAARYGSTKSQDTPVFNVSVIYELKDDGLEVSIPLSDVKYKQKYPIVEIRPLPYFGAGGESDEGFIFVPEGSGAIINFNNNKHSQNSYRTDIYGWDYALSRDAVIDETRMNMPLFGISKNGSSFICILEEGNSYSFIEAAVSGSSHGYNYACANYNLLHSEEMDISAKSDKTVRMFEEKLPDEVLVQKYIFIDNEDYVSMATKYRQYLMNRFPVLVKKTESDLPVAVEIIGAIDRTKHYLGIPFRRPYELTSYEEAQGIIKELNEAGISDLNVNYKGWFNGGILHKAPNKVKLINELGSKKDFKNLVKYTDENDVNLYLGATIQFVYNNSLIDNFVVIRDGAKHVNRKVVELKPYSPVYYGKIDDLYTYYLAKPSYYMNNLNSYAKEIAKRGVKGIAFEDIGMILSADYNKKNPVSREEVKNMQMEKLKELASEEYNIMIRSGNMYAVPYADFIIDLNLGTKGYNIIDDEIPFYEIVLHGLVSYAGSAINLSPDYTKNLLKTVETGAGLYFCFMSADAFDLRDSRYTNYYSSNFNDWKDEAVELYQKMKDDFGHLYNQFITDHQKLAAGVYLTQYEDGTKVIVNYNDRAYNHKGIQVPAKDYIVEGGKQ
SIO_010081: SD1D_RS01285
subclass of: SO_0000673
so part of: SD1D_RS01285
location: 268697..271225
location: region:268697-271225:1
so has part: feature:268697-271225:1:exon

WP_058257246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268697-271225:1:exon

SD1D_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01290
old locus tag: SD1D_0262
so part of: sequence
location: 271225..272157
location: region:271225-272157:1
so has part: feature:271225-272157:1:exon
subclass of: SO_0000010

position:272157:1
position: 272157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271225-272157:1:exon

SD1D_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01290
old locus tag: SD1D_0262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010167828.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter permease
translation: MNSENMDKRKKKQKKPKSMAYRNAVSGYLFTAPFTIGFIVFLLMPLLQSLRMAFSTVNFEGGLAYKFVKFENFKYIFTVDPDFITYLVTELWQMFYTIPSIIIFSFFIAIILNQEFKGRGLVRAIFFLPVILSSGVLVGIETNNTLMQGLKEVIADTSNATSITDVVKSLFLSESAYVGPMLNYVFNAVDSIYEIAIASGIQIIIFLSGLQTISPSMFEAAKIEGATAWETFWKITLPMVSSLILVNTIYSIVDFFVRSDNEVMIHIKETMTPALEYGRSSAMAWTYFAIIAVIIGIVSAFISKRVYYYD
SIO_010081: SD1D_RS01290
subclass of: SO_0000673
so part of: SD1D_RS01290
location: 271225..272157
location: region:271225-272157:1
so has part: feature:271225-272157:1:exon

WP_242955235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271225-272157:1:exon

SD1D_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01295
old locus tag: SD1D_0263
so part of: sequence
location: 272150..273193
location: region:272150-273193:1
so has part: feature:272150-273193:1:exon
subclass of: SO_0000010

position:272150:1
position: 272150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273193:1
position: 273193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272150-273193:1:exon

SD1D_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01295
old locus tag: SD1D_0263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006855241.1
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MIKMKNIILKKSNKVKHVKNESLRSFWERNRLSEGYLLKKTIANGTLKFCRAVMLFGLAFLILQPILSKISVSFMEERDLYDATVINIPRNWTLANYELSSKLMNYPKSLISTLLISLLIALVQLASTTLVAYGFARYNFPGKKILFAAVILSIVIPPQTILTALYLNFRYFDVFGIIELIRGKSLNLLNSIWPYVMMSAGCMGLKNGLYIFMLRQYFRGIPKEMEEAAYVDGCGKLKTFLLIMLPDAKPMLTSIFLFAYVWQWTDSFYSSLFLRKYGLLANAVAGLGDNLMTYIQNISNRTAFPSTAYTQAMISTGTLMVIIPLIIIYLVAQKGFVESLAQAGIKM
SIO_010081: SD1D_RS01295
subclass of: SO_0000673
so part of: SD1D_RS01295
location: 272150..273193
location: region:272150-273193:1
so has part: feature:272150-273193:1:exon

WP_242955236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272150-273193:1:exon

SD1D_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01300
old locus tag: SD1D_0264
so part of: sequence
location: 273381..275540
location: region:273381-275540:1
so has part: feature:273381-275540:1:exon
subclass of: SO_0000010

position:273381:1
position: 273381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275540:1
position: 275540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273381-275540:1:exon

SD1D_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01300
old locus tag: SD1D_0264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007048098.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 3 C-terminal domain-containing protein
translation: MQEYKAYLDETLSFEDRAKDLVSRMTLEEKVFQTLHTAAAIERLGVKAYNWWNEALHGVARAGVATVFPQAIGLAATFDEDLLEEIADVISTEGRAKFNAQQKYGDYDIYKGLTFWSPNVNIFRDPRWGRGHETYGEDPYLSSRLGVRFINGIQGKDEKYLKAAACAKHFAVHSGPEDLRHSFNAECSTQDLYETYLPAFKACVQEANVEAVMGAYNRTNGEPCCGSKTLLKDILRDEWGFKGHVVSDCWAIKDFHEYHKVTSTPVESVALAMNNGCDLNCGNIYGNLLMAVRDGLVEEKTIDEAVIRLITTRMKLGLFDNPEKVPFNKIGYDQVDTKEHLELNITAARKSIVLLKNQDKLLPLDKSKIKTIGVIGPNANSRKALVGNYEGTASEYITILEGIKEYVGDDIRVYYSEGCHLFKKAMSGLGMENDRLAEAKTVCDMSDVVIACFGLDPGLEGEEGDQGNEFASGDKPNLNLPGIQEEVLKELYNSGKPIVLVLLSGSALSIPWADEHIPAIVQGWYPGAQGGRAIAQVLFGDYSPEGKLPVTFYRTTEELPEFTDYNMANRTYRYMKNEALYPFGYGLSYTEFELSNVSVDADKIVPGNNVLCTADIKNVGDMPGAETLQVYVKVKQEGAPNWQLKGLKKVYLNPGQLKTVSIELKDTAFGLYDNEGNLVLHEGEYEVFVGTSQPDARSIALTGKKPYSKIMHSDQTVIL
SIO_010081: SD1D_RS01300
subclass of: SO_0000673
so part of: SD1D_RS01300
location: 273381..275540
location: region:273381-275540:1
so has part: feature:273381-275540:1:exon

WP_058257247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273381-275540:1:exon

SD1D_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01305
old locus tag: SD1D_0265
so part of: sequence
location: 275695..277716
location: region:275695-277716:1
so has part: feature:275695-277716:1:exon
subclass of: SO_0000010

position:275695:1
position: 275695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277716:1
position: 277716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275695-277716:1:exon

SD1D_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01305
old locus tag: SD1D_0265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201164.1
GO function: GO:0046559 - alpha-glucuronidase activity [Evidence IEA]
GO process: GO:0045493 - xylan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-glucuronidase family glycosyl hydrolase
translation: MKYNKCWLNFNPINNYGDKEFLTEIIVCTGNKENNSLIIDNAIKELTEALNKMLNIKVDQRILASEDEAATVKSGIILKLTDDSTLKEEGFSIKQIGEAVYIEAKTDKGLLYGSFDLIRRIAQGQSIRGLNITENPKNNFRMLNHWDNMDGSIERGYSGNSFFFENDEIILDERIVDYARLIASVGINATVINNVNVHEAATELITDRYLGKLRTMADIFAGYGIKLYLSANFAAPIELGGLPVSDPLDKDVEEWWKNCIKKVYEYIPHFGGFLIKADSEGRPGPFTYGRTHAEGANLLARILKPYGGILIWRCFVYNCQQDWRDYKTDRARAAYDNFIGLDGEFDDNVILQIKNGPMDFQVREPVSPLFGGLKNTNMILEVQAAQEYTGHQKDVCYLIPMWKEVLDFETYAKKDGSTVADIVSGRAYNQVNCGMAAVSNTGNDYNWTGNDLAASNLYGFGRLAWNTELSSEQIAMEWIKQTFPHEDKVINTVHEILMKSWPVYEKYTSPLGIGWMVNPNNHYGPNVDGYEYDRWGTYHRADRDGMGVDRTVKNGTGYAGQYNEPLASMYENIETCPEELLLFFHYVRYDYKLKTGKTLIQHIYDTHFEGVEEVEKMIEGWKELKGLIPDDVHDRVSARFNMQLENAIEWRDRVNTYFYRKSGVKDEKGRKIF
SIO_010081: SD1D_RS01305
subclass of: SO_0000673
so part of: SD1D_RS01305
location: 275695..277716
location: region:275695-277716:1
so has part: feature:275695-277716:1:exon

WP_058257248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275695-277716:1:exon

SD1D_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: uxuA
locus tag: SD1D_RS01310
old locus tag: SD1D_0266
so part of: sequence
location: 277895..278977
location: region:277895-278977:1
so has part: feature:277895-278977:1:exon
subclass of: SO_0000010

position:277895:1
position: 277895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278977:1
position: 278977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277895-278977:1:exon

SD1D_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: uxuA
locus tag: SD1D_RS01310
old locus tag: SD1D_0266
EC number: 4.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007705081.1
GO function: GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO process: GO:0006064 - glucuronate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannonate dehydratase
translation: MDMTLRWFGKKHDSVKLEYIKQIPGVTGVVSSLHDVPAGEPWKLEDILELKKEVEKAGLKLIGIESVNIHEDIKIGLPSREKYIENYKISLENLGKADVHMVCYNFMPIFDWTRTELAKQLEDGSYVMAYDENIIKGIKPETMFERMEKESGGFILPGWEPNRRDEIMDLFEKYKGVTKEKLMENLKYFLDAIMPVCEKYQIKMALHPDDPAWSVFGLPRIVTSEKALEEIALLNDSIYNGFTLCTGSLGSNLNNNLPQIIRNPKISNRIHFVHLRNMKFESDGVFYESSHLSCDGNFDMYEIVKALYDIGFDGVVRPDHGRMIWDEQARPGYGLYDRALGVAYLNGLWEAIRKNDKSNK
SIO_010081: SD1D_RS01310
subclass of: SO_0000673
so part of: SD1D_RS01310
location: 277895..278977
location: region:277895-278977:1
so has part: feature:277895-278977:1:exon

WP_058257249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277895-278977:1:exon

SD1D_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01315
old locus tag: SD1D_0267
so part of: sequence
location: 279048..280649
location: region:279048-280649:1
so has part: feature:279048-280649:1:exon
subclass of: SO_0000010

position:279048:1
position: 279048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280649:1
position: 280649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279048-280649:1:exon

SD1D_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01315
old locus tag: SD1D_0267
EC number: 1.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004841585.1
GO function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannitol dehydrogenase family protein
translation: MKLINYEASWQEKGYELPKYDRENVKKATKENPTWLHFGAGNIFRGFVAAGLNNMLNEGSYDRGVIVSEGFDYEIIEKAYKPYDDLSLLVILKADGNIEKKVIGSVVESIVADTQREQEWERLKEIYRKPSLQMVSFTITEKGYSLVDSNGEYLAIVAKDFAEGCEKPVHIMGKTTALLYERYKQGELPIALVSMDNCSHNGDKVFEAVEAYAQNWVKNGFVEEGFLNYVRDKNKVAFPWSMIDKITPRPDDKVRKVLEEDGFEDTDLIITSKNTYTAAFVNAEETEYLVIEDTFPNGRPPFEKAGFIFTDRETVDKVEKMKVCTCLNPLHTALAIFGCLLSYETIWEEMKDPQLKELVYRIGYDEGMPVVVNPGVINPEEFIKAVLELRLPNPFMPDAPQRIATDTSQKLPIRFGETIKAYHASDNLKVTDLTFIPLTIAGWCRYLMGIDDQGNPFTPSPDPLLEELQGYVKDVKLGDTELKADLLKPILSNEKIFAVNLYEIGLGSKIEGMFKEMIASSGAVRETLKKYLQ
SIO_010081: SD1D_RS01315
subclass of: SO_0000673
so part of: SD1D_RS01315
location: 279048..280649
location: region:279048-280649:1
so has part: feature:279048-280649:1:exon

WP_058257250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279048-280649:1:exon

SD1D_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01320
old locus tag: SD1D_0268
so part of: sequence
location: 280801..281709
location: region:280801-281709:1
so has part: feature:280801-281709:1:exon
subclass of: SO_0000010

position:280801:1
position: 280801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281709:1
position: 281709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280801-281709:1:exon

SD1D_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01320
old locus tag: SD1D_0268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010966021.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MSYVLQTSNLTRYFGRKAAVNEVSLNVKKGDIYGLIGRNGAGKTTFIRLVAGLAKKNRGEIRLFESGDLNKQRRKIGTMIETPAIYPNLTAKQNLHYYCLLLGIDPVTAIEPMLSLVGLSEAGKKKAKHFSLGMKQRLAIAIALLGDPEFLMLDEPMNGLDPTGVREMRELILKLNKEKKITILISSHILGELSKIATYYGVINNGKLIDEFTLQELKEKCAKSLEISVDDAERAVEILRTNLGIFGDELIVLDSNTIRITKNLHRAALVNTELARNGVSILSSQMINHDMEDFFLKLIMKS
SIO_010081: SD1D_RS01320
subclass of: SO_0000673
so part of: SD1D_RS01320
location: 280801..281709
location: region:280801-281709:1
so has part: feature:280801-281709:1:exon

WP_058257251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280801-281709:1:exon

SD1D_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01325
old locus tag: SD1D_0269
so part of: sequence
location: 281721..282548
location: region:281721-282548:1
so has part: feature:281721-282548:1:exon
subclass of: SO_0000010

position:281721:1
position: 281721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282548:1
position: 282548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281721-282548:1:exon

SD1D_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01325
old locus tag: SD1D_0269
inference: COORDINATES: protein motif:HMM:NF024091.2
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MANLIKSNLYKLFKRKSLYIFSMIYTALSCMSIFILKIADEIRNKTAGASEDMAIKVEGRLSNFNDGLSLGVEFIVNGEALIFLAVFTAMFIAAEFTHGTIKNIASKGFKRKKIYKSIFFSMVVATIIMLGINFIFTTMVGTLVTGSIGIGNIDKLLLFKIIRLVIIEVLLHIAMVSLFVMVTMIFRSSGVAITINLCLLVFGSAYYQFIETIVRYILKTDKELNLINYGIQKNLYLAKATVNGGDIKQPLIVAVVFLITSLIFGTIAFKRSDIR
SIO_010081: SD1D_RS01325
subclass of: SO_0000673
so part of: SD1D_RS01325
location: 281721..282548
location: region:281721-282548:1
so has part: feature:281721-282548:1:exon

WP_058257252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281721-282548:1:exon

SD1D_RS12370
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12370
pseudo: true
so part of: sequence
location: complement(<282734..283077)
location: region:282734-283077:-1
so has part: feature:282734-283077:-1:exon
subclass of: SO_0000010

position:282734:-1
position: 282734
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:283077:-1
position: 283077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282734-283077:-1:exon

SD1D_RS12370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014183868.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF255 domain-containing protein
SIO_010081: SD1D_RS12370
subclass of: SO_0000673
so part of: SD1D_RS12370
location: complement(<282734..283077)
location: region:282734-283077:-1
so has part: feature:282734-283077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282734-283077:-1:exon

SD1D_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01340
old locus tag: SD1D_0272
so part of: sequence
location: 283626..284942
location: region:283626-284942:1
so has part: feature:283626-284942:1:exon
subclass of: SO_0000010

position:283626:1
position: 283626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284942:1
position: 284942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283626-284942:1:exon

SD1D_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01340
old locus tag: SD1D_0272
inference: COORDINATES: protein motif:HMM:NF012907.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysM peptidoglycan-binding domain-containing protein
translation: MIIHVVKEGETVHSIAESYGVSVDRLALENGISSSANLAVGETLVILFPEILYLVQEGDSLSSIAKAHDISIMELLRNNPYLADREYIYPGELMVIKYQDSKVGRITTNGYAYPFIGRNLLKKTLPYLTYISIYSHYYTKDGEVLNLNDAEIIRTARAYGVAPVMILTGLAASPDEEIEVIHNLLTNEEIQDRFLENLMNILRDKDYYGVNITIPYILPQDRSLYKEFIERFATRLREEGYRPFITLTLNTFELLTNITYGDLQYDVLGELVDYIIIITYEWGFAYELPPTVVSFVSFINIAEYIVGLVDPNKLAFGFSTIGYIWRLPYINGVTQGQSISYNGAIDIAREFEAVIHFDDITKASYFQYYSDFEHILRFRDARAIEAIAALAKENNVNGLGIWNIMYFFNQMWLVLNSQFEIEKVLPLNLLEGDNITDG
SIO_010081: SD1D_RS01340
subclass of: SO_0000673
so part of: SD1D_RS01340
location: 283626..284942
location: region:283626-284942:1
so has part: feature:283626-284942:1:exon

WP_058257254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283626-284942:1:exon

SD1D_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: trxA
locus tag: SD1D_RS01345
old locus tag: SD1D_0273
so part of: sequence
location: 285001..285312
location: region:285001-285312:1
so has part: feature:285001-285312:1:exon
subclass of: SO_0000010

position:285001:1
position: 285001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285312:1
position: 285312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285001-285312:1:exon

SD1D_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: trxA
locus tag: SD1D_RS01345
old locus tag: SD1D_0273
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014354906.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin
translation: MASIKITKHNFEKEVLQSKEPVLLDFWASWCGPCRMVSPTIEEIAKETEGVKVGKINIDEESELASQFSVMSIPTLMVLKEGKVAATAVGVRPKKEILKMLQV
SIO_010081: SD1D_RS01345
subclass of: SO_0000673
so part of: SD1D_RS01345
location: 285001..285312
location: region:285001-285312:1
so has part: feature:285001-285312:1:exon

WP_058257255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285001-285312:1:exon

SD1D_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01350
old locus tag: SD1D_0274
so part of: sequence
location: 285425..285811
location: region:285425-285811:1
so has part: feature:285425-285811:1:exon
subclass of: SO_0000010

position:285425:1
position: 285425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285811:1
position: 285811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285425-285811:1:exon

SD1D_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01350
old locus tag: SD1D_0274
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020072227.1
GO function: GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: desulfoferrodoxin family protein
translation: MNKEPKFFICKHCGNIIEKVVDSGVLTVCCGEEMEELVANTVDAAKEKHVPSVTIEDNIVRVEVGEVLHPMEEKHYIMWIYLHTKKGIQRKDLQPGQEPKAVFALEDDEVIAVYEYCNLHGLWKKDIV
SIO_010081: SD1D_RS01350
subclass of: SO_0000673
so part of: SD1D_RS01350
location: 285425..285811
location: region:285425-285811:1
so has part: feature:285425-285811:1:exon

WP_058257256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285425-285811:1:exon

SD1D_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01355
old locus tag: SD1D_0275
so part of: sequence
location: 285930..286604
location: region:285930-286604:1
so has part: feature:285930-286604:1:exon
subclass of: SO_0000010

position:285930:1
position: 285930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286604:1
position: 286604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285930-286604:1:exon

SD1D_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01355
old locus tag: SD1D_0275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009060897.1
GO function: GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MNVKDKYYQEVLRFWKDLTPNQRELVDHSIIKKHFNKGEAMRSSSDQCSGLFLIESGQVRAYIISENGKEITLYRLFDRDVCIFSASCIMKNISFDIFIETEKETTAYLIPTSIFDKLSKESMAVQVFANELMASRFSDVMWIMEQTLFMTLDKRLAIFLLEQSNIEESDTIKITHEKIANHLGSAREVITRMLKYFQEEGIISLSRGTIHIVNRKRLEQLTLY
SIO_010081: SD1D_RS01355
subclass of: SO_0000673
so part of: SD1D_RS01355
location: 285930..286604
location: region:285930-286604:1
so has part: feature:285930-286604:1:exon

WP_058257257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285930-286604:1:exon

SD1D_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01360
old locus tag: SD1D_0276
so part of: sequence
location: 286651..288240
location: region:286651-288240:1
so has part: feature:286651-288240:1:exon
subclass of: SO_0000010

position:286651:1
position: 286651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288240:1
position: 288240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286651-288240:1:exon

SD1D_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01360
old locus tag: SD1D_0276
EC number: 3.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004220378.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MRLTFLGATHEVTGSCFYLEVCGKHILIDCGMEQGRDTFENQELPIPAAGVDAVLLTHAHIDHSGKLPMLYQQGFRGEIHATGATSALCDIMLRDSAHIQMAEAEWRNRKGKRSGEKAYVPLYDMEDALSTIRMFVSHEYNEKFELFEGIEVRFTDVGHLLGSASIEIWVTENGVSKKIVFSGDIGNINQPLINDPQYIKEADYVVMEATYGDRNHEPPPDYVSELAKVIQETLDRGGNLVIPSFAIGRTQVLLYFIRQIKEEGLIKGHDNFKVYIDSPMAIEATNIYEKNIFGYFDKEAMDLIEAGINPIKFPGLKTAITSDESKAINFDDEPKIIISAAGMCDAGRIRHHLKHNLWREDSTILFVGHQAEGSLGRIILDGAQEVKLFGEIVTVKAQIRRLQGISGHADRNGLLKWLAAFEKKPERVFVVHGDAQVCDIFTDYLKDELGYNAYAPYSGTVVNLAKNLVVLEGKPIPVQKKKKAAYVFERLVNAGKRLMLIIQKNKGGTNKDLAKFTDQINALCDKWDR
SIO_010081: SD1D_RS01360
subclass of: SO_0000673
so part of: SD1D_RS01360
location: 286651..288240
location: region:286651-288240:1
so has part: feature:286651-288240:1:exon

WP_058257258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286651-288240:1:exon

SD1D_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01365
old locus tag: SD1D_0277
so part of: sequence
location: complement(288323..288952)
location: region:288323-288952:-1
so has part: feature:288323-288952:-1:exon
subclass of: SO_0000010

position:288323:-1
position: 288323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288952:-1
position: 288952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288323-288952:-1:exon

SD1D_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01365
old locus tag: SD1D_0277
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015359965.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MSKKLTEIIFLLDRSGSMTGLESDTIGGFNSFIKKQCALGPTRLTTILFDNKYELLHNGVDANTVYLTEKEYYTRNSTALLDAIGKAILDVNFRLSHLDKEEYPGKVIFVITTDGLENASTEFTYDKIRQMISKQEEIYNWQFIFMGANLDVAKESHKLGIHPSMSFSFQSTSPGTKQMYNKIDHVVKEIRLNQFKKEHDPLSNSSANQ
SIO_010081: SD1D_RS01365
subclass of: SO_0000673
so part of: SD1D_RS01365
location: complement(288323..288952)
location: region:288323-288952:-1
so has part: feature:288323-288952:-1:exon

WP_058257259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288323-288952:-1:exon

SD1D_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01370
old locus tag: SD1D_0278
so part of: sequence
location: 289073..289696
location: region:289073-289696:1
so has part: feature:289073-289696:1:exon
subclass of: SO_0000010

position:289073:1
position: 289073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289696:1
position: 289696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289073-289696:1:exon

SD1D_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01370
old locus tag: SD1D_0278
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKQLLLELEAYIENNRLDDLFFRETVTYNYIMPMKSAYKKEDKKREAKEVNEEAQDDKAWLVRFRKNSLSEDDYGLISKENEIEQYISKEKSEETFSIKLLQHIDRLGLKDAEIYKKAGIDRRHFSKIRCDVNYKPKKSTAIALCIALELNLKESIELLQLAGYSLSNCDIGDLVIKFFIERKIYDLTIVNEALDYYGQKMVGVVG
SIO_010081: SD1D_RS01370
subclass of: SO_0000673
so part of: SD1D_RS01370
location: 289073..289696
location: region:289073-289696:1
so has part: feature:289073-289696:1:exon

WP_058257260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289073-289696:1:exon

SD1D_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01375
old locus tag: SD1D_0279
so part of: sequence
location: 289730..290089
location: region:289730-290089:1
so has part: feature:289730-290089:1:exon
subclass of: SO_0000010

position:289730:1
position: 289730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290089:1
position: 290089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289730-290089:1:exon

SD1D_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01375
old locus tag: SD1D_0279
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008716602.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YccF domain-containing protein
translation: MGCLGNAIWFICGGFLTGLSWLIAGCLWCMTIIGIPIGIQCFKFAGLCFFPFGKEVEYGGGAGSLLMNIIWLLITGIPLAIESALFGLLMCITIIGIPFGLQHFKIAKLALMPFGATVR
SIO_010081: SD1D_RS01375
subclass of: SO_0000673
so part of: SD1D_RS01375
location: 289730..290089
location: region:289730-290089:1
so has part: feature:289730-290089:1:exon

WP_058257261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289730-290089:1:exon

SD1D_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01380
old locus tag: SD1D_0280
so part of: sequence
location: 290118..291029
location: region:290118-291029:1
so has part: feature:290118-291029:1:exon
subclass of: SO_0000010

position:290118:1
position: 290118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291029:1
position: 291029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290118-291029:1:exon

SD1D_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01380
old locus tag: SD1D_0280
EC number: 2.3.1.-
inference: COORDINATES: protein motif:HMM:NF024917.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MNRKNKELYKEEIFIKGEKYYFVKDYEENEEYRQSFNRLTEKVFGFNLESWYKKGYWTDKYSPHSLLYKGNIVANVSVNTMEFSLFDKGVKVIQLGTVMTDPEFRNGGLSRTLMEFVLSDIKERYDLVYLYGNNTVTDFYPKFGFVKSKEYVHWGVFKKEGINASFYKLDIKNEKDRKILIRLVKNTIPISKISMLNNMELIMFYLDSFMADNIYYSREMDLAAIIEYGEGELLLVDIFSANDFNLEELIPSLLKEEMMKVTLGFTPRNDRGFQIEAIEGDDTFFVLNKSLNIAGRFPMLSHT
SIO_010081: SD1D_RS01380
subclass of: SO_0000673
so part of: SD1D_RS01380
location: 290118..291029
location: region:290118-291029:1
so has part: feature:290118-291029:1:exon

WP_058257262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290118-291029:1:exon

SD1D_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01385
old locus tag: SD1D_0281
so part of: sequence
location: 291316..291957
location: region:291316-291957:1
so has part: feature:291316-291957:1:exon
subclass of: SO_0000010

position:291316:1
position: 291316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291957:1
position: 291957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291316-291957:1:exon

SD1D_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01385
old locus tag: SD1D_0281
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004850749.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEQRAIKIHSSENKKVKLKVIPGHFATSHSHVNHYIDLTTTKTRLSEASETAQVMAKQYVNNVVIDTIVCLDNCDVIGAFLANELTIAGIRSLNAHQTMYIISPEFNTNGQMIFRDCNQPAVYNKNILLLVASATTGDTIRRSLDCIRYYGGIVNGISAIFSAVDQVEGMKVNSIFRSEDLPNYQSYSINECPLCKKGHRLEGIVNGYGYMRL
SIO_010081: SD1D_RS01385
subclass of: SO_0000673
so part of: SD1D_RS01385
location: 291316..291957
location: region:291316-291957:1
so has part: feature:291316-291957:1:exon

WP_058257263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291316-291957:1:exon

SD1D_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01390
old locus tag: SD1D_0282
so part of: sequence
location: complement(292012..292890)
location: region:292012-292890:-1
so has part: feature:292012-292890:-1:exon
subclass of: SO_0000010

position:292012:-1
position: 292012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292890:-1
position: 292890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292012-292890:-1:exon

SD1D_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01390
old locus tag: SD1D_0282
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002591715.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ROK family protein
translation: MIIGALEAGGTKMVCAIGHENGKIIKRTVIPTETVDTTMPKLINFFLNEGIEALGIGCFGPIDPDINSKTYGYITSTPKLPWRNFNIVKAFYEALKVPIGFDTDVNGAALGEGTWGALQGCEVSLYITIGTGVGVGVCIHGKPLHGLMHPEAGHIILRRLSHDTYKGNCPYHSDCLEGLASGPAIEGRWGKKAYELEDNYKVWDLESHYIAQALANFILCYSPNRIVLGGGVMKQKQLFPLIRAKVREYLGDYISLAKINDNIENYIVPPALGDNSGIMGALRLGYQAYLSF
SIO_010081: SD1D_RS01390
subclass of: SO_0000673
so part of: SD1D_RS01390
location: complement(292012..292890)
location: region:292012-292890:-1
so has part: feature:292012-292890:-1:exon

WP_058257264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292012-292890:-1:exon

SD1D_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: spoIIID
locus tag: SD1D_RS01395
old locus tag: SD1D_0283
so part of: sequence
location: 293067..293327
location: region:293067-293327:1
so has part: feature:293067-293327:1:exon
subclass of: SO_0000010

position:293067:1
position: 293067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293327:1
position: 293327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293067-293327:1:exon

SD1D_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: spoIIID
locus tag: SD1D_RS01395
old locus tag: SD1D_0283
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016292768.1
GO function: GO:0140110 - transcription regulator activity [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sporulation transcriptional regulator SpoIIID
translation: MKGYIEERAVEIANYIIENNATVRQTAKQFGISKSTVHKDVTERLLQINPSLASRARVVLDRNKSERHIRGGLATKEKYLQKAKYN
SIO_010081: SD1D_RS01395
subclass of: SO_0000673
so part of: SD1D_RS01395
location: 293067..293327
location: region:293067-293327:1
so has part: feature:293067-293327:1:exon

WP_058257265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293067-293327:1:exon

SD1D_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rsxC
locus tag: SD1D_RS01400
old locus tag: SD1D_0284
so part of: sequence
location: 293525..294838
location: region:293525-294838:1
so has part: feature:293525-294838:1:exon
subclass of: SO_0000010

position:293525:1
position: 293525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294838:1
position: 294838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293525-294838:1:exon

SD1D_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rsxC
locus tag: SD1D_RS01400
old locus tag: SD1D_0284
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198241.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transport complex subunit RsxC
translation: MARLTFPGGIHTYDGKKLSKDKPISAILPKGDLVFPLSQHIGTPAKPLVAKGDTVLVGQKIAEASDGISAHVISSVSGTVKAIEKRLTPTGKMVESIVITNDGEYKKIEGFGQDRDYSKMSKSEIRQAVKEAGIVGLGGAGFPTHIKLTPKDENKIDYVIVNGAECEPYLTSDYRLMMEAGEIILGGLKILLRLFDKAEGIIAIEDINPDVIKKFQELTAKETNIKVKILKTKYPQGGERQLVYATTGRKLNSKKIPADLGCIVNNVGTVAAIYMAVAKSTPLTHRIVTVSGDAIAEPQNFYVPLGINFSEIIEAAKGFTAQPKKIIIGGPMMGTSVYTHDLPVTKTSSTLLAFIKDEAAVEESACIRCGKCHEHCPLNLLPIKLQMAAIHNEYEKFKKLDGMECCGCGCCSYVCPAKRSLTQSIVQTKQRILKENK
SIO_010081: SD1D_RS01400
subclass of: SO_0000673
so part of: SD1D_RS01400
location: 293525..294838
location: region:293525-294838:1
so has part: feature:293525-294838:1:exon

WP_058257266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293525-294838:1:exon

SD1D_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01405
old locus tag: SD1D_0285
so part of: sequence
location: 294906..295901
location: region:294906-295901:1
so has part: feature:294906-295901:1:exon
subclass of: SO_0000010

position:294906:1
position: 294906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295901:1
position: 295901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294906-295901:1:exon

SD1D_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01405
old locus tag: SD1D_0285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015554661.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RnfABCDGE type electron transport complex subunit D
translation: MNDFYNVSAAPHIRSPITTKSIMQDVVIALIPASLFGIFNFGLRALLVILATVLSCVLTEYIYCRLMKKPVNPGDYSDVVTGLLLALNLPVDIPIWIAVLGGVFAILIVKMLFGGLGQNFMNPALAARVFLLISFPTKVASFALDKVTSPGIKDFLRDGALVLDGVSGATPLGQLKAGESVDLLKLFVGHVGGSIGETSTLALLIGAAYLLYRKVISLRIPLSYILSFAVFVLVFGGKGFDPNFILGQVLGGGLILGAFFMATDYVTSPATPKGQILFGIFLGIMTGLFRIVGNGVEGVSYAIILGNLLVPMIDNVTGPKTFGKERVKDGK
SIO_010081: SD1D_RS01405
subclass of: SO_0000673
so part of: SD1D_RS01405
location: 294906..295901
location: region:294906-295901:1
so has part: feature:294906-295901:1:exon

WP_058257267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294906-295901:1:exon

SD1D_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01410
old locus tag: SD1D_0286
so part of: sequence
location: 295891..296538
location: region:295891-296538:1
so has part: feature:295891-296538:1:exon
subclass of: SO_0000010

position:295891:1
position: 295891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296538:1
position: 296538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295891-296538:1:exon

SD1D_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01410
old locus tag: SD1D_0286
inference: COORDINATES: protein motif:HMM:NF016121.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FMN-binding protein
translation: MANKNENKSTILKDALSLTFITIICSFALAFVYEITKAPIAAQEDAKKNAGYKVVYKDAKELSTHEELVKLAAETDISSLDASYAGVTIEDVVRALDENKNPIGYIITSRTRGYASTIKVAVGYSLDGVVQGMELLEIADSPGYGANANTPEFKDKFAGVKTDQFIVTKGGAKEDNEIDVVSSSTTTTEAVVRAVNGGLGFLLEYAEGLGGASNE
SIO_010081: SD1D_RS01410
subclass of: SO_0000673
so part of: SD1D_RS01410
location: 295891..296538
location: region:295891-296538:1
so has part: feature:295891-296538:1:exon

WP_058257268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295891-296538:1:exon

SD1D_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01415
old locus tag: SD1D_0287
so part of: sequence
location: 296531..297208
location: region:296531-297208:1
so has part: feature:296531-297208:1:exon
subclass of: SO_0000010

position:296531:1
position: 296531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297208:1
position: 297208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296531-297208:1:exon

SD1D_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01415
old locus tag: SD1D_0287
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009536615.1
GO process: GO:0022900 - electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transport complex subunit E
translation: MNKYIERLTNGLFKENPTFVLMLGMCPTLAVTTSAMNALGMGLSTAVVLIAANVVIAALRKFIPDRVRMPYFIVVVASMVTIVELLLKAYLPEVSEALGIYIPLIVVNCIIFGRVEAYAAKNKVGLSLFDGIGMGLGFTMALVLIGAFRELLGAGTLFNIRIMPESFEPIIMIKEAPGAFLVLAMLTALQNKFKLPSATNGNVKKSALACGGDCANCSSEGRGND
SIO_010081: SD1D_RS01415
subclass of: SO_0000673
so part of: SD1D_RS01415
location: 296531..297208
location: region:296531-297208:1
so has part: feature:296531-297208:1:exon

WP_058257269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296531-297208:1:exon

SD1D_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rsxA
locus tag: SD1D_RS01420
old locus tag: SD1D_0288
so part of: sequence
location: 297209..297799
location: region:297209-297799:1
so has part: feature:297209-297799:1:exon
subclass of: SO_0000010

position:297209:1
position: 297209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297799:1
position: 297799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297209-297799:1:exon

SD1D_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rsxA
locus tag: SD1D_RS01420
old locus tag: SD1D_0288
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012739175.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0022900 - electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transport complex subunit RsxA
translation: MNADYFMNLLSVFISAALINNVILSQFLGICPFLGISNKVKTATGMGLAVMFVITTSSIMCSLIYDFILNPLDLGYLNTIVFIIVIACLVQFVEMVIKKFSPALYESLGVYLPLITTNCAVLGVAILNVEQGFDLVESIVNGFASALGFTIAIILMAGIRERMEYNDIPKVFKGFPITLITATLMAMAFYGFSGLS
SIO_010081: SD1D_RS01420
subclass of: SO_0000673
so part of: SD1D_RS01420
location: 297209..297799
location: region:297209-297799:1
so has part: feature:297209-297799:1:exon

WP_242955237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297209-297799:1:exon

SD1D_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01425
old locus tag: SD1D_0289
so part of: sequence
location: 297815..298645
location: region:297815-298645:1
so has part: feature:297815-298645:1:exon
subclass of: SO_0000010

position:297815:1
position: 297815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298645:1
position: 298645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297815-298645:1:exon

SD1D_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01425
old locus tag: SD1D_0289
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003507363.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RnfABCDGE type electron transport complex subunit B
translation: MFLSIAATSFDIKSLILATVVVSVIGLLIGLFLGLASKKLEVPVDEKEAKVRELLPGANCGGCGYAGCDACAKAIANQEAAADVCPVASSDIHVEIAKLMGSSVDTTEKQVAYVKCAGTCDKAKKNSNYYGPKDCKLAAGIGGNGSKGCSYGCMGFGSCVKVCAFDAIHIVDGIALVDKEKCTACGMCVAECPINIIEMVPKKAKTLVACSSLDKGKDVKPVCSTGCIGCKLCTKACQFDAIHVENNLAKIDYSKCTNCGACVKVCPVKVIQQQSA
SIO_010081: SD1D_RS01425
subclass of: SO_0000673
so part of: SD1D_RS01425
location: 297815..298645
location: region:297815-298645:1
so has part: feature:297815-298645:1:exon

WP_058257270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297815-298645:1:exon

SD1D_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01430
old locus tag: SD1D_0290
so part of: sequence
location: complement(298739..300010)
location: region:298739-300010:-1
so has part: feature:298739-300010:-1:exon
subclass of: SO_0000010

position:298739:-1
position: 298739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300010:-1
position: 300010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298739-300010:-1:exon

SD1D_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01430
old locus tag: SD1D_0290
inference: COORDINATES: protein motif:HMM:NF024242.2
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MKTPNVNSKNNIDLDKEFWDSLHTEIIKANQDFTQKDLFSYLEKSFVFSLFFRGASHKELSIIRNLLKLKDLGYLILLEFLPQDRTNIIDFDIDELALYYLIKDELKDYTTAIGPMIYNRISILITDGPNALAPGLDTKTNSLCITSKLINTLQKKFQIEIIGGVGNVQSIHSIYTSYLEAMSCLYYCSPGEAIHVQDLNELEAQQVYEYKEAEKHMMNSVRHRKSDAYDYFALMMNKIRHLSDNAKRNKIIEALVLATHAARIDGMDEADYFNYTYHIDAFMELKGDQLIEWAFQKFVDITGLVKSNNVIDYSNKIVQATKEYLENHYADEISLEDVAEYVNMSPQYFSKLIKKNTGFNFIDWLSMLRVKKAKELLTNSNLTVKEVCFLVGYKDPNYFSRIFKKKIGMTPSEYIKNRNQLAP
SIO_010081: SD1D_RS01430
subclass of: SO_0000673
so part of: SD1D_RS01430
location: complement(298739..300010)
location: region:298739-300010:-1
so has part: feature:298739-300010:-1:exon

WP_058257271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298739-300010:-1:exon

SD1D_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01435
old locus tag: SD1D_0291
so part of: sequence
location: 300290..302512
location: region:300290-302512:1
so has part: feature:300290-302512:1:exon
subclass of: SO_0000010

position:300290:1
position: 300290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302512:1
position: 302512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300290-302512:1:exon

SD1D_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01435
old locus tag: SD1D_0291
inference: COORDINATES: protein motif:HMM:NF012311.2
GO function: GO:0008236 - serine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S8 family serine peptidase
translation: MRVKSKYIKIITFIFPILLGIIIVIIKNSIYYKQDKDIIENDNNELIVLFNRKLEEQELSKLLDGFDNNAKITQHFGDYGLVSVDNKEIYQDLVKKLKKDPLVKVVQANGKVEAMQVTNDTYAANQWAIHNPGSYLLFSSNGNKEIFAKKDIDMDVAEAWRYLAAEKIGRRQVVVAIIDTGVDYTHPDLTKNIWINENEIAGDGIDNDNNGFVDDIYGWDFYNDDDSVCHYKYDSKSKSNLALPEDNDDHGTHIAGIIGAVADNGIGIAGIASKIDIKLMVLKINGGRDGTGSISDAILAIKYATMMGADICNISWGTDQNSPALKEVIKESDMLFVAAAGNQGLNNDHKPVYPASYKLDNLISVTFIDAFGRLTRLSNYGKKSVDIAAPGSDILSTAVGSYKTLSGSSMAVPQVSAVAALLYSYNENIYPQRVKELLLKTIKPVSELKGSIRYPGIVSAYKALLSIRDLRKDKSVPTIKLSTLYDKGNLIIDVKAKDEGGAGVRVIRWLTGKRDIKDFSRGTKGQAVKNNQVKVSKAGVYSFYISDYAGNEFVRHYKVTDDKTSPIISAGFTVSGDYKTRTINIRVRDSQSGIKRVKYLSGKRQIEDFMPAASGKEIKLNNERGFFNVKKDGFYTIYAIDHRGNQRIKIIEVKTIKSEDVKFTRSEKTMTIGDTYILRAFVKPATTTDLITYNSSHKDIVSVDNKGKLKALKEGEAIITARTSNGFTAVCKIVVVAADP
SIO_010081: SD1D_RS01435
subclass of: SO_0000673
so part of: SD1D_RS01435
location: 300290..302512
location: region:300290-302512:1
so has part: feature:300290-302512:1:exon

WP_058257272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300290-302512:1:exon

SD1D_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpmG
locus tag: SD1D_RS01440
so part of: sequence
location: 302704..302853
location: region:302704-302853:1
so has part: feature:302704-302853:1:exon
subclass of: SO_0000010

position:302704:1
position: 302704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302853:1
position: 302853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302704-302853:1:exon

SD1D_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpmG
locus tag: SD1D_RS01440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013271142.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L33
translation: MRVKITLACTDCKQRNYNMTKEKKLYPDRMETKKYCKFCRTHTLHKETK
SIO_010081: SD1D_RS01440
subclass of: SO_0000673
so part of: SD1D_RS01440
location: 302704..302853
location: region:302704-302853:1
so has part: feature:302704-302853:1:exon

WP_087758717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302704-302853:1:exon

SD1D_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: secE
locus tag: SD1D_RS01445
old locus tag: SD1D_0292
so part of: sequence
location: 302879..303091
location: region:302879-303091:1
so has part: feature:302879-303091:1:exon
subclass of: SO_0000010

position:302879:1
position: 302879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303091:1
position: 303091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302879-303091:1:exon

SD1D_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: secE
locus tag: SD1D_RS01445
old locus tag: SD1D_0292
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004842372.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecE
translation: MSEMAGKVTDKAPKKSWFKSMKSEFKKIVWPDRLTLTKQTVAVVIVTILLGIIIYLLDYVIELGIGFILG
SIO_010081: SD1D_RS01445
subclass of: SO_0000673
so part of: SD1D_RS01445
location: 302879..303091
location: region:302879-303091:1
so has part: feature:302879-303091:1:exon

WP_058257273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302879-303091:1:exon

SD1D_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: nusG
locus tag: SD1D_RS01450
old locus tag: SD1D_0293
so part of: sequence
location: 303102..303623
location: region:303102-303623:1
so has part: feature:303102-303623:1:exon
subclass of: SO_0000010

position:303102:1
position: 303102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303623:1
position: 303623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303102-303623:1:exon

SD1D_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: nusG
locus tag: SD1D_RS01450
old locus tag: SD1D_0293
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201689.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination protein NusG
translation: MSEANWYVVHTYSGYENKVKANIEKMIENRRLQDQILEVSVPMKEVIEVKNGVKKRVQKKMFPGYVLIHMVMNDDVWYVVRNTRGVTGFVGPDSKQPVPLTEAEMRNMGIMKDDIVVDFEVGDTVTVMNGVWENTTGVIKAINPHKQIVTISVELFGRETPVEISFSDVKIQK
SIO_010081: SD1D_RS01450
subclass of: SO_0000673
so part of: SD1D_RS01450
location: 303102..303623
location: region:303102-303623:1
so has part: feature:303102-303623:1:exon

WP_058257274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303102-303623:1:exon

SD1D_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplK
locus tag: SD1D_RS01455
old locus tag: SD1D_0294
so part of: sequence
location: 303761..304186
location: region:303761-304186:1
so has part: feature:303761-304186:1:exon
subclass of: SO_0000010

position:303761:1
position: 303761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304186:1
position: 304186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303761-304186:1:exon

SD1D_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplK
locus tag: SD1D_RS01455
old locus tag: SD1D_0294
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007869559.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11
translation: MAKKVTGYIKLQIPAGKATPAPPVGPALGQHGVNIVQFTKEFNARTADQDGMIIPVIITVYADRSFSFVTKTPPAAVLLKKTLNLKSGSAVPNKNKVAKISKADLQKIAEIKMPDLNAADIDAAMRMIAGTARSMGIEVED
SIO_010081: SD1D_RS01455
subclass of: SO_0000673
so part of: SD1D_RS01455
location: 303761..304186
location: region:303761-304186:1
so has part: feature:303761-304186:1:exon

WP_058257275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303761-304186:1:exon

SD1D_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplA
locus tag: SD1D_RS01460
old locus tag: SD1D_0295
so part of: sequence
location: 304353..305045
location: region:304353-305045:1
so has part: feature:304353-305045:1:exon
subclass of: SO_0000010

position:304353:1
position: 304353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305045:1
position: 305045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304353-305045:1:exon

SD1D_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplA
locus tag: SD1D_RS01460
old locus tag: SD1D_0295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009001661.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L1
translation: MKRGKKYLNAAKAIDRNTLYDAEEAISLVKQSAVAKFDETIEAHIRLNVDGRHADQQVRGAVVLPHGTGKTVRVLVFAKGDKVAEAEAAGADFVGGDELIPKIQNDGWLDFDVVVATPDMMGVVGRLGRVLGPKGLMPNPKAGTVTMDVAKAVKDIKAGKIEYRLDKTNIIHVPIGKASFTEEQLNDNFQTLMGAIIKAKPAAAKGQYLRSVTLASTMGPGVKLNTAKLS
SIO_010081: SD1D_RS01460
subclass of: SO_0000673
so part of: SD1D_RS01460
location: 304353..305045
location: region:304353-305045:1
so has part: feature:304353-305045:1:exon

WP_058257276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304353-305045:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 1679721
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00557
inference: COORDINATES: profile:INFERNAL:1.1.4
note: ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 305103..305240
location: region:305103-305240:1
so has part: feature:305103-305240:1:region

position:305103:1
position: 305103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305240:1
position: 305240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305103-305240:1:region

SD1D_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplJ
locus tag: SD1D_RS01465
old locus tag: SD1D_0296
so part of: sequence
location: 305274..305759
location: region:305274-305759:1
so has part: feature:305274-305759:1:exon
subclass of: SO_0000010

position:305274:1
position: 305274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305759:1
position: 305759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305274-305759:1:exon

SD1D_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplJ
locus tag: SD1D_RS01465
old locus tag: SD1D_0296
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004850621.1
GO component: GO:0015934 - large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L10
translation: MAKVELKQPIVEEIKGYAKDAHAIVLVDYRGLTVAEDTELRKKLREAGVVYKVYKNTLLNFAFQGTEYEALSKDLEGPTAVAFGIDDVTAPARIINDLAKKMPKLEFKSGVVEGVYYDKEGIKEIAAIPSREVLISKLLGSLQSPIANLARVLKQIAEKAA
SIO_010081: SD1D_RS01465
subclass of: SO_0000673
so part of: SD1D_RS01465
location: 305274..305759
location: region:305274-305759:1
so has part: feature:305274-305759:1:exon

WP_058257277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305274-305759:1:exon

SD1D_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplL
locus tag: SD1D_RS01470
old locus tag: SD1D_0297
so part of: sequence
location: 305848..306219
location: region:305848-306219:1
so has part: feature:305848-306219:1:exon
subclass of: SO_0000010

position:305848:1
position: 305848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306219:1
position: 306219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305848-306219:1:exon

SD1D_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplL
locus tag: SD1D_RS01470
old locus tag: SD1D_0297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201685.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L7/L12
translation: MTTQEFIEAIKGLTVLELNELVKACEEEFGVSAAAGVVVAAGGAAAGGAAEEEKSEFDVELTEVGPNKVKVIKVVRDITGLGLKEAKDLVDNAPKMVKEGVSKAEADDMKAKLEAEGAKVTLK
SIO_010081: SD1D_RS01470
subclass of: SO_0000673
so part of: SD1D_RS01470
location: 305848..306219
location: region:305848-306219:1
so has part: feature:305848-306219:1:exon

WP_058257278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305848-306219:1:exon

SD1D_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01475
old locus tag: SD1D_0298
so part of: sequence
location: 306654..310520
location: region:306654-310520:1
so has part: feature:306654-310520:1:exon
subclass of: SO_0000010

position:306654:1
position: 306654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310520:1
position: 310520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306654-310520:1:exon

SD1D_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01475
old locus tag: SD1D_0298
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016287793.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: MDRNRMHPVKVGNNVRMSYSKQKEVLEMPNLIEVQKDSYQWFLTEGLKEVFDDISPITDYGGNLSLEFVDFTLCEDDIKYTIEECKERDATYAAPLKVKVRLHNKENNEINEHDIFMGDLPLMTETGTFVINGAERVIVSQLVRSPGIYYAVDHDKIGKKLFSATVIPNRGAWLEYETDSNDVFYVRVDRNRKVPITTFIRALGYGTNEEIKQLFGEEPKILASLAKDPSTARDPSGSYQDGLLELYKKLRPGEPLAVENAEALLNSMFFDARRYDLAKVGRYKFNKKLAYRNRIVGFVLAEDVVDKSTGEVIAEAGTTVSNELAMIIQDSAIPSVMVQADERNVKVISNMMVNLSYYLPEISVAEKKSMGLNEYVYYPVLKKILENHTSLEDIKEALRKNISDLVPKYITKEDIIASINYNINLEYGIGYIDDIDHLGNRRIRAVGELLQNQYRIGLSRMERVVRERMTTQDLEGISPQSLINIKPVTAAVKEFFGSSQLSQFMDQHNPLGELTHKRRLSALGPGGLSRDRAGFEVRDVHYSHYGRMCPVETPEGPNIGLINSLATYARINEYGFIEAPYRVVDKADPENPKVTDEVIYLTADEEDRYVVAQANAELDENGYFIGNSISGRYKEETSQYDKQQIDLMDVSPKMVFSVATSLIPFLENDDANRALMGANMQRQAVPLLKTEAPVVGTGIEAKAAIDSGVCVLAKKSGTVEKVTAREILVKNDDGSKSTYRLIKFSKSNQGTCINQRPVVNWGDRVEAGQVIADGPSTSKGELALGKNPLIGFMTWEGYNYEDAVLISERLVQEDVYTSIHIEEYEAEARDTKLGPEEITRDIPGVGDEALKDLDERGIIRIGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEYGIVVDAKVFTRENGDELSPGVNETVRVYIAQKRKIQVGDKMAGRHGNKGVVSRVLPVEDMPFLPNGRPLDIVLNPLGVPSRMNIGQVLEIHLSLAAKVLGIDVATPVFDGANEFDIMDTLKIANDYANLEWEEFEEKYKDNINPYLFDYLKEHHGENNEWKGVPINSDGKIMLRDGRTGEFFDQPVTVGFMHYLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYILQEILTVKSDDVTGRVKTYEAIIKGENISEPGIPESFKVLLKELQSLALDVTVLDEYGNEVRLTENSEYGDSDMTQLIEGDNNFRYDEEGYEDAGFTKTEGEDIDNDIFDIYEEDSGEVEQQDDFSFD
SIO_010081: SD1D_RS01475
subclass of: SO_0000673
so part of: SD1D_RS01475
location: 306654..310520
location: region:306654-310520:1
so has part: feature:306654-310520:1:exon

WP_058257279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306654-310520:1:exon

SD1D_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpoC
locus tag: SD1D_RS01480
old locus tag: SD1D_0299
so part of: sequence
location: 310580..314419
location: region:310580-314419:1
so has part: feature:310580-314419:1:exon
subclass of: SO_0000010

position:310580:1
position: 310580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314419:1
position: 314419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310580-314419:1:exon

SD1D_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpoC
locus tag: SD1D_RS01480
old locus tag: SD1D_0299
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201681.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MPDIMYNNEQEITYDAIRIGLASPEKIREWSRGEVRKPETINYRTLKPEKDGLFCERIFGPSKDWECHCGKYKKIRYKGVVCDRCGVEVTKASVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDLSPRTLEKVLYFASYIVLDKGNTDLQYKQVLNEKEKQEAIEKYGEGSFRVGMGAEAVQELLRNIDLDKEVKDLKRALKDSTGQKRARIIKRLEVVEAFRESGNKPEWLILTVIPVIPPDLRPMVQLDGGRFATSDMNDLYRRIINRNNRLKRLLELGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLYQCGLPKEMAIELFKPFVMKELVARGTAHNIKSAKKMVERLQPEVWDVLEDVIKEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAECRFLLLSPNNLLKPSDGAPVTVPSQDMVLGIYYLTIERENDTGILHSFKSVDEAILAYENKTITLHEPILVKMTGINNEGVEESKMIKSTLGRFVFNEIIPQDLGFVDRSKPENFLELEINFLVGKKQLKPILEKCINIHGATQTAELLDAVKTLGYKYATRAAFTVSISDMKVPEEKKQILAEAEETVESISKEYRRGRMTEEERYNAVINTWKEADNELTETLLAGLDRFNNIKMMSDSGARGSDKQIKQLAGMRGLMADTSGRTIELPIKSNLREGLDVLEYFISAHGARKGLSDTALRTADSGYLTRRLVDVAQDLIIREADCCEHEEEITGMWVKAFTDGSEVIETLEERITGRFSCETIYDAEGNIIVKANHMITPKRAAKIIETGVDKVKIRNVLSCKSHIGVCAKCYGANLATGEAVQVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEELFEARKPKGLAIISEFGGTVTIKDTKKKREVIVTNPETMESKAYLIPYGSRIKVMEGDIIEAGDELTEGSVNPHDILKIKGVRAVQDYMIQEVQRVYRLQGVEINDKHIEVIVRQMLKKVRIEDNGDTNFLPGALVDIMEFNDVNKAMEEQGLQPAEGKQVMLGITKASLATNSFLSAASFQETTKVLTEAAIKGKVDPLIGLKENVIIGKLIPAGTGMKRYRSVKLDTDIQEESLMAADMYPEGSYSQDFETLEYPENQDQGDNYVEDGIPEVVYDEEKYTSGDNYIGREDSKPGVDDAHISLGEETHNDGDWTETEFNLKGIIEDDYSDGL
SIO_010081: SD1D_RS01480
subclass of: SO_0000673
so part of: SD1D_RS01480
location: 310580..314419
location: region:310580-314419:1
so has part: feature:310580-314419:1:exon

WP_087758718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310580-314419:1:exon

SD1D_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01485
old locus tag: SD1D_0300
so part of: sequence
location: 314540..316255
location: region:314540-316255:1
so has part: feature:314540-316255:1:exon
subclass of: SO_0000010

position:314540:1
position: 314540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316255:1
position: 316255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314540-316255:1:exon

SD1D_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01485
old locus tag: SD1D_0300
EC number: 5.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015561271.1
GO function: GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospho-sugar mutase
translation: MGYLEMYNEWLTNPYFDEDTRNELKALEGNDKEIKERFFKNLEFGTGGLRGILGAGINRMNIYTVRKATQGLANYIIKQKGESKGVVIAYDSRRMSPEFAMETALCLAANKIKAYLFDSLRPTPMLSFAVRELACIAGVVITASHNPPEYNGYKVYWEDGAQITYPKDVEIIQEVNAITDFAAAKTMTKEEAIKEGLLKIIGQEIDDRYIESLKALTINPISEEGKKLTIVYTPLHGSGNMPVQRILRELGFSNVYVVSEQEQPDSNFSTVEYPNPEDPKVFTLAKELADKVGADIILATDPDADRLGVQVKNNKGEYVLFNGNMTGALIAEYVFSQKAAKGILPKNSALIKTIVTGNISDKIAEHYNAKLIEVLTGFKYIGEQIKLFEETGSNEFIFGYEESYGYLVGTHSRDKDAVVSLMILCEACAYYKSQGISLYEQMENIFKKYGYYQEETVAITLKGIEGMEKIKSIMENYRKNSPKTAGGYEILKIRDYEADTITDLKTGEVKPTNLPKSNVLYYEMSEDAWCAIRPSGTEPKIKFYFGVKGESKEDASRRLSRLMNDEVFKVN
SIO_010081: SD1D_RS01485
subclass of: SO_0000673
so part of: SD1D_RS01485
location: 314540..316255
location: region:314540-316255:1
so has part: feature:314540-316255:1:exon

WP_058257280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314540-316255:1:exon

SD1D_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01490
old locus tag: SD1D_0301
so part of: sequence
location: complement(316359..317354)
location: region:316359-317354:-1
so has part: feature:316359-317354:-1:exon
subclass of: SO_0000010

position:316359:-1
position: 316359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317354:-1
position: 317354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316359-317354:-1:exon

SD1D_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01490
old locus tag: SD1D_0301
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKSKIILLIYLTCIMFSACSSKDSSSKDSSINQTPSTPAKEDVSDLQQNDSKVYRFSWGYDVFRPGEEMGIYQEEGQLVRSTVYKGGELPLGVSIFINKDDSEPINFGLLVLVDGLPVEFTPEGERQATYMHPFQVIKDTICKFTLTPTFQSEAGRIDIIIAADLMNIQGDTAVLPLYVDNQSGEYNNKNSNNPVHVLSIPSDFQASPQSGDAHIPCWIYQADTDESMHTGQSATNRINLSSDGNEWLYESTTGLPGELRTIFFLDYKPYIVLNDKPYVDWSPSYGEMLSLPITFSDIEDSSIFMPVTIRMDDTDMKHQTLILRRFLINP
SIO_010081: SD1D_RS01490
subclass of: SO_0000673
so part of: SD1D_RS01490
location: complement(316359..317354)
location: region:316359-317354:-1
so has part: feature:316359-317354:-1:exon

WP_058257281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316359-317354:-1:exon

SD1D_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01495
old locus tag: SD1D_0302
so part of: sequence
location: complement(317421..318500)
location: region:317421-318500:-1
so has part: feature:317421-318500:-1:exon
subclass of: SO_0000010

position:317421:-1
position: 317421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318500:-1
position: 318500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317421-318500:-1:exon

SD1D_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01495
old locus tag: SD1D_0302
inference: COORDINATES: protein motif:HMM:NF024091.2
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MRIKLMYYEIYKVLFSYKIIWLIMAFLLIKTAVVCILPELRDPRIKISKNQYDKVLEEVAGETSPKKEQYIFETNEHYLSTLNKYQDNLNLYLAGKIDEDVWKDYTNEYNEAKLYGNAFSMLNEKAEAFVSFRTSYDSDLPLQAYFYEYGWHSVFIYMSFPDPILCIFALIIGIQFICPEISSGSMQVILTSKKGRRSLFITKLISLFILLGSTAIINIIIELVVFYSRFYLKEGHWPLYSITLFISNPIKLNLYQALALLMVIRHMGFIFTGLFAFCIAGLTENASHGMFISILLILLPWLLIPDIPFTISAWLSGTPVLKVSYRITPLIVLIVTLIITTWIFYYKKFLLRKIIIHKN
SIO_010081: SD1D_RS01495
subclass of: SO_0000673
so part of: SD1D_RS01495
location: complement(317421..318500)
location: region:317421-318500:-1
so has part: feature:317421-318500:-1:exon

WP_058257282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317421-318500:-1:exon

SD1D_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01500
old locus tag: SD1D_0303
so part of: sequence
location: complement(318497..319729)
location: region:318497-319729:-1
so has part: feature:318497-319729:-1:exon
subclass of: SO_0000010

position:318497:-1
position: 318497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319729:-1
position: 319729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318497-319729:-1:exon

SD1D_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01500
old locus tag: SD1D_0303
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLIQYEIRKALSSRFLIVFLLLLIALNTFLFMEPWSSDDMFIAGKLYRDTRPLYDFLYSANSDAYNEYIDWLTDVYGDEWQYSFVELNNDGIPGRFLPAAYQEVSALSNCYTFINILFPEILANREHIVDTARRLGGVAYMEDDYYGMRMNLDIIKHYSVKPAILPAFATDENEGVFWVGNQNGWKHFFNYKWGNLFAILFSLLISSRIFPLENKASSLLYATPKGRCHTAVAKLTAAVLISAIISLLFSLLNIILTAWQYGLGGINASILSILQFSLSHLNLTIGQTILLFTLFQTFGVMCIAVVATALSYILKSNLASYLGSVVFLGLSYGYYLLMGKNYDIPVVFRTLPDVTLWARPMWMFETYRAVNLFSYPLMLEWVCFFFWLLIIIALYVLTIMRSKKGVRLS
SIO_010081: SD1D_RS01500
subclass of: SO_0000673
so part of: SD1D_RS01500
location: complement(318497..319729)
location: region:318497-319729:-1
so has part: feature:318497-319729:-1:exon

WP_058257283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318497-319729:-1:exon

SD1D_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01505
old locus tag: SD1D_0304
so part of: sequence
location: complement(319710..320612)
location: region:319710-320612:-1
so has part: feature:319710-320612:-1:exon
subclass of: SO_0000010

position:319710:-1
position: 319710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320612:-1
position: 320612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319710-320612:-1:exon

SD1D_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01505
old locus tag: SD1D_0304
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MLLELQGLTKHYHDKVALEDVSLSLDPGIWGLLGPNGAGKSTMMNIIADILPRTRGEVLWNKESVRKLGNKYRSILGFLPQSVGLYEHFKARDYLRYMCILKDILQEKNKKKELKEHIDSIIDTVNLSSDANRRIRTFSGGMRQRLGIAQALLGDPKLLILDEPTAGLDPQERIRLRNTIAASSANRIVLWSTHIVSDIENIASKIIMLRKGKCIAVGTPSELVSELNGQVWTLDIFPEQLKDYQNRFTICNIALEGNTRHIRLIAASKPHPEALQADPTLEDLYLFYYGEEGYHETDSV
SIO_010081: SD1D_RS01505
subclass of: SO_0000673
so part of: SD1D_RS01505
location: complement(319710..320612)
location: region:319710-320612:-1
so has part: feature:319710-320612:-1:exon

WP_058257284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319710-320612:-1:exon

SD1D_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01510
old locus tag: SD1D_0305
so part of: sequence
location: complement(320627..321763)
location: region:320627-321763:-1
so has part: feature:320627-321763:-1:exon
subclass of: SO_0000010

position:320627:-1
position: 320627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321763:-1
position: 321763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320627-321763:-1:exon

SD1D_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01510
old locus tag: SD1D_0305
inference: COORDINATES: protein motif:HMM:NF027787.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5050 domain-containing protein
translation: MKRSIIINLFFAFLVLSLTACSNKSNWKNEFNLEIDNIEDIPSEENPTLNNQEVSNKYKPTWIDIAPEDMPYQYANMFKSVSGASVLDMPKKLLFTAVYPGKIVLMEYIKDSGRIESFCKLATCSHTNEECVAGRVGELDYRNQILCAGRTRDKDNMWISQLNNGRFEFVTGPVNSFVQGDDGYYCTTEDASFVRFKFGSDKPQLLVEKFQYIKPVILGNYLYAANEVEVVRVDLRGSVYNVETVISDVISCYSTDGNHLYYLKMESEKPALYRCDLEGNNQELVLNKLIFPTYLSYDDTYIYYSTTNSNNSEDPTNGDIYRFSKDLSGEPELLCKTYANYPVVYVLPTSPDTLLVYMNYSYYFLPKTGGKLIELVLP
SIO_010081: SD1D_RS01510
subclass of: SO_0000673
so part of: SD1D_RS01510
location: complement(320627..321763)
location: region:320627-321763:-1
so has part: feature:320627-321763:-1:exon

WP_058257285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320627-321763:-1:exon

SD1D_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01515
old locus tag: SD1D_0306
so part of: sequence
location: complement(321893..322273)
location: region:321893-322273:-1
so has part: feature:321893-322273:-1:exon
subclass of: SO_0000010

position:321893:-1
position: 321893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322273:-1
position: 322273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321893-322273:-1:exon

SD1D_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01515
old locus tag: SD1D_0306
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYRKTVLFVAIFSLLHLLSTSVFAVENDLTDGGEYGKLRIYYDLSISGSTAYASTIAYQYEPNPNLSTYVEARYYDVGSNTYRLKTASGSTSATSYTPNTVVEAKSVHTANSKEWGYFRATLIRP
SIO_010081: SD1D_RS01515
subclass of: SO_0000673
so part of: SD1D_RS01515
location: complement(321893..322273)
location: region:321893-322273:-1
so has part: feature:321893-322273:-1:exon

WP_058257286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321893-322273:-1:exon

SD1D_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01520
old locus tag: SD1D_0307
so part of: sequence
location: complement(322436..323572)
location: region:322436-323572:-1
so has part: feature:322436-323572:-1:exon
subclass of: SO_0000010

position:322436:-1
position: 322436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323572:-1
position: 323572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322436-323572:-1:exon

SD1D_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01520
old locus tag: SD1D_0307
inference: COORDINATES: protein motif:HMM:NF027787.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5050 domain-containing protein
translation: MKKNTILYLFSTIFIFFLTACSDKSNWKDDFRLEADDKENISSEDNLLLNNSETSDVYKPTWIDIAPEDMPYQYANMFKSVSGAFVIDLTEKILFEATYQGKPTLMEYKKDFGHIETFCKLATCSHNTDECVAGNVYQLDYRNQILCAGRTQKDADIWISQLKNGRFEFVAGPVNSFVQGDDGYYCTTKDASLVRFKFGSDKPQLLVEKFQYIKPVILGNYLYAANEVEVVRVDLRGPVYNVETVISDVISCYSTDGNHLYYLKMESEKPALYRCDLKGNNQELVLNKLIFPTYLSYDDTYIYYSTTNRNNPDDPTNGNIYRFSKDLSGEPELLCETNANYPVVYVLPTSPDTLLVEANNFYYFLPKTGGELIELVLP
SIO_010081: SD1D_RS01520
subclass of: SO_0000673
so part of: SD1D_RS01520
location: complement(322436..323572)
location: region:322436-323572:-1
so has part: feature:322436-323572:-1:exon

WP_058257287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322436-323572:-1:exon

SD1D_RS12090
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12090
so part of: sequence
location: complement(324571..324750)
location: region:324571-324750:-1
so has part: feature:324571-324750:-1:exon
subclass of: SO_0000010

position:324571:-1
position: 324571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324750:-1
position: 324750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324571-324750:-1:exon

SD1D_RS12090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLTQLLSASVFAAIEGETIGGKTGNLKIFYDLSIAKTSAYASTTAKLYDPNPNLSTYV
SIO_010081: SD1D_RS12090
subclass of: SO_0000673
so part of: SD1D_RS12090
location: complement(324571..324750)
location: region:324571-324750:-1
so has part: feature:324571-324750:-1:exon

WP_157893080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324571-324750:-1:exon

SD1D_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01525
old locus tag: SD1D_0308
so part of: sequence
location: 325007..325399
location: region:325007-325399:1
so has part: feature:325007-325399:1:exon
subclass of: SO_0000010

position:325007:1
position: 325007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325399:1
position: 325399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325007-325399:1:exon

SD1D_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01525
old locus tag: SD1D_0308
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transposase
translation: MAKYSFEFKKEVVVAYLSSKGSTYSLAKDYGIPDNKQVSKWVNSYQKMGDEGLRRSRRYKNYSVEYKISVVELYLSNELSYQELSLQQGINNPALIAKWVNDFRIAGPEALRVRKKGRKKTLDKSCDSAI
SIO_010081: SD1D_RS01525
subclass of: SO_0000673
so part of: SD1D_RS01525
location: 325007..325399
location: region:325007-325399:1
so has part: feature:325007-325399:1:exon

WP_242955238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325007-325399:1:exon

SD1D_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01530
old locus tag: SD1D_0310
so part of: sequence
location: 325616..325894
location: region:325616-325894:1
so has part: feature:325616-325894:1:exon
subclass of: SO_0000010

position:325616:1
position: 325616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325894:1
position: 325894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325616-325894:1:exon

SD1D_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01530
old locus tag: SD1D_0310
inference: COORDINATES: protein motif:HMM:NF024673.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MYWQKRFNRENPDKKLEEKIREIQELNKDYGYRRMFGELRNQGYIINKKKVQRIMQKLGLQSRKYSSYKGKVGTVAPNRIHSASIRIYHTRK
SIO_010081: SD1D_RS01530
subclass of: SO_0000673
so part of: SD1D_RS01530
location: 325616..325894
location: region:325616-325894:1
so has part: feature:325616-325894:1:exon

WP_157893081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325616-325894:1:exon

SD1D_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01535
old locus tag: SD1D_0311
so part of: sequence
location: complement(326122..327090)
location: region:326122-327090:-1
so has part: feature:326122-327090:-1:exon
subclass of: SO_0000010

position:326122:-1
position: 326122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327090:-1
position: 327090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326122-327090:-1:exon

SD1D_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01535
old locus tag: SD1D_0311
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019850688.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPFH domain-containing protein
translation: MGFFSRQFANVVEWKEFRDDMIFYKWSNNEIKKGSRLIIRPGQDAIFMFNGKIEGIFKDEGDYDIESQIIPFLSTLKGFKFGFNSGMRAEVLFVNTKEFITKWGTQNAINIPAPSLPGGMPIRANGTVSFKVSDYVKLIDKIAGVRDSYFVEDVRLRIRSVLDQLLMKWISKEGKDMFNLQANAFDIAAGIKTDLDMQLFDSGLAVTGFNIMSFTYPEEIQNMINKNASHSMVGDLSRYQQISMTDGIASGKVKGGGTAADMAGMMMGMNVANQMMQNINQQATNNQNSTNPAEGTKPNFCPNCGHKSSGANFCPNCGQKLV
SIO_010081: SD1D_RS01535
subclass of: SO_0000673
so part of: SD1D_RS01535
location: complement(326122..327090)
location: region:326122-327090:-1
so has part: feature:326122-327090:-1:exon

WP_058257288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326122-327090:-1:exon

SD1D_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01540
old locus tag: SD1D_0312
so part of: sequence
location: complement(327155..328483)
location: region:327155-328483:-1
so has part: feature:327155-328483:-1:exon
subclass of: SO_0000010

position:327155:-1
position: 327155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328483:-1
position: 328483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327155-328483:-1:exon

SD1D_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01540
old locus tag: SD1D_0312
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGNKSCKASNYLKLIILISIFVITTVVAVSCDKKGRPTGKEEPDVTKEPESDDLVPSGNLDPSEDAFESLDPNQPIFGSLVLVRDNQLFYKKGSSKNYSIVSKNLTTQEENEIVTVELPYSDVGNFCLKGDYIYYDRDDRLHKVSLDGSNDTKLYKRKADLLGFYGDDVIVFDKSSYSLIRINNDGEYKTLLKKGYFYMEATVMAEGIYYILPSSEKKDEPSVQLYYMDFEGNNKTLLLEDREVFHLKSNNNEAFFIARDSHKFKIYKVKDKKLDIIYNINREDLEALGYRWDFLLPTGVYLLGVTSTHVYYGVEFDADGKEALHVYSVKTDGSGHELFYIPSDMEELNPAAYFSRGSIDNGYLKILFDCDTNPPETLYINLQDKSFMLFDGAYHLAMDVEGDYVYYLKSSEYDSGELTPEIEYKYQESKISDLLNERISK
SIO_010081: SD1D_RS01540
subclass of: SO_0000673
so part of: SD1D_RS01540
location: complement(327155..328483)
location: region:327155-328483:-1
so has part: feature:327155-328483:-1:exon

WP_058257289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327155-328483:-1:exon

SD1D_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01545
old locus tag: SD1D_0313
so part of: sequence
location: complement(328515..329417)
location: region:328515-329417:-1
so has part: feature:328515-329417:-1:exon
subclass of: SO_0000010

position:328515:-1
position: 328515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329417:-1
position: 329417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328515-329417:-1:exon

SD1D_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01545
old locus tag: SD1D_0313
inference: COORDINATES: protein motif:HMM:NF016424.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TPM domain-containing protein
translation: MIYRNRFLLCLILSLSLVHIIFGTRTAYATSKRIYDEAGLLTGEEIDELESTIKLYEEVSGIEIFILTHNDKKSTYPEKYIEDFEDRLPEADRVYFLYDVYRGEIFMEGYGLAETYIHSKRIDKILDRMVDDLRNGNYFTAFETYIVKSAAYMDDDSELNYDHNYIYDNPPQGFDPNNEYSYDDYDYDRYYGEESNDNILLNIWFQLFASFGIGGIVVGIMAYNSGGKMTAGARDYLDRSRQSLIGKKDHYVRTTVSKSRIPSQSSGSGGSSSRGGYNSGGFRGGRSSGGRSHSSGGRKL
SIO_010081: SD1D_RS01545
subclass of: SO_0000673
so part of: SD1D_RS01545
location: complement(328515..329417)
location: region:328515-329417:-1
so has part: feature:328515-329417:-1:exon

WP_058257290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328515-329417:-1:exon

SD1D_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01550
old locus tag: SD1D_0314
so part of: sequence
location: complement(329414..330556)
location: region:329414-330556:-1
so has part: feature:329414-330556:-1:exon
subclass of: SO_0000010

position:329414:-1
position: 329414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330556:-1
position: 330556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329414-330556:-1:exon

SD1D_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01550
old locus tag: SD1D_0314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014794358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVTHFKCPNCGADMEFDTASGMLKCDSCGREENIENMPVNKQHPKGVKVTYDMDYEDKKAYETGFDNDYADPLYDDDQTHHSTFSENEVNEYHCKNCGAVLMTEAQTTATKCSFCGAGIVISDRLSGIYAPEYVIPFTISKDQAIAAFKKWCKKGLLNPKDFKVADRIKDITGLYVPFWLYDLNGKGEAEAICTKVRTYTRGEWKYTETKYYNVYRKVDLNYLKVPCDASKKMDDTLMDRIEPYSYNDLKNFKMPYLAGYIAEKYDFDDDELLPRVKNRIHSYVETYLRSTISGYSTVYFTRKDIHIRKQKSDYALLPVWMVCYDYRQAEHNFIMNGQTGKIVGRPPISTAKVIAWFLGVSGGSFLIFRLLTLLLGGGLL
SIO_010081: SD1D_RS01550
subclass of: SO_0000673
so part of: SD1D_RS01550
location: complement(329414..330556)
location: region:329414-330556:-1
so has part: feature:329414-330556:-1:exon

WP_058257291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329414-330556:-1:exon

SD1D_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01555
old locus tag: SD1D_0315
so part of: sequence
location: complement(330634..331308)
location: region:330634-331308:-1
so has part: feature:330634-331308:-1:exon
subclass of: SO_0000010

position:330634:-1
position: 330634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331308:-1
position: 331308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330634-331308:-1:exon

SD1D_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01555
old locus tag: SD1D_0315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005812995.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PspA/IM30 family protein
translation: MGILTRFKDIMSSNINALLDKAENPEKMIDQCLRNLNSDLGKVKSETAAIMAEEQRAKRALDECNGEIERMQQFAIKALEANNEDDARKFLEQKASLTERQKGLQEAYDLASTNATHMRQMHDKLVADIGELEARKDMIKGKLAVAKTQERINKMGASVASANNSIASFQKYEDMADKALDKANAMAELNRSSAKQSIDDLAKKYTSDVSVDDELAALKASLNK
SIO_010081: SD1D_RS01555
subclass of: SO_0000673
so part of: SD1D_RS01555
location: complement(330634..331308)
location: region:330634-331308:-1
so has part: feature:330634-331308:-1:exon

WP_058257292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330634-331308:-1:exon

SD1D_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsJ
locus tag: SD1D_RS01560
old locus tag: SD1D_0316
so part of: sequence
location: 331932..332249
location: region:331932-332249:1
so has part: feature:331932-332249:1:exon
subclass of: SO_0000010

position:331932:1
position: 331932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332249:1
position: 332249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331932-332249:1:exon

SD1D_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsJ
locus tag: SD1D_RS01560
old locus tag: SD1D_0316
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004074848.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MASQIMRITLKAYDHQLIDQSAGKIIDTVKKTGSKVSGPVPLPTKKEVITILRAVHKYKDSREQFEQRTHKRLIDIITPTQKTVDALSRLEMPAGVYIDIKMKTK
SIO_010081: SD1D_RS01560
subclass of: SO_0000673
so part of: SD1D_RS01560
location: 331932..332249
location: region:331932-332249:1
so has part: feature:331932-332249:1:exon

WP_058257293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331932-332249:1:exon

SD1D_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplC
locus tag: SD1D_RS01565
old locus tag: SD1D_0317
so part of: sequence
location: 332397..333029
location: region:332397-333029:1
so has part: feature:332397-333029:1:exon
subclass of: SO_0000010

position:332397:1
position: 332397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333029:1
position: 333029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332397-333029:1:exon

SD1D_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplC
locus tag: SD1D_RS01565
old locus tag: SD1D_0317
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013274340.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MKKAILTTKVGMTQVFGENGVLIPVTVLQAGPVYVTQVKTVENDGYNAVQVAYGDIRDNLVNKPRKGHFAKAGVENKRFLKEFKFENAADYQVGQEIKADIFAAGDRVDATAKSKGKGFQGAIKRHGLGRGPMAHGSKYHRHAGSNSAATSPGRVFKGKKMPGHMGSVKVTVQNLEVVRVDAEKNLILVKGAVPGPKKSLVILKETVKAN
SIO_010081: SD1D_RS01565
subclass of: SO_0000673
so part of: SD1D_RS01565
location: 332397..333029
location: region:332397-333029:1
so has part: feature:332397-333029:1:exon

WP_058257294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332397-333029:1:exon

SD1D_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplD
locus tag: SD1D_RS01570
old locus tag: SD1D_0318
so part of: sequence
location: 333054..333674
location: region:333054-333674:1
so has part: feature:333054-333674:1:exon
subclass of: SO_0000010

position:333054:1
position: 333054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333674:1
position: 333674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333054-333674:1:exon

SD1D_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplD
locus tag: SD1D_RS01570
old locus tag: SD1D_0318
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003525121.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: MANVKVYNIEGKEVGTLELNDKVFGVEINEHLVHMAVVSQLANKRQGTQSAKTRAEVRGGGRKPWRQKGTGHARQGSIRAPQWKGGGVVFAPKPRDYSIKMNRKEKALAIKSALTSRVNADKFLVLDQFGFDEIKTKKMKEVLNNLKVNKALIVLDKKDANVELSARNLPNVRTVLSNSISVYDILKYDNLVITKDAVAQIEEVYA
SIO_010081: SD1D_RS01570
subclass of: SO_0000673
so part of: SD1D_RS01570
location: 333054..333674
location: region:333054-333674:1
so has part: feature:333054-333674:1:exon

WP_058257295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333054-333674:1:exon

SD1D_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplW
locus tag: SD1D_RS01575
old locus tag: SD1D_0319
so part of: sequence
location: 333674..333973
location: region:333674-333973:1
so has part: feature:333674-333973:1:exon
subclass of: SO_0000010

position:333973:1
position: 333973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333674-333973:1:exon

SD1D_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplW
locus tag: SD1D_RS01575
old locus tag: SD1D_0319
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015513758.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L23
translation: MADLKYYDVILKPIVTEKSMNSMSEKKYTFAVHPEATKNQIKEAVEKMFAGTKVAKVNTMNLEGKTRRRGYQVGKTAKTKKAIVQLTEDSADIEIFSGL
SIO_010081: SD1D_RS01575
subclass of: SO_0000673
so part of: SD1D_RS01575
location: 333674..333973
location: region:333674-333973:1
so has part: feature:333674-333973:1:exon

WP_058257296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333674-333973:1:exon

SD1D_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplB
locus tag: SD1D_RS01580
old locus tag: SD1D_0320
so part of: sequence
location: 334055..334897
location: region:334055-334897:1
so has part: feature:334055-334897:1:exon
subclass of: SO_0000010

position:334055:1
position: 334055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334897:1
position: 334897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334055-334897:1:exon

SD1D_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplB
locus tag: SD1D_RS01580
old locus tag: SD1D_0320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009461329.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MGIKTFTPYTPSRRHMTGSDFSEITATKPEKSLVVSLNKKAGRNNQGKITVRHRGGGARRKYRIIDFKRRKDGIPAKVATIEYDPNRTANIALLHYADGEKAYILAPYGLKVGTTLMSGENAEIKVGNCLPLANIPVGTEVHNIELHPGKGGQLVRSAGNSAQLMAKEGKYATLRLPSGEMRMVLANCRATIGQVGNIDHELITVGKAGRKRHMGRRPVVRGSAMNPNDHPHGGGEGRTGIGRPGPSTPWGKPALGLKTRKTNKKSNKLIVRRRDGRTYK
SIO_010081: SD1D_RS01580
subclass of: SO_0000673
so part of: SD1D_RS01580
location: 334055..334897
location: region:334055-334897:1
so has part: feature:334055-334897:1:exon

WP_058257297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334055-334897:1:exon

SD1D_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsS
locus tag: SD1D_RS01585
old locus tag: SD1D_0321
so part of: sequence
location: 334948..335229
location: region:334948-335229:1
so has part: feature:334948-335229:1:exon
subclass of: SO_0000010

position:334948:1
position: 334948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335229:1
position: 335229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334948-335229:1:exon

SD1D_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsS
locus tag: SD1D_RS01585
old locus tag: SD1D_0321
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007885930.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MARSLKKGPFADDHLLKKVEELNKSGDKTVIKTWSRRSTIFPQMVGHTIAVHDGRRHVPVYITEDMVGHKLGEFVATRTYRGHGKDEKKAGRK
SIO_010081: SD1D_RS01585
subclass of: SO_0000673
so part of: SD1D_RS01585
location: 334948..335229
location: region:334948-335229:1
so has part: feature:334948-335229:1:exon

WP_058257298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334948-335229:1:exon

SD1D_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplV
locus tag: SD1D_RS01590
old locus tag: SD1D_0322
so part of: sequence
location: 335261..335644
location: region:335261-335644:1
so has part: feature:335261-335644:1:exon
subclass of: SO_0000010

position:335261:1
position: 335261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335644:1
position: 335644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335261-335644:1:exon

SD1D_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplV
locus tag: SD1D_RS01590
old locus tag: SD1D_0322
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009267279.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: MAKGHRSQIKRERNEVKDNRAKAKLSYARVSVQKACFVLDAIRGKDVKTALGILAYSPRYASTLIEKLLKSAIANAEVKNMDPDKLYIEECYANQGPIMKRIQPRARGTAYRIEKRMCHITIVLNER
SIO_010081: SD1D_RS01590
subclass of: SO_0000673
so part of: SD1D_RS01590
location: 335261..335644
location: region:335261-335644:1
so has part: feature:335261-335644:1:exon

WP_058257299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335261-335644:1:exon

SD1D_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsC
locus tag: SD1D_RS01595
old locus tag: SD1D_0323
so part of: sequence
location: 335656..336315
location: region:335656-336315:1
so has part: feature:335656-336315:1:exon
subclass of: SO_0000010

position:335656:1
position: 335656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336315:1
position: 336315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335656-336315:1:exon

SD1D_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsC
locus tag: SD1D_RS01595
old locus tag: SD1D_0323
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018597899.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGQKVNPHGLRVGIINDWDSRWYAEADFADNLVEDYKIRTYLKKKLYNAGVSKIEIERASDRLKLIIYTAMPGKVIGRGGSEIDKLKVEIQKFTDKRLNIEIKEVKRPDLNAQLVAENIASQLENRISFRRAMKSTMARTMKAGAKGIKASVGGRLGGADIARTEFYSEGTIPLQTLRADIDYGFAEADTTFGKLGVKVWIYHGEVLPKKGAKKEGSDK
SIO_010081: SD1D_RS01595
subclass of: SO_0000673
so part of: SD1D_RS01595
location: 335656..336315
location: region:335656-336315:1
so has part: feature:335656-336315:1:exon

WP_058257300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335656-336315:1:exon

SD1D_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplP
locus tag: SD1D_RS01600
old locus tag: SD1D_0324
so part of: sequence
location: 336315..336752
location: region:336315-336752:1
so has part: feature:336315-336752:1:exon
subclass of: SO_0000010

position:336752:1
position: 336752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336315-336752:1:exon

SD1D_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplP
locus tag: SD1D_RS01600
old locus tag: SD1D_0324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002566507.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MLMPKRVKHRKQFRGRMTGKATRGNTLAHGDYGIVALEPAWIRSNQIEAARVAMTRFTKRGGKVWIKIFPDKPVTSKPAETRMGSGKGSLEYWVAVVKPGRVMFEIAGIPEETAREALRLAMHKLPVKCKIVSRADLEGGEDNEN
SIO_010081: SD1D_RS01600
subclass of: SO_0000673
so part of: SD1D_RS01600
location: 336315..336752
location: region:336315-336752:1
so has part: feature:336315-336752:1:exon

WP_058257301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336315-336752:1:exon

SD1D_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpmC
locus tag: SD1D_RS01605
old locus tag: SD1D_0325
so part of: sequence
location: 336742..336951
location: region:336742-336951:1
so has part: feature:336742-336951:1:exon
subclass of: SO_0000010

position:336742:1
position: 336742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336951:1
position: 336951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336742-336951:1:exon

SD1D_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpmC
locus tag: SD1D_RS01605
old locus tag: SD1D_0325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004607291.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L29
translation: MKTKKYVEDLRTKSIADLNEELVAAKKELFNLRFQNATNQLDNTSRIKEVRKNIARIQTVISEMKKASK
SIO_010081: SD1D_RS01605
subclass of: SO_0000673
so part of: SD1D_RS01605
location: 336742..336951
location: region:336742-336951:1
so has part: feature:336742-336951:1:exon

WP_058257302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336742-336951:1:exon

SD1D_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsQ
locus tag: SD1D_RS01610
old locus tag: SD1D_0326
so part of: sequence
location: 337007..337261
location: region:337007-337261:1
so has part: feature:337007-337261:1:exon
subclass of: SO_0000010

position:337007:1
position: 337007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337261:1
position: 337261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337007-337261:1:exon

SD1D_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsQ
locus tag: SD1D_RS01610
old locus tag: SD1D_0326
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005950435.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MERNLRKVRIGKVVSDKMDKTIVVAIVDNVKHPLYGKIVKRTYKLKAHDENNECKIGDRVKVMETRPLSKDKRWRLVEIIEKAK
SIO_010081: SD1D_RS01610
subclass of: SO_0000673
so part of: SD1D_RS01610
location: 337007..337261
location: region:337007-337261:1
so has part: feature:337007-337261:1:exon

WP_058257303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337007-337261:1:exon

SD1D_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplN
locus tag: SD1D_RS01615
old locus tag: SD1D_0327
so part of: sequence
location: 337305..337673
location: region:337305-337673:1
so has part: feature:337305-337673:1:exon
subclass of: SO_0000010

position:337305:1
position: 337305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337673:1
position: 337673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337305-337673:1:exon

SD1D_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplN
locus tag: SD1D_RS01615
old locus tag: SD1D_0327
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQVESRLKVADNTGAKELLCIRVLGGTGRRYANIGDIIVASVKDATPGGVVKKGDVVKAVVVRTVKGARRKDGSYIRFDENAAVIIKDDNNPRGTRIFGPVARELREKHFMKIVSLAPEVL
SIO_010081: SD1D_RS01615
subclass of: SO_0000673
so part of: SD1D_RS01615
location: 337305..337673
location: region:337305-337673:1
so has part: feature:337305-337673:1:exon

WP_058257304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337305-337673:1:exon

SD1D_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplX
locus tag: SD1D_RS01620
old locus tag: SD1D_0328
so part of: sequence
location: 337687..338004
location: region:337687-338004:1
so has part: feature:337687-338004:1:exon
subclass of: SO_0000010

position:337687:1
position: 337687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338004:1
position: 338004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337687-338004:1:exon

SD1D_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplX
locus tag: SD1D_RS01620
old locus tag: SD1D_0328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201651.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MATTKIKKGDNVKVIAGKDKGKEGKVLEVRNGKVIVEGVNMISKHTKPNQANPKGGIVRQEAPIDASNVMYVHKGKVTRVGFKFVEGKNGLKKVRIAKSTGEVID
SIO_010081: SD1D_RS01620
subclass of: SO_0000673
so part of: SD1D_RS01620
location: 337687..338004
location: region:337687-338004:1
so has part: feature:337687-338004:1:exon

WP_058257305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337687-338004:1:exon

SD1D_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplE
locus tag: SD1D_RS01625
old locus tag: SD1D_0329
so part of: sequence
location: 338027..338566
location: region:338027-338566:1
so has part: feature:338027-338566:1:exon
subclass of: SO_0000010

position:338027:1
position: 338027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338566:1
position: 338566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338027-338566:1:exon

SD1D_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplE
locus tag: SD1D_RS01625
old locus tag: SD1D_0329
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013274328.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MARLKDFYYNEIVPGMIKKFGYKNALEVPKLDKIVINMGVGEAKENAKVLESAVKDLEIIAGQKPVITKAKKSVANFKLREGMSIGCKVTLRGEKMYDFADRLINLALPRVRDFRGVNPNAFDGRGNYALGIKEQLIFPEIDYDKVDKVRGMDIIFVTTAKTDEEARELLTGFGMPFRK
SIO_010081: SD1D_RS01625
subclass of: SO_0000673
so part of: SD1D_RS01625
location: 338027..338566
location: region:338027-338566:1
so has part: feature:338027-338566:1:exon

WP_058257306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338027-338566:1:exon

SD1D_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01630
old locus tag: SD1D_0330
so part of: sequence
location: 338580..338765
location: region:338580-338765:1
so has part: feature:338580-338765:1:exon
subclass of: SO_0000010

position:338580:1
position: 338580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338765:1
position: 338765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338580-338765:1:exon

SD1D_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01630
old locus tag: SD1D_0330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012065428.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type Z 30S ribosomal protein S14
translation: MAKKSMIVKQQRKQKFSTREYNRCRICGRPHAYLRKYGICRICFRELAYKGQIPGVKKASW
SIO_010081: SD1D_RS01630
subclass of: SO_0000673
so part of: SD1D_RS01630
location: 338580..338765
location: region:338580-338765:1
so has part: feature:338580-338765:1:exon

WP_058257307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338580-338765:1:exon

SD1D_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsH
locus tag: SD1D_RS01635
old locus tag: SD1D_0331
so part of: sequence
location: 338790..339191
location: region:338790-339191:1
so has part: feature:338790-339191:1:exon
subclass of: SO_0000010

position:338790:1
position: 338790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339191:1
position: 339191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338790-339191:1:exon

SD1D_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsH
locus tag: SD1D_RS01635
old locus tag: SD1D_0331
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016281716.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MTMSDPIADMLTRIRNANTAKHDTVDVPASKMKIAIADILLREGYIKNYEIEEVGNFKTIHITLKYGKDKNTKIITGLKRISKPGLRVYASKDQLPKVLGGLGIAIISTNKGVLTDREAREQNVGGEVLAFVW
SIO_010081: SD1D_RS01635
subclass of: SO_0000673
so part of: SD1D_RS01635
location: 338790..339191
location: region:338790-339191:1
so has part: feature:338790-339191:1:exon

WP_058257308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338790-339191:1:exon

SD1D_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplF
locus tag: SD1D_RS01640
old locus tag: SD1D_0332
so part of: sequence
location: 339274..339813
location: region:339274-339813:1
so has part: feature:339274-339813:1:exon
subclass of: SO_0000010

position:339274:1
position: 339274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339813:1
position: 339813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339274-339813:1:exon

SD1D_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplF
locus tag: SD1D_RS01640
old locus tag: SD1D_0332
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008372550.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MSRIGRMPIAIPAGVTVDVAENNKVTVKGPKGTLERLLPSEMTIKVEGSEVIVNRPNDLKKMKAFHGLTRTLIANMIIGVTEGYQKTLEINGVGYRAAKSGKELTLTVGYSHPVVMIDPEGIESTVDQNKIIIKGIDKEKVGQYAAEIRAKRPPEPYKGKGIKYADEVIRRKVGKAGKK
SIO_010081: SD1D_RS01640
subclass of: SO_0000673
so part of: SD1D_RS01640
location: 339274..339813
location: region:339274-339813:1
so has part: feature:339274-339813:1:exon

WP_058257309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339274-339813:1:exon

SD1D_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplR
locus tag: SD1D_RS01645
old locus tag: SD1D_0333
so part of: sequence
location: 339831..340199
location: region:339831-340199:1
so has part: feature:339831-340199:1:exon
subclass of: SO_0000010

position:339831:1
position: 339831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340199:1
position: 340199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339831-340199:1:exon

SD1D_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplR
locus tag: SD1D_RS01645
old locus tag: SD1D_0333
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002604688.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MVKKESRTDIRRKKHRKIRNRFTGTPERPRLAVFRSNNHMYAQIIDDTAGHTLVAASTLEKDVKAELEKTNDVAAAAYLGNVIAKRAVEKGIKAVVFDRGGFIYQGKIKALADAAREAGLEF
SIO_010081: SD1D_RS01645
subclass of: SO_0000673
so part of: SD1D_RS01645
location: 339831..340199
location: region:339831-340199:1
so has part: feature:339831-340199:1:exon

WP_058257310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339831-340199:1:exon

SD1D_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsE
locus tag: SD1D_RS01650
old locus tag: SD1D_0334
so part of: sequence
location: 340216..340719
location: region:340216-340719:1
so has part: feature:340216-340719:1:exon
subclass of: SO_0000010

position:340216:1
position: 340216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340719:1
position: 340719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340216-340719:1:exon

SD1D_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsE
locus tag: SD1D_RS01650
old locus tag: SD1D_0334
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003497820.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MKRLTVDTSQLEDKVVSIKRVTKVVKGGRNMRFTALVVVGDKNGLVGAGLGKAAEIPEAIRKGKEAATKNLIRVPIDENGSIPHDYMGKFGGASVLLKRSPEGTGVIAGGPVRNVLELAGYKNIRTKSLGSNNKHNVVLATIDGLSRLKTPEEVAKLRGVPVEQLIN
SIO_010081: SD1D_RS01650
subclass of: SO_0000673
so part of: SD1D_RS01650
location: 340216..340719
location: region:340216-340719:1
so has part: feature:340216-340719:1:exon

WP_058257311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340216-340719:1:exon

SD1D_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpmD
locus tag: SD1D_RS01655
old locus tag: SD1D_0335
so part of: sequence
location: 340756..340938
location: region:340756-340938:1
so has part: feature:340756-340938:1:exon
subclass of: SO_0000010

position:340756:1
position: 340756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340938:1
position: 340938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340756-340938:1:exon

SD1D_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpmD
locus tag: SD1D_RS01655
old locus tag: SD1D_0335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018597911.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L30
translation: MADKLKITLVKSTIGAIPKHRATIKALGLRKLNKTVEMPDNPAVRGMINQVKHLVKVEEI
SIO_010081: SD1D_RS01655
subclass of: SO_0000673
so part of: SD1D_RS01655
location: 340756..340938
location: region:340756-340938:1
so has part: feature:340756-340938:1:exon

WP_058257312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340756-340938:1:exon

SD1D_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplO
locus tag: SD1D_RS01660
old locus tag: SD1D_0336
so part of: sequence
location: 340966..341403
location: region:340966-341403:1
so has part: feature:340966-341403:1:exon
subclass of: SO_0000010

position:340966:1
position: 340966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341403:1
position: 341403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340966-341403:1:exon

SD1D_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplO
locus tag: SD1D_RS01660
old locus tag: SD1D_0336
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004074878.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MNLSELKPAYGSKENRFRKGRGHGSGNGKTAGKGHKGQKARSGAPRIGFEGGQMPLYRRIPKRGFTNRNTKEIVAINVDVLNKFDDGATVTVDSLIEAGIIKNPKDGVKILGNGELTKKLDVKVNAYSASAAEKIQALGGNAEVI
SIO_010081: SD1D_RS01660
subclass of: SO_0000673
so part of: SD1D_RS01660
location: 340966..341403
location: region:340966-341403:1
so has part: feature:340966-341403:1:exon

WP_058257313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340966-341403:1:exon

SD1D_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: secY
locus tag: SD1D_RS01665
old locus tag: SD1D_0337
so part of: sequence
location: 341405..342742
location: region:341405-342742:1
so has part: feature:341405-342742:1:exon
subclass of: SO_0000010

position:341405:1
position: 341405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342742:1
position: 342742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341405-342742:1:exon

SD1D_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: secY
locus tag: SD1D_RS01665
old locus tag: SD1D_0337
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003497815.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecY
translation: MFKTFRNALKVKDIRAKLFYTFLALIIVRLGTLLPAPAISREAVEEVFSSINLGFFNNLTGGSFTKMSIFALSISPYISASIIVQLLTIAIPKLEELQKEGEDGRKKIEELTRYMAVGLAVLESLAMAIGFGGSSGVLENGLTFTNVVLVVASFTAGSTFLMWLGERITQNGIGNGISIILLINIVSTMPADFIRLFFQFVYQKPIGNAILAVVITLLVILFTIVFVLIIQNGERKIPVQYAKKVQGRKMVGGQTSHIPLKVNTAGVIPVIFAGSLMSFPGVIASFFGVYPARAYFWPKVLKVLDQGSWLNINFKNFDFGEFKYSIGLLIYIGLIIFFAYFYTSITFNPIEIANNMKKQGGFIPGIRPGKPTSDHLNKVLNHIIFIGAIGLIIVSIIPIFFSGVFGASVSFGGTSIIIIVGVIIETIKEVESQMLVRHYKGFLND
SIO_010081: SD1D_RS01665
subclass of: SO_0000673
so part of: SD1D_RS01665
location: 341405..342742
location: region:341405-342742:1
so has part: feature:341405-342742:1:exon

WP_058257314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341405-342742:1:exon

SD1D_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01670
old locus tag: SD1D_0338
so part of: sequence
location: 342893..343537
location: region:342893-343537:1
so has part: feature:342893-343537:1:exon
subclass of: SO_0000010

position:342893:1
position: 342893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343537:1
position: 343537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342893-343537:1:exon

SD1D_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01670
old locus tag: SD1D_0338
EC number: 2.7.4.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009461292.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO process: GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylate kinase
translation: MKIIMLGAPGAGKGTQAKKIAQEFGIPHISTGDIFRENIKNNTQLGIKAKEYIDQGLLVPDELVMDLIIDRFKANDCKDGYVLDGFPRTIYQAEALDKKLKNKNESIDHVINIEVSDELIVRRMSGRRACLNCGRTYHIKTLKPKVEDICDYCNTKLVLRDDDKPETVKKRLQVYHEQTQPLIDYYNQKGLLRSMDGTKDIEVLYKEIMDFLKD
SIO_010081: SD1D_RS01670
subclass of: SO_0000673
so part of: SD1D_RS01670
location: 342893..343537
location: region:342893-343537:1
so has part: feature:342893-343537:1:exon

WP_058257315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342893-343537:1:exon

SD1D_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: map
locus tag: SD1D_RS01675
old locus tag: SD1D_0339
so part of: sequence
location: 343568..344320
location: region:343568-344320:1
so has part: feature:343568-344320:1:exon
subclass of: SO_0000010

position:343568:1
position: 343568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344320:1
position: 344320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343568-344320:1:exon

SD1D_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: map
locus tag: SD1D_RS01675
old locus tag: SD1D_0339
EC number: 3.4.11.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003497813.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MPISIKSEKEIKLMEESGRILAKVHEELEKLIRPGITTLEIDKKCYEIIKSFGCIPSFLNYNGYPASLCISINDEVVHGIPDTKHILKEGDIVSLDCGVIYEGYHSDAARTVPVGEISEEAKKLIEVTKQSFFEGIKFAKAGNYLHEISEAIQTYVESFGFSVVRDLVGHGIGRNLHEEPQVPNFKQRNRGPKLAPGMTLAIEPMVNAGRCDVYWLDNDWTVVTEDGSLSAHYENTVLITDNEPKILTIL
SIO_010081: SD1D_RS01675
subclass of: SO_0000673
so part of: SD1D_RS01675
location: 343568..344320
location: region:343568-344320:1
so has part: feature:343568-344320:1:exon

WP_058257316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343568-344320:1:exon

SD1D_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01680
old locus tag: SD1D_0340
so part of: sequence
location: 344338..344619
location: region:344338-344619:1
so has part: feature:344338-344619:1:exon
subclass of: SO_0000010

position:344338:1
position: 344338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344619:1
position: 344619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344338-344619:1:exon

SD1D_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01680
old locus tag: SD1D_0340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738594.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KOW domain-containing RNA-binding protein
translation: MQDLVGTFVISKSGRDAGKCYVIINSHNEYVYLVDGKIRTLDYPKKKNLKHVNRLKYFDQNLAEAIKNKTVRNEEIKRAIKMLQVEISEKEDE
SIO_010081: SD1D_RS01680
subclass of: SO_0000673
so part of: SD1D_RS01680
location: 344338..344619
location: region:344338-344619:1
so has part: feature:344338-344619:1:exon

WP_058257317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344338-344619:1:exon

SD1D_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: infA
locus tag: SD1D_RS01685
old locus tag: SD1D_0341
so part of: sequence
location: 344619..344837
location: region:344619-344837:1
so has part: feature:344619-344837:1:exon
subclass of: SO_0000010

position:344837:1
position: 344837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344619-344837:1:exon

SD1D_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: infA
locus tag: SD1D_RS01685
old locus tag: SD1D_0341
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201639.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-1
translation: MSKSDVVEIEGTVVEKLPNAMFQVELENGHRVLAHISGKLRMNFIKIVPGDRVTLELSPYDLTKGRIIWRDK
SIO_010081: SD1D_RS01685
subclass of: SO_0000673
so part of: SD1D_RS01685
location: 344619..344837
location: region:344619-344837:1
so has part: feature:344619-344837:1:exon

WP_058257318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344619-344837:1:exon

SD1D_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpmJ
locus tag: SD1D_RS01690
so part of: sequence
location: 344981..345094
location: region:344981-345094:1
so has part: feature:344981-345094:1:exon
subclass of: SO_0000010

position:344981:1
position: 344981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345094:1
position: 345094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344981-345094:1:exon

SD1D_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpmJ
locus tag: SD1D_RS01690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVRSSVKPICEKCKIIRRKGSIRVICENPKHKQRQG
SIO_010081: SD1D_RS01690
subclass of: SO_0000673
so part of: SD1D_RS01690
location: 344981..345094
location: region:344981-345094:1
so has part: feature:344981-345094:1:exon

WP_020436478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344981-345094:1:exon

SD1D_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsM
locus tag: SD1D_RS01695
old locus tag: SD1D_0342
so part of: sequence
location: 345371..345739
location: region:345371-345739:1
so has part: feature:345371-345739:1:exon
subclass of: SO_0000010

position:345371:1
position: 345371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345739:1
position: 345739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345371-345739:1:exon

SD1D_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsM
locus tag: SD1D_RS01695
old locus tag: SD1D_0342
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016285758.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MARISGVDLPRDKRIEVGLTYIYGIGRVSARRILAEANVDPNTRVRDLTDDEAARIRDVIDETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQRTKTNARTRKGPKRTVANKKK
SIO_010081: SD1D_RS01695
subclass of: SO_0000673
so part of: SD1D_RS01695
location: 345371..345739
location: region:345371-345739:1
so has part: feature:345371-345739:1:exon

WP_058257319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345371-345739:1:exon

SD1D_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsK
locus tag: SD1D_RS01700
old locus tag: SD1D_0343
so part of: sequence
location: 345774..346175
location: region:345774-346175:1
so has part: feature:345774-346175:1:exon
subclass of: SO_0000010

position:345774:1
position: 345774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346175:1
position: 346175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345774-346175:1:exon

SD1D_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsK
locus tag: SD1D_RS01700
old locus tag: SD1D_0343
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201636.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MAKKIAAAKKGTKRRVKKNVERGQAHIQSSFNNTIVTLTDAEGNALSWASAGGLGFRGSRKSTPYAAQMAAETAAKAALVHGLKSVEVMVKGPGSGREAAIRAIQACGIEVTSIRDVTPVPHNGCRPPKRRRV
SIO_010081: SD1D_RS01700
subclass of: SO_0000673
so part of: SD1D_RS01700
location: 345774..346175
location: region:345774-346175:1
so has part: feature:345774-346175:1:exon

WP_058257320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345774-346175:1:exon

SD1D_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsD
locus tag: SD1D_RS01705
old locus tag: SD1D_0344
so part of: sequence
location: 346191..346787
location: region:346191-346787:1
so has part: feature:346191-346787:1:exon
subclass of: SO_0000010

position:346191:1
position: 346191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346787:1
position: 346787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346191-346787:1:exon

SD1D_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsD
locus tag: SD1D_RS01705
old locus tag: SD1D_0344
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007869283.1
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MARDMGPVLKRCRSLGIEPAYLGIDKKSNRSFSRAGKKTSEYGLQLREKQKAKFIYGMLEKPFRNLFDRAQKMKGGTAGENLLTLLELRLDNVIFRLGFARTRSEARQIVSHKHVLVNGKCVNIPSYTVKAGDTIEIREKGKRTQRYKDILEVTAGRTVPAWLEADQENLTGTVKEVPTRDQIDVPVDEMLIVELYSK
SIO_010081: SD1D_RS01705
subclass of: SO_0000673
so part of: SD1D_RS01705
location: 346191..346787
location: region:346191-346787:1
so has part: feature:346191-346787:1:exon

WP_058257321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346191-346787:1:exon

SD1D_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01710
old locus tag: SD1D_0345
so part of: sequence
location: 346842..347801
location: region:346842-347801:1
so has part: feature:346842-347801:1:exon
subclass of: SO_0000010

position:346842:1
position: 346842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347801:1
position: 347801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346842-347801:1:exon

SD1D_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01710
old locus tag: SD1D_0345
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009001884.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
translation: MFDFEKPNIEIAEISEDKKFGRFVVEPLERGYGTTLGNSLRRIMLSSLPGTAVSQIKIDGVVHEFSVVPGVKEDVTEIIMNIKELAIKNTSDTNEPKVAYIEAEGEVVVTAGDIQADPDIEILNPDQVIATLCGGPDSRLYMELTITNGRGYVSADKNKKDDLPIGVIPIDSIYTPVERVNLFVENTRVGQITDYDKLTLDVYTDGTLAPDEALSLAAKVLSVHLDSFIDLSEHAKNAEIMVEKEDNEKEKVLEMSIDELELSVRSYNCLKRAGINTVEELTNKTAEDMMKVRNLGRKSLEEVLSKLKELGLSLKQSED
SIO_010081: SD1D_RS01710
subclass of: SO_0000673
so part of: SD1D_RS01710
location: 346842..347801
location: region:346842-347801:1
so has part: feature:346842-347801:1:exon

WP_058257322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346842-347801:1:exon

SD1D_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01715
old locus tag: SD1D_0346
so part of: sequence
location: 347837..348373
location: region:347837-348373:1
so has part: feature:347837-348373:1:exon
subclass of: SO_0000010

position:347837:1
position: 347837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348373:1
position: 348373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347837-348373:1:exon

SD1D_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01715
old locus tag: SD1D_0346
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008726450.1
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bL17 family ribosomal protein
translation: MAGYRKLGRTSSQRKALLRNQVTNLLYHGKIVTTEAKAKEIRKIAEHMIALAVKEKDNYETVTVKAKVARKDKDGKRVKEVVDGKKVTVYDEVEKTIKKDSASRLHARKQMMKYLYSVTEVPQENAGRKRNTKSINLSDKLFEEIAPKYANRNGGYTRIVKIGPRKGDAAMEVLIELV
SIO_010081: SD1D_RS01715
subclass of: SO_0000673
so part of: SD1D_RS01715
location: 347837..348373
location: region:347837-348373:1
so has part: feature:347837-348373:1:exon

WP_058257323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347837-348373:1:exon

SD1D_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01720
old locus tag: SD1D_0347
so part of: sequence
location: 348560..349414
location: region:348560-349414:1
so has part: feature:348560-349414:1:exon
subclass of: SO_0000010

position:348560:1
position: 348560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349414:1
position: 349414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348560-349414:1:exon

SD1D_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01720
old locus tag: SD1D_0347
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006426391.1
GO component: GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter ATPase
translation: MEMIKVRDLAYEYIRRDEEGNVESINRAIDGVSLDVKRGDFIAILGANGSGKSTLAKHINAILYPSEGTVWVNGLSTAKEDNIWEIRRSAGMVFQNPDNQIISSVVEDDVGFGPENLGVPTKEIWQRVEDSLKAVGMLEYRKHSPNKLSGGQKQRVAIAGIMAMKPECIVLDEPTAMLDPDGRKEVIDTVLKLNREEKITILLITHHMDEVINADKVFVMEKGKVVMEGTPREIFSRVDEIKKYRLDVPQVTELGFELRKAGLDIPEGILSVDELVEALVRLKM
SIO_010081: SD1D_RS01720
subclass of: SO_0000673
so part of: SD1D_RS01720
location: 348560..349414
location: region:348560-349414:1
so has part: feature:348560-349414:1:exon

WP_058257324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348560-349414:1:exon

SD1D_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01725
old locus tag: SD1D_0348
so part of: sequence
location: 349454..350308
location: region:349454-350308:1
so has part: feature:349454-350308:1:exon
subclass of: SO_0000010

position:349454:1
position: 349454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350308:1
position: 350308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349454-350308:1:exon

SD1D_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01725
old locus tag: SD1D_0348
EC number: 3.6.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015560218.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter ATPase
translation: MQIVFENVNYVYGSGTSFEKHALKDINLKINKGEFIGLIGHTGSGKSTLIQHMNGLMKATSGKIYFNGDNIYHKNYNMRQLRNKVGLVFQYPEHQLFETTVFKDVYFGPKNLGLEKLEADLRTYEALKMVGIGEDLLDASPFELSGGQKRRVAIAGILAMKPDVLILDEPTAGLDPRGRDEILDQIAKLHKESKITVILVTHSMEDAAKYVDRLLVMNQGRLAMDEKPDKVFSRYKELEEIHLAAPQVTYVMNALKEKGFSLNPDVTTVSEAKDEILKALKGYA
SIO_010081: SD1D_RS01725
subclass of: SO_0000673
so part of: SD1D_RS01725
location: 349454..350308
location: region:349454-350308:1
so has part: feature:349454-350308:1:exon

WP_087758720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349454-350308:1:exon

SD1D_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01730
old locus tag: SD1D_0349
so part of: sequence
location: 350352..351173
location: region:350352-351173:1
so has part: feature:350352-351173:1:exon
subclass of: SO_0000010

position:350352:1
position: 350352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351173:1
position: 351173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350352-351173:1:exon

SD1D_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01730
old locus tag: SD1D_0349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003497764.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter transmembrane component T
translation: MIRDITIGQYYPADSILHRLDPRLKLSGTMLYIISIFLFDTFYGYIAVIIFLASIIKLSKVPLKFIIRGLKSIMFILLFTMAFNMFLTKGDIIFRLGFLKVTKQGLYSSIFMGSRLTLLLVGSSMMTYTTTPNQLTDGLERLLSPLTVFKVQVHEIAMMMSIALRFIPILVDETDKIMKAQMARGADFESGGLIKRAKSLIPLLVPLFVSAFRRALDLAMAMEARCYRGGQGRTKMKPLQYESKDYFAYGILALYLACVITISIIENRLPGLL
SIO_010081: SD1D_RS01730
subclass of: SO_0000673
so part of: SD1D_RS01730
location: 350352..351173
location: region:350352-351173:1
so has part: feature:350352-351173:1:exon

WP_058257326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350352-351173:1:exon

SD1D_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: truA
locus tag: SD1D_RS01735
old locus tag: SD1D_0350
so part of: sequence
location: 351232..351990
location: region:351232-351990:1
so has part: feature:351232-351990:1:exon
subclass of: SO_0000010

position:351232:1
position: 351232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351990:1
position: 351990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351232-351990:1:exon

SD1D_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: truA
locus tag: SD1D_RS01735
old locus tag: SD1D_0350
EC number: 5.4.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002594511.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(38-40) synthase TruA
translation: MRRIKLEVAYDGTNYHGWQVQPGKTTIEGVVNKALSELLQEDITVIGASRTDSGVHAKGNVAVFNTVSRIPPEKICYALNRYLPWDIRAQSSVEVPLWFHPRKVESKKTYEYKIINRNIAVPTERLYSHFVYYDMDIGAMEEAAGYLVGEHDFKSFCSVNTQVSSTVRRIYKLQVEKEGYLIKITVCGNGFLYNMVRIIVGTLIEVGRGRIAPKDMVKILKGLDRSLAGPTAPAHGLTLSCIEYDMNQIFKE
SIO_010081: SD1D_RS01735
subclass of: SO_0000673
so part of: SD1D_RS01735
location: 351232..351990
location: region:351232-351990:1
so has part: feature:351232-351990:1:exon

WP_058257327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351232-351990:1:exon

SD1D_RS12375
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12375
old locus tag: SD1D_0351
so part of: sequence
location: 352619..353224
location: region:352619-353224:1
so has part: feature:352619-353224:1:exon
subclass of: SO_0000010

position:352619:1
position: 352619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353224:1
position: 353224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352619-353224:1:exon

SD1D_RS12375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12375
old locus tag: SD1D_0351
inference: COORDINATES: protein motif:HMM:NF012870.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MKLNKRTVKPKSYPKSSYKKVTSTYPGERVQIDVKFVPVECIGFSSNQSRYYQITAIDEYSRKRYMELVNENSTFTTSNFLTRLEENLGFKVDLVQTDNGFEFVNDSERTSKKTRFQRVLKRLNIKHKRTRPYSPWQNGIVERSHRIDNERFYKKKRFISYREMEKSFYRYANRYNNIPKKILNFKTPNEIVSEFNFKDVS
SIO_010081: SD1D_RS12375
subclass of: SO_0000673
so part of: SD1D_RS12375
location: 352619..353224
location: region:352619-353224:1
so has part: feature:352619-353224:1:exon

WP_242955239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352619-353224:1:exon

SD1D_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rplM
locus tag: SD1D_RS01745
old locus tag: SD1D_0352
so part of: sequence
location: 353510..353944
location: region:353510-353944:1
so has part: feature:353510-353944:1:exon
subclass of: SO_0000010

position:353510:1
position: 353510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353944:1
position: 353944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353510-353944:1:exon

SD1D_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rplM
locus tag: SD1D_RS01745
old locus tag: SD1D_0352
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004850178.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MKSYMASPATVEKKWYVVDATGHTLGRLTSEIAKVLRGKNKPTYTPFIDTGDYVIVVNADKIKVTGKKLEQKTYFSHSGHVGGVRETTLAEMMAKKPTDVITLAVKGMLPKGPLGRSMIKKLHVYAGPEHPHAAQKPEALEIKY
SIO_010081: SD1D_RS01745
subclass of: SO_0000673
so part of: SD1D_RS01745
location: 353510..353944
location: region:353510-353944:1
so has part: feature:353510-353944:1:exon

WP_058257328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353510-353944:1:exon

SD1D_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rpsI
locus tag: SD1D_RS01750
old locus tag: SD1D_0353
so part of: sequence
location: 353973..354365
location: region:353973-354365:1
so has part: feature:353973-354365:1:exon
subclass of: SO_0000010

position:353973:1
position: 353973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354365:1
position: 354365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353973-354365:1:exon

SD1D_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rpsI
locus tag: SD1D_RS01750
old locus tag: SD1D_0353
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012743748.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MAKARYYGTGRRKSSIARVYLLPGTGKITINKRDMDDYFGLETLKLIVRQPLMLTDTQDKFDVMVNVRGGGFTGQAGAIRHGISRALLQADADYRPALKKAGFLTRDSRMKERKKYGLKAARRAPQFSKR
SIO_010081: SD1D_RS01750
subclass of: SO_0000673
so part of: SD1D_RS01750
location: 353973..354365
location: region:353973-354365:1
so has part: feature:353973-354365:1:exon

WP_058257329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353973-354365:1:exon

SD1D_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01755
old locus tag: SD1D_0354
so part of: sequence
location: 354593..355303
location: region:354593-355303:1
so has part: feature:354593-355303:1:exon
subclass of: SO_0000010

position:354593:1
position: 354593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355303:1
position: 355303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354593-355303:1:exon

SD1D_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01755
old locus tag: SD1D_0354
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSKFKILCILITVFSMKTSTLIYDQPTTNFKDLFDQVDGIDGAEAEALSYTLGNDFLKSPQDFIESASGLTDNKLGKVCSLLVSYFIYDDFEGFISIVDDLEDDSDLSEDCRTVLECINITINTLQNNKTVSLDDDTTFSGSTFEAAPFDKSTIMGFIENNLKSNRYEDELFNHTIATVYELDSEAFVKMISDLDNDEISSIAKSIALGYYKNNSSFTPKSEKEILVLIQENKRY
SIO_010081: SD1D_RS01755
subclass of: SO_0000673
so part of: SD1D_RS01755
location: 354593..355303
location: region:354593-355303:1
so has part: feature:354593-355303:1:exon

WP_058257330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354593-355303:1:exon

SD1D_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01760
old locus tag: SD1D_0355
so part of: sequence
location: 355602..356636
location: region:355602-356636:1
so has part: feature:355602-356636:1:exon
subclass of: SO_0000010

position:355602:1
position: 355602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356636:1
position: 356636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355602-356636:1:exon

SD1D_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01760
old locus tag: SD1D_0355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKNYVKVSKNSILQYREDYDVLVCSLRSSRIKAKQLAILELFLVLSQIGCLFIINGPLGDIKGIISFFINKKKRNLLHSLLKNVGYCDKFYILDFDNPDANSTPELVSVNKLMWKGIPFSVHKYYEQDRAIYKKHSSHNRDFFIYGNDGLIKKVKGYRGDGSDTGRRALPVEDSRLMVNLCVPYKAKTLMDPFAGSGGILHEARYIAPHLTLISVDIDPVLEPGLKKYADKHYAMDASDVILEDTVIDAIVTEVPFSPAATDSVIKVFEHLSKCLSYNGRIVFMCQVEQYEELKLCMKDLQLCPLIEKPVNRKGTDVVISAWYKRKEKVGKLQGFHEAVSKIY
SIO_010081: SD1D_RS01760
subclass of: SO_0000673
so part of: SD1D_RS01760
location: 355602..356636
location: region:355602-356636:1
so has part: feature:355602-356636:1:exon

WP_058257331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355602-356636:1:exon

SD1D_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01765
old locus tag: SD1D_0356
so part of: sequence
location: complement(356668..357417)
location: region:356668-357417:-1
so has part: feature:356668-357417:-1:exon
subclass of: SO_0000010

position:356668:-1
position: 356668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357417:-1
position: 357417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356668-357417:-1:exon

SD1D_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01765
old locus tag: SD1D_0356
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006782201.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MSAINIANRKTVLITGSSKGIGKAIALRFAKEGYNLVINGSKDKEKLEETKAEIEKFNVACLAFLGDMGDYHKVKELFKLIKEEFGHLDVLVNNAGISYIGLLSDMTWQDWDKVIRTNLTSIYNCCSLAIPNMVQKKAGKIINISSVWGNVGASCEVAYSASKGGMNAFTKALAKELAPSNIKVNAVACGAIDTEMNSFLSEEELYQLKEEIPMGRLGRSDEVADLVYYLAEKNEYLTGQVIGLDGGWI
SIO_010081: SD1D_RS01765
subclass of: SO_0000673
so part of: SD1D_RS01765
location: complement(356668..357417)
location: region:356668-357417:-1
so has part: feature:356668-357417:-1:exon

WP_058257332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356668-357417:-1:exon

SD1D_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01770
old locus tag: SD1D_0357
so part of: sequence
location: 357546..358385
location: region:357546-358385:1
so has part: feature:357546-358385:1:exon
subclass of: SO_0000010

position:357546:1
position: 357546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358385:1
position: 358385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357546-358385:1:exon

SD1D_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01770
old locus tag: SD1D_0357
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKSAGKLFATGFLKSFLFFVFFFAVSLLSYRLVVHFLDIEDGGYEEFIPPVEKQQPITEARLDDVSKHLIYCVDEDDGSIKKIVLEILDCKKVKLFYITIPIKTKLTLSDSLHSKLVLIKPSIPQFLKLSAITGYIPKEIAYEYGVLIIEELLNIQISYYSVVPSSLYETVFTGKNNINNSSEDGYPKEVFSDGFIEFLHSIDTETQLRSYIKDIYNMIYSNLSYEDKLNYMETYLKIQGKDIHFDLIAGTDSNSAYTIDYSKASMQLKSYMGDYIGE
SIO_010081: SD1D_RS01770
subclass of: SO_0000673
so part of: SD1D_RS01770
location: 357546..358385
location: region:357546-358385:1
so has part: feature:357546-358385:1:exon

WP_058257333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357546-358385:1:exon

SD1D_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01775
old locus tag: SD1D_0358
so part of: sequence
location: 358453..359337
location: region:358453-359337:1
so has part: feature:358453-359337:1:exon
subclass of: SO_0000010

position:358453:1
position: 358453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359337:1
position: 359337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358453-359337:1:exon

SD1D_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01775
old locus tag: SD1D_0358
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007871437.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YitT family protein
translation: MGFRKARNSKVDNLRNYMTIVVGSVIMAVAVNLIFEPLGLVTGGLAGLAIVVKELTKFIWEGGLPVWIFTVITNIPLFLVSIKLLGIKAMFSVSLGTITYVLALAVIPIYDFQFNDMLLAAVVGGAITGVGLGMVFSVSASTGGTDLLATLIQRFNRHMSVPTILTIVDGTIIILGALVFGIGNALYAIIAVFITAKVSDGLLEGLKFAKMAYIISDEYDKIAQEIMTSLDRGVTGLSSTGMYSNKERKMLFCVVSKKEIVKITEIAKKIDPNSFVIVNDVREVMGEGFIEYKQ
SIO_010081: SD1D_RS01775
subclass of: SO_0000673
so part of: SD1D_RS01775
location: 358453..359337
location: region:358453-359337:1
so has part: feature:358453-359337:1:exon

WP_058257334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358453-359337:1:exon

SD1D_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: ugpC
locus tag: SD1D_RS01780
old locus tag: SD1D_0359
so part of: sequence
location: 359520..360635
location: region:359520-360635:1
so has part: feature:359520-360635:1:exon
subclass of: SO_0000010

position:359520:1
position: 359520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360635:1
position: 360635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359520-360635:1:exon

SD1D_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: ugpC
locus tag: SD1D_RS01780
old locus tag: SD1D_0359
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013271512.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
translation: MASLSLKNITKQYPNGVVAVKDFNLEIADKEFIIFVGPSGCGKSTTLRMIAGLEEITQGELYIGDKLVNDVEPKDRDIAMVFQNYALYPHMSVYDNMAFGLKLRKVPKDQIDKVVHEAAKILDIEHLLDRKPKALSGGQRQRVAMGRAIVRNPKVFLMDEPLSNLDAKLRVQMRIEISKLHQKLQTTFIYVTHDQTEAMTLGTRIVVMKDGLIQQVDTPQNLYDKPQNLFVAGFMGSPQMNFIEATVLQRGSDVYVQFGSNTLRLPEAKAKKVVEGGYVDKNVIIGIRSEDIHDEEMFINNYPEAVIEATVRVYELLGAEVFLYFTVDEDIEITARVNPRTTARPDDVLKIAFDMSKLHVFDKDTEQVITN
SIO_010081: SD1D_RS01780
subclass of: SO_0000673
so part of: SD1D_RS01780
location: 359520..360635
location: region:359520-360635:1
so has part: feature:359520-360635:1:exon

WP_058257335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359520-360635:1:exon

SD1D_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01785
old locus tag: SD1D_0360
so part of: sequence
location: 360885..361973
location: region:360885-361973:1
so has part: feature:360885-361973:1:exon
subclass of: SO_0000010

position:360885:1
position: 360885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361973:1
position: 361973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360885-361973:1:exon

SD1D_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01785
old locus tag: SD1D_0360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002566963.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MISNQILQTTIDGLKNITRIDISVMDTEGKVLASTVENPEQYENIVLSFVASPADSQSIQGYQFFKVFEEHQLEYVIVAKGDSEDVFMVGKIAAFQIQNLLVAYKERYDKDNFIKNLLLDNLLLVDIYNRAKKLHIDSEARRVVYIIETKNEKDANALETVRSLFSGKTKDFITAVDEKNIILVKEVKPNETYEDLNKTAKIILDMLNTEAMTKVYVAYGTIVNEIKDVSRSYKEAKMALDVGKIFYSGKNVMAYNNLGIGRLIYQLPMPLCKMFIKEIFDGKSPDDFDEETLTTINKFFENNLNVSETSRQLYIHRNTLVYRLDKLHKNTNLDLRVFEDAITFKIALMVVKYMKYMEQLDY
SIO_010081: SD1D_RS01785
subclass of: SO_0000673
so part of: SD1D_RS01785
location: 360885..361973
location: region:360885-361973:1
so has part: feature:360885-361973:1:exon

WP_058257336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360885-361973:1:exon

SD1D_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01790
old locus tag: SD1D_0361
so part of: sequence
location: 361993..363243
location: region:361993-363243:1
so has part: feature:361993-363243:1:exon
subclass of: SO_0000010

position:361993:1
position: 361993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363243:1
position: 363243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361993-363243:1:exon

SD1D_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01790
old locus tag: SD1D_0361
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201601.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S41 family peptidase
translation: MLGGVYEEKLFDRVSYGTVRCLTCFYANGDCLFSFFYAPRLQTVPIGDTKVSEDEEEPYGHIVSKLSVLQMLIDTYYLDEVDNEALATGIYKGFVAGLNDPYSTYYTKEEFSNLQESSSGVYHGIGAVVSQDRKTGVITIVRPYKDGPAYKVGLLPDDIIYKVEGEEVTGKDLAEVVSKMKGKEGTKVNISIIRDGEAEPIDFTIVRQKINIPTIEYEMLEDDIGYIQIIEFDEITVSQFNEAIDKLEKMGMKGLVVDVRNNPGGLLESVVQMLDRLIFKGLIVYTEDKYHNREEERAEDPNKFDKPLAVLINGNSASASEIFAGAIQDYEIGTVVGTTSFGKGIVQKIIPLSDGTAVKLTISNYFTPKGRSLNGTGVEPDIEVELLDELKQLVTIPHDKDNQLQKAIEVIKEQIQ
SIO_010081: SD1D_RS01790
subclass of: SO_0000673
so part of: SD1D_RS01790
location: 361993..363243
location: region:361993-363243:1
so has part: feature:361993-363243:1:exon

WP_058257337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361993-363243:1:exon

SD1D_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01795
old locus tag: SD1D_0362
so part of: sequence
location: 363367..364536
location: region:363367-364536:1
so has part: feature:363367-364536:1:exon
subclass of: SO_0000010

position:363367:1
position: 363367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364536:1
position: 364536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363367-364536:1:exon

SD1D_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01795
old locus tag: SD1D_0362
inference: COORDINATES: protein motif:HMM:NF015557.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SLC13 family permease
translation: MPISKVIATVDWNVIFMIAGTMGIVGFFIESKMPSLLADQIINLVPNVKWAIIALALFAGIISAFIDNVATVLMIAPVAVTIAKKLKISPVNSVIAIAVSSNLQGAATLVGDTVSILLGGHAGLSFNDFFFLEGKPGLFWIVEAGALVATLVLVIVFRKEKDPIDKQELTKVEDYFPTVLLVGVVLLLIINSFIPGKYKPDAIEGLINGIICMTLFLIGLIRKFIKTKDTETFIEALKSIDYDTILLLAGLFIVIGGITEAGLVKEISKIFVKVSGDNVFLIYSLVVWASVLFSAFIDNIPYVATMLPVVGEISSIIGVEANLLYFGLLIGATLGGNITPIGASANITGLGILRKEGYDVSAPTFMKISVPFTLSAVVAGYLLVWLIWS
SIO_010081: SD1D_RS01795
subclass of: SO_0000673
so part of: SD1D_RS01795
location: 363367..364536
location: region:363367-364536:1
so has part: feature:363367-364536:1:exon

WP_058257338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363367-364536:1:exon

SD1D_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: flgM
locus tag: SD1D_RS01800
old locus tag: SD1D_0363
so part of: sequence
location: 364724..365002
location: region:364724-365002:1
so has part: feature:364724-365002:1:exon
subclass of: SO_0000010

position:364724:1
position: 364724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365002:1
position: 365002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364724-365002:1:exon

SD1D_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: flgM
locus tag: SD1D_RS01800
old locus tag: SD1D_0363
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005601316.1
GO process: GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis anti-sigma factor FlgM
translation: MRIEAYNKVNQIYNTSKVRNVKKTEKSSFQDKLEISQTANDYSIAKQAVDQTPDVREDKINEIKKRMESGTYNVSMEDVAEKIVSRYFDELI
SIO_010081: SD1D_RS01800
subclass of: SO_0000673
so part of: SD1D_RS01800
location: 364724..365002
location: region:364724-365002:1
so has part: feature:364724-365002:1:exon

WP_058257339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364724-365002:1:exon

SD1D_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01805
old locus tag: SD1D_0364
so part of: sequence
location: 365024..365536
location: region:365024-365536:1
so has part: feature:365024-365536:1:exon
subclass of: SO_0000010

position:365024:1
position: 365024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365536:1
position: 365536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365024-365536:1:exon

SD1D_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01805
old locus tag: SD1D_0364
inference: COORDINATES: protein motif:HMM:NF016985.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein FlgN
translation: MASLIEELISVLDKEHEIYKELIPIAREKTQIIVKNDTTALQEITAKEQKAIDKITALENSRGKLMEDIKTVLGKRNENLNLATLIGLLDRQPEEKQKLSLLHDKLKETVGVLVDINNRNKTLIQQSLEMIEFNMNFLQSARMAPGDNTYTKSASQKSENLGSGIFDAKQ
SIO_010081: SD1D_RS01805
subclass of: SO_0000673
so part of: SD1D_RS01805
location: 365024..365536
location: region:365024-365536:1
so has part: feature:365024-365536:1:exon

WP_058257340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365024-365536:1:exon

SD1D_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: flgK
locus tag: SD1D_RS01810
old locus tag: SD1D_0365
so part of: sequence
location: 365562..367292
location: region:365562-367292:1
so has part: feature:365562-367292:1:exon
subclass of: SO_0000010

position:365562:1
position: 365562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367292:1
position: 367292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365562-367292:1:exon

SD1D_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: flgK
locus tag: SD1D_RS01810
old locus tag: SD1D_0365
inference: COORDINATES: protein motif:HMM:TIGR02492.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgK
translation: MASFGSLYVGVSGLNVSQAALNVTSHNLANIDTKGYVRQQPVITDFQYVKKGDSHLSSMQLGLGANFAEIKQVRDMFLDQAYRQEIGRQAFYESQYQAISEIEGLFGELEGVQFQNTMNEFWEAMQELSREPDNIVARASFVQTAVSFIERADNIYGQLSDYQINLNTQIIDQVNRINEIGNEIKELNIKIRHYESAGVEKANDLRDQRNLLLDELSKIANITYNEDKDGVVTVNLEGMSFVSEDLVYRMETVKISEDSDMLKPVWVAHGYVDVFNMDRPPSSMHDTDIGSLKGLLLARGHKKANYTDIPVRERYETESMYQEAVREYNNKISPSVVMTVQAQFDQLIHGIVTMINDTLSPNKEVTLADGSKMKILDVEKAPVGMDSDREMGEALFTRKSMARYSDWEEIQIVNEDGEIETISARIYIEEDPKDNYSLYTIGEIEVNPRVLQNKSLLPLMKNDKTGAFDIEVAQELLDKWQKPFATLSPNTLTSNNVNDYYISFISELANRGDQINTISLNQESMVASIDNKRAEVIGVSSDDELTNLIKYQHSYNAAARYINVVSEMLEHIIMNL
SIO_010081: SD1D_RS01810
subclass of: SO_0000673
so part of: SD1D_RS01810
location: 365562..367292
location: region:365562-367292:1
so has part: feature:365562-367292:1:exon

WP_058257341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365562-367292:1:exon

SD1D_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: flgK
locus tag: SD1D_RS01815
old locus tag: SD1D_0366
so part of: sequence
location: 367304..369160
location: region:367304-369160:1
so has part: feature:367304-369160:1:exon
subclass of: SO_0000010

position:367304:1
position: 367304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369160:1
position: 369160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367304-369160:1:exon

SD1D_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: flgK
locus tag: SD1D_RS01815
old locus tag: SD1D_0366
inference: COORDINATES: protein motif:HMM:TIGR02492.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgK
translation: MASTFFGLNIGKTGLYAYKAALNTTAHNISNSETEGYTRQVMGLKAGKALRMNSTYGMAGTGVEVTGVIQLRDEYYDLKYRKNNTILGEYASKSHYMTEIENYFNEVSVEGFTTAFDSMYNSLQELSNNGSNLSVRSQVVNYGKSLTEFFNSLSKNLKNIQEECNFEIRNMVDKINSTAQQIAALTKQINTLEVSGGTANDLRDQRALLVDELSQVAGVTVSESVVGAGIGVTTYLVKIDGQTLVDGANYNKLQVVPRQYKNNQNDIDGLYDIVWESGQSFNLSSQSLGGALKALYEIRDGNNRHNLQGSIYGIAGDSYLTLTDTNINEVEKLNIPETGVITVENKKYAYTGFEVNIDEESGKYTYTFELEEPLWLPVESSDASVGESINYKGIPYYLDQLNEFIRTFAKAYNDIHRTGKDLDNNSAADFFTATNKVNGREYVFGPLADSDDQYYYEYNRFSSQTGGFYEEVPQNRPLYGSYYFMTAENFTINSDLINNPNRIATATDVVNGIDNNDVVEALIALKRDKTMFGQGDPGGFMNTLVADIGIDTRKANNFATNQEDILNAITNQKLSISGVDIDEEAMNLVRFQNAYNLSAKVISVMNEIYDRLINYMGV
SIO_010081: SD1D_RS01815
subclass of: SO_0000673
so part of: SD1D_RS01815
location: 367304..369160
location: region:367304-369160:1
so has part: feature:367304-369160:1:exon

WP_058257342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367304-369160:1:exon

SD1D_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: flgL
locus tag: SD1D_RS01820
old locus tag: SD1D_0367
so part of: sequence
location: 369179..370675
location: region:369179-370675:1
so has part: feature:369179-370675:1:exon
subclass of: SO_0000010

position:369179:1
position: 369179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370675:1
position: 370675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369179-370675:1:exon

SD1D_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: flgL
locus tag: SD1D_RS01820
old locus tag: SD1D_0367
inference: COORDINATES: protein motif:HMM:TIGR02550.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgL
translation: MRITNRMMTNNMLSNINKNKLNVSKLEEQYSTGKKIQRPSDDPIVTVRALKLRTNLSELKQYYEKNIPDAANWFDVTESALSTINEILKQINTYCVQGSSDTLTAENRNSIVQNLKQLKDQIYQEGNTNYAGRYVFSGYKTDSSLTFMEDVSTLKYDITENFHGKQIETVTRVSGAYELKDYEEADVTFDDTPQMENVYRIKLSYDSLDNTIMDGIYYTIPVGNGETQEHFISPVKTVSAYEADAYKPDDDPPTVNFIYETGEIILHESIYEELRLADNIKISYTKSSFNKGELKPEHYFDCVMTDSKRPEEDPIEFTKEKQEIQYEINYNQKLTINTEGSDAISHKIGRDIDDIIKSVDDVIRTENKIKEVENRMKDINLSQEEIERYEKMLGHLETELVLRKEVMQKAFSKGISSSNSEQDRVNVALADLGSRYFRLNLTENRLSSQKADFTELLSKNEDVDIVDTIINFNAAQLIYNASLSASSKIVQSSLLDFL
SIO_010081: SD1D_RS01820
subclass of: SO_0000673
so part of: SD1D_RS01820
location: 369179..370675
location: region:369179-370675:1
so has part: feature:369179-370675:1:exon

WP_058257343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369179-370675:1:exon

SD1D_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01825
old locus tag: SD1D_0368
so part of: sequence
location: 370713..371186
location: region:370713-371186:1
so has part: feature:370713-371186:1:exon
subclass of: SO_0000010

position:370713:1
position: 370713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371186:1
position: 371186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370713-371186:1:exon

SD1D_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01825
old locus tag: SD1D_0368
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198338.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar assembly protein FliW
translation: MLVKTRHFGEIDLDENKVINFEQGILGFEDYKRFTILYDNETGERPEVSWLQSLDEPSLAIPVISPFIVKPDYNPTVEDELLTPLGEITPDNIVVLVSITVPSDISKISANLRAPFVINVDTMKGCQVIVENTDYEIRYYFYEQLQAKKAEKEGRVC
SIO_010081: SD1D_RS01825
subclass of: SO_0000673
so part of: SD1D_RS01825
location: 370713..371186
location: region:370713-371186:1
so has part: feature:370713-371186:1:exon

WP_058257344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370713-371186:1:exon

SD1D_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: csrA
locus tag: SD1D_RS01830
old locus tag: SD1D_0369
so part of: sequence
location: 371180..371401
location: region:371180-371401:1
so has part: feature:371180-371401:1:exon
subclass of: SO_0000010

position:371180:1
position: 371180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371401:1
position: 371401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371180-371401:1:exon

SD1D_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: csrA
locus tag: SD1D_RS01830
old locus tag: SD1D_0369
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008117559.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon storage regulator CsrA
translation: MLALSRKAKESIMIGNDIEITVLEIKGDQVKIGINAPKSVPIYRKEIYLQILEANKEAASTTISGDDLKKLFQ
SIO_010081: SD1D_RS01830
subclass of: SO_0000673
so part of: SD1D_RS01830
location: 371180..371401
location: region:371180-371401:1
so has part: feature:371180-371401:1:exon

WP_058257345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371180-371401:1:exon

SD1D_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01835
old locus tag: SD1D_0370
so part of: sequence
location: 371547..371933
location: region:371547-371933:1
so has part: feature:371547-371933:1:exon
subclass of: SO_0000010

position:371547:1
position: 371547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371933:1
position: 371933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371547-371933:1:exon

SD1D_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01835
old locus tag: SD1D_0370
inference: COORDINATES: protein motif:HMM:NF015602.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein FlaG
translation: MALDVTKASTYQNNISPGGQTSVDTVKETITNQVNQMEQNIRPVEELGEDKSEVSDKHIKTEISKANSRLKNHNVRCEFAYHEETKRVTIKVFDKDTEEVIREIPPEKTLDMIQKMWELAGILVDERR
SIO_010081: SD1D_RS01835
subclass of: SO_0000673
so part of: SD1D_RS01835
location: 371547..371933
location: region:371547-371933:1
so has part: feature:371547-371933:1:exon

WP_058257346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371547-371933:1:exon

SD1D_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: fliD
locus tag: SD1D_RS01840
old locus tag: SD1D_0371
so part of: sequence
location: 371945..373903
location: region:371945-373903:1
so has part: feature:371945-373903:1:exon
subclass of: SO_0000010

position:371945:1
position: 371945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373903:1
position: 373903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371945-373903:1:exon

SD1D_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: fliD
locus tag: SD1D_RS01840
old locus tag: SD1D_0371
inference: COORDINATES: protein motif:HMM:NF018852.2
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0007155 - cell adhesion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar filament capping protein FliD
translation: MPPLRLSGLASGMDTEAVIEQLMKAERLKTTKVQNKITTTEWKQDKWKDLNKKIYSFYTNQLSKLRMQGNFDIKKATSSNTSKVEVTAANTAPEGTHIIKVKQLASSQFLTGAKIDKDINLNTKLSELGLKAEDGVTIHINAEKSVDFEVNSNSTVGDFINALRSAGLNANYDTVQKRFFISSKKSGVENQFTMYTSSETLKDKNAVLDFIGYGSLSSQDKNKVNDYLASYLKSEDSNEKNEILENLTKIKFNSEAFINEYMADEENKAAATAAVQERLKDEYPDGVIPQEQLEEEVQKELENAAKTAAQERFDSLKNELEPLMEKYADQSENPASESVSLSGLGLGEIRNDSGTIELSGVTGAVLVNAKDAIIEYNGAELTGSSNNFSVNGLNLNLKGITAVGDADKGIEDDVISISITNDTQAVYDMVKDFVKSYNELLTEMNEAYYAASARGYDPLTDEEKETMTEEQIKKWEDKIKDALLRRDDTLGSLLSMFRTSLSEGVKVGDKTYSLASFGIMSGDYSEKGILHIHGDEDFAKVASNDNKLMEALSNNPEEVRTVLNTIADKLYSSLMNKMKSTTLSSALTVYNDKELSKTLDNHKSDLKKLEAKLAKIEEKYYKQFAAMESAMAKMNAQSSSLMSMLGINTGQN
SIO_010081: SD1D_RS01840
subclass of: SO_0000673
so part of: SD1D_RS01840
location: 371945..373903
location: region:371945-373903:1
so has part: feature:371945-373903:1:exon

WP_058257347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371945-373903:1:exon

SD1D_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: fliS
locus tag: SD1D_RS01845
old locus tag: SD1D_0372
so part of: sequence
location: 373921..374289
location: region:373921-374289:1
so has part: feature:373921-374289:1:exon
subclass of: SO_0000010

position:373921:1
position: 373921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374289:1
position: 374289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373921-374289:1:exon

SD1D_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: fliS
locus tag: SD1D_RS01845
old locus tag: SD1D_0372
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198343.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar export chaperone FliS
translation: MAVNAAAIYRDNKILTATPAELTLMLYEGAIKFCNIALMAIEKDDIVKANTNLQKAQKIILELRATLDFNYSVANQFDMVYDYIYRRLVESNIKKDKEILEEALGYIREMRDTWKEVMKQAK
SIO_010081: SD1D_RS01845
subclass of: SO_0000673
so part of: SD1D_RS01845
location: 373921..374289
location: region:373921-374289:1
so has part: feature:373921-374289:1:exon

WP_058257348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373921-374289:1:exon

SD1D_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01850
old locus tag: SD1D_0373
so part of: sequence
location: 374305..374799
location: region:374305-374799:1
so has part: feature:374305-374799:1:exon
subclass of: SO_0000010

position:374305:1
position: 374305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374799:1
position: 374799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374305-374799:1:exon

SD1D_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01850
old locus tag: SD1D_0373
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELNDNNKKTYIQIIIDSLNKKYKVLNEVMQITSRQKAIIDADSFDEGLFMETISLKQEQIDKLSELDRGFELVYDRIREDLKTNSKEYQSEITSLKELVTKITDLNIKLQALEKSNKPKLESRLANKRQSIKKSRLSNQTVTNYYKTMSGGQEAQSYFYDKKN
SIO_010081: SD1D_RS01850
subclass of: SO_0000673
so part of: SD1D_RS01850
location: 374305..374799
location: region:374305-374799:1
so has part: feature:374305-374799:1:exon

WP_058257349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374305-374799:1:exon

SD1D_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01855
old locus tag: SD1D_0374
so part of: sequence
location: 374960..375928
location: region:374960-375928:1
so has part: feature:374960-375928:1:exon
subclass of: SO_0000010

position:374960:1
position: 374960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375928:1
position: 375928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374960-375928:1:exon

SD1D_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01855
old locus tag: SD1D_0374
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015559710.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellin
translation: MIIQHNMAAANTNRQLGITTGRLAKSTEKLSSGYKINRAGDNAAGLTISEKMRAQIRGLEQASTNAQDGISLIQTAEGALNETQAILQRMRELAVQAANDTNETADRTAIKKELDALIDEVDRIAGQTEFNKQRLLDGTFKKDGGKELNIQVGANAEQKISFNIESMTAAALNLKSDTDPETEPVTEPETEPETEPETEPETEPETEPVTEPETDPVTDSNILVKVDSFKNAEAAITTIQEALDAVSAARSDLGAIQNRLEHTIANADNTAENLQAAESRIRDVDMAKEMVKFAKDTILQQAAQSMLAQANQQTQGVLALLQ
SIO_010081: SD1D_RS01855
subclass of: SO_0000673
so part of: SD1D_RS01855
location: 374960..375928
location: region:374960-375928:1
so has part: feature:374960-375928:1:exon

WP_058257350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374960-375928:1:exon

SD1D_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: tnpA
locus tag: SD1D_RS01860
pseudo: true
so part of: sequence
location: 376116..>376433
location: region:376116-376433:1
so has part: feature:376116-376433:1:exon
subclass of: SO_0000010

position:376116:1
position: 376116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376433:1
position: 376433
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376116-376433:1:exon

SD1D_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: tnpA
locus tag: SD1D_RS01860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011066964.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
SIO_010081: SD1D_RS01860
subclass of: SO_0000673
so part of: SD1D_RS01860
location: 376116..>376433
location: region:376116-376433:1
so has part: feature:376116-376433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376116-376433:1:exon

SD1D_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01865
old locus tag: SD1D_0375
so part of: sequence
location: 376765..377817
location: region:376765-377817:1
so has part: feature:376765-377817:1:exon
subclass of: SO_0000010

position:376765:1
position: 376765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377817:1
position: 377817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376765-377817:1:exon

SD1D_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01865
old locus tag: SD1D_0375
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006855738.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MISICIIVKNEEKLLNLCLKHLIPLNYEIVVVDTGSTDGTKDVAINYTDKVYDYPWNQDFSAARNFAISKASNDYIFMIDSDEILASCDKKELETYIQRYPDGIGRVMIISEYYRDNEKYSVKNQVSRIFSKKKYCYQGRIHEQVVPIEGEIATIYDAPIRIYHRGYDGDLETRRKKTERNISLLKKELEDKGDDPYILYQLGKSYYMQEDYFASCEVFSKALYFDLDPNLEYVQDMVESYGYALLNSQQYETAMQLLGVYDEFAVNADFLYLMGLIYMNNAMFTEAIGEFIKASQMKVYKMDGVNSYRAYYNIGVVYECLGLVDKAIKYYKKCGNYSLAVKRLNTLVYD
SIO_010081: SD1D_RS01865
subclass of: SO_0000673
so part of: SD1D_RS01865
location: 376765..377817
location: region:376765-377817:1
so has part: feature:376765-377817:1:exon

WP_058257351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376765-377817:1:exon

SD1D_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01870
old locus tag: SD1D_0376
so part of: sequence
location: 377877..378251
location: region:377877-378251:1
so has part: feature:377877-378251:1:exon
subclass of: SO_0000010

position:377877:1
position: 377877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378251:1
position: 378251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377877-378251:1:exon

SD1D_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01870
old locus tag: SD1D_0376
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLLITILEALDCILDNGDGWEEYVTLCVEALEAICGFIDKKDKSISLDILSKDIRLLREINLSEGMKKSVKNIIKQVIDDILYQARVIKAKKNRWRAVFLPYNASMWTSLVRVLLTKYEENEI
SIO_010081: SD1D_RS01870
subclass of: SO_0000673
so part of: SD1D_RS01870
location: 377877..378251
location: region:377877-378251:1
so has part: feature:377877-378251:1:exon

WP_058257352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377877-378251:1:exon

SD1D_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01875
old locus tag: SD1D_0377
so part of: sequence
location: complement(378416..379465)
location: region:378416-379465:-1
so has part: feature:378416-379465:-1:exon
subclass of: SO_0000010

position:378416:-1
position: 378416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379465:-1
position: 379465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378416-379465:-1:exon

SD1D_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01875
old locus tag: SD1D_0377
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003868888.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MAIIPLNVVCPRCFSKNLYRFGKDNEGFQKYQCKQCKRQFAPDNPSFNMRSRRQRKYPDCPACGKSTFLHHDYTYYSNFRCSDKKCNHSFKVPKLINVKLPSSEFKPQNFSFKGMRHPLFIVLCALNYYFCDNSTTRKVAQTLYMVHQVKVSHVTISKWVKRFAPIFKMIADDRLSKINLCDSDEWHFDETYIKISGKDYYLWLALDAETRLVLDFHLSPNRDSNSAHALLANCRRKFGQPRYAVISDRYYAYQQPASLFFPQVEHIRVEDFDDLINNNVLEAFNGQFKAWYKPKRGFNSFESANRIIATYIFFYNFIRPHSSLNGLTPAQVAGIEYSEKERLFWLLVA
SIO_010081: SD1D_RS01875
subclass of: SO_0000673
so part of: SD1D_RS01875
location: complement(378416..379465)
location: region:378416-379465:-1
so has part: feature:378416-379465:-1:exon

WP_058257353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378416-379465:-1:exon

SD1D_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01880
old locus tag: SD1D_0378
so part of: sequence
location: 379628..380428
location: region:379628-380428:1
so has part: feature:379628-380428:1:exon
subclass of: SO_0000010

position:379628:1
position: 379628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380428:1
position: 380428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379628-380428:1:exon

SD1D_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01880
old locus tag: SD1D_0378
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNRQEKTDLQLILLRVIENQNKLSSIDLIRYIENNINHRVLSSCGVRQNVTVLYELLGYRTGKLNHYYRLADKDEYKVAIINKKNIIPGKPGNYKLKHITSFVELSNLIDLKKYKNMVPYKDEWCIRHRYYESQIHKYKVYVIDKGNHIYDSLIVMREIEIRGTKICKIVDFVGIDEDIAGLYSFIDDMMKQNGYEYIEFYNLGISKDIMKAAGFVLRSDSDNNIIPRLFEPFVQENKDIYYFANDFDSLHMYCGDADQDRANKL
SIO_010081: SD1D_RS01880
subclass of: SO_0000673
so part of: SD1D_RS01880
location: 379628..380428
location: region:379628-380428:1
so has part: feature:379628-380428:1:exon

WP_058257354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379628-380428:1:exon

SD1D_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01885
old locus tag: SD1D_0379
so part of: sequence
location: 380575..382509
location: region:380575-382509:1
so has part: feature:380575-382509:1:exon
subclass of: SO_0000010

position:380575:1
position: 380575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382509:1
position: 382509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380575-382509:1:exon

SD1D_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01885
old locus tag: SD1D_0379
inference: COORDINATES: protein motif:HMM:NF037320.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRYCKNVLKIIFPLVMMLLLFFLPANDTAYGASSVTIDTVDYKEENIIVNNKGNSRIYFATENEAARNSWEVIPADDNEDDTTSIDFSWVSPTSDQVIVIKGEDNVQRRVTLKARAKRLEVSISYDKISSLKKSDNIAKLLNIMSSAGTGDDPINYYDLEWKKGENGSWKDTSTLTVAQLEKLQVKGADLYFRIKAENDVTQGTNYPDGTKGRRVSKEVRLKIAKKASPATVGVNGEKFTAQIKYGKEYRVTYDGKTGSWVKVTNKSIRELALADILKNGMDGLTPETRFPAMLIEVRDYATANRAASKISEISLKEQRVLSGQIIEDTVASTDEADPNIYISYNSSASISVTIPSASKDNPYQYSIVKPGENFDISRASWTTISKSSAVRILASRAPEGSHLYIRQKEIKSKAATKTTPAVDFELASTYLKYKVEYPTGPKIDEKSFTFVKGITEEISFNIRLNKIGKLPFETKIKSIKYGSRELNFTCTPDKIEATDPNVEYTMKVSLDVNTLNSMPNSYSRALNITFENGTLDKTSVKLAIQNPTPATALTTTITKGKTTGSTSVRVISSIRQGNQLVYTITDTKVEGLHIENVINDGIGFVQDQDITVSAGKYLTVYEINSDTKKVVRYRCIQITSQHIS
SIO_010081: SD1D_RS01885
subclass of: SO_0000673
so part of: SD1D_RS01885
location: 380575..382509
location: region:380575-382509:1
so has part: feature:380575-382509:1:exon

WP_058257355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380575-382509:1:exon

SD1D_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01890
old locus tag: SD1D_0380
so part of: sequence
location: 382534..383442
location: region:382534-383442:1
so has part: feature:382534-383442:1:exon
subclass of: SO_0000010

position:382534:1
position: 382534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383442:1
position: 383442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382534-383442:1:exon

SD1D_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01890
old locus tag: SD1D_0380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEKIKFIFEQNISLLQQLDRAVCYFRKQQHDLALGIVADSMDLINNSIEAIITDSEYFNLVSTDSVLGMLSSILDSYKRKDYILLADLLEIKLISFINKVQEHIIGKEEIAFDKDRYQENLNWLIKHSVGIDRLIDYPMDPQLLLKEGYRVEFSFGGLMTLVAENNNSQFYFHTNGRITFEALMLAKHWYKKEASRYILYGLGFGYHIRELLAISPRSNITVYESDLNVIMLACAFANIKDIFASGRVDLIYDPDYIWLGERLRNLSKKESFCVHYPSFQNIRNDMGIKLTESYVSWSKNI
SIO_010081: SD1D_RS01890
subclass of: SO_0000673
so part of: SD1D_RS01890
location: 382534..383442
location: region:382534-383442:1
so has part: feature:382534-383442:1:exon

WP_058257356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382534-383442:1:exon

SD1D_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01895
old locus tag: SD1D_0381
so part of: sequence
location: 383493..383969
location: region:383493-383969:1
so has part: feature:383493-383969:1:exon
subclass of: SO_0000010

position:383493:1
position: 383493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383969:1
position: 383969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383493-383969:1:exon

SD1D_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01895
old locus tag: SD1D_0381
EC number: 3.4.23.36
inference: COORDINATES: protein motif:HMM:NF013421.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MIFFLIALFVFLLDWNIKNYIEDKFHMGKRKDIFNGKVTIKKQYNSGFCLNFLDNKKELVKKVTAIVFGVLALAYVIIIPGKHKSMKKLGLSLCLGGAASNVLDRFKRGYVIDYFTINIKPIKNIVFNLADIFIFIGSFITFLTSLSDGSSIHPNIEE
SIO_010081: SD1D_RS01895
subclass of: SO_0000673
so part of: SD1D_RS01895
location: 383493..383969
location: region:383493-383969:1
so has part: feature:383493-383969:1:exon

WP_058257357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383493-383969:1:exon

SD1D_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: ftsH
locus tag: SD1D_RS01900
old locus tag: SD1D_0382
so part of: sequence
location: 384190..386247
location: region:384190-386247:1
so has part: feature:384190-386247:1:exon
subclass of: SO_0000010

position:384190:1
position: 384190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386247:1
position: 386247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384190-386247:1:exon

SD1D_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: ftsH
locus tag: SD1D_RS01900
old locus tag: SD1D_0382
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015543402.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MENKNDNKQNKNGLPNKSFIIITLLSALFLWYMISFVQRQIEESTNIEKAYNEFIYMLENDQLKEVFFVDDKIKFVPKEQPNNYDITYYTGNLYDQELYDKLYEAYKRDGLEYNRKPVNNKTTIFETILSMLLPFILIYIVMWFLFKAISKNSGGVMGIGKSNAKVYVEKTTGVTFKDVAGQEEAKESLTEIVDFLHNPAKYTRIGAKLPKGALLVGPPGTGKTLLAKAVAGEAKVPFFSLSGSDFVEMFVGVGASRVRDLFKQAQDSAPCIIFIDEIDAIGKSRDGHYGNDEREQTLNQLLANMDGFDSSKGLVVLGATNRPEVLDKALLRPGRFDRRIIVDKPDLKGRIDILKVHAKNVLMHDSVDLEAIARATSGAVGSDLANMINEAAILAVKQGRTVVTQEDLFESVEVVIAGKEKKDRILSKEEKRIVAYHEVGHALVTALEKHSEPVQKITIVPRTMGSLGYVMQVPEEEKYLMSKDEMLTRIVTFFGGRAAEELVFGSVTTGASNDIEQATALARSMVTQYGMSDKFGLMGLESIENRYLDGRPVLNCSDQTAGEIDKEVMKILKECYDRAKMLLSQNREVLDKIAEYLIAKETITGEEFMNLYREVKGEDLIKADTDQKKDDVRDDVSKEEIPSKVNEAEDNTKEESVSETDKIDLNNNSVEKSISEADKDDTTVE
SIO_010081: SD1D_RS01900
subclass of: SO_0000673
so part of: SD1D_RS01900
location: 384190..386247
location: region:384190-386247:1
so has part: feature:384190-386247:1:exon

WP_058257358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384190-386247:1:exon

SD1D_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: uvrC
locus tag: SD1D_RS01905
old locus tag: SD1D_0383
so part of: sequence
location: 386404..388275
location: region:386404-388275:1
so has part: feature:386404-388275:1:exon
subclass of: SO_0000010

position:386404:1
position: 386404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388275:1
position: 388275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386404-388275:1:exon

SD1D_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: uvrC
locus tag: SD1D_RS01905
old locus tag: SD1D_0383
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006855235.1
GO component: GO:0009380 - excinuclease repair complex [Evidence IEA]
GO function: GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrC
translation: MFNIEEELKMLPDKPGVYIMKDKADNIIYVGKAIVLKNRVRQYFQNSRNHTVKIKRMVENIDHFEYIVTDSEVEALVLECNLIKEHRPKYNTMLKDDKTYPYIRVTVSEDYPRVLFSRQMKRDKSKYFGPYTSSGAVKDILELLRKIYKIRTCNRNLPRDIGKERPCLYYYMGQCDAPCQGFISKEEYGKNIEQVIQFLSGNYNPVVKMLEDRMHEAAAKMEYEKAATMRDLLGSVRQIMNKQKITYTDQADRDIIAFARNKDEAVVQTFFIRGGKLIGRDHFYLTGVEDESDSGVITSFIKQFYAGTPYIPKEIFLETEPEESDILSRWLSEKRGQKVYIRVPKKGEKEKLVELAKKNAILILNKDAEKLKREEARTTGALKELADYLDLSQISRIESFDISNTAGFAPVGSMVVFEQGKPKKSDYRKFKIKSIEGSDDYGAMYEMLTRRFTHGMRELEEMKEKNLDESYGSFTKYPDLILMDGGKGQVNVALRVLDELKLDIAVCGMVKDDNHRTRGIYYRNRELPIDKSNELFKLITRIQDETHRFAIEYHRSLRKKQQVHSILDDIKGIGPTRRRALMKHFQTLDSIKNADIEELMKVPSMNRAAAEEVYNFFHKPKTQ
SIO_010081: SD1D_RS01905
subclass of: SO_0000673
so part of: SD1D_RS01905
location: 386404..388275
location: region:386404-388275:1
so has part: feature:386404-388275:1:exon

WP_058257359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386404-388275:1:exon

SD1D_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: hprK
locus tag: SD1D_RS01910
old locus tag: SD1D_0384
so part of: sequence
location: 388379..389311
location: region:388379-389311:1
so has part: feature:388379-389311:1:exon
subclass of: SO_0000010

position:388379:1
position: 388379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389311:1
position: 389311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388379-389311:1:exon

SD1D_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: hprK
locus tag: SD1D_RS01910
old locus tag: SD1D_0384
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005331358.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HPr(Ser) kinase/phosphatase
translation: MYTVDLVQLIEKMNLENCTPDIDIKRIKISQPDVNRPALQLAGFFDHFDSERVQIIGYVEHAYMQTVSLEKRNEIMSKLMDYKVPCIVFCRNIEVSDELIKIATEKEVPILRSAKTTSSFMAEVIRWLNVELAPRISIHGVLVDVYGEGILITGESGIGKSEAALELIKRGHRLVADDVVEIKKVSDETLIGTAPDITRHFIELRGIGIIDVKTLFGVESVKNTQGIDLVIKLEEWSRDKDYDRFGLDEQHIEILGNKVVCYSIPIRPGRNLAIICESAAVNHRQKKMGYNAAQELYQRVTNKIRNSTKK
SIO_010081: SD1D_RS01910
subclass of: SO_0000673
so part of: SD1D_RS01910
location: 388379..389311
location: region:388379-389311:1
so has part: feature:388379-389311:1:exon

WP_058259159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388379-389311:1:exon

SD1D_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01915
old locus tag: SD1D_0385
so part of: sequence
location: 389323..390255
location: region:389323-390255:1
so has part: feature:389323-390255:1:exon
subclass of: SO_0000010

position:389323:1
position: 389323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390255:1
position: 390255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389323-390255:1:exon

SD1D_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01915
old locus tag: SD1D_0385
EC number: 2.7.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004849576.1
GO function: GO:0004340 - glucokinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ROK family glucokinase
translation: MEDDVVKYCFGVDIGGTGIKVGLFNSDGVMLDKWVIATKRTEDGKDVLRDAAAFIESKLEEKAISKEEVIGIGVGIPGPVKDNGEVLELPNLGIGHFNIEEEMSKMTGLKVKAGNDANVAALGEQWMGSGKGFDSMVMVTLGTGVGGGIIYKGKIVAGSGGAGGEIGHLPVDYNETSSCGCGKKGCLEQYASATGIVRIAKKYMPNLDDISAKTVFDMAKEGDELALKVVDEACRYLGIALAQVAQTLDPEAFVIGGGVSKAGDILIDHIKKHYIPNVMDALKDRVFIIASLGNDAGMYGCARLILSSDV
SIO_010081: SD1D_RS01915
subclass of: SO_0000673
so part of: SD1D_RS01915
location: 389323..390255
location: region:389323-390255:1
so has part: feature:389323-390255:1:exon

WP_058257360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389323-390255:1:exon

SD1D_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: murB
locus tag: SD1D_RS01920
old locus tag: SD1D_0386
so part of: sequence
location: 390306..391229
location: region:390306-391229:1
so has part: feature:390306-391229:1:exon
subclass of: SO_0000010

position:390306:1
position: 390306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391229:1
position: 391229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390306-391229:1:exon

SD1D_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: murB
locus tag: SD1D_RS01920
old locus tag: SD1D_0386
EC number: 1.3.1.98
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019162506.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate dehydrogenase
translation: MEDLLLKELYKILKKEQIKIKEPMSQHTSLRIGGEADYMVFPSCVDEIRQVVLLCKTHNIPYYIMGNGSNLLVSDMGYRGLIIKLASNFSDVVVNDDNTVHAQAGVLLSKLSSVIAREELTGFEFAAGIPGTLGGAVTMNAGAYGGEMKQCLLSAKVMDSEGEIFTLDNEGLKLGYRSSILQKNNLCLLEAVMKFNKGDKQQIWDKIHELNSQRRLKQPLDQFSAGSTFKRPQGYFAGKLISDAGLKGYQIGGAAVSEKHCGFLINKDNASAKDFMALIKDVSRIVYEKFGVRLEPEVKFLGNFDMD
SIO_010081: SD1D_RS01920
subclass of: SO_0000673
so part of: SD1D_RS01920
location: 390306..391229
location: region:390306-391229:1
so has part: feature:390306-391229:1:exon

WP_058257361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390306-391229:1:exon

SD1D_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: rapZ
locus tag: SD1D_RS01925
old locus tag: SD1D_0387
so part of: sequence
location: 391248..392099
location: region:391248-392099:1
so has part: feature:391248-392099:1:exon
subclass of: SO_0000010

position:391248:1
position: 391248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392099:1
position: 392099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391248-392099:1:exon

SD1D_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: rapZ
locus tag: SD1D_RS01925
old locus tag: SD1D_0387
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006855231.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNase adapter RapZ
translation: MRFVIVTGMSGAGKSSVLKMLEDTGFFCVDNLPIKLVKKFVKLIMHGHHNKVALGLDIRSGQYLEELDEILNDMKKAGYPYEILFLDCSAEVLIKRYKETRRLHPLSQTGRVDKGIELERERLEFLRKKADVIIDTSHLLIRELKAHIDKIYVEDKQFKNFMIMMLSFGFKYGIPSDADLVFDVRFLPNPFYIPELKHKTGMDSQVSNFVMNSEASGQFLDKLEDMLTFLIPHYISEGKNQLVVAIGCTGGKHRSVTLNNEISKRMAGLGYGIKTEHRDIEKD
SIO_010081: SD1D_RS01925
subclass of: SO_0000673
so part of: SD1D_RS01925
location: 391248..392099
location: region:391248-392099:1
so has part: feature:391248-392099:1:exon

WP_058257362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391248-392099:1:exon

SD1D_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: whiA
locus tag: SD1D_RS01930
old locus tag: SD1D_0388
so part of: sequence
location: 392127..393107
location: region:392127-393107:1
so has part: feature:392127-393107:1:exon
subclass of: SO_0000010

position:392127:1
position: 392127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393107:1
position: 393107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392127-393107:1:exon

SD1D_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: whiA
locus tag: SD1D_RS01930
old locus tag: SD1D_0388
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006862778.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0043937 - regulation of sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein WhiA
translation: MSFSKKVKEELAGQISDARHCRLAEIAAIHAFGGLLIQDKSNLYLKLQTENLTVARKYFTLLKKTFNISIDVSVKQNLNSKDSQTYIIIVKNKEMVSRILQATKQNPAEAEDGKIQSPGQLVVQNTCCKRAFIRGAFLLSGSMSNPKKSYHLEFVTDDILKAEMLKDVICTFSIDAKIIQRKRNFVVYIKEGSQIVDLLNVMEAHVALMDLENVRILKEMRNQVNRQVNCEAANISKTVTAATKHIDDILYIRDNVGFGNLAKGLEEIAKLRVEYPEASLKELGTMLSPPISKSGVNHRLRKLSMIAEYFREHKEENINDKKGNSN
SIO_010081: SD1D_RS01930
subclass of: SO_0000673
so part of: SD1D_RS01930
location: 392127..393107
location: region:392127-393107:1
so has part: feature:392127-393107:1:exon

WP_058257363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392127-393107:1:exon

SD1D_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01935
old locus tag: SD1D_0389
so part of: sequence
location: 393082..393336
location: region:393082-393336:1
so has part: feature:393082-393336:1:exon
subclass of: SO_0000010

position:393082:1
position: 393082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393336:1
position: 393336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393082-393336:1:exon

SD1D_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01935
old locus tag: SD1D_0389
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018597868.1
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HPr family phosphocarrier protein
translation: MIRKEIVINIPNGLEARPVALLVQVASQYESSIFVECDEKKINAKSIMGMMSLGLASGEKVFVTAEGPDEEEAIKNIEKYLSSK
SIO_010081: SD1D_RS01935
subclass of: SO_0000673
so part of: SD1D_RS01935
location: 393082..393336
location: region:393082-393336:1
so has part: feature:393082-393336:1:exon

WP_058257364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393082-393336:1:exon

SD1D_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01940
old locus tag: SD1D_0390
so part of: sequence
location: 393573..394991
location: region:393573-394991:1
so has part: feature:393573-394991:1:exon
subclass of: SO_0000010

position:393573:1
position: 393573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394991:1
position: 394991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393573-394991:1:exon

SD1D_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01940
old locus tag: SD1D_0390
inference: COORDINATES: protein motif:HMM:NF013672.2
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MEGRRIRPKKKRSIKRMGTILLFEILLLSLLAGSYYIISKTRRNNNNPGNITTEDEQDDNNGKNKLTPEEEEALREQERLQQEIAERNEIIEKAKRMALSYDYDGAIELIKSYQGEAGDYSVYTALVDAVNELEAEKSKLVLYGGAYTSVTQVNHIFFHSLIADNSKAFDGDYDSVGYNMYMTTIYEFEKMMEKMYQDGYVLVSIHDLVKKVTDENGKTKYVEAEIYLPPGKKPFVLSQDDVNYYEYMDGDGFASRIVIDEDGKPTCEMILDDGSVVQGPFDIVPILDAFVEEHPDFSYKGAKGILALTGYEGALGYRTNDPTSPTYEQDKETVKEVARVLKENGWEFACHSWGHKNMGEKSYEFVKTDITRWLDEVAPLIGPTDILIFPFGVDIETTIGHYESDKYHFLKEVGFDFYCGVYSKPWMHVKNDYVRMTRRPLDGQAMLQFPERLADLFSVEEVIDPERPARNW
SIO_010081: SD1D_RS01940
subclass of: SO_0000673
so part of: SD1D_RS01940
location: 393573..394991
location: region:393573-394991:1
so has part: feature:393573-394991:1:exon

WP_058257365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393573-394991:1:exon

SD1D_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01945
old locus tag: SD1D_0391
so part of: sequence
location: 395172..398660
location: region:395172-398660:1
so has part: feature:395172-398660:1:exon
subclass of: SO_0000010

position:395172:1
position: 395172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398660:1
position: 398660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395172-398660:1:exon

SD1D_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01945
old locus tag: SD1D_0391
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006779924.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit alpha
translation: MSFTHLHLHTQYSLLDGSGKIKEMVLRAKELGMDSLAITDHGVMYGVIDFYKACLSENIKPIIGCEVYVAPNSRFDREPGASEDRYHHMVLLAENNIGYQNLMKIVSIGFLEGFYYKPRIDKEILSRYSQGIIALSACLGGEIPGYLRRGFYKEAKDAALKYREIFGKDNFFLELQDHGIPEQRTVNQGLIRISNETGIKLVATNDVHYTYAEDADSHDVLLCIQTQKKVTDENRMRYEGGQYYLKSPQEMLEIFPYAKEAVENTYEIAKRCNVTITFGEYKLPVYPVPAPYTSFEYLKHLCKEGMKDRYGTVDEELWERLDYELKTINNMGFVDYFLIVWDFIKYAKDHGIMVGPGRGSAAGSIVAYALKITDIDPIKYNLLFERFLNPERLTMPDIDIDFCFERRQEVIDYVTEKYGKDKVAQIVTFGTMAARAVIRDVGRALDLPYSQVDTVAKMIPNEIGITIEKALKLNPDLSRLYEEDEDIKRLIDMSKRLEGLPRHTSMHAAGVVIGKDSIVEYVPLTRSSDDSITTQFTMVTLEELGLLKMDFLGLRTLTVIQNAVALVNKNTDISDKFDINKIDYNDDKVYELIGSGKTEGIFQLESSGMKSFMKELKPRSLEDVIAGIALYRPGPMDFIPKYIKGKNETGQITYDCPQLEHILAPTYGCIVYQEQVMQIVRDLAGYSYGRSDLVRRAMSKKKEDVMIKERQTFIYGNEEDNIPGCIKNGIPESVANHIFDEMLDFAKYAFNKSHAAAYAVISYQTAYLKRYYPVEFMAALMTSVIDNPAKVSQYIYNCRQMDIDILPPDINEGDAVFTVHKGAIRYSLAAIKGVGRPVIESIVAEREAGGPYTSLKDFASRLSGKEVNKRTVESFIKAGVFSNLHSNRRQLMMSYIQILDQVAEDKKRNLTGQLNLFDFAGEEVKQEFDFNMPNVEEYSKEEILAFEKEVLGIYISGHPLDDYMDSLKKNVTAYSYDFILDEEIGKAKVEDGSFHTLGGMITSKTIKTTRTNSIMAFITLEDMFGTVEVIVFPRDFDRYKHILDIDAKVFIRGRVTTEEDKDAKLICQEIIPFNELPKEIWLRFRNHSDYKKSELELYSILDGYDGNDSVIIYCEAEKIMKRLPKSKNVSAKDELITKLKEVFTENNVRIVEKQLDSVAKIN
SIO_010081: SD1D_RS01945
subclass of: SO_0000673
so part of: SD1D_RS01945
location: 395172..398660
location: region:395172-398660:1
so has part: feature:395172-398660:1:exon

WP_058257366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395172-398660:1:exon

SD1D_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: pfkA
locus tag: SD1D_RS01950
old locus tag: SD1D_0392
so part of: sequence
location: 398693..399661
location: region:398693-399661:1
so has part: feature:398693-399661:1:exon
subclass of: SO_0000010

position:398693:1
position: 398693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399661:1
position: 399661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398693-399661:1:exon

SD1D_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: pfkA
locus tag: SD1D_RS01950
old locus tag: SD1D_0392
EC number: 2.7.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198366.1
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phosphofructokinase
translation: MDNKVNVIGVLTSGGDAPGMNAAIRAVVRTALKEGIKVKGIRRGFLGLLEEDIYDMEYKSVSDIINRGGTILHTARCPEFVKPEVVEKAAQVCKKHGIEGLVVIGGDGSFRGAADLAKHGINTVGVPGTIDLDIACTDYTIGFDTAVNTAIQTVDKVRDTSTSHERCSIIEVMGRHAGFIALWCGIANGAEDILIPERYDYDEQHIIDKINRRRETGKKHYIIINAEGIGDSHAMAERIEKATGMETRATIIGHAQRGGSPTARDRVYAAAMGAKAVDLLRKGASNRVVAHVKGEFVDYDIAEALAMTKDINQYMYDLSKRL
SIO_010081: SD1D_RS01950
subclass of: SO_0000673
so part of: SD1D_RS01950
location: 398693..399661
location: region:398693-399661:1
so has part: feature:398693-399661:1:exon

WP_058257367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398693-399661:1:exon

SD1D_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01955
old locus tag: SD1D_0393
so part of: sequence
location: 399700..401445
location: region:399700-401445:1
so has part: feature:399700-401445:1:exon
subclass of: SO_0000010

position:399700:1
position: 399700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401445:1
position: 401445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399700-401445:1:exon

SD1D_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01955
old locus tag: SD1D_0393
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004221502.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNKKTKKFLSYYKPYLGLFMADMFFALLASSISLIYPMIVRYITNEILVKYDISESAPIIMKLLFVMLALAAIEFLSTFFTAYKGHMMGAKMEYDMRNDIFEHFQKLSFSFYDNQKIGQLMTRITNDLFDVTELCHHGPEDIIISSIKFIGAFFILININLPLTLLVFSFIPLMLVFALFMRGRMRRAFKRNREKIADINAQIEDNLSGIRVVKSFANEAVEMSKFKEGNNKFIDSKRNSYLNMGIFHSGLTLFTALINVAVIAGGGLFIAKKIINVGDLLTFLLYVNLLVDPVKKLINFTEQFQNGMSGFSRFYEILEIEPDIVDKPDAISLNEVKGEIEFKNVAFKYNDAKEDVFRNINLKVKAGEYIALVGSSGVGKTTMCSLIPRFYEVSEGLITIDGIDIKDIKLKSLRKNIGIVQQDVYLFAGTVMDNIRYGNANATEEDVIRAAKNANAHDFIMELPEGYYTDIGQRGVKLSGGQKQRLSIARVFLKNPPILIFDEATSSLDNESEKVVQESLEKLAKNRTTFVIAHRLSTIKNAQRIIVLAEDGIKETGTHEELLAKEGVYAGLYRLAYSSQE
SIO_010081: SD1D_RS01955
subclass of: SO_0000673
so part of: SD1D_RS01955
location: 399700..401445
location: region:399700-401445:1
so has part: feature:399700-401445:1:exon

WP_058257368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399700-401445:1:exon

SD1D_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01960
old locus tag: SD1D_0394
so part of: sequence
location: 401701..402249
location: region:401701-402249:1
so has part: feature:401701-402249:1:exon
subclass of: SO_0000010

position:401701:1
position: 401701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402249:1
position: 402249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401701-402249:1:exon

SD1D_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01960
old locus tag: SD1D_0394
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008909909.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MQKDMQNDNSQYSPAYEIEDLIRQYGNDVLRIAYMYVKDIHTAEDIFQEVFIKVNNKLSTFGGYSSIKTWIVRITINTCKDYLKSAYKRRVVPMMEYQEDAIISDSDYEQIEKQDTSDLIKKSVLSLPAKYKDVVICIYFQDMSIAEAAKALNIAEGTVKSRLSRARSKLKNMLEGRVSDEF
SIO_010081: SD1D_RS01960
subclass of: SO_0000673
so part of: SD1D_RS01960
location: 401701..402249
location: region:401701-402249:1
so has part: feature:401701-402249:1:exon

WP_058257369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401701-402249:1:exon

SD1D_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01965
old locus tag: SD1D_0395
so part of: sequence
location: 402239..403096
location: region:402239-403096:1
so has part: feature:402239-403096:1:exon
subclass of: SO_0000010

position:402239:1
position: 402239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403096:1
position: 403096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402239-403096:1:exon

SD1D_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01965
old locus tag: SD1D_0395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNFKQNNNNEQKMDEFNIKHHLNTSLDQKGISVSEDLINRTLEAINKQGKTKQEEDHRPLITKIRLLMKVAAAVLVFMVGLSAIHLFNPSGLKQKSVNEEAKSFTLDGKNDIAISDRAGELDNEIATKEAQEIDDQVNDTLGSWDNGTVEEDNKKEPGTNELTSLSNYELSFTDITAIKEEEVKSITVKSHDKDIRVQLKEPVDIEKFYSVMENYRFKYDEADDSTVEYTIKLVGKDNESHIIIGLYTITVDNTHRDVASHSKYSVLDTSLLIDDLKEFLASYDN
SIO_010081: SD1D_RS01965
subclass of: SO_0000673
so part of: SD1D_RS01965
location: 402239..403096
location: region:402239-403096:1
so has part: feature:402239-403096:1:exon

WP_058257370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402239-403096:1:exon

SD1D_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01970
old locus tag: SD1D_0396
so part of: sequence
location: complement(403169..403444)
location: region:403169-403444:-1
so has part: feature:403169-403444:-1:exon
subclass of: SO_0000010

position:403169:-1
position: 403169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403444:-1
position: 403444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403169-403444:-1:exon

SD1D_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01970
old locus tag: SD1D_0396
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFRKFVLGSLSVASVAAGAYYVYKNFIKKDSDDDLDEFDDDFDDLDEDEEDDKEKVSGKSTTREYVQIQMEEESKEAIEDSEEAKEEDL
SIO_010081: SD1D_RS01970
subclass of: SO_0000673
so part of: SD1D_RS01970
location: complement(403169..403444)
location: region:403169-403444:-1
so has part: feature:403169-403444:-1:exon

WP_058257371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403169-403444:-1:exon

SD1D_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01975
old locus tag: SD1D_0397
so part of: sequence
location: 403708..404052
location: region:403708-404052:1
so has part: feature:403708-404052:1:exon
subclass of: SO_0000010

position:403708:1
position: 403708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404052:1
position: 404052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403708-404052:1:exon

SD1D_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01975
old locus tag: SD1D_0397
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007865390.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1622 domain-containing protein
translation: MEQLHIWLDLLCETATLMFEFIGVIILILSGIIGIYNYIKKSPYTRLELAKGMALGLEFKMGGEILRTVGVTGWAEIGMVAGIILLRAALSFLIHWEIKAEEREFEALEKKEDK
SIO_010081: SD1D_RS01975
subclass of: SO_0000673
so part of: SD1D_RS01975
location: 403708..404052
location: region:403708-404052:1
so has part: feature:403708-404052:1:exon

WP_058257372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403708-404052:1:exon

SD1D_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01980
old locus tag: SD1D_0398
so part of: sequence
location: 404207..406765
location: region:404207-406765:1
so has part: feature:404207-406765:1:exon
subclass of: SO_0000010

position:404207:1
position: 404207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406765:1
position: 406765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404207-406765:1:exon

SD1D_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01980
old locus tag: SD1D_0398
inference: COORDINATES: protein motif:HMM:NF014427.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ig-like domain-containing protein
translation: MKNNPGKKTAFSMVLALLLTSIFWFSIDKSAYGASPSFVESKVEIIGEDQTYQLEIKDKVAGSKYKWSSSNSKVARVSSKGIVTSVGKGTATIKCKITYPTNKSKTIKCKVTVIIPATKIRINNATEENGAHILKLGETYNFNRDITPSNSSDKTYWSIGGGDPECIRVVNSSNGIVEGTKAGKVVLVATAARKATKAEAKKSIVNDAIIIEVVKPSATVNSASIISNNEIKVVFDSPIDEKTVIGQNNILLDSIDITLKRNIKGVLAGDPGKLTAKLSDDKKTLIITSSNRLEGEYGINFTSKIKTVDGEAIEEYYKQIRYEDTILPEIADIILDDSGMIVTIVFSEAIDFSGLKVSNAAIVPGSSSSPADPLTISILNNKNNYIPSQDKKSLTINLSNIAYSDYDKVFTVVLSGIKDLAGNAPANYNLPVYLRTDTRPKPQARLISIARTSYNTLTAIFDRSIQYGGYATINNGSTMVGIVDSQNPKKVHYTLSEADALKTGIQTVSLIGWQAYNVDPSDTTSYKQHTRTISFNVDKSNPVLLSQEFDPETNILTLTYNKEVVLWSDSGVFNASLVTVTDEIRSNYNLTYSKLATDDPKVIKLQIGNMTLIGNYTFTLSKNFVMDTFRNYSTERTITISNSDGVDLELPGPYMISQSTTNPSQIYLDFNDMLDIESAQNVTNYGIPGVTIISAKLEKNSKYEGARVVLTLADESIDISMERPIKISGVKGYNGIYGPIIDYTSNVYLRDNKKPYYVGPPVFDKNKPNEIRLRFSEEITGSMVVKVTQLGTYSYVIGNSVSVSGSEVIITLNTIPDRNAYLRIEIIDNKILDLSGNQSSPMSTQVGVVAQY
SIO_010081: SD1D_RS01980
subclass of: SO_0000673
so part of: SD1D_RS01980
location: 404207..406765
location: region:404207-406765:1
so has part: feature:404207-406765:1:exon

WP_058257373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404207-406765:1:exon

SD1D_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01985
old locus tag: SD1D_0399
so part of: sequence
location: complement(407183..408439)
location: region:407183-408439:-1
so has part: feature:407183-408439:-1:exon
subclass of: SO_0000010

position:407183:-1
position: 407183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408439:-1
position: 408439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407183-408439:-1:exon

SD1D_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01985
old locus tag: SD1D_0399
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004627876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: [Fe-Fe] hydrogenase large subunit C-terminal domain-containing protein
translation: MKRFDELYEELLKATIDNREEEYIENLDAFDAHQLDCLLNPKKHSLVWSTKSCECPKDDRHCVKVCPFHAIFPDESGQLQVDEAACAGCSYCIQECRAKRLTASKDAISVLRALRSHKGLSYALIAPAFLGQFKDVTPGKLRTAFKKIGFDGMLEVALFADILTLKEALEFDRNINTKEDFQLTSCCCPVWIAWIKNIYNDLIPHVPPSVSPMIASGRAVKTLYPDALTVFVGPCLAKKAEARDKDIAGAIDYVLTFQEVQDIFNIMEIDPAKMEESEKDHSSRAGRIYAHTGGVSEAVKLTLERINPNREITLQTQKADGVKACRDLIKDILAGKTTANFYEGMGCEGGCVGGPKALIPHKEGRKNVEEYGKAAAYPTPIDNPYVIELLKQLGFETIDSLLDESDIFTRNFLSNTKK
SIO_010081: SD1D_RS01985
subclass of: SO_0000673
so part of: SD1D_RS01985
location: complement(407183..408439)
location: region:407183-408439:-1
so has part: feature:407183-408439:-1:exon

WP_058257374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407183-408439:-1:exon

SD1D_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01990
old locus tag: SD1D_0400
so part of: sequence
location: 408611..409123
location: region:408611-409123:1
so has part: feature:408611-409123:1:exon
subclass of: SO_0000010

position:408611:1
position: 408611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409123:1
position: 409123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408611-409123:1:exon

SD1D_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01990
old locus tag: SD1D_0400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015553542.1
GO component: GO:0005576 - extracellular region [Evidence IEA]
GO process: GO:0071555 - cell wall organization [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VanZ family protein
translation: MKKINKKWIKLAAWLAFYIYILMLSYFLFFSERYGRYMVTKKYNLQLFKEIKRFIKYREYIGFEGFVVNIVGNVLAFSPYGFFLPLLNNKYRKFYIITILSIFFSLAVETSQLLLEVGVFDVDDILMNSIGGIVGYIIFVIAYSLYKKNDKIKEEETSNMQEDGEERETV
SIO_010081: SD1D_RS01990
subclass of: SO_0000673
so part of: SD1D_RS01990
location: 408611..409123
location: region:408611-409123:1
so has part: feature:408611-409123:1:exon

WP_242955240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408611-409123:1:exon

SD1D_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS01995
old locus tag: SD1D_0401
so part of: sequence
location: 409120..409455
location: region:409120-409455:1
so has part: feature:409120-409455:1:exon
subclass of: SO_0000010

position:409120:1
position: 409120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409455:1
position: 409455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409120-409455:1:exon

SD1D_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS01995
old locus tag: SD1D_0401
inference: COORDINATES: protein motif:HMM:NF039667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6142 family protein
translation: MNLGFFKRRDTIQFSGRRHTQLGILSAVIGLAVVAGFIAVSIISGINKGQAGIIIGVVGLLLFALSITGFVFSYRAIKQRDIYYRFPMIGLISNGIMMIVLMILYIIGIVV
SIO_010081: SD1D_RS01995
subclass of: SO_0000673
so part of: SD1D_RS01995
location: 409120..409455
location: region:409120-409455:1
so has part: feature:409120-409455:1:exon

WP_058257375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409120-409455:1:exon

SD1D_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02000
old locus tag: SD1D_0402
so part of: sequence
location: 409503..411581
location: region:409503-411581:1
so has part: feature:409503-411581:1:exon
subclass of: SO_0000010

position:409503:1
position: 409503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411581:1
position: 411581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409503-411581:1:exon

SD1D_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02000
old locus tag: SD1D_0402
EC number: 3.4.11.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201471.1
GO function: GO:0004177 - aminopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminopeptidase
translation: MDIMNLSKEEMKSVLERYELAMERIREIEREEEVRMPLRDYFQKVSAFLILLDDVAQKVRDGSYLKLSLKELQAVNRSLYNDIIEDNYLESYANPTYACKKLGKRYGKLLSFLYTELRALIVFAFEKQLYLHTIYLELFIQVYGLIRWEDEFSFKDIKRAIHDFMYDYCDVIIDYRTKETSDPAYSFAKDIIMEADLSDLRYLYRFGDYISENELKTAEFINSLPEEQIKSMADTFTSGFERGFLVAGLDLSIKNNVNIRYQIGFERVVRQAVKNFMQLGLEPIIFRAAYLALNKKQHLKIGYHASSPNKQYEYDHRFDIGIFLDKGLKNRMIESRKASLEKIKHITQNYAGPALIEVFGEELFAPEDKAEAIKLNKLQQKLMTQYYNDEKLLSKEYLKLEEISFTIISYPIPEIGEDFEDIFADTIKVNTLDNDTYTKIQQSIIDTLDKGEYVRILGKGKNRTNMMVKLQPLKDGDKETNFENCVADVNIPVGEVFTSPQLSGTHGILHVPLVYLNDLAYYDLELVFEDGRIVDYSCKNYDDLDKNKSFIKENLLYNHETLPLGEFAIGTNTTAYMMGKKYDIAPKLPILIAEKTGPHFAVGDTCYSMREDLKVYNPDGKEIIARDNEYSLLRKTNPSKAYFNCHTDITLPYDEIMEISAVLSDGSTIPIIKDSRFVLEGTKLLNEAFDMK
SIO_010081: SD1D_RS02000
subclass of: SO_0000673
so part of: SD1D_RS02000
location: 409503..411581
location: region:409503-411581:1
so has part: feature:409503-411581:1:exon

WP_242955241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409503-411581:1:exon

SD1D_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02005
old locus tag: SD1D_0403
so part of: sequence
location: 411592..412305
location: region:411592-412305:1
so has part: feature:411592-412305:1:exon
subclass of: SO_0000010

position:411592:1
position: 411592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412305:1
position: 412305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411592-412305:1:exon

SD1D_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02005
old locus tag: SD1D_0403
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009253965.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MLRIVDFSKTYKGGKKAVDGLNLEINSGDIFGFIGHNGAGKTTTIRAMAGVLDFDEGDILIDGISIKKDPVKCKKVTAYIPDNPNLYEHLTGIAYLNFIGDIYEVASSDREKAIEKYAQALELTANLGDSIASYSHGMKQKLAIISALIHKPKLLILDEPFVGLDPKASHTLKNIMVDLCKEGSAIFFSTHVLEVAEKLCNKIGIIKGGKLAAFGPTQQVIGDSSLENVFMDLIETN
SIO_010081: SD1D_RS02005
subclass of: SO_0000673
so part of: SD1D_RS02005
location: 411592..412305
location: region:411592-412305:1
so has part: feature:411592-412305:1:exon

WP_058257376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411592-412305:1:exon

SD1D_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02010
old locus tag: SD1D_0404
so part of: sequence
location: 412330..413901
location: region:412330-413901:1
so has part: feature:412330-413901:1:exon
subclass of: SO_0000010

position:412330:1
position: 412330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413901:1
position: 413901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412330-413901:1:exon

SD1D_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02010
old locus tag: SD1D_0404
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQVWRLVSVQLWAMLGSMFAIGEMRKKKTRVLYVGFTFFALIMSMVSFFYGYSMGLSLKQFNSIEIMPSLFMALTSMAVLFTTIYKVKGTLFGFEDYDMVMSLPISTGKIVASRIILLYSINLVFVLIVIIPMMVAYGILVRPSVGFYIFNVLTVFFIPLIPIIIATFFGTVITYISMGFRYSNIIYMVFTFIFLIGIMISPYILADSQQVLVELGKYLSKQINTIYPLAGLYFEAVINLDFWSLLIFIAISVIAFILFSLLVGKVFVKINTTIMTGRYKGNYKLGKLKSNKPLTALYRKELKRYFSSPVYVMNTGFGIAIMFIGAIALPFVNLNDLAAEMQMMGDLHDFVPIFITFCIATSCTTMASISMEGKNIWIVKSIPVSVITVFASKILVNLTILSPVIPATILIIITLKIPFIKGLLILLTAVSFSVFISMYGLMINLNFPNLQWSSETVVVKQSTASMISVFSGLGLLALQYFLWIYTGNYMVAALVFICILWLLNLVIYKILTGKGRKQFESL
SIO_010081: SD1D_RS02010
subclass of: SO_0000673
so part of: SD1D_RS02010
location: 412330..413901
location: region:412330-413901:1
so has part: feature:412330-413901:1:exon

WP_058257377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412330-413901:1:exon

SD1D_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: purM
locus tag: SD1D_RS02015
old locus tag: SD1D_0405
so part of: sequence
location: 414052..415077
location: region:414052-415077:1
so has part: feature:414052-415077:1:exon
subclass of: SO_0000010

position:414052:1
position: 414052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415077:1
position: 415077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414052-415077:1:exon

SD1D_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: purM
locus tag: SD1D_RS02015
old locus tag: SD1D_0405
EC number: 6.3.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008977357.1
GO function: GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylformylglycinamidine cyclo-ligase
translation: MDYKQAGVDIEAGYKAVDLMKEHIKKTMRKEVLSDIGGFSGAFSLKRFMNMEEPTLVSGTDGVGTKLKIAFLLDKHDTVGIDCVAMCVNDIACSGAEPLFFLDYIACGKNEPERIASIVKGVAEGCQQAGAALIGGETAEMPGFYPEDEYDLAGFAVGIADKKNMITGKDIKAGDVLVGIASSGIHSNGYSLVRNVFSMRLDVLETYYESLGMSLGEVLLTPTKIYVKALQELKEGNVYIKGCSHITGGGFFENIPRMLPQGMTGLVKKDSYDIPPIFNMLKKDGDISDEVMYNTFNMGIGMILALDPAQADLAVNIINKAGEKAYIIGEVGQGTEGVKLC
SIO_010081: SD1D_RS02015
subclass of: SO_0000673
so part of: SD1D_RS02015
location: 414052..415077
location: region:414052-415077:1
so has part: feature:414052-415077:1:exon

WP_058257378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414052-415077:1:exon

SD1D_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: purN
locus tag: SD1D_RS02020
old locus tag: SD1D_0406
so part of: sequence
location: 415071..415697
location: region:415071-415697:1
so has part: feature:415071-415697:1:exon
subclass of: SO_0000010

position:415071:1
position: 415071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415697:1
position: 415697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415071-415697:1:exon

SD1D_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: purN
locus tag: SD1D_RS02020
old locus tag: SD1D_0406
EC number: 2.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008392453.1
GO function: GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylglycinamide formyltransferase
translation: MLRLAVLVSGGGTNLQALIDQIEAGNLPGVTISVVISNNREAYALKRAEAHNIPQAIISKKDFDNQQSFEEAFYNLLTGYEVDLIVLAGFLLILPEKIVKHYQNKIINVHPSLIPSFSGKGYYGLKVHEAALARGVKVTGATVHFVDEGTDTGPIILQKAVNVEKNDTAETLQKRVMEEAEWVILPEAVRLIAQGRIRIRDNKVVEVI
SIO_010081: SD1D_RS02020
subclass of: SO_0000673
so part of: SD1D_RS02020
location: 415071..415697
location: region:415071-415697:1
so has part: feature:415071-415697:1:exon

WP_058257379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415071-415697:1:exon

SD1D_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: purD
locus tag: SD1D_RS02025
old locus tag: SD1D_0407
so part of: sequence
location: 415697..416962
location: region:415697-416962:1
so has part: feature:415697-416962:1:exon
subclass of: SO_0000010

position:416962:1
position: 416962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415697-416962:1:exon

SD1D_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: purD
locus tag: SD1D_RS02025
old locus tag: SD1D_0407
EC number: 6.3.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201466.1
GO function: GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylamine--glycine ligase
translation: MKVLIIGGGGREHAIAWKVSQSPKVDKLYCAPGNAGIAQCAECVDIPVIEYEALADFALSNKIDLTIVGPDDPLADGIVDVFEKKGLRIFGPRKNAAIIESSKVFSKNLMKKYNIPTAAYETFDQADKAIEYLKTRDFPIVVKADGLALGKGVIICNDFDQAVSAVKAIMEDKQFGLAGSQVVIEEFITGPEVSVLAFCDGTHIIPMASAQDHKRAFDNDQGPNTGGMGTFSPSPFYTEQIHEYCQKYIYQPTMAAMKAEGRDFVGILFVGLMLTKDGPKVLEYNARFGDPEAQVVLPRLKNDLIDVIEACIEGRLDKVNLSFEDNAAVCVILASDGYPLSYEKGFEIEGLDNFTDKEDYYVFHAASKKENDKILTNGGRVLGVTAIGKTLKEARSKAYEAADNIHFKNKYMRKDIGKAIQ
SIO_010081: SD1D_RS02025
subclass of: SO_0000673
so part of: SD1D_RS02025
location: 415697..416962
location: region:415697-416962:1
so has part: feature:415697-416962:1:exon

WP_058257380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415697-416962:1:exon

SD1D_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02030
old locus tag: SD1D_0408
so part of: sequence
location: 417179..419917
location: region:417179-419917:1
so has part: feature:417179-419917:1:exon
subclass of: SO_0000010

position:417179:1
position: 417179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419917:1
position: 419917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417179-419917:1:exon

SD1D_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02030
old locus tag: SD1D_0408
inference: COORDINATES: protein motif:HMM:NF024144.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SH3 domain-containing protein
translation: MKRRFFHKCIVILLCIGLLVPNQVASTIVAATRKGTVTASTLNVRAKPSTSAKKVQLNDGTYVYLRRNETVTILEEAGDWYYVSLKFNGKNIKGYVHGDYIKAEKSKSTKKTPTPTPTPTPKPTPTPKPKNSSTSQGYKHQASVTASSLNVRSGAGTNYSRIGSLKKNNKVTVIGEAENSNTKWYQINMANNKTGYVSSLYIKLDLKKSIKGKVIASKIKVRKSANSKSAYVKNSSGNIISLKKDKAVNIIDEAVVSGEKWYKISFTVSKVKYSGYVPAYQIGFRGEETKNTSAPTPTPTPKPKATPTPKPTPTPTPKPKATPTPKPKATPTPKPTATPTPKPKATPTPKPKATPTPVPTPADAKVLEIKDNPIYSYIYGPIDGFVCNILYLNVYENRAVNDNFLYDSSGKPVLLKSGDKIQINEAIRVNGETWYNVSYNNIRGHVRAEYIYVGSKLPANVDWKQPEAPEVPKATPTPVPDNTDDLDFEEMLIREGFPESYKEGLRQLHAKHPNWVFLAYHTGLDWNTVIKEESVPGKNTIPNSRSVEWLSFDKGAYDWKTDKFVVYDGTYWVTASKAAIEYYMDPRNFLDEERIFQFELLRYQSRYQNAKGVENILKGTALYNKSYTFIDDDGKSKTLTYGETFIKAAEYSGVSPYHLASRVKQEVVTGPNTLSNSVSGTYKGYEGYYNFYNIGANDSPGGGAIANGLNYAKNGSKNKANNEKYLIPWTSPYRSIVGGSYFLGSTYINRGQDTVYLQKFNVTPVSTYFHQYMTNVEAPWAEAKKIAAAYKNMEDTPIVFSIPVYLNMPSKPCPRPTKQYNPNNRLKSLKVLDVKGKELKISPTFDQTEYNYYLIVGNNIETVDIKASSVSTKAKVIGGGTIPLSVGNNEIVIRVVAENGDIANYTINIVRE
SIO_010081: SD1D_RS02030
subclass of: SO_0000673
so part of: SD1D_RS02030
location: 417179..419917
location: region:417179-419917:1
so has part: feature:417179-419917:1:exon

WP_058257381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417179-419917:1:exon

SD1D_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02035
old locus tag: SD1D_0409
so part of: sequence
location: 420100..421320
location: region:420100-421320:1
so has part: feature:420100-421320:1:exon
subclass of: SO_0000010

position:420100:1
position: 420100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421320:1
position: 421320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420100-421320:1:exon

SD1D_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02035
old locus tag: SD1D_0409
inference: COORDINATES: protein motif:HMM:NF024144.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cadherin-like beta sandwich domain-containing protein
translation: MKRRLFKAIAFCLLFVMGGLLNISSIKAASANIEITADNNQITVGDSVYVYITIDSDTIFSDIEANLVYDENILEYKSGASFIKGSSGFLKIADVNISEADDNRKYALEFKAIKVGKCEIEFSGQIMVYDYETGMPMSVSSNILELEVKAAHTASDNASLASLKISPSQLNPAFDKNIYEYNTNVAYDVEKLVVVALPEDEKATIRISGNETLKEGENKVITTVVAESGKKVEYVINVTKESAPEDELDIDPITPDNRHGSFELIQEDNEIFAIYNGKYKLLEPASDVKIPEGYTKTNMILSGISISVYEPNLPGSDFVLIYAENELGEANFYRYDKVEKTLQRFVEDIDSVTDPSDNIDNEDQSSSKKYRSKLNKAAIVISILCALCAGLVIVVVRLYIKNRKQK
SIO_010081: SD1D_RS02035
subclass of: SO_0000673
so part of: SD1D_RS02035
location: 420100..421320
location: region:420100-421320:1
so has part: feature:420100-421320:1:exon

WP_058257382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420100-421320:1:exon

SD1D_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02040
old locus tag: SD1D_0410
so part of: sequence
location: 421445..421819
location: region:421445-421819:1
so has part: feature:421445-421819:1:exon
subclass of: SO_0000010

position:421445:1
position: 421445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421819:1
position: 421819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421445-421819:1:exon

SD1D_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02040
old locus tag: SD1D_0410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002583791.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MYVKIDFNSDEALYIQLRNQIIYGIASSQFQEGDNLPSVRELAEYIGINMHTVNKAYSILKQEGYIKLDRRKGAVVAIDVNKMQAIEDLKEELRVILAKAICKNLSRNDVIEVINEIYNEFERG
SIO_010081: SD1D_RS02040
subclass of: SO_0000673
so part of: SD1D_RS02040
location: 421445..421819
location: region:421445-421819:1
so has part: feature:421445-421819:1:exon

WP_058257383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421445-421819:1:exon

SD1D_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02045
old locus tag: SD1D_0411
so part of: sequence
location: 421825..422370
location: region:421825-422370:1
so has part: feature:421825-422370:1:exon
subclass of: SO_0000010

position:421825:1
position: 421825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422370:1
position: 422370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421825-422370:1:exon

SD1D_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02045
old locus tag: SD1D_0411
inference: COORDINATES: protein motif:HMM:NF014232.2
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrB/UvrC motif-containing protein
translation: MLCDRCLKRNAKVLYTEIINGVKTEQHLCEECAADYTSFQMEKPLLNSDITLNSLLSTLLGGYHTSATKKPGESKPSLVCEGCKSTYEEFLQRGRFGCAQCYRSFHGELGETLRRIQGAEVHTGKRPKGFVSSTDKILQDLTEVERLSIELQEAIEKEEFEEAARLRDLIRQLKKEEANNA
SIO_010081: SD1D_RS02045
subclass of: SO_0000673
so part of: SD1D_RS02045
location: 421825..422370
location: region:421825-422370:1
so has part: feature:421825-422370:1:exon

WP_058257384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421825-422370:1:exon

SD1D_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02050
old locus tag: SD1D_0412
so part of: sequence
location: 422363..423397
location: region:422363-423397:1
so has part: feature:422363-423397:1:exon
subclass of: SO_0000010

position:422363:1
position: 422363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423397:1
position: 423397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422363-423397:1:exon

SD1D_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02050
old locus tag: SD1D_0412
EC number: 2.7.14.1
inference: COORDINATES: protein motif:HMM:NF002194.0
GO function: GO:0016301 - kinase activity [Evidence IEA]
GO process: GO:0046314 - phosphocreatine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein arginine kinase
translation: MLKWYEEIVPDGDVVISSRVRLARNLEDFKFSPLLVEAEAVKLVDRVKSITTSLAEQDKRKYYSCNIQTLSDIDKAAMVERHIVSPLLAEKEQTTGLILSEDETVSIMINEEDHVRIQAIVAGMNLEGAYEIANRIDDIAYEQLKFAYDEKYGYMTSCPTNSGTGMRASCMVFLPALSAARMIQKLFEEVGRYGVTIRGIYGEGTKSLGSIYQISNQKTLGNSELEIIDNLKRIVDQVVKQERKRREYMLSLNSDEIEDQVYRAYGVLKYARNISSDDAMTLLSQLKFGLDCGLIKFDKEFNIHKMMMGVQPGSLQWTIGKNVGSIARDRARAEYIRKELPTII
SIO_010081: SD1D_RS02050
subclass of: SO_0000673
so part of: SD1D_RS02050
location: 422363..423397
location: region:422363-423397:1
so has part: feature:422363-423397:1:exon

WP_058257385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422363-423397:1:exon

SD1D_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02055
old locus tag: SD1D_0413
so part of: sequence
location: 423611..426055
location: region:423611-426055:1
so has part: feature:423611-426055:1:exon
subclass of: SO_0000010

position:423611:1
position: 423611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426055:1
position: 426055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423611-426055:1:exon

SD1D_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02055
old locus tag: SD1D_0413
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201460.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit
translation: MNDKFTQNAIQAINSARETALRLNHNYIGTEHILMGLMQVDGVASRVLRENGVTVEKVMELVNQLIAPSSGVEMMEGGDFTPRSKRILDQSQREAARFKAQQAGTEHILIALLREQDCIAVRLLNTLGVNLQKVYIDLLQAAGVDISTAKNDYSASKNKGKAKSSTPTLDQYSRDLTQYARDGKLDPVIGRETEIQRVVQILSRRTKNNPCLVGEPGVGKTAIAEGLALKIVEGNIPETIKDKRVVTLDLSGMVAGSKYRGEFEERIKKVINEVINDGNVLLFIDELHTIIGAGGAEGAIDASNILKPSLARGELQIIGATTREEYRKYIEKDSALERRFQPVVVEEPSEEEAIQIMFGLRDKYEAHHKVRITDDALTAAVKLSSRYINDRYLPDKAIDLMDEAASKVRLSAYTTSPTVKELEKEIIRLEEEKEKAIKEEAYEKAGDIKKQQQALQEELEKQKLVEEKQRAEYQLVVSEAEIADIVSSWTKIPVKKLEEEETQRLQNLENILHERVIGQDEAVTAVSKAIRRGRVGLKDPNRPIGSFLFLGPTGVGKTELSKALAEAMFGTENAIIRVDMSEYMEKHSVSKLIGSPPGYVGYDEGGQLSEKVRQNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRRVSFKNTIIIMTSNAGAQNIISPKRLGFTSVVDKDEDYRRMKDAVMDEVKRIFRPEFINRIDEIIVFHSLTKDHIKEIVGIMVNNIAKRSKAQMNISLEASKEALEYLAETGYDEKFGARPLRRAIQTNVEDKLAEAILAGNVKEGDQVKIDYLDNEIVLNTI
SIO_010081: SD1D_RS02055
subclass of: SO_0000673
so part of: SD1D_RS02055
location: 423611..426055
location: region:423611-426055:1
so has part: feature:423611-426055:1:exon

WP_058257386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423611-426055:1:exon

SD1D_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02060
old locus tag: SD1D_0414
so part of: sequence
location: 426146..426559
location: region:426146-426559:1
so has part: feature:426146-426559:1:exon
subclass of: SO_0000010

position:426146:1
position: 426146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426559:1
position: 426559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426146-426559:1:exon

SD1D_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02060
old locus tag: SD1D_0414
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005949842.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVIQELIRKENNGTLSFGNYELDVKSKLTDFEHEGDLYKVKTYNKITKLERNGMFVYESVPGTSVFNMEQKDNELCFEVTGKEPAQITLELEAEKEYEIFKNDSFLGKMKTNLGGKLIFSLELEEDKCDFIKVVKL
SIO_010081: SD1D_RS02060
subclass of: SO_0000673
so part of: SD1D_RS02060
location: 426146..426559
location: region:426146-426559:1
so has part: feature:426146-426559:1:exon

WP_058257387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426146-426559:1:exon

SD1D_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: radA
locus tag: SD1D_RS02065
old locus tag: SD1D_0415
so part of: sequence
location: 426561..427928
location: region:426561-427928:1
so has part: feature:426561-427928:1:exon
subclass of: SO_0000010

position:426561:1
position: 426561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427928:1
position: 427928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426561-427928:1:exon

SD1D_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: radA
locus tag: SD1D_RS02065
old locus tag: SD1D_0415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201458.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadA
translation: MAKAKTVFFCKECGYESSKWLGQCPGCRQWDTFVEEPVIRKGVSATYSHKELKDPVLLSGVKAEAETRISSNIGELDRVLGGGIVPASLVLVGGDPGIGKSTLLLQMCRELVGQGKKVLYISGEESKGQIKMRADRLGAFSGELLLLCETNLDLIEAVVHKHKPDIIVIDSIQTMFKEDITSAPGSVGQVREATGALMRLAKGTGTTIFIIGHVTKEGMVAGPRVLEHMVDTVLYFEGDNYASYRVLRAVKNRFGSTNEIGVFEMQNSGLAEVKNPSEYMLNGRPEGEPGSVVSSAIEGTRPILVEVQALISRTNFNMPRRTAAGTDYNRVNLLMAVLEKRLGIQMGDCDAYVNVAGGMRITEPALDLAIITAIISSYRNIAINPNTIVFGEVGLTGEIRAVNMADYRVAEAAKMGFELCILPKANVGNIKVASKIKLVGVRNIQEVMDYIKENR
SIO_010081: SD1D_RS02065
subclass of: SO_0000673
so part of: SD1D_RS02065
location: 426561..427928
location: region:426561-427928:1
so has part: feature:426561-427928:1:exon

WP_058257388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426561-427928:1:exon

SD1D_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02070
old locus tag: SD1D_0416
so part of: sequence
location: 428094..428166
location: region:428094-428166:1
so has part: feature:428094-428166:1:exon
subclass of: SO_0000663

position:428094:1
position: 428094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428166:1
position: 428166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428094-428166:1:exon

SD1D_RS02070
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1679721
locus tag: SD1D_RS02070
old locus tag: SD1D_0416
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:428127..428129,aa:Trp,seq:cca)
SIO_010081: SD1D_RS02070
subclass of: SO_0000673
so part of: SD1D_RS02070
location: 428094..428166
location: region:428094-428166:1
so has part: feature:428094-428166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428094-428166:1:exon

SD1D_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02075
old locus tag: SD1D_0417
so part of: sequence
location: 428447..428914
location: region:428447-428914:1
so has part: feature:428447-428914:1:exon
subclass of: SO_0000010

position:428447:1
position: 428447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428914:1
position: 428914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428447-428914:1:exon

SD1D_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02075
old locus tag: SD1D_0417
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009524837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4065 domain-containing protein
translation: MEKKTVFEVANFFLSKESMSPKKLQKLVYYAYAWTLAILNEDEINIDYTLFDEPLQAWVHGPVCPDLYYRYKCYGWGEIPQCTFIHKHLFSVEELDIMEQVWEVYGKFTGNELESITHQEEPWINAREGFQPYEPCQVNLDNKIIFRYYNKQSAD
SIO_010081: SD1D_RS02075
subclass of: SO_0000673
so part of: SD1D_RS02075
location: 428447..428914
location: region:428447-428914:1
so has part: feature:428447-428914:1:exon

WP_058259161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428447-428914:1:exon

SD1D_RS12095
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12095
old locus tag: SD1D_0418
so part of: sequence
location: 428918..429085
location: region:428918-429085:1
so has part: feature:428918-429085:1:exon
subclass of: SO_0000010

position:428918:1
position: 428918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429085:1
position: 429085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428918-429085:1:exon

SD1D_RS12095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12095
old locus tag: SD1D_0418
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGVEEANSLFYEFCPINIEGFCERMNYLNTCFVFDYLDIDKYRETFDFTYSPFKK
SIO_010081: SD1D_RS12095
subclass of: SO_0000673
so part of: SD1D_RS12095
location: 428918..429085
location: region:428918-429085:1
so has part: feature:428918-429085:1:exon

WP_157893082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428918-429085:1:exon

SD1D_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02080
old locus tag: SD1D_0419
so part of: sequence
location: complement(429119..429451)
location: region:429119-429451:-1
so has part: feature:429119-429451:-1:exon
subclass of: SO_0000010

position:429119:-1
position: 429119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429451:-1
position: 429451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429119-429451:-1:exon

SD1D_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02080
old locus tag: SD1D_0419
inference: COORDINATES: protein motif:HMM:NF025384.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4234 domain-containing protein
translation: MIQRRSLLKLILLSFVTLGIYQIVFWYKYADDVNRICEGDGEETKNYIIVILLSLVTCGIYNFIWYYGVGNRLSQNAPRYGTTFKENGTTVLLWMLLGSISCGIGYDLYF
SIO_010081: SD1D_RS02080
subclass of: SO_0000673
so part of: SD1D_RS02080
location: complement(429119..429451)
location: region:429119-429451:-1
so has part: feature:429119-429451:-1:exon

WP_058257389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429119-429451:-1:exon

SD1D_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02085
old locus tag: SD1D_0420
so part of: sequence
location: complement(429463..429888)
location: region:429463-429888:-1
so has part: feature:429463-429888:-1:exon
subclass of: SO_0000010

position:429463:-1
position: 429463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429888:-1
position: 429888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429463-429888:-1:exon

SD1D_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02085
old locus tag: SD1D_0420
inference: COORDINATES: protein motif:HMM:NF022281.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2752 domain-containing protein
translation: MNSISHKKDKFNKGWQYRLKIAIIIGILYGFLNLFGVGCPIKFLTGISCPGCGMTRAVMAALNLQFSKAFYYHPLFGLVPFMFALYLFEDKIKPIYTKYTWILIISLFLTIYVIRLFIIANNIVFINISSGFVLKFIRFIF
SIO_010081: SD1D_RS02085
subclass of: SO_0000673
so part of: SD1D_RS02085
location: complement(429463..429888)
location: region:429463-429888:-1
so has part: feature:429463-429888:-1:exon

WP_058257390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429463-429888:-1:exon

SD1D_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02090
old locus tag: SD1D_0421
so part of: sequence
location: complement(430014..430586)
location: region:430014-430586:-1
so has part: feature:430014-430586:-1:exon
subclass of: SO_0000010

position:430014:-1
position: 430014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430586:-1
position: 430586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430014-430586:-1:exon

SD1D_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02090
old locus tag: SD1D_0421
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012200294.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNSNGDKVKTMTVSALLCALGILIPMTFPSLKPEPASFTLASHVPLIIAMFISPTVTAFVAVVTTLGFLINFPLVVALRALSHLIFSLIGAFILKKNNNLLLSYKNTAIFAFTLSLIHGICEVAVVSYFYWVVGMTDIFYEKGYLYTVVLLVGLGTVIHSLVDFSIAIFVWKPLQYIISIPANAKIKIK
SIO_010081: SD1D_RS02090
subclass of: SO_0000673
so part of: SD1D_RS02090
location: complement(430014..430586)
location: region:430014-430586:-1
so has part: feature:430014-430586:-1:exon

WP_058257391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430014-430586:-1:exon

SD1D_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02095
old locus tag: SD1D_0422
so part of: sequence
location: complement(430680..431966)
location: region:430680-431966:-1
so has part: feature:430680-431966:-1:exon
subclass of: SO_0000010

position:430680:-1
position: 430680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431966:-1
position: 431966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430680-431966:-1:exon

SD1D_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02095
old locus tag: SD1D_0422
EC number: 1.4.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015358680.1
GO function: GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Glu/Leu/Phe/Val dehydrogenase
translation: MGHNSYNPYESAQKQFNHVADQIGLDEATRELLKQPSREYHFTIPVKMDDGTTKVFNGYRIQHNDARGPAKGGIRFHPNETVDTIRALSMWMTWKCAVVDIPLGGGKGGIICDPRTLSKGEQERLCRGYVRQLYKNLGPNLDVPAPDVMSNAQHMLWMLDEYETLMGGHYPGTITGKPVGMGGSLGRTEATGYGVIYTLREALKALKIDIASTTASLQGFGNVAEYAAKLYTAMGGKIIAISCWDNNDKKAYTYRNPEGINIEQMAQIKDSFGTIDKQKAIDFGCELLEGEAWISQDVDILLPCALENQITPETFAKISKEVKVICEGANGPTTPDCDELIKERGIYLIPDFLCNAGGVTCSYFEQVQCNMNYFWPKEEVLDKLDQKMTAAFHAVHNLAQEKGLYMRDAAYVIAINRVAEAVKLRGWI
SIO_010081: SD1D_RS02095
subclass of: SO_0000673
so part of: SD1D_RS02095
location: complement(430680..431966)
location: region:430680-431966:-1
so has part: feature:430680-431966:-1:exon

WP_058257392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430680-431966:-1:exon

SD1D_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02100
old locus tag: SD1D_0423
so part of: sequence
location: 432317..433144
location: region:432317-433144:1
so has part: feature:432317-433144:1:exon
subclass of: SO_0000010

position:432317:1
position: 432317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433144:1
position: 433144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432317-433144:1:exon

SD1D_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02100
old locus tag: SD1D_0423
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009220957.1
GO function: GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA glycosylase
translation: MKIKNKNFDIKQIAESGQCFRMNPIGPNRYSLVAFDRYIELEQLEDDLIEITCSENDYNKIWKDYFDLDYDYGYIVDNLIKGPDEFLNKAAEYGRGIRILRQDPFEMLISFIISQNKNIPSIKTCIERISQVYGKRCIDGTTGSIYYTFPSAKVLAEAKKEDLRALKLGYRDEYIIGAAKAVISGELNLEDLKVCSHEEAVKSLKTVKGIGDKVANCISLFGLHHIEAFPVDVWMKRVLSEIYDNKFDPNSYQGYAGIVQQYMFYYIRHVYGVSN
SIO_010081: SD1D_RS02100
subclass of: SO_0000673
so part of: SD1D_RS02100
location: 432317..433144
location: region:432317-433144:1
so has part: feature:432317-433144:1:exon

WP_058257393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432317-433144:1:exon

SD1D_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02105
old locus tag: SD1D_0424
so part of: sequence
location: 433272..433646
location: region:433272-433646:1
so has part: feature:433272-433646:1:exon
subclass of: SO_0000010

position:433272:1
position: 433272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433646:1
position: 433646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433272-433646:1:exon

SD1D_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02105
old locus tag: SD1D_0424
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDQGRSQDNKGLENERRINHLVNLVERSTRTERHLEEHSDISSSENIEHAKQVQRERKDQIENLKNIIAYGDNNSKEKHMKNTEKRFLYAEGYLNNNAHRMDNETFKNAKEKQEHRKEQLDSYR
SIO_010081: SD1D_RS02105
subclass of: SO_0000673
so part of: SD1D_RS02105
location: 433272..433646
location: region:433272-433646:1
so has part: feature:433272-433646:1:exon

WP_058257394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433272-433646:1:exon

SD1D_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02110
old locus tag: SD1D_0425
so part of: sequence
location: complement(433675..434148)
location: region:433675-434148:-1
so has part: feature:433675-434148:-1:exon
subclass of: SO_0000010

position:433675:-1
position: 433675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434148:-1
position: 434148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433675-434148:-1:exon

SD1D_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02110
old locus tag: SD1D_0425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020074461.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA thioesterase
translation: MKAKRVSESVTEQVHIIMPSHISGTDRLFGGQLLAWIDEVSAVTARRHSGRNVTTAAIDNLQFKAGVYINNILVLIGRVTYVGKTSMEVRVDTYVEDHLSGIRKVVNRAYLVMVALDNEEKPTEVPGLILETEAERAEWEAGLRRRELRSKRRKEGY
SIO_010081: SD1D_RS02110
subclass of: SO_0000673
so part of: SD1D_RS02110
location: complement(433675..434148)
location: region:433675-434148:-1
so has part: feature:433675-434148:-1:exon

WP_058257395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433675-434148:-1:exon

SD1D_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: fba
locus tag: SD1D_RS02115
old locus tag: SD1D_0426
so part of: sequence
location: 434343..435284
location: region:434343-435284:1
so has part: feature:434343-435284:1:exon
subclass of: SO_0000010

position:434343:1
position: 434343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435284:1
position: 435284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434343-435284:1:exon

SD1D_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: fba
locus tag: SD1D_RS02115
old locus tag: SD1D_0426
EC number: 4.1.2.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015358657.1
GO function: GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class II fructose-1,6-bisphosphate aldolase
translation: MALVTTKEMFQKAYEGGYAIGAFNVNNMEIIQGITEAAKEENAPVILQVSAGARKYAKHNYLVKLVEAAVLETDLPIALHLDHGEDFEICKACIDGGFTSVMIDGSKHSFEDNIALTKKVVDYAHERGVVVEGELGQLAGIEDDVNVSEEDASFTKPEEVEEFVARTGVDSLAIAIGTSHGAFKFKPGQKPELRFDILEEIQRRLPNFPIVLHGASSVSQEYVNIIAQNGGKLDDAIGIPEDMLRKAASMAVCKINIDSDLRLAFTAGVREHLMNNPAHFDPRQYLTQGREYIKALVKHKIVNVLGCSGAASK
SIO_010081: SD1D_RS02115
subclass of: SO_0000673
so part of: SD1D_RS02115
location: 434343..435284
location: region:434343-435284:1
so has part: feature:434343-435284:1:exon

WP_058257396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434343-435284:1:exon

SD1D_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: tgt
locus tag: SD1D_RS02120
old locus tag: SD1D_0427
so part of: sequence
location: 435469..436602
location: region:435469-436602:1
so has part: feature:435469-436602:1:exon
subclass of: SO_0000010

position:435469:1
position: 435469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436602:1
position: 436602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435469-436602:1:exon

SD1D_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: tgt
locus tag: SD1D_RS02120
old locus tag: SD1D_0427
EC number: 2.4.2.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015514696.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA guanosine(34) transglycosylase Tgt
translation: MYRLIEQDGRAKSAEFKTVHGTIQTPVFMNVGTLAAIKGAVSTIDLNNIGTQVQLSNTYHLHLRPGDQIVKKMGGLHKFMVWDKPILTDSGGFQVFSLAKLRKIQEEGVYFSSHIDGRKIFMGPEESMQIQSNLASTIAMAFDECPPHPAERSYMIDSVERTTRWLIRCIKEMDRLNSLEDTINKKQMLFGINQGGTYADIRIEHAKRISELNLAGYAIGGLAVGESHEEMYYILEETVPYLPLNKPVYLMGVGTPANILEAVDRGVDFFDCVYPSRNGRHGHAYTGFGKLNLMNAKYQLDDRPIEEGCACPACQHYSRAYIRHLLKAKEMLGMRLLVLHNLYFYNHMMEEIREAIRNKRYKEYKKQKLENFMGGED
SIO_010081: SD1D_RS02120
subclass of: SO_0000673
so part of: SD1D_RS02120
location: 435469..436602
location: region:435469-436602:1
so has part: feature:435469-436602:1:exon

WP_058257397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435469-436602:1:exon

SD1D_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: yajC
locus tag: SD1D_RS02125
old locus tag: SD1D_0428
so part of: sequence
location: 436683..437015
location: region:436683-437015:1
so has part: feature:436683-437015:1:exon
subclass of: SO_0000010

position:436683:1
position: 436683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437015:1
position: 437015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436683-437015:1:exon

SD1D_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: yajC
locus tag: SD1D_RS02125
old locus tag: SD1D_0428
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016294437.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit YajC
translation: MNNLIFLAQNAATDPNGTGSLVLPLLWMVVLGLLMYFMLIRPQKKQQKQMQAMLSTLEKGDSVLTSSGFYGVVIDIMDEVVIVEFGNNKNCRIPMKKSAIIELEKPNKEN
SIO_010081: SD1D_RS02125
subclass of: SO_0000673
so part of: SD1D_RS02125
location: 436683..437015
location: region:436683-437015:1
so has part: feature:436683-437015:1:exon

WP_058257398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436683-437015:1:exon

SD1D_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02130
old locus tag: SD1D_0429
so part of: sequence
location: complement(437067..437654)
location: region:437067-437654:-1
so has part: feature:437067-437654:-1:exon
subclass of: SO_0000010

position:437067:-1
position: 437067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437654:-1
position: 437654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437067-437654:-1:exon

SD1D_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02130
old locus tag: SD1D_0429
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014117523.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipicolinate synthase subunit B
translation: MKINEKNIGIAFTGSYCTFDRVFPEVERLVAENANVYTIFSDQSQTTDTRFGKAADFLKKAKEITGKDPITTIVEAEKLGPNNILDIIVIAPCTGNTLAKMANAITDSPVLMAAKGLLRNNKPVVIAISSNDALSNNLKNIGLLINTKNIYFVPFSQDNYKGKPHSMVAHFDLILPTIEFALENKQLQPLILAPA
SIO_010081: SD1D_RS02130
subclass of: SO_0000673
so part of: SD1D_RS02130
location: complement(437067..437654)
location: region:437067-437654:-1
so has part: feature:437067-437654:-1:exon

WP_058257399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437067-437654:-1:exon

SD1D_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: dpsA
locus tag: SD1D_RS02135
old locus tag: SD1D_0430
so part of: sequence
location: complement(437655..438521)
location: region:437655-438521:-1
so has part: feature:437655-438521:-1:exon
subclass of: SO_0000010

position:437655:-1
position: 437655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438521:-1
position: 438521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437655-438521:-1:exon

SD1D_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: dpsA
locus tag: SD1D_RS02135
old locus tag: SD1D_0430
inference: COORDINATES: protein motif:HMM:NF006162.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipicolinate synthase subunit DpsA
translation: MAKKIGIFGGDKRQVYMALSLLNKGYSVYTYRLLDKITHKNHTSASGLDELMKKCQVLIGPIPLTKDIVTIPSSASNSSSSCNIADLLNKDHMLIGGVIPQDLEDLCENKGIFCYDLMRSDKIAIMNAIATAEGTILEAIKNSDRNIHNSNCLILGYGRCGKVLADKLKGLDAKVTIAARREASLAYAQAAGFNTVLLDDIKSVLPKFHFIFNTIPSLVLDQNCLKNVSPDVVIIDIASAPGGVDFEYALNHGINAKLCLGIPGKVSPRTSADILVAEIEALIKERSG
SIO_010081: SD1D_RS02135
subclass of: SO_0000673
so part of: SD1D_RS02135
location: complement(437655..438521)
location: region:437655-438521:-1
so has part: feature:437655-438521:-1:exon

WP_058257400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437655-438521:-1:exon

SD1D_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02140
old locus tag: SD1D_0431
so part of: sequence
location: 438845..439393
location: region:438845-439393:1
so has part: feature:438845-439393:1:exon
subclass of: SO_0000010

position:438845:1
position: 438845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439393:1
position: 439393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438845-439393:1:exon

SD1D_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02140
old locus tag: SD1D_0431
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKHYKDYELVTKELSDGKIKQVAEYRGKFYICMLSSKKLSRVKLYLLALVLCSGATVMGAGFLNTPSSRVAYVALPYVSLFLPIAYSIMGTVGFIKSSNKLKHAEYLETKVRIFRSSIWQIVLSSLTLIGEICFILFKAKQEILKETIFVSLMVLIITLNIISLQLQKRVVYQVEDPDYNG
SIO_010081: SD1D_RS02140
subclass of: SO_0000673
so part of: SD1D_RS02140
location: 438845..439393
location: region:438845-439393:1
so has part: feature:438845-439393:1:exon

WP_058257401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438845-439393:1:exon

SD1D_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02145
old locus tag: SD1D_0432
so part of: sequence
location: 439514..441817
location: region:439514-441817:1
so has part: feature:439514-441817:1:exon
subclass of: SO_0000010

position:439514:1
position: 439514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441817:1
position: 441817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439514-441817:1:exon

SD1D_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02145
old locus tag: SD1D_0432
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198844.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MRKIGKAISLLLVLVMVLSAFAACSKKDKKDNETETPLVVGYLPFSQKFSPFFADTGYDQDVVEFVSVQLLTTDRTGAIVYNAIEGETIPYNGVDYTYTGIADIAVNYDEEADITTYDIKIRDDVKFSDGHVMDADDIIFTYYVLSDPSYDGSSTLYSQPIIGMQNYRANSSAAETITDEEVNALIENPSDSLNQAIIDEIIRPVLESEFDWVGSLYGDERYASYTEAHPEQKDLFASFYSLDENYDSYAVNDEKQVLEDIIAQYGSDYKALGAGYAADETYYVNDVKTIARSIITEEKKAAGIGEDVYNIEGIKKISDTEVQVITKGYDATAIYQIGGAQVAPLHYYGDESQYDYENNKFGFPRGDLSIVKSKTTHPLGAGPYKFVKYENKVVFLEANEHYYKGAPKIKYIQLKETTEADKVTGIEQGTLDITDPTGSKTTFEQIAKINSNGELSGDKIVTSSVDNLGYGYIGMNADTINVGGEPNSEASKNLRKAIATVLSVYRDVAIDTYYGDAASVINYPISNTSWAAPQKSDSDYKVAFSEDVNGNQIYTSDMSSEDKYAAALQAALGYFEAAGYTVTDGKLTAAPAGAKMEYEVLIPGDGDGNHPSFAILTDASAALDTIGFKLNVNDLADANVLWDRLDAGTQEMWCAAWGATIDPDMYQVYHSTNIVGKGGTDSNHYHIADTDLDTLIMEARKSDDQSYRKSAYKQCLDIIMDWAVEIPVYQRQNSVVFSAERVNIETVTPDITTFYEWFKEIENTELK
SIO_010081: SD1D_RS02145
subclass of: SO_0000673
so part of: SD1D_RS02145
location: 439514..441817
location: region:439514-441817:1
so has part: feature:439514-441817:1:exon

WP_058257402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439514-441817:1:exon

SD1D_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02150
old locus tag: SD1D_0433
so part of: sequence
location: 442112..443098
location: region:442112-443098:1
so has part: feature:442112-443098:1:exon
subclass of: SO_0000010

position:442112:1
position: 442112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443098:1
position: 443098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442112-443098:1:exon

SD1D_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02150
old locus tag: SD1D_0433
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015358454.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MRKFILKRLAISVVILFFVALIIYTIMRCMPSSFVENMAREKASLPGGKSYTEWLDQLNASYGLDKNIPAGFVHWVKQAVRLNFGDSWAFNMPVTEKFKEVIMDSFVLGSITFILQIAIAIPLGIIAARKQYSKADYAISVFALIGISLPSFFFATILKYIFSVKLGWFDLFGMIGRMYEQLSPMGKFLDRAHHLVLPVVTLTIVSVGSLMRYTRTNMLEVLNSDYIRTARAKGLSEKKVINYHAFRNTLIPVVTIIGGSLPGLFAGAMITETLFQIEGIGYTSYQAMTTGDIPFSMFYMVFMAMLTLLGNLIADILYAVVDPRVRVN
SIO_010081: SD1D_RS02150
subclass of: SO_0000673
so part of: SD1D_RS02150
location: 442112..443098
location: region:442112-443098:1
so has part: feature:442112-443098:1:exon

WP_058257403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442112-443098:1:exon

SD1D_RS12380
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12380
old locus tag: SD1D_0434
so part of: sequence
location: 443112..444854
location: region:443112-444854:1
so has part: feature:443112-444854:1:exon
subclass of: SO_0000010

position:443112:1
position: 443112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444854:1
position: 444854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443112-444854:1:exon

SD1D_RS12380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12380
old locus tag: SD1D_0434
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006860666.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSKDYENTKTSTSLALDDEQRVKVLSPGMLVAKRFFRNRLAVVGLVILASMFVFSFIGGLLAPYGETQVFKVYESVEKDYAGVSINNDYQYFDAEGETFPSVARAQLILAINKEKESFESGGVTYSLVKEGEDFYRVIQFQEVATVVSLKGINRFTAAQGETVSKEMEEAYLAASDAGEKSFELNGITYYINQKGKNTSIAKPKEISIVSKMIFNAYSPDTELDYSFRFAAQKAMNDKETFFEVNGATYEMELDEEDNTAVFYLVEGNTKTEYALVSNVSISAVDNEFLTIDFKEAIIKAIDNGDKGFVYPDKDGVDVEYKINRKNNQFTVRRHTETELINVYEAPSKKHLLGTDGNGMDIFTRLMYGGRISLIIGFVVVIIETIIGVILGGMAGYFGGWVDNLIMRVVDIVYCIPSMPLYIILGSVMDFLKIDPQLRIFMLMIILALLGWPGIARMVRGQILSLREQEFMTATEALGIRVSRRIFRHLVPNVIPQLTVIGTMSLGSIILTEATLSYLGLGVKFPFASWGNIINAVNNIYVMTNYWFVWIPAGLLILVTVLGFNFVGDGLRDAFDPKMKR
SIO_010081: SD1D_RS12380
subclass of: SO_0000673
so part of: SD1D_RS12380
location: 443112..444854
location: region:443112-444854:1
so has part: feature:443112-444854:1:exon

WP_242955242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443112-444854:1:exon

SD1D_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02165
old locus tag: SD1D_0435
so part of: sequence
location: 444864..446036
location: region:444864-446036:1
so has part: feature:444864-446036:1:exon
subclass of: SO_0000010

position:444864:1
position: 444864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446036:1
position: 446036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444864-446036:1:exon

SD1D_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02165
old locus tag: SD1D_0435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198840.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MALFKNKKVKDVNYISAKESRRISRENRKITSEIEKKRNRKNVPREEYITKMRDPNNVLEFDNLHTYFFTDIGTVKSVDGVSFDIPLGKTVGVVGESGCGKSVTSLSAMQLVQRPQGQIVSGSIRFNTGKEVYDIAKTPTYEMQKLRGNMISMIFQEPMTSLNPVFRIGTQLDEVIELHNENMSKAEIKARSIEMLEMVGIANSEGVYKMYPHELSGGMRQRVMIAMGLACNPRLIIADEPTTALDVTIQAQILDLLRNLKDKINSSIMLITHDLGVIAEMADYVVVMYAGRVVERGTAEEIFKNPSHPYTIGLMNSKPVVGKKVDRLYSIPGKVPNPVDMPNYCYFRDRCDKCIKKCDGAYPEEIYLSPTHAVSCYLYYDKKGALENGN
SIO_010081: SD1D_RS02165
subclass of: SO_0000673
so part of: SD1D_RS02165
location: 444864..446036
location: region:444864-446036:1
so has part: feature:444864-446036:1:exon

WP_058257404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444864-446036:1:exon

SD1D_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02170
old locus tag: SD1D_0436
so part of: sequence
location: 446026..447024
location: region:446026-447024:1
so has part: feature:446026-447024:1:exon
subclass of: SO_0000010

position:446026:1
position: 446026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447024:1
position: 447024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446026-447024:1:exon

SD1D_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02170
old locus tag: SD1D_0436
EC number: 7.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014078773.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0015833 - peptide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipeptide ABC transporter ATP-binding protein
translation: MATNNQNEQTSEYILEVNNLKKYFPIKTSVFSKQKGEVKAVDDISFKIKRGTTMGLVGESGCGKSTAGRTILRLIEKTAGEVLFNGKDIYSLNKAELRQLRTKMQIIFQDPYSSLSPRLPIGEIIGEAVKEHNIVPKNEYEDYLDEIMAACGLQPYHKDRYPHEFSGGQRQRICIARALAVNPEFIVCDEPVSALDVSIQAQIINLLSDLQKQRNLTYLFISHDLSVVEHISDTVGVMYLGSLVEYGNKEDIFKNPAHPYTQALLSAVPIPDTDVKMNRIILEGSIPSPANPPSGCKFHTRCNKCMEICKTEVPQVKELEDGHFVQCHLYND
SIO_010081: SD1D_RS02170
subclass of: SO_0000673
so part of: SD1D_RS02170
location: 446026..447024
location: region:446026-447024:1
so has part: feature:446026-447024:1:exon

WP_058257405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446026-447024:1:exon

SD1D_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02175
old locus tag: SD1D_0437
so part of: sequence
location: 447052..447315
location: region:447052-447315:1
so has part: feature:447052-447315:1:exon
subclass of: SO_0000010

position:447052:1
position: 447052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447315:1
position: 447315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447052-447315:1:exon

SD1D_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02175
old locus tag: SD1D_0437
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYNKNNTDSINKEDDDRVVANMNIEGMPWHSPGKALYEESSKKQPELSKRELRNFIFSATLGGLLIGAVFVIVFFIFIMFCIHVWF
SIO_010081: SD1D_RS02175
subclass of: SO_0000673
so part of: SD1D_RS02175
location: 447052..447315
location: region:447052-447315:1
so has part: feature:447052-447315:1:exon

WP_058257406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447052-447315:1:exon

SD1D_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02180
old locus tag: SD1D_0438
so part of: sequence
location: 447698..449350
location: region:447698-449350:1
so has part: feature:447698-449350:1:exon
subclass of: SO_0000010

position:447698:1
position: 447698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449350:1
position: 449350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447698-449350:1:exon

SD1D_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02180
old locus tag: SD1D_0438
inference: COORDINATES: protein motif:HMM:NF012706.2
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide ABC transporter substrate-binding protein
translation: MKYMKLKKIIAVILLLTSTMAILSSCGKKNTNTTDNKKSPYPGTSEDKSITVNITSEPPEMFSVTTTDATSFIVLRHILENLVTLDENDKVIPGVAKEWTVSEDELEYTFYLRDDMKWSNGEPVTAHDFVFAWTSLLTPSFAADYAYFGYVFKNGKAYNEGKVGADQLGFKAISDYELQVTLENPTPYFLDTLAFGVFAPLNEKAYNEFGSAYGTDADKMVYNGPFIMTSWEHESRIVLEKNPDYYDKDKIELEKINMLMINDSNAALNSFKVGELDIVGLTGDQVQLMKNENYPIHSYSDGSTFYLEYNLQNPYLANQNLRKAITYAIDKQAFIDSIVKNDSKVATSFTSPAIHGLNDNFYMEVGKLATEFDLELAKDHYNKALEELNVDKITLSLIIDDNDTAVKNGAFIQEQLRANLGLEINIEPMPFKSRLSRMSNKDFDIVFAGWGPDYNDPLTFLDIFETGNGNNHGSYSNTEYDELLDKVRVELDAKKRFEYLTELEKIVMDDLPVGPIYWRVKDYVLSGKIESGVIRTAFQDLNLKYVKLAK
SIO_010081: SD1D_RS02180
subclass of: SO_0000673
so part of: SD1D_RS02180
location: 447698..449350
location: region:447698-449350:1
so has part: feature:447698-449350:1:exon

WP_058257407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447698-449350:1:exon

SD1D_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02185
old locus tag: SD1D_0439
so part of: sequence
location: 449490..450437
location: region:449490-450437:1
so has part: feature:449490-450437:1:exon
subclass of: SO_0000010

position:449490:1
position: 449490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450437:1
position: 450437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449490-450437:1:exon

SD1D_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02185
old locus tag: SD1D_0439
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005364848.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MAKYIVKRLLYALLTLLVLVSLTFFMMRLLPGDPFIGEKAIPETTMKALNEKYGLDKPVIQQLIIYMGNVFRGDLGLSMHYNRPVNDIIRQAFPYSFDLGMRALIFATVMGILLGIVAAVKRGTHWDTISMLFAIIGVSVPGFIVGSLLQYFFALKLTEWTGIAFFPNTGWDSFSSKLLPSFALSLSSLATVSRLMRTSMLDVLGHDYIKTAKSKGLSQKTIIWKHAVRNAIMPVITVLGPISAALLTGAFVVENIFSIPGMGKFFVFSIQTQDYTLISGTTLFYGAFLILANLVVDIAYGFVDPRVKLSEAKEG
SIO_010081: SD1D_RS02185
subclass of: SO_0000673
so part of: SD1D_RS02185
location: 449490..450437
location: region:449490-450437:1
so has part: feature:449490-450437:1:exon

WP_058257408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449490-450437:1:exon

SD1D_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02190
old locus tag: SD1D_0440
so part of: sequence
location: 450446..451384
location: region:450446-451384:1
so has part: feature:450446-451384:1:exon
subclass of: SO_0000010

position:450446:1
position: 450446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451384:1
position: 451384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450446-451384:1:exon

SD1D_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02190
old locus tag: SD1D_0440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012100848.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MMNIDKSQFEWIGPDTAISEAITRDSTSYWQDAMRRLSKNKTAMAALIIIIVITLCSIFVPIFSPYTMSEQHLTHTNAPIGFRDEQDGHIHLFGTDSLGRDIFTRIWYGGRISLFISFSAVLVNFIIGIIYGGIAGYVGGTLDNIMMRIIEIVNGIPYLIIVVLLMMVLPAGTMTMVIAYATVGWTGMARLVRGQVMSLKQQDYVVAAKVMGAKPARIIGKHLLPNTLSVVIINITLSIPSAIFTEAFLSYIGLGVPVPLASWGTLANEGSKVFQLYPSQLVIPAICISLTMLSFNLLGDGLRDALDPRLRK
SIO_010081: SD1D_RS02190
subclass of: SO_0000673
so part of: SD1D_RS02190
location: 450446..451384
location: region:450446-451384:1
so has part: feature:450446-451384:1:exon

WP_273231722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450446-451384:1:exon

SD1D_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02195
old locus tag: SD1D_0441
so part of: sequence
location: 451415..452434
location: region:451415-452434:1
so has part: feature:451415-452434:1:exon
subclass of: SO_0000010

position:451415:1
position: 451415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452434:1
position: 452434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451415-452434:1:exon

SD1D_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02195
old locus tag: SD1D_0441
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003368228.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNKVLEVNDLHVSFDTYAGEVKAVRGVSFDLNEGEILAIVGESGSGKSVTAQTIMKLNPMPPTRIVSGEILLGDIDIVKASEREMMAIRGNEVSMIFQDPMTCLNPTMQVGKQLTEAIRHHKKLSKDEAYREAIRLLNIVRIPNSKQRVLQYPHEFSGGMRQRVMIAMALSCEPKLLIADEPTTALDVTIQAQIMELLMEIRENTNTSIIIITHDLGVVASIADRVAVMYGGKIVESGSSEDIFYHPSHPYTKALLESLPKTDMDKNKRLASIAGTPPDLLNPPAGCPFAGRCKYTMKICIPHMPPDFEPGKKHKAACWLLHKDCPDPEPASAIGGGEK
SIO_010081: SD1D_RS02195
subclass of: SO_0000673
so part of: SD1D_RS02195
location: 451415..452434
location: region:451415-452434:1
so has part: feature:451415-452434:1:exon

WP_058257410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451415-452434:1:exon

SD1D_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02200
old locus tag: SD1D_0442
so part of: sequence
location: 452431..453423
location: region:452431-453423:1
so has part: feature:452431-453423:1:exon
subclass of: SO_0000010

position:452431:1
position: 452431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453423:1
position: 453423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452431-453423:1:exon

SD1D_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02200
old locus tag: SD1D_0442
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008374465.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MMSKNSQILVEIKDVSKFFKVSSGILKAVNHVNLEIKKGETVGLVGESGCGKSTLGKVIMGIYSPTTGQVIYHGKKELLVKKENLFEYAKLAQIIFQDPYSSLDPRMTVGSIIEEGMIIHNMYNKKVRKERVYELLDLVGLNREHANRYPHEFSGGQRQRIGIARALAIEPEFIVCDEPISALDVSIQSQIINLLKDLQEKLGLTYLFIAHDLNIVKYISDRIAVMYLGNIVELSDSDELYEKPLHPYTRALLSAVPIPDPKKERAKERQLLEGDVPSPINPKHCCPFVSRCPHATDICSRDFPELEMKKGHLVACHHADEPIYNREIIK
SIO_010081: SD1D_RS02200
subclass of: SO_0000673
so part of: SD1D_RS02200
location: 452431..453423
location: region:452431-453423:1
so has part: feature:452431-453423:1:exon

WP_197687597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452431-453423:1:exon

SD1D_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: manA
locus tag: SD1D_RS02205
pseudo: true
so part of: sequence
location: 453529..454461
location: region:453529-454461:1
so has part: feature:453529-454461:1:exon
subclass of: SO_0000010

position:453529:1
position: 453529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454461:1
position: 454461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453529-454461:1:exon

SD1D_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: manA
locus tag: SD1D_RS02205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201379.1
GO function: GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: mannose-6-phosphate isomerase, class I
SIO_010081: SD1D_RS02205
subclass of: SO_0000673
so part of: SD1D_RS02205
location: 453529..454461
location: region:453529-454461:1
so has part: feature:453529-454461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453529-454461:1:exon

SD1D_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02210
old locus tag: SD1D_0445
so part of: sequence
location: complement(454536..456674)
location: region:454536-456674:-1
so has part: feature:454536-456674:-1:exon
subclass of: SO_0000010

position:454536:-1
position: 454536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456674:-1
position: 456674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454536-456674:-1:exon

SD1D_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02210
old locus tag: SD1D_0445
inference: COORDINATES: protein motif:HMM:NF024799.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: MSEPDVRGKQINTRVLLFTTTSLIIFLLALLIFLNSSDSKIANILLSVGLFLVMALAGVLLVTLIRFFQAINLINKNAERLAQGKLNISDIMTDKARGLETLAIVFNEMKRNLLNFIETTKTNVIVLSDAVDKVTKSLDMSYKGNEHIASNMATAAEKAQEQLRIVNETLEGIQEVTERANNITNTLANIEAFVENTVKVTKESAEHVDKYNEQIDIISADLSDTAAFIQALNTHLNEIDQVNGLIINITEQLKLLSLNSAVEAARAGEAGKGFVVVAQEMNKLSQATRESIGQINNLLNNILASNDKVSESITNCVQSFESSREIFNYVRESFYTINKNTYILSDDMKKAYEESRLINENTKKISAQGLTLHDASNEISSITQDVAAVTQESLAENEEINNQALSLQNMLADIKKLLKRYRTSILPVSQASSKRLKIAFLSPLDHAFWESVRQGVLYAMTELKGKNVNVEYIPLQQIDRSTEAYISQLANEKYDGIILPGFVGNKEFFSNARRNKITLMSFYNDFDEGIERVSYFGPDNFTSATMATETLIRAINGEGNIAIVRAPLVTEVFQERRSAIIDVLQKRKKVKLVTEIETDIDNVLVYKAVKEALNKFHRLSGIIVISGGNAGVARAVKEMGLARTIKIVCFDYDNEVLNYIREGVIHAAIGQDPFSQGHDSVISMYNYLVTGKKPASNSYTRTELVDISSVSE
SIO_010081: SD1D_RS02210
subclass of: SO_0000673
so part of: SD1D_RS02210
location: complement(454536..456674)
location: region:454536-456674:-1
so has part: feature:454536-456674:-1:exon

WP_058257411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454536-456674:-1:exon

SD1D_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02215
old locus tag: SD1D_0446
so part of: sequence
location: complement(456918..457292)
location: region:456918-457292:-1
so has part: feature:456918-457292:-1:exon
subclass of: SO_0000010

position:456918:-1
position: 456918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457292:-1
position: 457292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456918-457292:-1:exon

SD1D_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02215
old locus tag: SD1D_0446
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013724356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNFKYSNSDSLVRHLYNFIGDTVTIFTTSGGASGGGFTGTLLSVNSNFVRLLTKMGDPPPSPLSGSFRNCPENAPLADFGNFGVPGGSDNILMNKHKNSQNNEVGSICDIPIDRIAAFCHKAV
SIO_010081: SD1D_RS02215
subclass of: SO_0000673
so part of: SD1D_RS02215
location: complement(456918..457292)
location: region:456918-457292:-1
so has part: feature:456918-457292:-1:exon

WP_058257412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456918-457292:-1:exon

SD1D_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02220
old locus tag: SD1D_0447
so part of: sequence
location: 457465..459270
location: region:457465-459270:1
so has part: feature:457465-459270:1:exon
subclass of: SO_0000010

position:457465:1
position: 457465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459270:1
position: 459270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457465-459270:1:exon

SD1D_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02220
old locus tag: SD1D_0447
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013279606.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 2
translation: MNVKDAIRTLLFKRKNMIFNQLYTVWGENLDDEKVLTEYPRPQLKRSNYTILNGYWKYNITKEDVKPPYYDGKILVPFSPESALSKVMRQVKPGEILWYERPLIVEEKPYGKRLILHFGAVDQSCEILINYKKIEQHMGGYLPFSVDITDYITEGGNLLTVKVKDFSDKSYHSRGKQKLRRGGMFYTAQSGIWQTVWMEWVPQVHISSLSITPLVDESSIRLSINLNRPIRNSQEDRKMQQKFFKVDIYDHGKRIYSIIDDKPTLDIPMKNFTFWSPENPYLYDMVIRAGEDVVESYFAMRKVEIKEDEEGVPRIYLNNKPYFQNGLLDQGYWPDGLYTAPSDEAMIFDIEQAKALGFNMLRKHLKIEPLRWYYHCDRLGMLVWQDMVNGGGRYNKLLVGYLPTVFPKVQSLIKDRCYFLFGRTSKKGRLEWIEECEETIKHLYNNPSIVTWVPFNEAWGQFDANKICQLIRSVDNSRLIDHASGWYDQKGGDFKSIHNYFHPLKYKKDKYNRAVVLSEFGGYACYIRKHSYSPMVYGYRIYTDTNSLEEAVKKLYKEDIERLKKEGLSAAVYTQLSDVEDEVNGLFTYDRKVCKVTKPLI
SIO_010081: SD1D_RS02220
subclass of: SO_0000673
so part of: SD1D_RS02220
location: 457465..459270
location: region:457465-459270:1
so has part: feature:457465-459270:1:exon

WP_058257413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457465-459270:1:exon

SD1D_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02225
old locus tag: SD1D_0448
so part of: sequence
location: complement(459365..461077)
location: region:459365-461077:-1
so has part: feature:459365-461077:-1:exon
subclass of: SO_0000010

position:459365:-1
position: 459365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461077:-1
position: 461077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459365-461077:-1:exon

SD1D_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02225
old locus tag: SD1D_0448
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012200071.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein
translation: MRKIMIPVMSILLLALIVAGIYSINKPKKELSYPAFLEAVNNGQVQEVIYSEEGANFEAYLKEEANRKYEVTNPKSENFVEFLLLNNIKVSHKNNNATGFFGVFFVAIIAFAIIYYTRGGNSSKNLISKANKKDKEDKKITLDSVAGNVEAKSMVEDIIGFIKNPSLYSQVGARMPKGLLFYGPPGTGKTLMAKAIAGEADVPFYAMSGSDFVQMYVGVGASRIRTLFNKAKKHEKAVIFIDEIDAIGKKRARNSSASNDERDQTLNALLTEMSGFHDNQGIVVIGATNRLDTLDEALLRPGRFDRQIEIGLPDINSRKKILELHTKNKPLSDDVDLKALAKSTVGFSGAMLENLINEAAILAAKQQKKVISQSHIDRAFYTVLAGAPKTDLSYISYREREITAYHEAGHALATKLLLPENYISKVTIIPSVKGAGGFNLSIPKDSMYQSQRQILANIKMLLAGRAAEELIFGSQEITTGAGNDIQKASSLVVDYTNKFGMDPDMGLFSTYILQEGIDQELLEKCRSIINTLYEETKELLSQNIYALKNIARELLIKESLTGEDIEDLIA
SIO_010081: SD1D_RS02225
subclass of: SO_0000673
so part of: SD1D_RS02225
location: complement(459365..461077)
location: region:459365-461077:-1
so has part: feature:459365-461077:-1:exon

WP_242955243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459365-461077:-1:exon

SD1D_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02230
old locus tag: SD1D_0449
so part of: sequence
location: 461260..462996
location: region:461260-462996:1
so has part: feature:461260-462996:1:exon
subclass of: SO_0000010

position:461260:1
position: 461260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462996:1
position: 462996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461260-462996:1:exon

SD1D_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02230
old locus tag: SD1D_0449
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013272117.1
GO function: GO:0008236 - serine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S8 family peptidase
translation: MDSGIVDNQLNLALDVPEDVRERTLDLDVGYEPQTNTWELIIKYSGSLDRIREDLDIAVVELSGGYAIITIAENLIDRLLNYEEIEFIEKPKRLFYEVDEGRAASCINPIQLSPYNLFGRGVLVAILDSGIDYSHPDFRNEDGTTRIVALWDQTIPGNPPEGFRIGSLYTREQINEALTFPMPQRLDIVPSTDLSGHGTHVAGIAAGNGRASNGRYRGVASESELLVVKLGESISGSFPRTTQLMEALDFVVQYAIDLNRPLAVNISFGNNYGSHTGRSLLESFINDISNRGRTSIVVGTGNEGAQGNHAWGILQMGVVETVAFAVSEFEFSLNLQIWKNYYDHFDISIIAPNGVRVGPIPRRLGTQQFRVAQTEILLYYGEPTPYNPQQEIYIEFIPMQDFINSGVWMIELVPRRIIVGNYDMWLPSGGAKNPATRFLVSSEFTTLTIPSTAYRVISVGAYNAYTESLAPFSGRGYTRDMQIKPDIVAPGVNINSCAPGGGYAIRSGTSMATPFVTGSAALLMEWGIVRGNDLYLYGEKLKSYLIDGARQLRIENVYPNRTLGYGALCLENTFRNII
SIO_010081: SD1D_RS02230
subclass of: SO_0000673
so part of: SD1D_RS02230
location: 461260..462996
location: region:461260-462996:1
so has part: feature:461260-462996:1:exon

WP_058257414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461260-462996:1:exon

SD1D_RS12250
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS12250
old locus tag: SD1D_0450
so part of: sequence
location: complement(463082..463234)
location: region:463082-463234:-1
so has part: feature:463082-463234:-1:exon
subclass of: SO_0000010

position:463082:-1
position: 463082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463234:-1
position: 463234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463082-463234:-1:exon

SD1D_RS12250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS12250
old locus tag: SD1D_0450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0036376 - sodium ion export across plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: OadG family transporter subunit
translation: MGENVMYALEIMGKGMASIFVVIILLTLIVMLMAKIGESSTKSKGQNNQE
SIO_010081: SD1D_RS12250
subclass of: SO_0000673
so part of: SD1D_RS12250
location: complement(463082..463234)
location: region:463082-463234:-1
so has part: feature:463082-463234:-1:exon

WP_173803191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463082-463234:-1:exon

SD1D_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02240
old locus tag: SD1D_0451
so part of: sequence
location: complement(463248..464405)
location: region:463248-464405:-1
so has part: feature:463248-464405:-1:exon
subclass of: SO_0000010

position:463248:-1
position: 463248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464405:-1
position: 464405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463248-464405:-1:exon

SD1D_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02240
old locus tag: SD1D_0451
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006772649.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium ion-translocating decarboxylase subunit beta
translation: MEFLFSGFMSITWQQWVMYGVGLLLIYLAIEKGFEPALLLPMGFGAILVNLPDSGVLTQKLEGLNEEATGIIEWLFETGIDASEALPILLFIGIGAMIDFGPLLSNPKMFLFGAAAQFGIFFTILLAVILGFDINDAASIGMIGAADGPTSILVSKILKSGYIGPIAVAAYSYMALVPIVQPFAIKLVTTKKERLIRMEYNPKSVTRTTRILFPIIVTFIAGLIAPSSVALVGFLMFGNLIRECGVLNALSETAQNTLANLITLLLGITISFSMQADQFVNYKTLMIMGLGLLAFIFDTIGGVLFAKILNLFLKKDKKINPMVGAAGISAFPMSARVVQKMGLKEDPSNHLLMHAISANVSGQIASVVAGGVIIKIVNAILQNMA
SIO_010081: SD1D_RS02240
subclass of: SO_0000673
so part of: SD1D_RS02240
location: complement(463248..464405)
location: region:463248-464405:-1
so has part: feature:463248-464405:-1:exon

WP_058257415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463248-464405:-1:exon

SD1D_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02245
old locus tag: SD1D_0452
so part of: sequence
location: 464879..466978
location: region:464879-466978:1
so has part: feature:464879-466978:1:exon
subclass of: SO_0000010

position:464879:1
position: 464879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466978:1
position: 466978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464879-466978:1:exon

SD1D_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02245
old locus tag: SD1D_0452
EC number: 3.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009059925.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium-translocating pyrophosphatase
translation: MGNDLTFFQVVSIVISALAFVTAFWLYRWVSSQPSSNKKIAEVGKLIQNGANTFLAKEYKTLVRFCSVVALLILVFLPSPIWKGNIVDNISMVASYILGTVLSAIAGKIGISIATIANMKSAEAATKGIKPSFMAGYRGGAVMGMAVVGSSLLGVTLVLMLTGNTTVLLGFSFGASSLALFAKAGGGIFTKTADVSADLAGKVELGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFDSNVASMAAALVMAASLSNSEKNMGMVLCYAAIGLLASIIGVFTANMKEGADPTRALNMNTYVTTAIYGVLTAVATYIFDFNWRIWGASAIGLIVGVIIGIATDYFTNDNKKPVKMVAKACESGPAFTITSGVSYGLVSTLPAMIGIGVSALAAYKLVAPLGAGGNEVAYGMYGISMAAVGMLSIVGMIISNDAYGPIVDNARGLVEMGDLGDKALEITDSLDSAGNTVKAITKGFSIGAAGLTVIALLGAFITEVNDAIVALGLNVEKVTGFDVTNPTVFFGLLVGAAIPPVFSAMLMLGVDRNAQRMIAEIHRQFREIAGLKEGKEGVKPEYDKCIEIATVGALKELIPAGLMAIISTLLVGLIGGVHAVGGFITGNIVSGLIFALFMSNSGGLWDNTKKYIEAGNHGGKNSKAHKAGVVGDTVGDPFKDTAGPSINTQITVVSLVASIAATLFLTISIF
SIO_010081: SD1D_RS02245
subclass of: SO_0000673
so part of: SD1D_RS02245
location: 464879..466978
location: region:464879-466978:1
so has part: feature:464879-466978:1:exon

WP_058257416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464879-466978:1:exon

SD1D_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02250
old locus tag: SD1D_0453
so part of: sequence
location: 467171..468361
location: region:467171-468361:1
so has part: feature:467171-468361:1:exon
subclass of: SO_0000010

position:467171:1
position: 467171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468361:1
position: 468361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467171-468361:1:exon

SD1D_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02250
old locus tag: SD1D_0453
inference: COORDINATES: protein motif:HMM:NF024824.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MKKLIFYIGLFFVMIFLTTGCSKSGGYYRSGKNYFISGDYHKAAENFSLSITKNPNKAEYYIDYGMALIGLGQYQEAFVQFDKVIMDKKITIVLKNNKRALRGKGIAYFMMQDFQEAINQFDKALDINVLSELDLDILYYKGRALTNIGDFKEAAATYSRIIDQFGQDAQVLADRAYTYHKSGEYVEGLNDYDKAITLQSDKFDYYFGKYYLLMDMGKPNEAQEVLRQAEEIKIITKADKYNLAKVHFYQGLYDQAIYELSESAGNGFVEANFYIGEIYNHKKDYPTAKYYYEKYIEEGGVPLPWIYSQIASCLMKTGEYKQAIPYLETGINYAHNDMKRELLKSLIIVYENLGDFENALIKLESYLASYPGDEDAKREEIFLKSRTKEFSTTNNP
SIO_010081: SD1D_RS02250
subclass of: SO_0000673
so part of: SD1D_RS02250
location: 467171..468361
location: region:467171-468361:1
so has part: feature:467171-468361:1:exon

WP_058257417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467171-468361:1:exon

SD1D_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: hflX
locus tag: SD1D_RS02255
old locus tag: SD1D_0454
so part of: sequence
location: 468373..469629
location: region:468373-469629:1
so has part: feature:468373-469629:1:exon
subclass of: SO_0000010

position:468373:1
position: 468373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469629:1
position: 469629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468373-469629:1:exon

SD1D_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: hflX
locus tag: SD1D_RS02255
old locus tag: SD1D_0454
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008372876.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase HflX
translation: MAKLYDIEEAKEQFVLIGVSVSDNDDTKESLEELKELVETAGALTVGMVIQNREKIHPATYIGKGKIEEVRQMIFEADATGVICDDELSPAQLKNLEDALQTKVLDRTILILDIFAKRATTKEGKLQVELAQLKFSSTRLIGLRNSLSRLGGGIGTRGPGEKKLEIDRRHIRERISQLKRELDDLEKNRETARSLRSRSKIPVVAIVGYTNAGKSTLLNYLTGAGVLEEDKLFATLDPTTRSYTMESGQQVLFTDTVGFIRKLPHHLIEAFRSTLEEAKYADIILHVVDSINPDLYKQMHIVYDTLAKLGIRDKAIITVFNKQDLIISEQALKDFKADYTVKISAKTGEGVDKLLELIEKVLMEQKVFIEELISYKEAGKIHTIRKYGQLLEEEYREDGIFVKAYIPKEFAGNISAFN
SIO_010081: SD1D_RS02255
subclass of: SO_0000673
so part of: SD1D_RS02255
location: 468373..469629
location: region:468373-469629:1
so has part: feature:468373-469629:1:exon

WP_058257418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468373-469629:1:exon

SD1D_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02260
old locus tag: SD1D_0455
so part of: sequence
location: 469797..472172
location: region:469797-472172:1
so has part: feature:469797-472172:1:exon
subclass of: SO_0000010

position:469797:1
position: 469797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472172:1
position: 472172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469797-472172:1:exon

SD1D_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02260
old locus tag: SD1D_0455
EC number: 1.17.4.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198566.1
GO function: GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleoside triphosphate reductase
translation: MINVLKRDGQVAEFNLQKISEAITKAFKATDKIFTDEIISLLSLRVTADFQDKIKESKIHVEDIQDSVEHVLEQSGYTDVAKAYILYRKNREKIRNMKSTILDYKETINSYVKEEDWRVKENSTVTYSVGGLILHNSGKVTANYWLSEIYDEEIANAHRNADIHIHDLSMLTGYCAGWSLKQLIKEGLGGIPGKITSSPASHLSTLCNQMVNFLGIMQNEWAGAQAFSSFDTYLAPFVKADNLTYKEVKQCIQSFVYGVNTPSRWGTQAPFSNITLDWTVPDDLAELPCIVGGREMDFKYKDCKKEMDMINKAFIEIMIEGDANGRGFQYPIPTYSITKDFDWSDTENNRLLFEMTAKYGTPYFSNYINSDMEPSDIRSMCCRLRLDLRELRKKTGGFFGSGESTGSVGVVTINMPRIAYLSANEEEFFKRLDKMMDISARSLKVKRDVITKLLEEGLYPYTKRYLGTFENHFSTIGLVGMNEVGLNAKWLGKDMTHKETVDFSIKVLNHMRERLSDYQEQYGDLYNLEATPAESTSYRLAKHDKKRYPDIKTAGNEGDTPYYTNSSHLPVGYTEDIFEALDIQDELQTLYTSGTVFHAFLGEKLPDWQGAAKLVRTIAENYRLPYYTLSPTYSVCSTHGYLNGEHFTCPECGQRAEVYSRITGYYRPVQNWNEGKTQEYKNRRLYDIVRSRQMPVSSGIRSESQINLLSGLDDGLYLFTTKTCPNCNLAKEYLKDTPYTLIDAEDNPNLSMEYNILQAPTLLEVSKGVVNKYTNASNIKKYVDAQSLRLQ
SIO_010081: SD1D_RS02260
subclass of: SO_0000673
so part of: SD1D_RS02260
location: 469797..472172
location: region:469797-472172:1
so has part: feature:469797-472172:1:exon

WP_058257419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469797-472172:1:exon

SD1D_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: thyA
locus tag: SD1D_RS02265
old locus tag: SD1D_0456
so part of: sequence
location: 472320..473165
location: region:472320-473165:1
so has part: feature:472320-473165:1:exon
subclass of: SO_0000010

position:472320:1
position: 472320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473165:1
position: 473165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472320-473165:1:exon

SD1D_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: thyA
locus tag: SD1D_RS02265
old locus tag: SD1D_0456
EC number: 2.1.1.45
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009002428.1
GO function: GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO process: GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thymidylate synthase
translation: MSLADKIFIDMCNDILENGTSTEGEKVRPKWEDGSPAYTIKKFGVVNRYDLSKEFPALTLRRLAFKSCIDELLWIWQKKSNNINELNSHIWDSWADEEGSIGKAYGYQMQVKHKYKEGEMDQVDRVIYDLKNNPYSRRIITNLYVHQDLHEMNLYPCAYSMTFNVTKEKDSEQLVLNAILNQRSNDILAANNWNVCQYAVLVHMLAQVCGYKVGELVHVIADAHIYDRHIPIIQELIKRPIYEAPEFYINPEIKDFYQFKVEDFELRNYKYGPKVEIPVAI
SIO_010081: SD1D_RS02265
subclass of: SO_0000673
so part of: SD1D_RS02265
location: 472320..473165
location: region:472320-473165:1
so has part: feature:472320-473165:1:exon

WP_058257420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472320-473165:1:exon

SD1D_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02270
old locus tag: SD1D_0457
so part of: sequence
location: 473209..473703
location: region:473209-473703:1
so has part: feature:473209-473703:1:exon
subclass of: SO_0000010

position:473209:1
position: 473209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473703:1
position: 473703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473209-473703:1:exon

SD1D_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02270
old locus tag: SD1D_0457
EC number: 1.5.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016439340.1
GO function: GO:0004146 - dihydrofolate reductase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrofolate reductase
translation: MNLIVAVDKNWAIGYKNKLLVRIPADQRFFRNETINKAVIMGRKTLESFPGGLPLKDRLNVVLTSDPNYKVKDAVVVNSIEKALEAVKEYNTEDVYVIGGESIYRQMLPLCDVAHVTKIDYAYQADAYFPNLDEMEDWVITGESDEQTYYDIAYTFYKYERKIL
SIO_010081: SD1D_RS02270
subclass of: SO_0000673
so part of: SD1D_RS02270
location: 473209..473703
location: region:473209-473703:1
so has part: feature:473209-473703:1:exon

WP_058257421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473209-473703:1:exon

SD1D_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02275
old locus tag: SD1D_0459
so part of: sequence
location: 473786..474856
location: region:473786-474856:1
so has part: feature:473786-474856:1:exon
subclass of: SO_0000010

position:473786:1
position: 473786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474856:1
position: 474856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473786-474856:1:exon

SD1D_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02275
old locus tag: SD1D_0459
EC number: 2.6.1.42
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009290758.1
GO function: GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO process: GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid aminotransferase
translation: MLDIKTTKTTTPKELPDKDDPLKFGTIFTDHMFIMDYEEGKGWHDARIIPYQPISLEPSAMVFHYGQEMFEGLKAYKTEDGRILLFRPHMNAKRTNNTCRRLCIPEIPEEDFVQAIKELVKIDKAWIPTKEGTSLYIRPFIIATDPFLGVRPSHTYKFMIILSPVGPYYPEGLNPVKIWIEDEYVRAVKGGIGEAKAGGNYVASLKAQIKAYEEGYSQVLWLDGVHRKYIEEVGAMNIFFKINNVVVTPKLNGSILPGVTRDSVIKMCNHWGIKVEERLISIDEVYNAHKDGLLEEVFGTGTAAVISPVGHLRWENHIMQVEDGGIGPLSQKLYNTLTGIQLGKIEDVYNWTVEVE
SIO_010081: SD1D_RS02275
subclass of: SO_0000673
so part of: SD1D_RS02275
location: 473786..474856
location: region:473786-474856:1
so has part: feature:473786-474856:1:exon

WP_058257422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473786-474856:1:exon

SD1D_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02280
old locus tag: SD1D_0460
so part of: sequence
location: 474927..475424
location: region:474927-475424:1
so has part: feature:474927-475424:1:exon
subclass of: SO_0000010

position:474927:1
position: 474927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475424:1
position: 475424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474927-475424:1:exon

SD1D_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02280
old locus tag: SD1D_0460
inference: COORDINATES: protein motif:HMM:NF040325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6106 family protein
translation: MNDLYAEAGVKRKDTAATMGLKALMILGVLAGLFFIFIGQIFTFVGIGILIAIFFLFPSLDIEYEYVFVDGQIDFDRITGKSRRKTILRIDFDQVEIMAPLNSPVLDSYNHMQLEKKDFSSLSKDSKPYVIIANVDNKKMKIMFEPSEKMLAMIKQKSPRKISNY
SIO_010081: SD1D_RS02280
subclass of: SO_0000673
so part of: SD1D_RS02280
location: 474927..475424
location: region:474927-475424:1
so has part: feature:474927-475424:1:exon

WP_058257423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474927-475424:1:exon

SD1D_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: guaB
locus tag: SD1D_RS02285
old locus tag: SD1D_0461
so part of: sequence
location: 475624..477078
location: region:475624-477078:1
so has part: feature:475624-477078:1:exon
subclass of: SO_0000010

position:475624:1
position: 475624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477078:1
position: 477078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475624-477078:1:exon

SD1D_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: guaB
locus tag: SD1D_RS02285
old locus tag: SD1D_0461
EC number: 1.1.1.205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005950784.1
GO function: GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IMP dehydrogenase
translation: MAQIIGDGITFDDVLLVPAYSEVLPNQVDLTTQLTKKIKLNIPLMSAGMDTVTENRMAIAMARQGGIGVIHKNMSIEEQAEEVDKVKRSEHGVITDPFYLSPEHTLHDANELMAKYRISGVPITVGKKLVGIITNRDLKFEEDFSKKIKECMTSEGLITAKEGITLDEAKQILGAARKEKLPIVDDQGNLKGLITIKDIEKQMKYPLSAKDEQGRLLCAAAVGITSNIMERVEALVKAKVDAIVIDTAHGHSANVLKVVKMVRDAFSDIQIIAGNVATGEATYDLIKAGVDAVKVGIGPGSICTTRVVAGIGVPQITAIMDAYEVAQKYGVPIIADGGIKYSGDITKALAAGANVCMMGSIFAGCDESPGTFELFQGRKYKVYRGMGSIAAMEKGSKDRYFQTDAKKLVPEGVEGRVAYKGTVEDTVFQLIGGLRAGMGYCGAKDIESLQKTGKFVKITAASLRESHPHDIHITKEAPNYSVEE
SIO_010081: SD1D_RS02285
subclass of: SO_0000673
so part of: SD1D_RS02285
location: 475624..477078
location: region:475624-477078:1
so has part: feature:475624-477078:1:exon

WP_058257424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475624-477078:1:exon

SD1D_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02290
old locus tag: SD1D_0462
so part of: sequence
location: complement(477163..477642)
location: region:477163-477642:-1
so has part: feature:477163-477642:-1:exon
subclass of: SO_0000010

position:477163:-1
position: 477163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477642:-1
position: 477642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477163-477642:-1:exon

SD1D_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02290
old locus tag: SD1D_0462
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004850296.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dCMP deaminase family protein
translation: MKREDYINWDAYFMGIALLSAERSKDPNTRVGACIVSEDNKILSVGYNGMPMGCSDDEFPWSREGNPLDTKYPYVCHAELNAILNFAGNDMKGAKIYITLFPCNECAKALIQKGIKEIIYMSDKYAETDIVIASKRMLDAAGVNYRQYNSINKEIILSL
SIO_010081: SD1D_RS02290
subclass of: SO_0000673
so part of: SD1D_RS02290
location: complement(477163..477642)
location: region:477163-477642:-1
so has part: feature:477163-477642:-1:exon

WP_058257425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477163-477642:-1:exon

SD1D_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: pyk
locus tag: SD1D_RS02295
old locus tag: SD1D_0463
pseudo: true
so part of: sequence
location: complement(<477705..479120)
location: region:477705-479120:-1
so has part: feature:477705-479120:-1:exon
subclass of: SO_0000010

position:477705:-1
position: 477705
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:479120:-1
position: 479120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477705-479120:-1:exon

SD1D_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: pyk
locus tag: SD1D_RS02295
old locus tag: SD1D_0463
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008400269.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: pyruvate kinase
SIO_010081: SD1D_RS02295
subclass of: SO_0000673
so part of: SD1D_RS02295
location: complement(<477705..479120)
location: region:477705-479120:-1
so has part: feature:477705-479120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477705-479120:-1:exon

SD1D_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02300
old locus tag: SD1D_0464
so part of: sequence
location: complement(479195..479869)
location: region:479195-479869:-1
so has part: feature:479195-479869:-1:exon
subclass of: SO_0000010

position:479195:-1
position: 479195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479869:-1
position: 479869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479195-479869:-1:exon

SD1D_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02300
old locus tag: SD1D_0464
inference: COORDINATES: protein motif:HMM:TIGR01906.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR01906 family membrane protein
translation: MVKAFKKSDILIGLVFFLLFISIGVVFTINFRPLYYLDIKLLNIPESSGYSKEEIIANYNALIDYSSPFFKGSLSFPTLTASPSGIQHFKEVKDIFTFFYGLAAISLITAVSIIVYKARKRDISYLAVSSLTSIILPIIVGLLLAIDFDTSFLIFHKIFFKNDYWIFDPITDPVINILPAKFFMHCALLIIAIVLICSLILYLVYLYFKGKSGIKYRKSQYLKI
SIO_010081: SD1D_RS02300
subclass of: SO_0000673
so part of: SD1D_RS02300
location: complement(479195..479869)
location: region:479195-479869:-1
so has part: feature:479195-479869:-1:exon

WP_087758726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479195-479869:-1:exon

SD1D_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: purH
locus tag: SD1D_RS02305
old locus tag: SD1D_0465
so part of: sequence
location: 480068..481621
location: region:480068-481621:1
so has part: feature:480068-481621:1:exon
subclass of: SO_0000010

position:480068:1
position: 480068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481621:1
position: 481621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480068-481621:1:exon

SD1D_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: purH
locus tag: SD1D_RS02305
old locus tag: SD1D_0465
EC number: 2.1.2.3
EC number: 3.5.4.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014356024.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
translation: MRALISVSDKSGIVELAKELKDLGVEIISTGGTYKKLKEAQIPAIEVSEITGFPECLDGRVKTLHPAIHAGLLAMRSNPSHMKQLADLNIETIDLVIVNLYPFKETILKDGVTRAEAVENIDIGGPTMLRSAAKNYQDVAVVVDPRDYDKVLTELKEHGEVSLDTKLYLMHKVFMHTSAYDAMIAEYLKNERNDKSFPESLTMTFEKVQDMRYGENPHQAAAFYREIGKRKGSLTDAVQLNGKELSFNNINDTNGALELLKEFTEPTVVACKHGNPCGVASADNIYEAWKKAYAADKVSIFGGIVVLNRTLTYEMAEEMKDVFLEVVVAPSYEEKALDLLKLKKNLRLLQLPDIDLPQDENAYDLKKVNGGLIVQTIDSKLLHDEDLKVVTDRSPSDKEMEDLLFAWRVVKYVKSNGIALAKNKQTVGIGPGQVNRVWATRQSIEHAAELIDNEATKGAVLASDAFFPFDDCVEAAHQAGITAIIQPGGSIRDEDSIKKCNEYGIAMVFTGMRHFKH
SIO_010081: SD1D_RS02305
subclass of: SO_0000673
so part of: SD1D_RS02305
location: 480068..481621
location: region:480068-481621:1
so has part: feature:480068-481621:1:exon

WP_058257427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480068-481621:1:exon

SD1D_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02310
old locus tag: SD1D_0466
so part of: sequence
location: complement(481787..481987)
location: region:481787-481987:-1
so has part: feature:481787-481987:-1:exon
subclass of: SO_0000010

position:481787:-1
position: 481787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481987:-1
position: 481987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481787-481987:-1:exon

SD1D_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02310
old locus tag: SD1D_0466
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015533189.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MKKGTVKWFNAKKGFGFISDEDGNDVFVHFSALLMDGFKVVEEGDNVEFEVVEGEKGPQAANVVKL
SIO_010081: SD1D_RS02310
subclass of: SO_0000673
so part of: SD1D_RS02310
location: complement(481787..481987)
location: region:481787-481987:-1
so has part: feature:481787-481987:-1:exon

WP_058257428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481787-481987:-1:exon

SD1D_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02315
old locus tag: SD1D_0467
so part of: sequence
location: 482255..485194
location: region:482255-485194:1
so has part: feature:482255-485194:1:exon
subclass of: SO_0000010

position:482255:1
position: 482255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485194:1
position: 485194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482255-485194:1:exon

SD1D_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02315
old locus tag: SD1D_0467
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008976346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: insulinase family protein
translation: MKMNIPSQYRLVFDENLEDLNGWGAYLVHVKTGARIALIKNEDLNKVFYIGFRTPPKNSTGVAHIIEHSVLCGSKNFPAKDPFIELAKGSLNTFLNAMTYSDRTVYPIASQNEQDFKNLMHVYLDAVFYPNIYQRKEIFGQEAWHYDLENENDELLINGVVYNEMKGAFSSPEQQLFRLNQNSLFPDTPYGVESGGDPEFIPELSYEEFLDFHRTYYHPSNSYIFLYGDMDFEERLIWLDKEYLSQFEYLKVDSEIPMQKGFENLREVEEFYSLGEGDNPKENTYLSLNIAIGDSKNKELSLAFQILEYVLFEAPGAPVKQALLDKAIGKDIFSQFNNEYLQPVLSIVAKNSDEDKKQEFLNTISDTLKKLVEEGLNEKSLQAAINFYEFRYREADFGRYPKGLIYGLRVLSSWLYDDDLPFQNLKDTEIYDFLKKQIKTGYFEKLIKDYIINNNHAALVVLKPLAGLNKIRDDKMKEKLAAYKESLSKEELRNIINETKSLRKYQETPSTKEELETIPLLTRQDIEPNPQPIYNEENEVDGIRLVHHDIFTNEIAYFRLLFDIRDIPTELIPYMSLLSLVLGYVDTDNYSYLEYSNEVNIHTGGIYTNVISFSLKDNTKEFLPKFEIGSKVMYDKIPQSFRLIEEMLYHTQLKDYKRLKEIIDEVKSRMQMRFQSSGHTVAVNRAMSYYSEHAMFKELTEGISFYEFLEEITENYGQMKDTIISRLKDLMEMIFVKNKLMVSVTADSTGYKLFLKDFSAFIGGLKKEASERLLSSYDKRPLKPKSLNEGFKAAMQVQYVARAGNYFKAGYKYTGALKVLRMILSYDYLWNNVRVKGGAYGCMCSFSGVDGDVYFTSYRDPNLKETNQVYEDIPKFLESFTADERDITKNIIGTISTLDTPLTPQAKGSRSLSILLSGLTYEDLKREREEIINVSQDDIRALSGLIRAVLDEGHICVIGNESKVEENRDMFSQVKNLMK
SIO_010081: SD1D_RS02315
subclass of: SO_0000673
so part of: SD1D_RS02315
location: 482255..485194
location: region:482255-485194:1
so has part: feature:482255-485194:1:exon

WP_058257429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482255-485194:1:exon

SD1D_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: era
locus tag: SD1D_RS02320
old locus tag: SD1D_0468
so part of: sequence
location: 485211..486137
location: region:485211-486137:1
so has part: feature:485211-486137:1:exon
subclass of: SO_0000010

position:485211:1
position: 485211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486137:1
position: 486137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485211-486137:1:exon

SD1D_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: era
locus tag: SD1D_RS02320
old locus tag: SD1D_0468
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015544667.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase Era
translation: MYEYKNKSGFVTIIGRPNVGKSTLMNRLIGQKIAITSNKPQTTRNKIQTVFTDERGQIIFIDTPGIHKAKNKLGQYMVSVAERTLKEVDLVLWLVEPTTFIGAGERHIAEQLTKIKTPVILVINKIDTVNKNEILTFIATYKDILDFAEIIPVSALKGENTEELIKVIFNYLPYGPMYYEEDTLTDQPERQIVAELIREKALRLLNEEIPHGIAISIEQMKERRNNDNENMGIIDIHANIICEKDSHKGIIIGKGGGMLKKIGTQARMEIENLLDCKVNLQLWVKVKKDWRDNDFLLKNYGFVDKEIE
SIO_010081: SD1D_RS02320
subclass of: SO_0000673
so part of: SD1D_RS02320
location: 485211..486137
location: region:485211-486137:1
so has part: feature:485211-486137:1:exon

WP_058257430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485211-486137:1:exon

SD1D_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02325
old locus tag: SD1D_0469
so part of: sequence
location: 486303..486497
location: region:486303-486497:1
so has part: feature:486303-486497:1:exon
subclass of: SO_0000010

position:486303:1
position: 486303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486497:1
position: 486497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486303-486497:1:exon

SD1D_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02325
old locus tag: SD1D_0469
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRYNYWKNFVKTGKIDDYLNYIACTREESMEEYDQVMSRKEEGGFRAGVDFSDGDGTISHAGW
SIO_010081: SD1D_RS02325
subclass of: SO_0000673
so part of: SD1D_RS02325
location: 486303..486497
location: region:486303-486497:1
so has part: feature:486303-486497:1:exon

WP_058257431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486303-486497:1:exon

SD1D_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: recO
locus tag: SD1D_RS02330
old locus tag: SD1D_0470
so part of: sequence
location: 486469..487182
location: region:486469-487182:1
so has part: feature:486469-487182:1:exon
subclass of: SO_0000010

position:486469:1
position: 486469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487182:1
position: 487182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486469-487182:1:exon

SD1D_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: recO
locus tag: SD1D_RS02330
old locus tag: SD1D_0470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006444428.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RecO
translation: MVLSAMPVGDYDKRLVLLTKELGKISAFAKGARRPNSALLACSQPFSFGEFSLYAGRTSYSIRSADISSYFSELRSDVESVYYGMYFCEFSEYITKENNDEKEILKLLYQTLRAVAKKTIELALIRLIFEIKIMALSGLAPQVFECVKCQKNSEEYRFSVESGGLLCKECRAYDKKAILLSTSSVYTLQYIISRDVERLFNFRVSGQVLKELKACARSYLKHYLNHEFKSTELLGSL
SIO_010081: SD1D_RS02330
subclass of: SO_0000673
so part of: SD1D_RS02330
location: 486469..487182
location: region:486469-487182:1
so has part: feature:486469-487182:1:exon

WP_058257432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486469-487182:1:exon

SD1D_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02335
old locus tag: SD1D_0471
so part of: sequence
location: 487276..487875
location: region:487276-487875:1
so has part: feature:487276-487875:1:exon
subclass of: SO_0000010

position:487276:1
position: 487276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487875:1
position: 487875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487276-487875:1:exon

SD1D_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02335
old locus tag: SD1D_0471
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKALLSTIILLSFIVLVGCKKKEFLLTSDDVSANTLLMKRDGSLLVATIEDFSKEYYNLSELNDFVTGEINAYNKKVGSDEISIEELEIKNGKAIMILRYSKMEHYSEFNKVPAAYYGTDLKEVDLELPSQYIKAGKDKVVDMETAMKNSKNKVLVVYEPYDIIVEGDVKFYSDNATLIEDNKVQSIGEEATVVIFRP
SIO_010081: SD1D_RS02335
subclass of: SO_0000673
so part of: SD1D_RS02335
location: 487276..487875
location: region:487276-487875:1
so has part: feature:487276-487875:1:exon

WP_058257433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487276-487875:1:exon

SD1D_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02340
old locus tag: SD1D_0472
so part of: sequence
location: 487943..489331
location: region:487943-489331:1
so has part: feature:487943-489331:1:exon
subclass of: SO_0000010

position:487943:1
position: 487943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489331:1
position: 489331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487943-489331:1:exon

SD1D_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02340
old locus tag: SD1D_0472
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012739580.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase
translation: MEKTMDKIVALAKARGFVYPGSEIYGGLANTWDYGNLGVELKNNVKRAWWQKFIQENPYNVGIDSAILMNTQTWVASGHLKGFSDPLMDCKECHERFRADKLIEDYVKDQGITLDSSIDGWSFEEMKKFIDDNNIACPTCKKHNFTDIRKFNLMFKTHQGVTEDSKNEVYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEITPGNFIFRTREFEQMELQFFCEPDTDLEWFAYWKQFCIDWLKKLGLKEEELRVRDHDPKELAFYSKATTDIEFLFPFGWGELWGIADRTDYDLTQHQNHSNVDMSYYDDEKKKKYIPYVIEPSVGVDRVTLAFLCSAYDEEELADGDKRTVLHFHPALAPVKIGVLPLSKKLAEPAEKIYMELCKYYNCEYDDRGNIGKRYRRQDEIGTPYCITYDFDSETDNSVTVRDRDTMEQVRIKIDDLKAYFEDKFRF
SIO_010081: SD1D_RS02340
subclass of: SO_0000673
so part of: SD1D_RS02340
location: 487943..489331
location: region:487943-489331:1
so has part: feature:487943-489331:1:exon

WP_058257434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487943-489331:1:exon

SD1D_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: ppdK
locus tag: SD1D_RS02345
old locus tag: SD1D_0473
so part of: sequence
location: 489510..492131
location: region:489510-492131:1
so has part: feature:489510-492131:1:exon
subclass of: SO_0000010

position:489510:1
position: 489510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492131:1
position: 492131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489510-492131:1:exon

SD1D_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: ppdK
locus tag: SD1D_RS02345
old locus tag: SD1D_0473
EC number: 2.7.9.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007708820.1
GO function: GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO process: GO:0015976 - carbon utilization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate, phosphate dikinase
translation: MTKWVYLFKEGKADMRNLLGGKGANLAEMTNLGLPIPQGFTVTTEACTDYYNNGKKIREEIKDQIFEALGKLEEEQGKKFGDSENPLLVSVRSGARASMPGMMDTILNLGLNDVVVEGFAKKTNNPRFAYDSYRRFIQMFSDVVMEVPKAKFDEIFEAIKEKKGVHFDSELDAEDLKEAVTKFKALYKEEKGTEFPQDPKEQLIEAVTAVFRSWDNPRAIYYRRMNDIPGDWGTAVNVQAMVFGNLGETSGTGVAFTRNPSTGEAKIYGEYLINAQGEDVVAGIRTPNPISQLEEDMPEVYQEFMRIAHLLEDHYKDMQDMEFTIEDKKLYFLQTRSGKRTAHAALQIACDLVDEGKITKEEAIQRIDAKSLDQLLHPGFDEAALKEAKVIGSALPASPGAAAGRVYFTAQDAKEHSDKGERVILVRLETSPEDIEGMHASQGILTVRGGMTSHAAVVARGMGTACVSGCGDIVINEEGKYFTLGGHTIKEGDYISLDGSTGNIYLGDIPTVEAEISGNFERIMKWADEIRTLKVRTNADSPADAANAIKFGAEGIGLCRTEHMFFEADRIPKIRKMILSKTVEAREAALNELIPYQKGDFKALYEVMEGRPVTIRFLDPPLHEFVPTEEADIAALAKDMGLSVEEVKATCESLHEFNPMMGHRGCRLAVTYPEIARMQTRAVMEAAIEVKNEKGYDIVPEIMIPLVGEKRELQYVKEVVVETAEAVKKEMGSDIQYHVGTMIEIPRAALLADEIAEEADFFSFGTNDLTQMTFGFSRDDAGKFLEEYYKTKIYESDPFARLDQNGVGQLVQMAAEKGRSTKPNLKLGICGEHGGDPSTIEFCHKVGLDYVSCSPFRVPIARLAAAQAVLNQK
SIO_010081: SD1D_RS02345
subclass of: SO_0000673
so part of: SD1D_RS02345
location: 489510..492131
location: region:489510-492131:1
so has part: feature:489510-492131:1:exon

WP_058257435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489510-492131:1:exon

SD1D_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02350
old locus tag: SD1D_0474
so part of: sequence
location: complement(492309..492935)
location: region:492309-492935:-1
so has part: feature:492309-492935:-1:exon
subclass of: SO_0000010

position:492309:-1
position: 492309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492935:-1
position: 492935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492309-492935:-1:exon

SD1D_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02350
old locus tag: SD1D_0474
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017352407.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSLIRLNNISKKYGKQVVLSNFNLEVEKGEFIGIKGESGKGKSTLLNIIGLLEDCEGNIFFEEKCISSNDTKKVQKLLRNRIGYLFQNFALIDDLSVYDNLKIVLKKSSKKEKMILIQQALEKVGLKDVINKKIYQLSGGEQQRVSVARLILQESDIILADEPTGSLDRKNALIIIKLLEKFHSEGKTIIMVSHDENLFKNCSRIINL
SIO_010081: SD1D_RS02350
subclass of: SO_0000673
so part of: SD1D_RS02350
location: complement(492309..492935)
location: region:492309-492935:-1
so has part: feature:492309-492935:-1:exon

WP_058257436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492309-492935:-1:exon

SD1D_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02355
old locus tag: SD1D_0475
so part of: sequence
location: complement(492954..494837)
location: region:492954-494837:-1
so has part: feature:492954-494837:-1:exon
subclass of: SO_0000010

position:492954:-1
position: 492954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494837:-1
position: 494837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492954-494837:-1:exon

SD1D_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02355
old locus tag: SD1D_0475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIFKGIGLLVSLFSIFFFLLVVDKMHYDSNSPIYDFSLDKYISNQKLDNIAKKADVTIQLREYKEISFGHVEIDVVLINPDINMKLGKKNSVFPNEKVIYSVLSQNDQREIKYFTIQEEQYEKINKVNSLIEKLGYTVTIDVDKPVRLELGMLFSSLNLAFFSSLTILLILCISTYYVSRLKEIGILKLCGWNNRKISFKLLVTMMLQLYSWSLILLIPFGIYVIYSDLSKIDEFVKIVIMVDLFLLAIFILSTIVGTFLIMHIDRVSAIKNKKNNRILFGSLLIFKIMVTFLFVASISNTIQNIANYNATNESVSKLLNYNFYSIRTSSTPEQTVWDKVEKVISQINDDDIYNYASPDNLLNINKLKKFKKDKKLRDVDNCIYTEMSINMLNFVKICNEHGKILKPEDISGNSNVYLVPEHFKNSISDIMNNYGAEEIDQIIYIKDGQVVDDILVAGCYVYDSVFCLYETQKILYLNNGEVLYNENGAKILQSELEKLNIDKGSFAIEPMSMSYNIFKANKQLDICESLFKFIINFVSYILCIISICIIYLELKKKEFSVHKLIGKLPIKTLTNFLVLNFLITITAALYVNIIFLVLVILEYFIYHYMISSYMKHKVILALKGE
SIO_010081: SD1D_RS02355
subclass of: SO_0000673
so part of: SD1D_RS02355
location: complement(492954..494837)
location: region:492954-494837:-1
so has part: feature:492954-494837:-1:exon

WP_058257437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492954-494837:-1:exon

SD1D_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02360
old locus tag: SD1D_0476
so part of: sequence
location: 495553..496740
location: region:495553-496740:1
so has part: feature:495553-496740:1:exon
subclass of: SO_0000010

position:495553:1
position: 495553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496740:1
position: 496740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495553-496740:1:exon

SD1D_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02360
old locus tag: SD1D_0476
EC number: 2.7.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009263031.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004335 - galactokinase activity [Evidence IEA]
GO process: GO:0046835 - carbohydrate phosphorylation [Evidence IEA]; GO:0006012 - galactose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: galactokinase
translation: MRNDLIEIFEKIFGTEGEYRAYFAPGRVNLIGEHIDYNGGHVFPCALTIGTYGVARKRKDKILRFYSMNFKEKGIIESSIDNLVYKKEDDWTNYPKGVIWALQKKGYKIDKGMDILIYGNIPNASGLSSSASLEVLTGFILMKLFNLDISFTDLALYSQYAENKFVGVNCGIMDQFAIAMGKKDHGIFLNTSNLSYEYAPLILADAKIVIMNTNKRRGLGDSKYNQRRRECEQALSDLQKVVPVKELGDLTEEEFEDYKSAIKNPIHVKRAKHAVYENQRTIKAVKALKNKDIALFGQLMNDSHLSLQQDYEVTGIELDTIVEAALRQEGVIGARMTGAGFGGCGVSIVKEAAIENFIKNVGKEYKEKIGYDASFYVVETGNGPEVLVADMVIYG
SIO_010081: SD1D_RS02360
subclass of: SO_0000673
so part of: SD1D_RS02360
location: 495553..496740
location: region:495553-496740:1
so has part: feature:495553-496740:1:exon

WP_058257438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495553-496740:1:exon

SD1D_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02365
old locus tag: SD1D_0477
so part of: sequence
location: 496868..497158
location: region:496868-497158:1
so has part: feature:496868-497158:1:exon
subclass of: SO_0000010

position:496868:1
position: 496868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497158:1
position: 497158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496868-497158:1:exon

SD1D_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02365
old locus tag: SD1D_0477
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAGKCRKIIKLITVTTSLVTFISAVFNFIPRSYLKYKYEINADRIKDGADGPTSVYISAKPNSNFIPFICAILSLLGIIYLTSSKSKYKQNKVKI
SIO_010081: SD1D_RS02365
subclass of: SO_0000673
so part of: SD1D_RS02365
location: 496868..497158
location: region:496868-497158:1
so has part: feature:496868-497158:1:exon

WP_058257439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496868-497158:1:exon

SD1D_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02370
old locus tag: SD1D_0478
so part of: sequence
location: 497180..497476
location: region:497180-497476:1
so has part: feature:497180-497476:1:exon
subclass of: SO_0000010

position:497180:1
position: 497180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497476:1
position: 497476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497180-497476:1:exon

SD1D_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02370
old locus tag: SD1D_0478
EC number: 7.2.4.-
inference: COORDINATES: protein motif:HMM:NF015910.2
GO function: GO:0016829 - lyase activity [Evidence IEA]
GO process: GO:0006814 - sodium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium ion-translocating decarboxylase subunit beta
translation: MFKTEKSRLVILILTIITLLITVIGIIFEYLFPKFIEYKYQIKTENPASIGIIGGADGPTSIFISGTKSGNVLTIICGLVSAAGIIYLLFTKKKRIQK
SIO_010081: SD1D_RS02370
subclass of: SO_0000673
so part of: SD1D_RS02370
location: 497180..497476
location: region:497180-497476:1
so has part: feature:497180-497476:1:exon

WP_058257440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497180-497476:1:exon

SD1D_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02375
old locus tag: SD1D_0479
so part of: sequence
location: 497711..499045
location: region:497711-499045:1
so has part: feature:497711-499045:1:exon
subclass of: SO_0000010

position:497711:1
position: 497711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499045:1
position: 499045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497711-499045:1:exon

SD1D_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02375
old locus tag: SD1D_0479
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006355684.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO process: GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MELGTKKISKLLWQLSIPAILGMLSSAIFNIVDRIFVAKINSNALTAVGITMPVQIIQMAFILLIGIGTSALISIKLGEGKKDEAEDILFIALKYIVIFLLVFAILFMVFLNPILSLFSISEDVMPYAKDYIVIIILGSVIGIPGYCLNNSLRSIGKSKVSMKIIIVTSVMNIILDPIFIFLFKMGIAGAAIATVISQTTLTVYVIYAFIKREDFAINLKFRRVKDEWILLKESLRMGLPSFYVQILAAAVNLFLNNSLLKYGTDLDVAALTIMSSIFSFYHMVVVGLVQGNNAICGYNWGAKLYGRVLKSLKLALFFSFLLSLFLFLLVVLFPQLLVTIFTDDQMLIRQTASGIRYYLFMLPIMGPQAVSSQYFQVVGKSKLSSFLAFFRYGIIIIPSIIILAPKIGVKGIYISNAISDGIAGLIAVIYIMAEIVRLKRMEAA
SIO_010081: SD1D_RS02375
subclass of: SO_0000673
so part of: SD1D_RS02375
location: 497711..499045
location: region:497711-499045:1
so has part: feature:497711-499045:1:exon

WP_058257441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497711-499045:1:exon

SD1D_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02380
old locus tag: SD1D_0480
so part of: sequence
location: 499234..500241
location: region:499234-500241:1
so has part: feature:499234-500241:1:exon
subclass of: SO_0000010

position:499234:1
position: 499234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500241:1
position: 500241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499234-500241:1:exon

SD1D_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02380
old locus tag: SD1D_0480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009254542.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSEIYKRKPLLIVEGLKKYYPQRGSVIGKNRPVIHAVDGVDLEIYEGETLGIVGESGCGKSTIGRQIVALERPTSGRIIYQGQVISDMASSNLRKIRTGLQMVFQDTTSSLNPRKQVYDILAAPMLYHGIVTRDRLDEEINKLLELVGLSKNMKYRYPHEFSGGQRQRIGIAKALSVKPRLIVCDEPVSALDVSVQAQILNLLKQLQEELKLTYVFIAHGLGAVRYVSNRIAIMYLGKIVEIAETKELFDNPVHPYTKALFDASPLPDPSLRKRERIVLKGEIPSAIQPPKGCRFHTRCPYAIESCKVNDPDLLAIRFGSNHKAACPVMQAGGER
SIO_010081: SD1D_RS02380
subclass of: SO_0000673
so part of: SD1D_RS02380
location: 499234..500241
location: region:499234-500241:1
so has part: feature:499234-500241:1:exon

WP_242955244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499234-500241:1:exon

SD1D_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02385
old locus tag: SD1D_0481
so part of: sequence
location: 500241..501185
location: region:500241-501185:1
so has part: feature:500241-501185:1:exon
subclass of: SO_0000010

position:501185:1
position: 501185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500241-501185:1:exon

SD1D_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02385
old locus tag: SD1D_0481
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002568376.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MFRYILKRILIAIPVLIGITILDFAIMNLAGSPLEMMLGPKTTEAALEAKAIQLGLDKPIYVQYFVWLKNVLQGNLGYSIKSYQPVSKLIGDHLGPTLLLMGTSLLLGLAIAIPLGIYSAVHRYKKRDYALVTMSFFGTSVPSFFLSLIFIYLFTVKMGWLPSSGMKTAGGDGGILDILRHMVMPVLVLAISITGSNIRYVRSAVLEILQKEYVRTAKSKGIGRFLVINKHALRNALIPIVTVIGMQIPTLFGGAVIIEQIFSWPGLGLITMNAILNRDYPVIMGVALLTAVVVLAANLITDIIYALVDPTIKY
SIO_010081: SD1D_RS02385
subclass of: SO_0000673
so part of: SD1D_RS02385
location: 500241..501185
location: region:500241-501185:1
so has part: feature:500241-501185:1:exon

WP_058257443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500241-501185:1:exon

SD1D_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02390
old locus tag: SD1D_0482
so part of: sequence
location: 501246..502121
location: region:501246-502121:1
so has part: feature:501246-502121:1:exon
subclass of: SO_0000010

position:501246:1
position: 501246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502121:1
position: 502121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501246-502121:1:exon

SD1D_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02390
old locus tag: SD1D_0482
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007718832.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MKQKSDISENKHGSLKMIVKRFRKHKLAVASLYFLGFMTILALLAPLIAPYDPNQVSTSFSMPPSPKHWLGTDQIGRDMFSRLLYASRISLFVGFSVTVISTLIGVILGLVAGYFGGWVDILIMRITDIIMSFPYMLLVLVAAAIFEPGLWNIILILGFVDWPGAARLVRGNVLSLRETTFVKGNIVAGMPNGYILFSEILPNTVGPILVYATSVFAYSILDEAALSFLGMGVQSPTASLGNILNGAESITILTSKFWLWVPAGVVIILLVVSINFIGDALRDAIDPSAKE
SIO_010081: SD1D_RS02390
subclass of: SO_0000673
so part of: SD1D_RS02390
location: 501246..502121
location: region:501246-502121:1
so has part: feature:501246-502121:1:exon

WP_058257444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501246-502121:1:exon

SD1D_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02395
old locus tag: SD1D_0483
so part of: sequence
location: 502414..502926
location: region:502414-502926:1
so has part: feature:502414-502926:1:exon
subclass of: SO_0000010

position:502414:1
position: 502414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502926:1
position: 502926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502414-502926:1:exon

SD1D_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02395
old locus tag: SD1D_0483
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010073301.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CarD family transcriptional regulator
translation: MFEIGDYIIYGNHGVCRVEDIGGLNIPGVDQSKKCYTLQPVFSKSSTLYTPVDNDKVVMRRVISNEEALELIEQIPDISLIGVENDKQREEAYKEALRHHDCKDWIKIIKTLYVRKQERLSQGKKLTFTDEKYLNIAKDCLFGELSIAMDMNREEVEDLISERLEEVNLV
SIO_010081: SD1D_RS02395
subclass of: SO_0000673
so part of: SD1D_RS02395
location: 502414..502926
location: region:502414-502926:1
so has part: feature:502414-502926:1:exon

WP_058257445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502414-502926:1:exon

SD1D_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02400
old locus tag: SD1D_0484
so part of: sequence
location: 503095..503757
location: region:503095-503757:1
so has part: feature:503095-503757:1:exon
subclass of: SO_0000010

position:503095:1
position: 503095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503757:1
position: 503757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503095-503757:1:exon

SD1D_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02400
old locus tag: SD1D_0484
inference: COORDINATES: protein motif:HMM:NF013672.2
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MNNNKKPSSDMIDYTGKKLVALTFDDGPNLDITPLVLDKLEEYGVVATFFVIGKDVSEDTKPVLERQLELGCEIANHSWSHSYMDKMTVDEIKEEIQKADNIIKQMVNVAPKFFRPPYIAVSETMYEAIDLPFVNGINGLDWEAGVSAKERAEKILTEVKDGDIILLHDFSGNQNTVDALDDIIEGLLDDGYALVTVSKLFELKGVDPNVKNKLWTNTNQ
SIO_010081: SD1D_RS02400
subclass of: SO_0000673
so part of: SD1D_RS02400
location: 503095..503757
location: region:503095-503757:1
so has part: feature:503095-503757:1:exon

WP_058257446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503095-503757:1:exon

SD1D_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: argC
locus tag: SD1D_RS02405
old locus tag: SD1D_0485
so part of: sequence
location: 503924..504895
location: region:503924-504895:1
so has part: feature:503924-504895:1:exon
subclass of: SO_0000010

position:503924:1
position: 503924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504895:1
position: 504895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503924-504895:1:exon

SD1D_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: argC
locus tag: SD1D_RS02405
old locus tag: SD1D_0485
EC number: 1.2.1.38
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020817153.1
GO function: GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO process: GO:0006592 - ornithine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetyl-gamma-glutamyl-phosphate reductase
translation: MKKKIFVDGLSGTTGLGINERLSKYDNIELIKIDYDKRRDINERKKCLNEADLVFLCLPDEAAREAVSLVTNPSTKIIDASTAHRTISGWTYGLPELSPSHKEEIKNSKRVSNPGCHATAFVLSLYPLIKNNIMPADYPVSCQSITGYSGGGKNLIEKYEDKNKDNPYTKAPRPYSLGLNHKHLKEMMVHTGLVNSPIFLPIVANYYKGLATIIPIHTSLLNKKLKGKELYNVLAHHYKNQKFVKVMPYIDEESLGDYKYIFDGGLDITACNDTNLAEIFVIGNDEKNISMIITRLDNLGKGASGAAIQNMNLMLGYEEDLNL
SIO_010081: SD1D_RS02405
subclass of: SO_0000673
so part of: SD1D_RS02405
location: 503924..504895
location: region:503924-504895:1
so has part: feature:503924-504895:1:exon

WP_058257447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503924-504895:1:exon

SD1D_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02410
old locus tag: SD1D_0486
so part of: sequence
location: complement(504973..505428)
location: region:504973-505428:-1
so has part: feature:504973-505428:-1:exon
subclass of: SO_0000010

position:504973:-1
position: 504973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505428:-1
position: 505428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504973-505428:-1:exon

SD1D_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02410
old locus tag: SD1D_0486
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012063212.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MNTNKYDILKLDNQLCFSLYVCSKEIIRKYKPILDPYGLTYTGYIIMMALWEEDGITIKELGKKLFLDSGTLTPLLKKLEMQGYILRNRSKKDERNVYIRLTEKGKSLKDEALSIPDKLLCTLDMDMDEGMKLLNNLHKMMELLTASEDSQ
SIO_010081: SD1D_RS02410
subclass of: SO_0000673
so part of: SD1D_RS02410
location: complement(504973..505428)
location: region:504973-505428:-1
so has part: feature:504973-505428:-1:exon

WP_058259165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504973-505428:-1:exon

SD1D_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02415
old locus tag: SD1D_0487
so part of: sequence
location: 505669..506265
location: region:505669-506265:1
so has part: feature:505669-506265:1:exon
subclass of: SO_0000010

position:505669:1
position: 505669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506265:1
position: 506265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505669-506265:1:exon

SD1D_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02415
old locus tag: SD1D_0487
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010966586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitroreductase family protein
translation: MKELKQLVEGRRTFYAIDKKSPISNQEIREIIEHSVKHVPSAFNSQSARVVLLLGENHDKLWEITREELRKIVPAQSFASTDEKINSFKNGYGTILFFEDQAVIEGLQEQFQLYKESFPVWSLQSSGMLQYTIWISLEGAGLGASLQHYNPLIDDQVKNEWNLPNHWKLLAQMPFGTPKEVPGEKEFAPIDGRVKVFS
SIO_010081: SD1D_RS02415
subclass of: SO_0000673
so part of: SD1D_RS02415
location: 505669..506265
location: region:505669-506265:1
so has part: feature:505669-506265:1:exon

WP_058257448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505669-506265:1:exon

SD1D_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02420
old locus tag: SD1D_0488
so part of: sequence
location: 506461..506940
location: region:506461-506940:1
so has part: feature:506461-506940:1:exon
subclass of: SO_0000010

position:506461:1
position: 506461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506940:1
position: 506940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506461-506940:1:exon

SD1D_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02420
old locus tag: SD1D_0488
EC number: 2.1.1.63
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008428743.1
GO function: GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylated-DNA--[protein]-cysteine S-methyltransferase
translation: MGFGFFYDMPIGQIFIAEDGIGINKVTLAGDINEEDLKKYTMEETKLIKETAGQLREYFEGIRKEFTISLNPQGSSFQKKVWEALLQIPYGETRSYKEIAQIIGNKKAARAVGMANHNNPIMCIIPCHRVIGSDGSLIGYRGGIEIKVKLLQLEKSERK
SIO_010081: SD1D_RS02420
subclass of: SO_0000673
so part of: SD1D_RS02420
location: 506461..506940
location: region:506461-506940:1
so has part: feature:506461-506940:1:exon

WP_087758728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506461-506940:1:exon

SD1D_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02425
old locus tag: SD1D_0489
so part of: sequence
location: 506946..508700
location: region:506946-508700:1
so has part: feature:506946-508700:1:exon
subclass of: SO_0000010

position:506946:1
position: 506946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508700:1
position: 508700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506946-508700:1:exon

SD1D_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02425
old locus tag: SD1D_0489
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201301.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M3 family oligoendopeptidase
translation: MYNEWSLDILYKGLDDEKYKEDFRKLENLIENIESFSKSLGNSQEEEKLLITGIEYMEELEVLGGFLGSYLSLRQSVNTSDSQVVNELNKLEKMYSEISKPLAVIKKWIAGIKDIDKYMEKHPKIKSYEFFINNIKEEAKHLLSDDVEEVIAKLNISAGSAWSNMQGYLTSILEVDYRGKTITIPEVRNLAYSEDASVRKDAYEAELKAYEKIKDAISFSLNNIKTQVNTICDLRGYKSPLDQTLEQSYMKRETLEAMLSAIREYLPVFHKYLKHKAKLLGHENGLPWYDLFAPMGESSSKFTVPQAREYLVSHFKGFSDDLAHMVERAFEEEWIDFFPRKGKVGGAFCSNLTFVKQSRILTNFSGSLSDVITLAHELGHAYHGLHIEDHLPLNTDYSMPVAETASTFNESLIMEAAISQTSGKEKMALIESQLQDLTQIICDIYSRYLFETEVFERSKSGFLFPNELNDIMLRSQKIAYGDGLDHNYLHPYMWVVKGHYYSESLSFYNFPYAFGGLFARGLYEKYKKEGEAFVEKYKALLNATTVSTVEEAAREAEINLEDKEFWRSSLKAVEALVEEFVKIS
SIO_010081: SD1D_RS02425
subclass of: SO_0000673
so part of: SD1D_RS02425
location: 506946..508700
location: region:506946-508700:1
so has part: feature:506946-508700:1:exon

WP_058257449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506946-508700:1:exon

SD1D_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02430
old locus tag: SD1D_0490
so part of: sequence
location: 508831..509040
location: region:508831-509040:1
so has part: feature:508831-509040:1:exon
subclass of: SO_0000010

position:508831:1
position: 508831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509040:1
position: 509040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508831-509040:1:exon

SD1D_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02430
old locus tag: SD1D_0490
inference: COORDINATES: protein motif:HMM:NF024769.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdeI/OmpD-associated family protein
translation: MTLIDGKSDMPIGLGMRLALDMKAMNNFANLSDQKKRELINYIEGAQTGEDAKNRVTEVVSNLHKGSFF
SIO_010081: SD1D_RS02430
subclass of: SO_0000673
so part of: SD1D_RS02430
location: 508831..509040
location: region:508831-509040:1
so has part: feature:508831-509040:1:exon

WP_058257450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508831-509040:1:exon

SD1D_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02435
old locus tag: SD1D_0491
so part of: sequence
location: complement(509126..509995)
location: region:509126-509995:-1
so has part: feature:509126-509995:-1:exon
subclass of: SO_0000010

position:509126:-1
position: 509126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509995:-1
position: 509995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509126-509995:-1:exon

SD1D_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02435
old locus tag: SD1D_0491
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003370483.1
GO function: GO:0005504 - fatty acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegV family protein
translation: MKEFIITTDTTCDLPIEYIEEHNIKVLPLYYSFDNTVYGDKINLDIKEFYDKMRSGNMPTTMAVNPDTARNIFLNLANEGYDILHIAFSSPLSGSCSVAETVARDLMEERPGIKIKVIDSLCASLGEGLLVHKAVMMKKAGKSMDEIVSWLEDNKLNLCHIFTVDDLHHLRRGGRISKTTAIIGSLINVKPILHVNNEGRLVPLNNVRGRKKALISLVDLMEKRIEGFENENDIVFISHGDCLEDANYLASMIKQRLGIENFLINYVSPTIGSHSGPGTIALFFMGNSR
SIO_010081: SD1D_RS02435
subclass of: SO_0000673
so part of: SD1D_RS02435
location: complement(509126..509995)
location: region:509126-509995:-1
so has part: feature:509126-509995:-1:exon

WP_058259167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509126-509995:-1:exon

SD1D_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02440
old locus tag: SD1D_0492
so part of: sequence
location: 510288..510974
location: region:510288-510974:1
so has part: feature:510288-510974:1:exon
subclass of: SO_0000010

position:510288:1
position: 510288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510974:1
position: 510974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510288-510974:1:exon

SD1D_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02440
old locus tag: SD1D_0492
inference: COORDINATES: protein motif:HMM:NF012863.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SGNH/GDSL hydrolase family protein
translation: MSGLLFSIDNGKVEGKMLKNIMCFGDSNTHGFIAASGERYDENTRWTRLLQRHLGIEYYVIEEGLNGRTTVYDDTEIKNTNGKLYLEVCIATHKPLDLVIIMLGTNDTKERFNASPKDIANGMEQLIKILRDPNIYNNEILIISPIHISDKILDSPYCESFGGLAGAEKSRKLAAEYKELAKKYNCHFMDAANYAKADDKDAIHLDKEGHRALAQAVYQKIKEIEKSL
SIO_010081: SD1D_RS02440
subclass of: SO_0000673
so part of: SD1D_RS02440
location: 510288..510974
location: region:510288-510974:1
so has part: feature:510288-510974:1:exon

WP_058257451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510288-510974:1:exon

SD1D_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: recJ
locus tag: SD1D_RS02445
old locus tag: SD1D_0493
so part of: sequence
location: 511036..512745
location: region:511036-512745:1
so has part: feature:511036-512745:1:exon
subclass of: SO_0000010

position:511036:1
position: 511036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512745:1
position: 512745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511036-512745:1:exon

SD1D_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: recJ
locus tag: SD1D_RS02445
old locus tag: SD1D_0493
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008428424.1
GO function: GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded-DNA-specific exonuclease RecJ
translation: MEKCGISEVLARCLVNKGFEDPKDIETFLKPSLDNLYNPFLLKDMDKTCHILKEKIAHGKKIRIIGDYDVDGIVATYILYRTLKKLGAQVDYEIPDRIIDGYGMNIRMVEEAKSHNVDTLLTCDNGIVAIDQIKRAKEFGMTVIVTDHHSLLETDDNTVILPEADAIINPHRRDCTYPFSGLCGAAITYKLAVALLSQYEIPDKEDYLRELLSYTAIATVCDVMELIDENRIIVKHGLSLLKDTRNIGLLALMDACQINKKDLSSFHLGFIIGPCLNASGRLDTAKIGLKLLLSETKSEAMELAGELKNLNEARKDMTAKYVEKAISLIEEGNMLDDKVLVVYIPECHESIAGIIAGRIRERYHRPTLILTDSTDYAKGSGRSIDKYNMIEELSKHRELLIKVGGHPMAAGLSLLPENIDILRKALNENCPLTFEMLIPKITIDILLPLGYLSEELINELKLLEPFGTGNSKPLFAEKDLTIKSIMIIGKNANGIRLRVRNPYGREMDALYFGDVDGFFKYISDKYGPDEVQRLKTGRGSNLKLTVTYYPKINEYKGYKSIQLIIQNYR
SIO_010081: SD1D_RS02445
subclass of: SO_0000673
so part of: SD1D_RS02445
location: 511036..512745
location: region:511036-512745:1
so has part: feature:511036-512745:1:exon

WP_058259168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511036-512745:1:exon

SD1D_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02450
old locus tag: SD1D_0494
so part of: sequence
location: 512925..513449
location: region:512925-513449:1
so has part: feature:512925-513449:1:exon
subclass of: SO_0000010

position:512925:1
position: 512925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513449:1
position: 513449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512925-513449:1:exon

SD1D_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02450
old locus tag: SD1D_0494
EC number: 2.4.2.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006773361.1
GO function: GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenine phosphoribosyltransferase
translation: MKKLEDYVRSIPDFPEPGIIFRDVTTVLQDKDGLKLAIDSIQDLLKDVDFDVIVGPESRGFIFGVPIAYNMNKAFIPVRKKGKLPCETIEMDYDLEYGKATIEIHKDAIKPGQKVVIIDDLIATGGTIEAITKLIKSLGGEVVKIVFLMELKGLKGRDKLAGFDVEAVIQYEGN
SIO_010081: SD1D_RS02450
subclass of: SO_0000673
so part of: SD1D_RS02450
location: 512925..513449
location: region:512925-513449:1
so has part: feature:512925-513449:1:exon

WP_058259169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512925-513449:1:exon

SD1D_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02455
old locus tag: SD1D_0495
so part of: sequence
location: 513522..515807
location: region:513522-515807:1
so has part: feature:513522-515807:1:exon
subclass of: SO_0000010

position:513522:1
position: 513522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515807:1
position: 515807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513522-515807:1:exon

SD1D_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02455
old locus tag: SD1D_0495
EC number: 2.7.6.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198579.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0015970 - guanosine tetraphosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
translation: MDDYMNRSLLYRPAATSVPADFTAPEQLYKKLIDKVIDYHPSADISILEKAYQLAMNAHKDQFRKSGEPYIVHPLCVANILAELELDKESIVAGILHDVVEDTDFTIEQVAEMFTDEIALLVDGVTKLTQLKYSKDKVEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMRPEKQKEIARETMDIYAPIAQRLGISKIKVELDDLSLKYLEPEVYKDLAEKIATKKSERQAYIDSIVADVRFHIDEAGIAAKIDGRIKHFFSIYKKMVNQNKTLDQIYDLFAVRIIVNSLKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPKGQPFEIQIRTFEMHRTAEYGIAAHWKYKEGADGKGVNSSAEEEKLTWLRQVLEWQRDLSDNREFLSLLKNDFDLFSDSVYAFTPTGDVKTLPRGSNTIDFAYSIHSAVGNKMVGARVNGKLVPIDYVIQNGDRVEIMTSQNSRGPSRDWLSIVKSTQAKNKINQWFKSVLKEDNINKGKELIASYCKHKNIVLSELMKPDYTGVVLRKYGFKDWDSLLAAVGHGGLKESQVVNRLYEEHRKKNMLNITDENILEEVIGNKDYKLPTTKSKSGIVVKGIHDLAVRFSKCCSPVPGDEIIGFVTRGRGISIHRTDCINVINLPEDDRARLIDAEWDVNAGKQTGVYPAEIKIFANNRTGVLVDISRVLTENKIDVTSMNVRTSKQGTASISIGFEINGVEQLNEIIDKIRNVESVLDIERTAG
SIO_010081: SD1D_RS02455
subclass of: SO_0000673
so part of: SD1D_RS02455
location: 513522..515807
location: region:513522-515807:1
so has part: feature:513522-515807:1:exon

WP_058259170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513522-515807:1:exon

SD1D_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02460
old locus tag: SD1D_0496
so part of: sequence
location: 515839..516468
location: region:515839-516468:1
so has part: feature:515839-516468:1:exon
subclass of: SO_0000010

position:515839:1
position: 515839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516468:1
position: 516468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515839-516468:1:exon

SD1D_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02460
old locus tag: SD1D_0496
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015514687.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MRKIHIKTMVLGMLQTNCYIVSAPNSKEVVVIDPADNVNKIDQYLNENDLVCKMILLTHGHFDHITAANDLKLLTKAPICAHEDEADFLKDSNLNLSAHMGEEVMVEADILLKDGKEFQAGGLHWKVIYTPGHTKGGACYFLKEEKIIFSGDTLLYESIGRSDFPTGNHQRLIESIQSKLMTLSDDIEIYPGHGRPTTIGHEKSFNPYL
SIO_010081: SD1D_RS02460
subclass of: SO_0000673
so part of: SD1D_RS02460
location: 515839..516468
location: region:515839-516468:1
so has part: feature:515839-516468:1:exon

WP_058257452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515839-516468:1:exon

SD1D_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: hemZ
locus tag: SD1D_RS02465
old locus tag: SD1D_0497
so part of: sequence
location: 516493..517977
location: region:516493-517977:1
so has part: feature:516493-517977:1:exon
subclass of: SO_0000010

position:516493:1
position: 516493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517977:1
position: 517977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516493-517977:1:exon

SD1D_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: hemZ
locus tag: SD1D_RS02465
old locus tag: SD1D_0497
EC number: 1.3.98.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005602205.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: coproporphyrinogen dehydrogenase HemZ
translation: MIKIILSHKAYENDAYPIVKAFYPKEEILVKGSKDVIIEEGNLSKVHSCIQIDFGNDKIEIVITHNKDRKYKTITETPDPVKDKAAYKNAMKRQLYKMLSSISNIKLPWGILTGIRPVKLVYEMLDRGMDDSEIYNFMEREYLCSREKIDISIDIAKRERKLLHEIDYKKGYSIYIGIPFCPSTCLYCSFTSYSVERHADRITSYLNALEKEIKYGSTCFPDKKLTSVYLGGGTPTTLSAEQLDRLLGLIREQYDFTHVREFCVEAGRPDSISRKKLEVLKKWGVDRISINPQTMQQKTLDLIGRRHTVEQIEEAFYLARETGHENINMDIIIGLPNESPEDVIDTLNKIEKLNPESLTVHTLALKRAARLNTEKENYKNLQAVDVPRMMEATMEFAKKKGYLPYYLYRQKNMADNLENIGYAKEGKEGLYNILIMEEKQTILAFGAGAMSKFVFHDENRIERVENVKSLTDYISRIDEMIARKKEFLLKNPQL
SIO_010081: SD1D_RS02465
subclass of: SO_0000673
so part of: SD1D_RS02465
location: 516493..517977
location: region:516493-517977:1
so has part: feature:516493-517977:1:exon

WP_058257453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516493-517977:1:exon

SD1D_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: hisS
locus tag: SD1D_RS02470
old locus tag: SD1D_0498
so part of: sequence
location: 518071..519318
location: region:518071-519318:1
so has part: feature:518071-519318:1:exon
subclass of: SO_0000010

position:518071:1
position: 518071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519318:1
position: 519318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518071-519318:1:exon

SD1D_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: hisS
locus tag: SD1D_RS02470
old locus tag: SD1D_0498
EC number: 6.1.1.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198583.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine--tRNA ligase
translation: MITQRPKGTQDWYGSNMYKRTIIEEIARKICKAYHIKEIITPVFEHTILFQRGVGETTDVVQKEMYTFMDKGNRSITLKPEGTAGTVRAYLENSLYAESQPTKLFYITPAFRYENPQSGRLRQHHQFGVEFFGSASPLAEVELITLLMEFMKELGLKGVKLHINSIGCKNCRKEYNKALLEFLKRHEDKLCGTCKERMEKNPLRIIDCKVDGCKEIVKDAPRTIEYLDEECKDHFNDLQSLLNELNIPFEVDTGIVRGLDYYTKTVFEFVNGEGFTLCGGGRYDNLIHEIDGKQDIPAVGFGFGIERIINELETEKVELPKEPAVDLYVGILGKESKAAAYSLVRELRKEGFIIETDYMDRSVKAQMKYANKIGAKHTVIIGADELAAKKVNIKDMDRGEQFELSLDKISDFLKR
SIO_010081: SD1D_RS02470
subclass of: SO_0000673
so part of: SD1D_RS02470
location: 518071..519318
location: region:518071-519318:1
so has part: feature:518071-519318:1:exon

WP_058257454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518071-519318:1:exon

SD1D_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02475
old locus tag: SD1D_0499
so part of: sequence
location: complement(519512..520480)
location: region:519512-520480:-1
so has part: feature:519512-520480:-1:exon
subclass of: SO_0000010

position:519512:-1
position: 519512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520480:-1
position: 520480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519512-520480:-1:exon

SD1D_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02475
old locus tag: SD1D_0499
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010073620.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MTSQQIEYVLTLAEEKSFSKAAQKLYVTQPSLSQFIKNLEKELRVPIFDRSTSPIRLTPAGEAFVNAARKIKAIEDELNQQIADLTNLNTGDLRIGTSPFRASCLLPKSIAKFQELYPGITIHILEDITHNLEEAAMNGTIDLYLGTGNFDESSFYAEELAMEQLYLAVPPQSPINKGIESYQVSDHDIKTDSAKLHMTPAVDLSIFKSAPFIFLKQNQKLYSTSSEFCLSAGFNPYIILFSERLETAFSWVLAGIGCTFIPDFLIKFGNYHKHPIYYKLNHPKATRSLYIAYRKNRYLSRVSIEYIALLKKLIGHGTWYYK
SIO_010081: SD1D_RS02475
subclass of: SO_0000673
so part of: SD1D_RS02475
location: complement(519512..520480)
location: region:519512-520480:-1
so has part: feature:519512-520480:-1:exon

WP_058257455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519512-520480:-1:exon

SD1D_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02480
old locus tag: SD1D_0500
so part of: sequence
location: 520756..522195
location: region:520756-522195:1
so has part: feature:520756-522195:1:exon
subclass of: SO_0000010

position:520756:1
position: 520756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522195:1
position: 522195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520756-522195:1:exon

SD1D_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02480
old locus tag: SD1D_0500
inference: COORDINATES: protein motif:HMM:NF013697.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MKKIRKLGFIFTFVMIIALVLGACGRKEKDSSTKPTTVPTEEEQDDKEKDKGKDDEVQTAELPRDLGGIDIKVADWFTTNDTEPTTAREIDQEAYREDLQSTHNFTLVQESIGTWNEYQELFITSTMTNTSLADIYIMDPTFIPEPLKQGLLYPISDLPSFDPEDQLWNQSVIDFMTQNEKVYGFTEEEDSPGLGIFWNKRLFEEGGLDPDLLYDLQKMEGAWTWKKMEELANQLTIDKDSDGITDIYGITCWSVEFSKAAVFSNGSDYVKYNKKTGRYENNQMSDDFLEAIKFGVELYSKGYMQPEPEEAEQKWWVSAFAAGQAAMMVGEWYEHPSLQDMEDDWGFCFFPKGPGEKAKMQTMFVGNIRIIPSTLDEQRADDVMFAYKLWVSPPPGYEDEEEDYSYYYSKVRDARAVEETIIPMIQGQGKRSLLYQVPGLSFRWGGNMDGGGFDGISAVEIAQEASAQFDAIIKEFYGD
SIO_010081: SD1D_RS02480
subclass of: SO_0000673
so part of: SD1D_RS02480
location: 520756..522195
location: region:520756-522195:1
so has part: feature:520756-522195:1:exon

WP_058257456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520756-522195:1:exon

SD1D_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02485
old locus tag: SD1D_0501
so part of: sequence
location: 522311..522571
location: region:522311-522571:1
so has part: feature:522311-522571:1:exon
subclass of: SO_0000010

position:522311:1
position: 522311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522571:1
position: 522571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522311-522571:1:exon

SD1D_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02485
old locus tag: SD1D_0501
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMDYQKIMVSRSLISTGNNFRIKKAIKKARQGEDVTIAYLGGSITRRNDEQKDRGFADASFRYFKERFATSGNLTYINAYLRCSF
SIO_010081: SD1D_RS02485
subclass of: SO_0000673
so part of: SD1D_RS02485
location: 522311..522571
location: region:522311-522571:1
so has part: feature:522311-522571:1:exon

WP_058257457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522311-522571:1:exon

SD1D_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02490
old locus tag: SD1D_0502
so part of: sequence
location: 522576..522953
location: region:522576-522953:1
so has part: feature:522576-522953:1:exon
subclass of: SO_0000010

position:522576:1
position: 522576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522953:1
position: 522953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522576-522953:1:exon

SD1D_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02490
old locus tag: SD1D_0502
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLIDSTMLLPISMKGFKKANTIEEFPNGWVKDWDAEEVYFKFSLSFKNLFIIYKEANNKSEGSISISIDGKKAGIYSGYRIFGWNNPVAKLVYSEKIYKEHIIEITMIQGDEKKDFTILAFGYC
SIO_010081: SD1D_RS02490
subclass of: SO_0000673
so part of: SD1D_RS02490
location: 522576..522953
location: region:522576-522953:1
so has part: feature:522576-522953:1:exon

WP_157893085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522576-522953:1:exon

SD1D_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02495
old locus tag: SD1D_0503
so part of: sequence
location: 522970..524865
location: region:522970-524865:1
so has part: feature:522970-524865:1:exon
subclass of: SO_0000010

position:522970:1
position: 522970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524865:1
position: 524865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522970-524865:1:exon

SD1D_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02495
old locus tag: SD1D_0503
inference: COORDINATES: protein motif:HMM:NF015585.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sialate O-acetylesterase
translation: MENGKKKKIWLSPLISNGMVLQRDSKVKIWGRGVPRKELKLNFLDVEYKTVTNEDGSWSIELKDLKAGGPYTINISHEGEERIVEDVLVGDIWVLAGQSNMQIPVSRTLDLFEDEIKGANNPNIRQYTVPMVYNFKEPMDELCDGNWVPVTPDTVYDFSAIGYFFAKKIYDKYKIPIGLLFTAIGGTPAEAWMSEETLMGFDRFKEILDKCKDDAYVEDIINSETQANNNWHQELNKNDEGLNHKPDTWYMEEYDDTDWRKINLPASFRGTELEPIRGSIWLRKEIEIPKHLAGKEGKLFLGTLIDADETYINGVQVGNTGYLYPPRRYNIPKGLLKAGKNVITVRLIMTENIGGFVTDMPYFIKIENEQIPIAGTWKYKIGAITKAQNPTTFFQYKPTGVYNGMIYPLRNYSIRGILWYQGESNTGYPYDYKDLLEAVIMDWRKLWNLGDIPFYYVQLANYCPWRMEPEVSGWAQVREAQRQILELPNTGMAVTIDVGMYNDLHPWDKKSVGERLALWALNHVFGEDNVPSGPIYKSLSVEDNKIRLYFNYTGSGLTVKGNKLETFEISGTDGKFYPAEAEIEGDCVMVYSKKVSNPKWIRYAWADNPENANLYNNEGLPASPFIAQIDE
SIO_010081: SD1D_RS02495
subclass of: SO_0000673
so part of: SD1D_RS02495
location: 522970..524865
location: region:522970-524865:1
so has part: feature:522970-524865:1:exon

WP_197687598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522970-524865:1:exon

SD1D_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: aspS
locus tag: SD1D_RS02500
old locus tag: SD1D_0504
so part of: sequence
location: 525069..526862
location: region:525069-526862:1
so has part: feature:525069-526862:1:exon
subclass of: SO_0000010

position:525069:1
position: 525069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526862:1
position: 526862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525069-526862:1:exon

SD1D_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: aspS
locus tag: SD1D_RS02500
old locus tag: SD1D_0504
EC number: 6.1.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002569012.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate--tRNA ligase
translation: MAESMKGLRRSHRCTEVSNRNIGETVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESDVGSEGFAKAEHLRSEYVIAVRGRVEARSGAVNKNLLTGDIEIRANDIRILSEAETPPFPIEEDSKTKEELRLKYRYLDLRRPDLQRNLILRSRVANITRSFLTEEGFLEIETPTLTKSTPEGARDYLVPSRVHPGQFYALPQSPQLFKQLLMCAGYDRYFQIVKCYRDEDLRADRQPEFTQIDMELSFVDVDDVIEVNERLLKKMFKEAIGIDVELPIQRMTYKEAMDRFGSDKPDIRFGMELKDVSHIVKGCGFGVFTGAIENGGSVRGINAQGQATMPRKKIDAMVNFVKDYGAKGLAYLAINEDGSYKSSFAKFMTEDELASLVKAMEAKPGDLLFFAADKDDIVYAALGNLRLELAKNMDLINKDEYKFLWVTEFPLLEYSEEEQRYVAKHHPFTMPMEEDLHLLDTDPGKVRAKAYDIVLNGHEIGGGSVRIYQSDIQEKMFEVLGFTKEEAYERFGFLLNAFKFGVPPHAGLAYGLDRLIMLMAKEDNIRDVIAFPKVKDASCLMTEAPSIVDNKQLIELGIDVKNNTDI
SIO_010081: SD1D_RS02500
subclass of: SO_0000673
so part of: SD1D_RS02500
location: 525069..526862
location: region:525069-526862:1
so has part: feature:525069-526862:1:exon

WP_058257459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525069-526862:1:exon

SD1D_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02505
old locus tag: SD1D_0505
so part of: sequence
location: 526877..527167
location: region:526877-527167:1
so has part: feature:526877-527167:1:exon
subclass of: SO_0000010

position:526877:1
position: 526877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527167:1
position: 527167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526877-527167:1:exon

SD1D_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02505
old locus tag: SD1D_0505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009169522.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1294 domain-containing protein
translation: MNLNLNENLYTLVICYLLIINIVGFAAMGIDKKKSIKRGWRIPERTLILLAFAGGALGSFLGMYIFRHKTKHMKFVILLPLALLLHIFLFYLISRQ
SIO_010081: SD1D_RS02505
subclass of: SO_0000673
so part of: SD1D_RS02505
location: 526877..527167
location: region:526877-527167:1
so has part: feature:526877-527167:1:exon

WP_087758929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526877-527167:1:exon

SD1D_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02510
old locus tag: SD1D_0506
so part of: sequence
location: 527324..528886
location: region:527324-528886:1
so has part: feature:527324-528886:1:exon
subclass of: SO_0000010

position:527324:1
position: 527324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528886:1
position: 528886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527324-528886:1:exon

SD1D_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02510
old locus tag: SD1D_0506
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018597739.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015370 - solute:sodium symporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium/solute symporter
translation: MGIKLIFLICFFAIMIVVGVIASKHATNVGDFVLGGRKVGPWLTAFAYGTSYFSAVVFVGYAGQFGWRYGISATWIGIGNALIGSLLPWIVLGGRTRTMTKHLNSATMPDFFGRRFDSKAIKIAAAVISFIFLVPYTASVYNGLSRLFEMAFNIPYWVCVLGMASLTGLYVILGGYMATAINDLIQGIVMLVGIVAVIGTVLSQQGGFFSAVGKLAELKSDVPVTLGQSGAFTSFFGPDPINLLGVVILTSLGTWGLPQMVHKFYAIKDEKSIKTGTIISTIFAIIIAGGCYFLGSFGRLFDNPGLYNEQGKVIYDAIMPYILSSLSDVLIGIVVVLVLSASMSTLSALVLTSSSTITLDLIKDNLYKDMNQKKQLRIMRIFIVFFIVVSVVLALYPPDFIAQLMGISWGALAGAFLAPFMYGLYWKGTTKGAVWASFISGVGITTSNLVFGYIDSPINAGAIAMVAGLVIVPLVSILTPKMKKDKLEAIFKCYKSDNNLSKNELSEDKLKEEKQTKVMA
SIO_010081: SD1D_RS02510
subclass of: SO_0000673
so part of: SD1D_RS02510
location: 527324..528886
location: region:527324-528886:1
so has part: feature:527324-528886:1:exon

WP_058257461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527324-528886:1:exon

SD1D_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02515
old locus tag: SD1D_0507
so part of: sequence
location: 528927..530231
location: region:528927-530231:1
so has part: feature:528927-530231:1:exon
subclass of: SO_0000010

position:528927:1
position: 528927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530231:1
position: 530231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528927-530231:1:exon

SD1D_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02515
old locus tag: SD1D_0507
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004065921.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylacetate--CoA ligase
translation: MIWAKEETLPRQEIENIQLTRLKSTLKRIYDKIPAYRAKMDQQGISCKDIKNLDDLKLLPFTTKQDLRDNYPFGLFAVPKKELVRIHASSGTTGKPTVVGYTKKDLDIWTECVSRIACMGGASQEDIAQICFGYGMFTGALGLHYGLENIGAIVCPASSGNTQRQIMYMQDFGTTLLVATPSYALHIAEVANEMGIDPAKDLNVRIGLFGGEGMTEPMRSEMLRLWGSKMKATQNYGMSELIGPGVSGECLELCGMHINEDHFIPEVINPKTGEVLPPGEKGELVITCITKEALPIIRYRTGDITRLFYEPCKCGRTTVRMENISGRSDDMMIIRGVNVFPSQIEEVLLRVPEIGPHYEILVERKDYLDIMEIKVELADETLLDSYAKLGELEKRIKLSLRSVLGLDAIIKLVAPKSLKRFEGKARRVTDLRKM
SIO_010081: SD1D_RS02515
subclass of: SO_0000673
so part of: SD1D_RS02515
location: 528927..530231
location: region:528927-530231:1
so has part: feature:528927-530231:1:exon

WP_058257462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528927-530231:1:exon

SD1D_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: iorA
locus tag: SD1D_RS02520
old locus tag: SD1D_0508
so part of: sequence
location: 530290..532032
location: region:530290-532032:1
so has part: feature:530290-532032:1:exon
subclass of: SO_0000010

position:530290:1
position: 530290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532032:1
position: 532032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530290-532032:1:exon

SD1D_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: iorA
locus tag: SD1D_RS02520
old locus tag: SD1D_0508
EC number: 1.2.7.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018597736.1
GO function: GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: indolepyruvate ferredoxin oxidoreductase subunit alpha
translation: MSEKVLMLGNEAFARGAYEAGCKVSAAYPGTPSTEISENIVKYDEIYSEWSPNEKVALEVAIGASIVGVRALASMKHVGLNVAADPLFTASYIGVNGGLVIIVADDPGLYSSQNEQDTRAVARAAKIPVLEPSDSAEAKEFVKFAFDLSEKYDTPVIIRSTTRLSHSQGLVELQDRINIEDKPYVRDISKNVMMPGNAKGRHLVVESRELALIKDSCDFPVNIVEYNDTKIGVITSGIPYQYVKEALPEASVLKLGIVNPLPRKLIEEFASKVDTLYIVEELDPIIEEQVKSWGIKAIGKDILTVQGEYSANLLRRAIKGENISLLPAAEIPNRPPILCPGCPHRSVYSVLKKLKTHGAGDIGCYTLGAVAPLSVVDTTICMGASISSLHGIEKAKGKEYIKNWVAVIGDSTFLHTGINSLINMVYNKSTGTVMILDNSTTGMTGHQDHAATGRTLKGEATYSVDLKELCKAVGVPHVYVVNAFDIENLEKTVKEAVALDEVAVIIAQAPCALLDKSPITKQYVIDQEYCKKCGMCMKAGCPAITKSDKGEISINDTMCNGCGLCYSVCKFNAIKSVKLR
SIO_010081: SD1D_RS02520
subclass of: SO_0000673
so part of: SD1D_RS02520
location: 530290..532032
location: region:530290-532032:1
so has part: feature:530290-532032:1:exon

WP_173803192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530290-532032:1:exon

SD1D_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02525
old locus tag: SD1D_0509
so part of: sequence
location: 532043..532618
location: region:532043-532618:1
so has part: feature:532043-532618:1:exon
subclass of: SO_0000010

position:532043:1
position: 532043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532618:1
position: 532618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532043-532618:1:exon

SD1D_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02525
old locus tag: SD1D_0509
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201094.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: indolepyruvate oxidoreductase subunit beta
translation: METKNIMIVGVGGQGTLLTSRILGALTIQAGYDVKLSEVHGMAQRGGSVVTFVRYGKKVNEPIVEEGQADVLIAFEKLEALRYAHFLKKDGAIIVNDQQIDPMPVVIGAAKYPDNILEQLSKNHRIFKVDAIGEAKKLGNSRVFNVIVLGIAAQHMDFSKDEWLSVIEKTVPQKTIEINKKAFEIGYNLHN
SIO_010081: SD1D_RS02525
subclass of: SO_0000673
so part of: SD1D_RS02525
location: 532043..532618
location: region:532043-532618:1
so has part: feature:532043-532618:1:exon

WP_058257463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532043-532618:1:exon

SD1D_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02530
old locus tag: SD1D_0510
so part of: sequence
location: 532692..533117
location: region:532692-533117:1
so has part: feature:532692-533117:1:exon
subclass of: SO_0000010

position:532692:1
position: 532692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533117:1
position: 533117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532692-533117:1:exon

SD1D_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02530
old locus tag: SD1D_0510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004606940.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid-binding protein
translation: MIQQLSIIIQNKIGSVAKVTSILKNNNINLRAIASFDTPEFAILRMVVDQPEKTKTLLTDKGYAVTMSEAIAVELCDRPGVLHDLLQIIADADIGLNYIYSIVIRNSKVPLIILNTDNLEKTKAILEEKGYTVAGQEDVVL
SIO_010081: SD1D_RS02530
subclass of: SO_0000673
so part of: SD1D_RS02530
location: 532692..533117
location: region:532692-533117:1
so has part: feature:532692-533117:1:exon

WP_058257464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532692-533117:1:exon

SD1D_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02535
old locus tag: SD1D_0511
so part of: sequence
location: 533114..534412
location: region:533114-534412:1
so has part: feature:533114-534412:1:exon
subclass of: SO_0000010

position:533114:1
position: 533114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534412:1
position: 534412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533114-534412:1:exon

SD1D_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02535
old locus tag: SD1D_0511
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016290713.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylacetate--CoA ligase
translation: MIWNETKECMSRDEIYNLQSARLKKTVSRVYHNVEFYRKKMQELGLEPGDINGIEDINKLPFTTKDDLRDNYPFGLFAVPQSEVVRVHASSGTTGKATVVGYTRRDIEIWQECVTRVLAMAGVGKNDKLQVAYGYGLFTGGLGLHYGAENLGAMVIPMSTGNTQKLITMMEDFGATAIACTPSYLLHIAEVLEEAGKLDKIKLKAAICGAEPWTENMRKEIETKLKLKAYDIYGLSEILGPGVAADCDAHKGLHVYEDHFVPEIINPETLEPCKEGEVGELVFTTITKEALPLFRYRTKDLTSITYEPCECGRTIARISRFKGRSDDMLIIRGVNVFPSQVESALLEIGETSPHYIMIVDRVNNLDTLEIQVEVEERFFSDEIKELENLTRKISHVLQTALGLAVKVTLVEPKTIARSEGKAKRVIDKRKLI
SIO_010081: SD1D_RS02535
subclass of: SO_0000673
so part of: SD1D_RS02535
location: 533114..534412
location: region:533114-534412:1
so has part: feature:533114-534412:1:exon

WP_058257465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533114-534412:1:exon

SD1D_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02540
old locus tag: SD1D_0512
so part of: sequence
location: 534466..534912
location: region:534466-534912:1
so has part: feature:534466-534912:1:exon
subclass of: SO_0000010

position:534466:1
position: 534466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534912:1
position: 534912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534466-534912:1:exon

SD1D_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02540
old locus tag: SD1D_0512
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201090.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid-binding protein
translation: MLIKQLSVFIENKEGRLKDVTQVLRKHNINIASFSLADTAEYGMLRMIVSDPDKGRQVLKEEGFSVKLTDVIAVKISQQPGTLNEVLNIIFEAGLSIEYMYTLATTGRDTSIIMKASDLNCALEELKRNGYEVCSAKEAYEINNIANK
SIO_010081: SD1D_RS02540
subclass of: SO_0000673
so part of: SD1D_RS02540
location: 534466..534912
location: region:534466-534912:1
so has part: feature:534466-534912:1:exon

WP_058257466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534466-534912:1:exon

SD1D_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02545
old locus tag: SD1D_0513
so part of: sequence
location: 535002..535202
location: region:535002-535202:1
so has part: feature:535002-535202:1:exon
subclass of: SO_0000010

position:535002:1
position: 535002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535202:1
position: 535202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535002-535202:1:exon

SD1D_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02545
old locus tag: SD1D_0513
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009757358.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MNKGTVKWFNNQKGFGFISDEQGNDVFVHYTGLNMDGFKSLEEGQEVEFDVVQGAKGPQATNVTRI
SIO_010081: SD1D_RS02545
subclass of: SO_0000673
so part of: SD1D_RS02545
location: 535002..535202
location: region:535002-535202:1
so has part: feature:535002-535202:1:exon

WP_058257467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535002-535202:1:exon

SD1D_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02550
old locus tag: SD1D_0514
so part of: sequence
location: complement(535337..535846)
location: region:535337-535846:-1
so has part: feature:535337-535846:-1:exon
subclass of: SO_0000010

position:535337:-1
position: 535337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535846:-1
position: 535846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535337-535846:-1:exon

SD1D_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02550
old locus tag: SD1D_0514
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016439692.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFSLKTRDIAIIGIMSAILITVQVAFAFLPNIELVSLIIIISTLVFKWKTLYIIYIFVLVEGLIYGFTTYWICYLYVWTILMFFTILFKKNRSPFFWAILSGTFGLSFGLLCSIPYLFIGGVPLAISTFIVGIPFDIAHCIGNYVIALTLFKPLYNLLNWTKKNLLTQ
SIO_010081: SD1D_RS02550
subclass of: SO_0000673
so part of: SD1D_RS02550
location: complement(535337..535846)
location: region:535337-535846:-1
so has part: feature:535337-535846:-1:exon

WP_058257468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535337-535846:-1:exon

SD1D_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02555
old locus tag: SD1D_0515
so part of: sequence
location: complement(535848..536252)
location: region:535848-536252:-1
so has part: feature:535848-536252:-1:exon
subclass of: SO_0000010

position:535848:-1
position: 535848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536252:-1
position: 536252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535848-536252:-1:exon

SD1D_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02555
old locus tag: SD1D_0515
inference: COORDINATES: protein motif:HMM:NF025833.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4430 domain-containing protein
translation: MREAKYWIKVLLATLGLFVLTILLLYLYTSRSNPASPGHKEITIKVIIPDEEPQEFAISTDALTLRQALEEKELIKGSESSYGFYITEVNGRRANEQKQEWWCITKGGENVNIGIDLINIQDKDTYELTLMEGY
SIO_010081: SD1D_RS02555
subclass of: SO_0000673
so part of: SD1D_RS02555
location: complement(535848..536252)
location: region:535848-536252:-1
so has part: feature:535848-536252:-1:exon

WP_058257469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535848-536252:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1679721
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.4
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: complement(536389..536594)
location: region:536389-536594:-1
so has part: feature:536389-536594:-1:region

position:536389:-1
position: 536389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536594:-1
position: 536594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536389-536594:-1:region

SD1D_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02560
old locus tag: SD1D_0516
so part of: sequence
location: 536919..537977
location: region:536919-537977:1
so has part: feature:536919-537977:1:exon
subclass of: SO_0000010

position:536919:1
position: 536919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537977:1
position: 537977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536919-537977:1:exon

SD1D_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02560
old locus tag: SD1D_0516
EC number: 5.1.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004617403.1
GO function: GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldose epimerase family protein
translation: MNITQKPFGKTKTGEEATLYTITNSNGMKVSFTDFGANIVSIIVPDKKGNFADIALGFDNLEGYESNGPGFGSLIGRCANRISGAKFELNGKIYELEKNEGENNLHGGKPAYNMVMYETEIFEDEDMISIEFSRLSPDMEQGFPGNFDYTVTYSLTEANELVIEYHGVSDKDTVVNLTNHSYFNLSGHNSGDILNHKVWINANQFTPTRDDLIPTGEYLDVEGTPMDFRSLKSIGQDIDSDFGPLKQAGGYDHNYVLNINGDEVEKVAKLVEESSGRVMEVYTNKPGLQFYTSNMLSPVKNGKDGASYQKRAGVCFETQYFPNACNIETFPSSVLKAGEEYEFVTIYKFLCE
SIO_010081: SD1D_RS02560
subclass of: SO_0000673
so part of: SD1D_RS02560
location: 536919..537977
location: region:536919-537977:1
so has part: feature:536919-537977:1:exon

WP_058257470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536919-537977:1:exon

SD1D_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: upp
locus tag: SD1D_RS02565
old locus tag: SD1D_0517
so part of: sequence
location: complement(538044..538673)
location: region:538044-538673:-1
so has part: feature:538044-538673:-1:exon
subclass of: SO_0000010

position:538044:-1
position: 538044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538673:-1
position: 538673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538044-538673:-1:exon

SD1D_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: upp
locus tag: SD1D_RS02565
old locus tag: SD1D_0517
EC number: 2.4.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012741040.1
GO function: GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil phosphoribosyltransferase
translation: MAAVVIMDHPLIQHKIGIMRRKDTSTKEFRDLVSEVAMLICYEATRNLPLKDVEIETPLTKTVVKEIEGKKLCIAPILRAGLHMADGILNLIPNAKVGHIGLYRNEETLEPVEYFCKLPSDAAKREIFVVDPMLATGGSAVAAIDLLKKRGISKIHFLCLIAAPEGVERLQNAHPDVNIFIGNLDERLNDLGYILPGLGDAGDRIYGTK
SIO_010081: SD1D_RS02565
subclass of: SO_0000673
so part of: SD1D_RS02565
location: complement(538044..538673)
location: region:538044-538673:-1
so has part: feature:538044-538673:-1:exon

WP_058257471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538044-538673:-1:exon

SD1D_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02570
old locus tag: SD1D_0518
so part of: sequence
location: 539284..540645
location: region:539284-540645:1
so has part: feature:539284-540645:1:exon
subclass of: SO_0000010

position:539284:1
position: 539284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540645:1
position: 540645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539284-540645:1:exon

SD1D_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02570
old locus tag: SD1D_0518
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003019729.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase
translation: MFKNLVELQKKFYQSGKTRSYKFRMKALSRLKEAIIANEASLYKALEQDLNKSKAEAYLCEIGIVLDEIRYHQKQLHGWMKKQIVKPSIGQMPGTCYRLPEPYGVTLIMAPWNYPVNLCFLPLIGAISGGNTAILKPSSYAPATAKVIKKIIKEAFPPYYISVILGGRRENTLLLKEKFDYIFFTGSPQVGKVVMEAAAKNLTALTLELGGKSPVIVDQTANISLAAKRIAFGKVINAGQTCVAPDYLLIHKEVKDKFIAEYKNALEKFFPNNNMSQMVKIISDKHYNRLKGLLTEGRIVLGGRYDDEKGHIEPTLIDQVSLTSTIMSEEIFGPILPIITYEKLEECIEIIRSFHKPLALYIFSENNKNINRVLKTCSFGGGCINDTILHLANPRLPFGGVGYSGMGSYHGKKSFDTFTHYRSIFRQSTKFDIPLRYMPYSDLKLKLLKKVLR
SIO_010081: SD1D_RS02570
subclass of: SO_0000673
so part of: SD1D_RS02570
location: 539284..540645
location: region:539284-540645:1
so has part: feature:539284-540645:1:exon

WP_058257472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539284-540645:1:exon

SD1D_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02575
old locus tag: SD1D_0519
so part of: sequence
location: 540953..541423
location: region:540953-541423:1
so has part: feature:540953-541423:1:exon
subclass of: SO_0000010

position:540953:1
position: 540953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541423:1
position: 541423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540953-541423:1:exon

SD1D_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02575
old locus tag: SD1D_0519
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANVFRKLIRKELGDINYHRYSCYLRKNISNNTDNKVPDNQVIFNDMYEKLKNRDFKSIYKMHNRLNDTMLLAFRISKNFFFAFLFYLLATVYLLLRSMSPELTAISIILINICFVYKIYEFISNKFCYIDAQLILLYKAVLDRIILNEQKSMREK
SIO_010081: SD1D_RS02575
subclass of: SO_0000673
so part of: SD1D_RS02575
location: 540953..541423
location: region:540953-541423:1
so has part: feature:540953-541423:1:exon

WP_058257473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540953-541423:1:exon

SD1D_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02580
old locus tag: SD1D_0520
so part of: sequence
location: 541534..542325
location: region:541534-542325:1
so has part: feature:541534-542325:1:exon
subclass of: SO_0000010

position:541534:1
position: 541534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542325:1
position: 542325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541534-542325:1:exon

SD1D_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02580
old locus tag: SD1D_0520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198632.1
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MDNKNENNPVSDITLFVKIGIVVLTVMAVVGLGVKFLPNAITVSNIGRKRDLPIYSVETDENKLALTFDTAWGFEDTEKILEILEKHDVKATFFMTGEWIGKNPEAVKKIAAAGHDLGNHSENHKQMTRLSEEQCKDEIMKVHKRIKKLTGVDMDLFRPPYGEYNNMLVQAARDCGYYTIQWNVDSKDWKDYGPDSIVKKCVENKNLGKGSIILLHNGAKYTPEALEGVILGLKEKGYELVPISQLIYKGEYRIDQTGRQYKK
SIO_010081: SD1D_RS02580
subclass of: SO_0000673
so part of: SD1D_RS02580
location: 541534..542325
location: region:541534-542325:1
so has part: feature:541534-542325:1:exon

WP_058257474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541534-542325:1:exon

SD1D_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: acpS
locus tag: SD1D_RS02585
old locus tag: SD1D_0521
so part of: sequence
location: 542591..542974
location: region:542591-542974:1
so has part: feature:542591-542974:1:exon
subclass of: SO_0000010

position:542591:1
position: 542591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542974:1
position: 542974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542591-542974:1:exon

SD1D_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: acpS
locus tag: SD1D_RS02585
old locus tag: SD1D_0521
EC number: 2.7.8.7
inference: COORDINATES: protein motif:HMM:TIGR00516.1
GO function: GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0008610 - lipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: holo-ACP synthase
translation: MIYGIGVDMVDISEFENLVKKLGKCFIEATFTKKEVELSVQHPEPIRFLAERFAVKEAVFKAIAHHTKAKTFDFRIVETLDDEARKPYVSINDSFKLIVEEAGICSIMVSLAKEKDYTIAFVIAQGA
SIO_010081: SD1D_RS02585
subclass of: SO_0000673
so part of: SD1D_RS02585
location: 542591..542974
location: region:542591-542974:1
so has part: feature:542591-542974:1:exon

WP_058257475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542591-542974:1:exon

SD1D_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02590
old locus tag: SD1D_0522
so part of: sequence
location: 543069..543761
location: region:543069-543761:1
so has part: feature:543069-543761:1:exon
subclass of: SO_0000010

position:543069:1
position: 543069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543761:1
position: 543761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543069-543761:1:exon

SD1D_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02590
old locus tag: SD1D_0522
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKIKRSISMYSLQDQYARGKMNLEDIFQYLNELNAGMELISDQMIKGAPEPSGEVLAEWDRLVSIYKPTLVCNDVFINTCLYKNRTLTLKESTDLLIKEIKLTRRLGFPMLRLVSKTPAGIIEPALPYAIENNVILTLEIHAGMSFDNPLTQEYINVMKKLNSPYVGLTVDAGIFCKRHPRVSSNYFRELGANEEVIQYIDQIFARGTDPRRYFAKYAAEGNDPRTFEI
SIO_010081: SD1D_RS02590
subclass of: SO_0000673
so part of: SD1D_RS02590
location: 543069..543761
location: region:543069-543761:1
so has part: feature:543069-543761:1:exon

WP_058257476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543069-543761:1:exon

SD1D_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02595
old locus tag: SD1D_0523
so part of: sequence
location: 543902..544507
location: region:543902-544507:1
so has part: feature:543902-544507:1:exon
subclass of: SO_0000010

position:543902:1
position: 543902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544507:1
position: 544507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543902-544507:1:exon

SD1D_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02595
old locus tag: SD1D_0523
inference: COORDINATES: protein motif:HMM:NF014069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing phosphohydrolase
translation: MIASHLHHFKIINLVRTGLLHDIGKAKIKDSLLNKAEVLTFEEMEMMKSHSVISYKILNSINDLDAELKQGILFHHERMDGSGYPLGLKGDKINLISKIIAIADIFDASTARKPYSKKKTPLQALEEIKSSSFNSLDTFICQVFANNMLKFYNGRAVKLSNEQVACMVHINPIEIGKPLVRCGDEYYDLSVEEDIEIIEVL
SIO_010081: SD1D_RS02595
subclass of: SO_0000673
so part of: SD1D_RS02595
location: 543902..544507
location: region:543902-544507:1
so has part: feature:543902-544507:1:exon

WP_242955263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543902-544507:1:exon

SD1D_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02600
old locus tag: SD1D_0524
so part of: sequence
location: 544811..546724
location: region:544811-546724:1
so has part: feature:544811-546724:1:exon
subclass of: SO_0000010

position:544811:1
position: 544811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546724:1
position: 546724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544811-546724:1:exon

SD1D_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02600
old locus tag: SD1D_0524
inference: COORDINATES: protein motif:HMM:NF024637.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc ribbon domain-containing protein
translation: MKRYLKRCLTIITILLVIIFATSCGNGAKISTGLILENNFIGRRVMDVSISKSDFNRYMQGPNHILENFINEKCPPELTWELHETEADYVARFTLEFDTKETYIRKVTNLLGTSPVVDMVQADSFLAKGIAYSENFTSKDLLSWLSNALVEEGYIDPSYKDEIFENDTTILYFGADEYPTSETINVSEITYLPFNSIDILTIPYVDGTYDRKVIFNIPKSTMEEKRNEIKAFMEDSIPSGALSLWETNPKSGDIVFSISLENTDKENIDAAMEKIFHSQAADFIDKKANNEGNMLEFNQTMTETLDLTKYISSRDGTASLRYFVASDVLSKAAILQDDGNTKDLSLWLDEDAYDGYIMAYSGDVSTITLNMEITYSYFPKEINIETVVKGNNYIQRTIEMLYDKQFEEKELTALKESINSIADRYALVDYKKTSSNYIIKFKQKGTKDEVSTGFGKIFADGNSAIEYDKDKKRFALHTITDFQEEISFGNFFGSASKNILVNYSVKLPAGDKISNDTIKNYADDDTVKIGEEEFKLSSYDKYILCKIKAESFNWVAILWWLLIILIVAVCLTAGYMGYVLLKEKLGDTDILANNKTNKANKIEKNIDIGNTIRFCTKCGEPIKKDNNFCTQCGNKIR
SIO_010081: SD1D_RS02600
subclass of: SO_0000673
so part of: SD1D_RS02600
location: 544811..546724
location: region:544811-546724:1
so has part: feature:544811-546724:1:exon

WP_058257478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544811-546724:1:exon

SD1D_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: hpt
locus tag: SD1D_RS02605
old locus tag: SD1D_0525
so part of: sequence
location: 546946..547485
location: region:546946-547485:1
so has part: feature:546946-547485:1:exon
subclass of: SO_0000010

position:546946:1
position: 546946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547485:1
position: 547485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546946-547485:1:exon

SD1D_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: hpt
locus tag: SD1D_RS02605
old locus tag: SD1D_0525
EC number: 2.4.2.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012159210.1
GO process: GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypoxanthine phosphoribosyltransferase
translation: MFQDVEKILFDEAVLAKRIGELGEEISKDFANEEVMLVGILKGASVFMSDLIRKISIPAYIDYMVVSSYGNSAETSGVVRIIKDLEDNIEGKNIIIVEDIIDTGLTLAYLKKNLLNRNPKSLKICTLLDKPSRRQKEIAIDYKGFEVPDEFIIGYGIDYAEKYRNLPFVGVLKREVYEK
SIO_010081: SD1D_RS02605
subclass of: SO_0000673
so part of: SD1D_RS02605
location: 546946..547485
location: region:546946-547485:1
so has part: feature:546946-547485:1:exon

WP_058257479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546946-547485:1:exon

SD1D_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02615
old locus tag: SD1D_0527
so part of: sequence
location: 548001..548510
location: region:548001-548510:1
so has part: feature:548001-548510:1:exon
subclass of: SO_0000010

position:548001:1
position: 548001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548510:1
position: 548510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548001-548510:1:exon

SD1D_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02615
old locus tag: SD1D_0527
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCLLGMDIEEQRPVYDIEVISGDINNFRENDIIVSEDFAKKHGLGIGSKFYVYYGDKKESLNVKAIGAKEGFFENTIGVTKKDILKIGVFEGLTISLYSSLCGMIYQRLILSIVTDILSFYVGKIDVAITYKSIIAMFLISSMLIISVLIGVIKKYVLKVNLIERVISY
SIO_010081: SD1D_RS02615
subclass of: SO_0000673
so part of: SD1D_RS02615
location: 548001..548510
location: region:548001-548510:1
so has part: feature:548001-548510:1:exon

WP_058257481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548001-548510:1:exon

SD1D_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02620
old locus tag: SD1D_0528
so part of: sequence
location: 548537..548878
location: region:548537-548878:1
so has part: feature:548537-548878:1:exon
subclass of: SO_0000010

position:548537:1
position: 548537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548878:1
position: 548878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548537-548878:1:exon

SD1D_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02620
old locus tag: SD1D_0528
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MAQDLNKVYNNNIKNHVIKDINLTVEKGEYIVITGKSGSGKTTLLYLLSGLEVPTSGKVLFHDISLGDLKDKEISYLRRSKLGFIFQFYNLVKNLNVRDNIFLPIEYSKKMRD
SIO_010081: SD1D_RS02620
subclass of: SO_0000673
so part of: SD1D_RS02620
location: 548537..548878
location: region:548537-548878:1
so has part: feature:548537-548878:1:exon

WP_278319662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548537-548878:1:exon

SD1D_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02630
old locus tag: SD1D_0529
so part of: sequence
location: 549163..549525
location: region:549163-549525:1
so has part: feature:549163-549525:1:exon
subclass of: SO_0000010

position:549163:1
position: 549163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549525:1
position: 549525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549163-549525:1:exon

SD1D_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02630
old locus tag: SD1D_0529
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIILIGVLIVSMIALTACEQSTEDWPTADEMLNNLQKAGYVITEGDKVQVGAVKHKGYVIIAEKDSEFVAGFWGEDYSSAKEVFNYWDRYQTKFKILVDNTVYCGTKEAIKHAGIDLK
SIO_010081: SD1D_RS02630
subclass of: SO_0000673
so part of: SD1D_RS02630
location: 549163..549525
location: region:549163-549525:1
so has part: feature:549163-549525:1:exon

WP_058257483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549163-549525:1:exon

SD1D_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02635
old locus tag: SD1D_0530
so part of: sequence
location: 549646..550173
location: region:549646-550173:1
so has part: feature:549646-550173:1:exon
subclass of: SO_0000010

position:549646:1
position: 549646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550173:1
position: 550173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549646-550173:1:exon

SD1D_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02635
old locus tag: SD1D_0530
EC number: 3.1.3.-
inference: COORDINATES: protein motif:HMM:NF012521.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine phosphatase family protein
translation: MKLLVTRHGETEWNRKNMILGRTDITLNETGIMQAKKLRDNIPYPIKYVIASPLQRAAMTANIVCENLNVEIKYDDRLMEMDFGTFEGRDRTCEVYQMEKRNFFTRYPQGESYFQVAQRVYNCLDEIIEKYSDGNVLIITHNGICRVIRTYFDNISNEEFAQYSLKNCELEVYHI
SIO_010081: SD1D_RS02635
subclass of: SO_0000673
so part of: SD1D_RS02635
location: 549646..550173
location: region:549646-550173:1
so has part: feature:549646-550173:1:exon

WP_058257484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549646-550173:1:exon

SD1D_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02640
old locus tag: SD1D_0531
so part of: sequence
location: 550341..552896
location: region:550341-552896:1
so has part: feature:550341-552896:1:exon
subclass of: SO_0000010

position:550341:1
position: 550341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552896:1
position: 552896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550341-552896:1:exon

SD1D_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02640
old locus tag: SD1D_0531
inference: COORDINATES: protein motif:HMM:TIGR01587.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated helicase/endonuclease Cas3
translation: MFFDVLARKEENELGEVKSQSLTEHLLSVGKIASQIGDLIGIKHLMMHVGLLHDMGKADRNFQTYLNGSSNKKVDHSSAGAKLWIHILSDTKEYEEYYNTVKFQYYKEIILYLIQSHHGLFDVIDTINIKNKSFERLKYDSKVTYHFNDDVLNYYNYFNNYLIQNENYSMDELIWRGFEEFNVIFNKLKQMAKSNPLAESKKVYLHEFNYYISCFVRLCLSILKEADIYDSANVFEAEKQKVWNQEELQSIWNEAYSKIEMIYRDYENVDKPSELNYTRTEMSKVAKQFASNYKEGIFQLEMPTGAGKTKTSLRYALTNAKNYNRKRIFYITAFLSVLEQNANEIKNIISNDTIVLEHHSNILLEERKDDEQFKYDVEHRMLSYLKESWEAPIILTTMVQFCNTLFKGQASQIRRFCKLIDSVIIIDEVQSLPLKAIYNFNLMMNFMKNIMHCNIVHCTATQPILNSKALKYPVYYGDLNNNNFKIIEKKLIKRTCFDRVVYYNLTGSDARKKMSTYDIIQHVEKTLRDFDSCLIVLNTKKAVRTLYDEFSNQMTNEKIVYLTTNLCAAHRLEIIDEVKQILIKNRNGNSKTKLICISTQLIEAGVDLDFDCVYRSMAGIDSLVQCAGRCNREGKLTKDGQYIQGKIYIINYDMENLANLQDIRQTVTASEEAIRSISIANDEEQISLDEIKSYYFNKYYIENEKKMSYCQRKDGDNMIEQLSINKSMRIAYEQYHYTKYPFRLAQAFREAADNFELIKHDTVGVIVYYKNEDLIEQLLIAIEKRDSYEISKLLKKLQRTTVNVYFNEKLQGYVQNIIKDKVKDGQIWLLDKHYYDEKLGIVTEGLADFIV
SIO_010081: SD1D_RS02640
subclass of: SO_0000673
so part of: SD1D_RS02640
location: 550341..552896
location: region:550341-552896:1
so has part: feature:550341-552896:1:exon

WP_058257485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550341-552896:1:exon

SD1D_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: cas5c
locus tag: SD1D_RS02645
old locus tag: SD1D_0532
so part of: sequence
location: 552910..553653
location: region:552910-553653:1
so has part: feature:552910-553653:1:exon
subclass of: SO_0000010

position:552910:1
position: 552910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553653:1
position: 553653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552910-553653:1:exon

SD1D_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: cas5c
locus tag: SD1D_RS02645
old locus tag: SD1D_0532
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016323949.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated protein Cas5c
translation: MSEKFRSSPFYYRLFGDYALFTDPVTKGGGEKFTYQIPTYQALKGITEQIYWKPTIQYYVDAVKVLQPIQTETKGVVAFLKNGKKDLNYYTYLKNVDYLVKVHFEWNELRHELAYDRNEKKHEQIFLRSLERGGRRDIFLGARECFGYVEKINENEFINAITPFEGKQISFGIMFHSFVYPDEAYNEDTANNLTSNFTNIAMNNGIINFIRPEECEIQQQLRNYSIKMFDSDSMKDVGEEWEEVMNQ
SIO_010081: SD1D_RS02645
subclass of: SO_0000673
so part of: SD1D_RS02645
location: 552910..553653
location: region:552910-553653:1
so has part: feature:552910-553653:1:exon

WP_058257486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552910-553653:1:exon

SD1D_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: cas8c
locus tag: SD1D_RS02650
old locus tag: SD1D_0533
so part of: sequence
location: 553650..555620
location: region:553650-555620:1
so has part: feature:553650-555620:1:exon
subclass of: SO_0000010

position:553650:1
position: 553650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555620:1
position: 555620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553650-555620:1:exon

SD1D_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: cas8c
locus tag: SD1D_RS02650
old locus tag: SD1D_0533
inference: COORDINATES: protein motif:HMM:TIGR01863.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated protein Cas8c/Csd1
translation: MSGLKVLYDTYNIALDANLVDRSENIEEETILLPLYHSNKKSDGKDIIQITLSTKGEFIKADWVPKDKYIIFPVTERSIARSNGYAPHPLCDELSYLTKEINSEKHKLYIKEIKSWKDYMVQGNINITFEAIYNYIIKETILDDVIKEIFGVNDYSIDDKNVVHYMDENQKVKEWKPEKIFITFLIEHRDAFHKNLSVTTDRQLHNNYISYVRSLNMDNDKKYCNISKEFTYCVKSHRGIMGNAKLISISNNKETYYGRFSTGDEVISIGYETSQKIHLMLKYFLENKNNSRWIGENSYLINWFSDDISNSNGLQLTGGITTYDDEDLDLEEYEDESISLGGNTSKNLNNYLTGRDRFIPPESKFYVMIIDKISNGRVSIKYFRELYRSDLYKRVEAWYHSTKWGFYSARQKEIVQQSPSIYTIADYILGTETEEKNRTTVVCNNKKMRVKTIERLIPCIIDGKKIPLDLVNRMFNNLCKRSSYGKTWSSIVQVGCSLLKKYKLDYKLKDEVKEMLEENNKDRSYLYGRLLAIYEKLEADTLYSGTNEVGNRSTNAERLWTAYTKTPARTLMILEEKIRPYKERLQKGKPSSYIYYERLIGKIINDLSGNENFDNEKNNPLNEDFVFGYYAQKQDLYKKKSEDKKDEVLENMKEVY
SIO_010081: SD1D_RS02650
subclass of: SO_0000673
so part of: SD1D_RS02650
location: 553650..555620
location: region:553650-555620:1
so has part: feature:553650-555620:1:exon

WP_058257487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553650-555620:1:exon

SD1D_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: cas7c
locus tag: SD1D_RS02655
old locus tag: SD1D_0534
so part of: sequence
location: 555620..556480
location: region:555620-556480:1
so has part: feature:555620-556480:1:exon
subclass of: SO_0000010

position:556480:1
position: 556480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555620-556480:1:exon

SD1D_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: cas7c
locus tag: SD1D_RS02655
old locus tag: SD1D_0534
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019214125.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated protein Cas7/Csd2
translation: MGKLENKIDFVMFFTVDHANPNGDPLNGNMPRNDYDGFGEISDVCIKRKIRNRLQDAGEKIFVQSNDRIEDDLKSLEARFNNVFKKGKDDDETVFTQSCELWIDVRSFGQVVTFQNRSIGIRGPVSISMAKSLSPVNIISMQITRSTNGMIKAEGGKSSDTMGTKHYVDFGVYKIKGSINPYFAEKTGFTIEDAEKIKEALRTLFVNDASSARPEGSMEVKSIYWFTHPGKLGVASSAKIHNLVKDQLKEGVIKPTTYDDYVIKLNEIELSKYKEKGLKVEVIEGI
SIO_010081: SD1D_RS02655
subclass of: SO_0000673
so part of: SD1D_RS02655
location: 555620..556480
location: region:555620-556480:1
so has part: feature:555620-556480:1:exon

WP_058257488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555620-556480:1:exon

SD1D_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: cas4
locus tag: SD1D_RS02660
old locus tag: SD1D_0535
so part of: sequence
location: 556467..557126
location: region:556467-557126:1
so has part: feature:556467-557126:1:exon
subclass of: SO_0000010

position:556467:1
position: 556467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557126:1
position: 557126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556467-557126:1:exon

SD1D_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: cas4
locus tag: SD1D_RS02660
old locus tag: SD1D_0535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012062881.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated protein Cas4
translation: MKEYKEDDYLLISGIQHFIFCKRQWALIHVEQQWEENFFTMDGILLHERADDGSIKESRKDLVTIHALPVKSKSLCVTGKCDVVELRLSSEGIYLPKYNNTYKVYPVEYKRGKPKEDESDILQLLAQAICLEEMLMTKIEKAYMFYFEIRRRQEVIFTEAMRKRLYDIVTEMHYYMDKGITPKVRTGKKCRTCSLNNICMPGLNEEKNVTLYIQRRINE
SIO_010081: SD1D_RS02660
subclass of: SO_0000673
so part of: SD1D_RS02660
location: 556467..557126
location: region:556467-557126:1
so has part: feature:556467-557126:1:exon

WP_058257489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556467-557126:1:exon

SD1D_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: cas1c
locus tag: SD1D_RS02665
old locus tag: SD1D_0536
so part of: sequence
location: 557123..558154
location: region:557123-558154:1
so has part: feature:557123-558154:1:exon
subclass of: SO_0000010

position:557123:1
position: 557123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558154:1
position: 558154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557123-558154:1:exon

SD1D_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: cas1c
locus tag: SD1D_RS02665
old locus tag: SD1D_0536
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002568435.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-C CRISPR-associated endonuclease Cas1c
translation: MRQLLNTLYITRPNAYLSLNGENIVIKEDNQTIGRYPLHNIESIVLFSNLGMSPQLMGKCVDNHISICFLTPNGRFRARVVGRSYGNVLLRKKQYKVSMDDAECVKISINFILGKIYNQKWLIERYIREYPLRIQGELLKNISYQLTEYMNCVKTCTELDSLRGFEGKAQVCYFQGFNELILNQKKEFVFNGRNKRPPQDPVNSLLSFAYTLLSNDIASALETVGLDSYVGFMHQDRPGRISLALDLIEELRAPIADRFVLSLINRQQVKFEDFIINDNGAVLIKDEARKKILSEWQKRKQEKLKHPFLDEKIPWGLVPYAQSMLLARYLRGDLNEYPPFFWK
SIO_010081: SD1D_RS02665
subclass of: SO_0000673
so part of: SD1D_RS02665
location: 557123..558154
location: region:557123-558154:1
so has part: feature:557123-558154:1:exon

WP_058257490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557123-558154:1:exon

SD1D_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: cas2
locus tag: SD1D_RS02670
old locus tag: SD1D_0537
so part of: sequence
location: 558166..558456
location: region:558166-558456:1
so has part: feature:558166-558456:1:exon
subclass of: SO_0000010

position:558166:1
position: 558166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558456:1
position: 558456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558166-558456:1:exon

SD1D_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: cas2
locus tag: SD1D_RS02670
old locus tag: SD1D_0537
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004617482.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas2
translation: MYILITYDINTTSLNGQARLRKVAKVCINYGQRVQNSVFECKVNEAQYRELQHKLLKIIDKNVDSLRFYRLGENYDKKVKHIGAKQTYKVDDPMIL
SIO_010081: SD1D_RS02670
subclass of: SO_0000673
so part of: SD1D_RS02670
location: 558166..558456
location: region:558166-558456:1
so has part: feature:558166-558456:1:exon

WP_058259173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558166-558456:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 1679721
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 558615..558646
rpt unit seq: gtcgcaccctttacgggtgcgtggattgaaat
so part of: sequence
location: 558615..563346
location: region:558615-563346:1
so has part: feature:558615-563346:1:region

position:558615:1
position: 558615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563346:1
position: 563346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558615-563346:1:region

SD1D_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02675
old locus tag: SD1D_0538
so part of: sequence
location: complement(563408..564817)
location: region:563408-564817:-1
so has part: feature:563408-564817:-1:exon
subclass of: SO_0000010

position:563408:-1
position: 563408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564817:-1
position: 564817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563408-564817:-1:exon

SD1D_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02675
old locus tag: SD1D_0538
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016110102.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PQQ-dependent sugar dehydrogenase
translation: MDRLSLGLQPIVHNLNLPTVIKTTIFPGDQEETLMIATQVGEIFYIRNNTIGTFLDIRQNILQLGTNGGYDERGLLGLAFHPNFRYNGLFYLHYSLADSEGPGALPGGFSPNPCDENTLNLRWTDRENRYDHIDTVEEWMLQNEGQPIKRRTLLNIRRPFANHNGVNSLNFSPETGRLVLTIGDGGLGYDPFNLAQTDNEIAGKIIEIDVDMDLFIDNMPVVTRFSELSLQVLESLTVIAKGVRNIPGISYQFFNDRYIKYVGNVGQDLVESIFAFIYYRPVPATDIVKSYIMNSSSNQEGFINLGWRGWEGDLPTSLIRPCDSNLNQKIIAYYNEAITISTKRIYPLCCYYHQDPRVDKFQGRALTGVQAYMGNEIPSLMGSCVFTDFARRTNTVSPPRGVLAYTWFTPECQMNEYYMIDIDYDFGNEAAFFTCLGSNINQTKLYLGVYGSANVTDLNRGSVYEIVKL
SIO_010081: SD1D_RS02675
subclass of: SO_0000673
so part of: SD1D_RS02675
location: complement(563408..564817)
location: region:563408-564817:-1
so has part: feature:563408-564817:-1:exon

WP_058259174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:563408-564817:-1:exon

SD1D_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: vanR
locus tag: SD1D_RS02680
old locus tag: SD1D_0539
so part of: sequence
location: 565097..565798
location: region:565097-565798:1
so has part: feature:565097-565798:1:exon
subclass of: SO_0000010

position:565097:1
position: 565097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565798:1
position: 565798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565097-565798:1:exon

SD1D_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: vanR
locus tag: SD1D_RS02680
old locus tag: SD1D_0539
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004853366.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VanR-ABDEGLN family response regulator transcription factor
translation: MSESILIVDDEKEIADLVELYLKNEGYQVYKFYSGYEALECIKNNKLDLAILDVMLPDIDGFRICQKIREHYFFPIIMLTAKVEDMDKIMGLTLGADDYITKPFNPLEVVARVKTQLRRYMRYNQSEGGSDLPLNNEFDFKGLVINKDTHNCTLYGKPLNLTPIEFSILWYLCEKRGKVVSSEELFEAVWGEKFLNNNNTVMAHIGRLREKMNDSYKNPKFIKTVWGVGYQIE
SIO_010081: SD1D_RS02680
subclass of: SO_0000673
so part of: SD1D_RS02680
location: 565097..565798
location: region:565097-565798:1
so has part: feature:565097-565798:1:exon

WP_058257491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565097-565798:1:exon

SD1D_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02685
old locus tag: SD1D_0540
so part of: sequence
location: 565791..566897
location: region:565791-566897:1
so has part: feature:565791-566897:1:exon
subclass of: SO_0000010

position:565791:1
position: 565791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566897:1
position: 566897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565791-566897:1:exon

SD1D_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02685
old locus tag: SD1D_0540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_028530133.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MSKRKAKKTNFKRALSFRILVRFFATIIIYSIAVITLFIVAKNFLGLFIWYEHDLLYRILNTIDDNYILFFILVMGLGYLIIFLYYWIRTMGYLDNIIKATEVIYNTEDELIELPSDLKEVEYRMNEIKMDIQKNQRAAKEAEQRKNDLVVYLAHDLKTPLTSVIGYLTLLRDEKDISEELKDKYLSITLEKAERLEELINEFFEITRFSLTDLTLETSKVNLTRMLEQITFEFKPMFLEKNLSYILNVSDNLMIKCDANKMQRVFDNIIRNAINYSFPQTTIEISVEEYSRDIKIRFTNHGNTIPAEKLERIFEQFYRLDSSRTSNTGGAGLGLAIAKEIVELHKGKINAKSDNDIIEFEITLPYIS
SIO_010081: SD1D_RS02685
subclass of: SO_0000673
so part of: SD1D_RS02685
location: 565791..566897
location: region:565791-566897:1
so has part: feature:565791-566897:1:exon

WP_058257492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565791-566897:1:exon

SD1D_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: vanG
locus tag: SD1D_RS02690
old locus tag: SD1D_0541
so part of: sequence
location: 567059..568111
location: region:567059-568111:1
so has part: feature:567059-568111:1:exon
subclass of: SO_0000010

position:567059:1
position: 567059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568111:1
position: 568111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567059-568111:1:exon

SD1D_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: vanG
locus tag: SD1D_RS02690
old locus tag: SD1D_0541
EC number: 6.3.2.35
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004068453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanine--D-serine ligase VanG
translation: MNKKKVAIIFGGCSDEYPVSLESAYAIISHIDNNLFETILIGITKEGSWFRYTGDIEKIKNDTWYEDKEACIPAMISTDRKYPGLIEFNMEELKYLKIDVVFPVLHGKNGEDGTVQGLIELAGIPLVGCGTLSSALCMDKDRAHRLVETLGISVPKAIVLLRPYDNKELFEKTKELNYPLFVKPIKSGSSFGITKVYNKEDLPKAVEIAFMHDDEVIIEENIDGFEVGCAVMGNDELIIGEIDEIELTDGFFDYTEKYNLKKSFIHMPARIDRDTADKVKETAASIYKILGCRGLARVDMFITPDKRIVFNEVNTIPGFTAHSRYPNMMKGIGIVFDELITKLIELGMEQ
SIO_010081: SD1D_RS02690
subclass of: SO_0000673
so part of: SD1D_RS02690
location: 567059..568111
location: region:567059-568111:1
so has part: feature:567059-568111:1:exon

WP_058257493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567059-568111:1:exon

SD1D_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02695
old locus tag: SD1D_0542
so part of: sequence
location: 568108..568854
location: region:568108-568854:1
so has part: feature:568108-568854:1:exon
subclass of: SO_0000010

position:568108:1
position: 568108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568854:1
position: 568854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568108-568854:1:exon

SD1D_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02695
old locus tag: SD1D_0542
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009460984.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M15 family metallopeptidase
translation: MKTITLYKNDIHKGSLILVNKFFPIVRSEDDILMRAIDDDNQDIYLESTTAAVLSHMFITLNCQENIVPISGYRSFKKQQSIYEKSLRDNGREFTEKYVALPNHSEHQTGLAVDLALKRDNIDFICPDFPYQGICNDFRNKAPLYGFIERYQKGKEEITGIGHEPWHFRYVGYPHSLIMNKYNLVLEEYIDLIRLYPYKRKHYLTYLYNQAVEIFYVDTSYKSIELPEDAIHQISGNNVDGFIVTLWR
SIO_010081: SD1D_RS02695
subclass of: SO_0000673
so part of: SD1D_RS02695
location: 568108..568854
location: region:568108-568854:1
so has part: feature:568108-568854:1:exon

WP_058257494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568108-568854:1:exon

SD1D_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
gene: vanT
locus tag: SD1D_RS02700
old locus tag: SD1D_0543
so part of: sequence
location: 568859..571012
location: region:568859-571012:1
so has part: feature:568859-571012:1:exon
subclass of: SO_0000010

position:568859:1
position: 568859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571012:1
position: 571012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568859-571012:1:exon

SD1D_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
gene: vanT
locus tag: SD1D_RS02700
old locus tag: SD1D_0543
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004618014.1
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine racemase VanT catalytic subunit
translation: MKKTKEYGGIDYFRIIAALLIVAIHTSPLASISNIADFILTRVIARVAVPFFFMTSGFFLFSNGSAKEEKIKRFLKKTSVIYLVTIVLYIPINFYAGYFYKKNLLFNIIKDIIFDGTIYHLWYLPAAILGVALVSLLIKYMSLNRAFIISCILYFIGVFGDSYYKIAAKSAVIKDVYKVIFIFSDYTRNGIFFAPIFLLLGSLVSKNINKFKKKEGLLYLYIFVALMMVEALLLRNFNLMRHDSMYFMLIPCMYFLFSLIVSYKVSSRKEFRNISLLIYLIHPMVIIMIRGGAKFLGMKAILVDNSIIHYILVTLCSGIIAVIIAYYMDKKKDSYPKNSKNKNSKKTCRSWIEINMGNLEHNVKELKSVMPKRCKFMAVVKANAYGHGAIEISRHLNRIGVDAFAVATIDEAIELRKNGIQGEILILGYTDVSRANELNHYHLIQTVIDYEYACMLNSQKKSLQVHIKIDTGMHRLGIPVEDIDKISKVFHMDMLKVTGIFTHLCVADQLDEEAEKFTKEQIDKFYGLLNRLELSGITIPKVHIQSSYGLLNYPQLTCDYARIGIALYGCLSTWEDRTRIGLSLRPVLSLKSKIAIIRNVEKGEGVSYGRDIHVTRDSRIAVLPLGYADGLPRNLSDGTGSVLIHGTKVPIVGRICMDQLLIDVTDMPKVKTGDIATLIGIDGKEEILAANLAKKAGTITNELLSRLGGRIERVYLK
SIO_010081: SD1D_RS02700
subclass of: SO_0000673
so part of: SD1D_RS02700
location: 568859..571012
location: region:568859-571012:1
so has part: feature:568859-571012:1:exon

WP_058257495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568859-571012:1:exon

SD1D_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02705
old locus tag: SD1D_0544
so part of: sequence
location: 571173..571697
location: region:571173-571697:1
so has part: feature:571173-571697:1:exon
subclass of: SO_0000010

position:571173:1
position: 571173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571697:1
position: 571697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571173-571697:1:exon

SD1D_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02705
old locus tag: SD1D_0544
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020816066.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKINLVYQIGLGGILTSITVILQSAPVFLPIIGLILSPFSTLPVALAALINVYLGLGVFTSSLFILLIVSIQEGAIFLFATGILGIVLGSLLFRKGILITILASSLTLSIGMILLTLIVAIPGFVYMVTCFAFIFIIIIYLMFSLAYVSIWTICFRRLANYLFKINIFGKFYN
SIO_010081: SD1D_RS02705
subclass of: SO_0000673
so part of: SD1D_RS02705
location: 571173..571697
location: region:571173-571697:1
so has part: feature:571173-571697:1:exon

WP_058257496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571173-571697:1:exon

SD1D_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02710
old locus tag: SD1D_0545
so part of: sequence
location: complement(571706..572266)
location: region:571706-572266:-1
so has part: feature:571706-572266:-1:exon
subclass of: SO_0000010

position:571706:-1
position: 571706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572266:-1
position: 572266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571706-572266:-1:exon

SD1D_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02710
old locus tag: SD1D_0545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006780914.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: folate family ECF transporter S component
translation: MRKILKSFKDSSKELKSVKCITITAMFGAISIVLNSFTTVMVTKFLKIGFFSFLPSRLVYFLFGPLVGGLFGAAMDILNFIVKPTGTFHPGFTFNALISGIIYGIFLYKKPVSITRILAANIVQMIIVSFILGSYWLTHLTGMTFLQLLPPRALKELIMLPFETFLFFLIIKGVEASGVLKLVYGK
SIO_010081: SD1D_RS02710
subclass of: SO_0000673
so part of: SD1D_RS02710
location: complement(571706..572266)
location: region:571706-572266:-1
so has part: feature:571706-572266:-1:exon

WP_058257497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571706-572266:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 1679721
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01831
inference: COORDINATES: profile:INFERNAL:1.1.4
note: THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tetrahydrofolate
so part of: sequence
location: complement(572348..572444)
location: region:572348-572444:-1
so has part: feature:572348-572444:-1:region

position:572348:-1
position: 572348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572444:-1
position: 572444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572348-572444:-1:region

SD1D_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02715
old locus tag: SD1D_0546
so part of: sequence
location: 572616..573683
location: region:572616-573683:1
so has part: feature:572616-573683:1:exon
subclass of: SO_0000010

position:572616:1
position: 572616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573683:1
position: 573683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572616-573683:1:exon

SD1D_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02715
old locus tag: SD1D_0546
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008514710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF362 domain-containing protein
translation: MSIIYINYGTKLQEITYEIMKEANIKAGLNSDMTIGIKPNLVVSRPAKEGATSHPEIVEGIIQYLQEAGIKNIIILEGSWIGDSTQKAFENCGYSALAKKYKVKLVDTKHDNAIRKESKGIQLNVCESALAVDYLINVPVLKGHCQTGLTCCLKNLKGCIPDSEKRRFHTLGLHTPIAALNAILRPSLHIVDSICGDLSFEEGGNPVVANRIMLGFDPVLLDSYGAQLIGYDPDEIVHLRIAKEYGLGNYISDETNIIELNSQNRPLVNIKANPIGSLLSKYIEEDSACSACYASLIYALDKLDRYKGDRIKIGQGFKGKKIKGLGVGQCTSGCEQYVKGCPPKASDIIKILENL
SIO_010081: SD1D_RS02715
subclass of: SO_0000673
so part of: SD1D_RS02715
location: 572616..573683
location: region:572616-573683:1
so has part: feature:572616-573683:1:exon

WP_058257498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572616-573683:1:exon

SD1D_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02720
old locus tag: SD1D_0547
so part of: sequence
location: 573859..574029
location: region:573859-574029:1
so has part: feature:573859-574029:1:exon
subclass of: SO_0000010

position:573859:1
position: 573859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574029:1
position: 574029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573859-574029:1:exon

SD1D_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02720
old locus tag: SD1D_0547
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYIILNTAKLMDENQTLYKLKELEYIEKICENVGNITVGGGTDLLSQLTKIIKGES
SIO_010081: SD1D_RS02720
subclass of: SO_0000673
so part of: SD1D_RS02720
location: 573859..574029
location: region:573859-574029:1
so has part: feature:573859-574029:1:exon

WP_157893087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:573859-574029:1:exon

SD1D_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02725
old locus tag: SD1D_0548
so part of: sequence
location: 574029..575231
location: region:574029-575231:1
so has part: feature:574029-575231:1:exon
subclass of: SO_0000010

position:575231:1
position: 575231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574029-575231:1:exon

SD1D_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02725
old locus tag: SD1D_0548
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006874694.1
GO function: GO:0008452 - RNA ligase activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RtcB family protein
translation: MIEIKGSVSSAKVFTDTIEEGAIAQIKQLCDMEYTKGSKIRIMPDVHEGAGCTIGTTMTISDKVVPNLVGVDIGCGMETILITNKHIELQKLDKLIYSKIPSGRNIREKPHKYNDEIDLSLLRCYKKVNVHRAIHSIGTLGGGNHFIEANKDEEGNIYIVIHSGSRHLGNEVAKYYQDMGYKRLNGNDKKALEELIAEYKQSGREKELQSAIDNLKKQELTNIPYSLAYVSDDLFEDYIHDMQIIQRFASLNRKAMADEIIRGMKLDPIEQFTTIHNYIDTEDMILRKGAVSAKLGEKILIPINMRDGSLICVGKGNEDWNYSAPHGAGRLMSRIEAKNTFTLSEFKEQMKDIYTTSVSNDTLDECPMAYKDMTDILNNIEHTAEVIKIIKPIYNFKASE
SIO_010081: SD1D_RS02725
subclass of: SO_0000673
so part of: SD1D_RS02725
location: 574029..575231
location: region:574029-575231:1
so has part: feature:574029-575231:1:exon

WP_058257499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574029-575231:1:exon

SD1D_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02730
old locus tag: SD1D_0549
so part of: sequence
location: complement(575341..576249)
location: region:575341-576249:-1
so has part: feature:575341-576249:-1:exon
subclass of: SO_0000010

position:575341:-1
position: 575341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576249:-1
position: 576249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575341-576249:-1:exon

SD1D_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02730
old locus tag: SD1D_0549
inference: COORDINATES: protein motif:HMM:NF013088.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MWFLFAVLTTLSWGTADLFYKKGSDSNDKYSHVKIGIMVGIVMGIHGVIYMLTKGISFDPFDMVKYLPVSFFYILSMLVGYWGLRYIELSISSPVQNSSGAITAIALILIFPQQLGALNILGIVLITGGVVGLAVLEKKLQTAALKAENVSVDPKYKIGVLAITFPILYAILDAIGTAADGIYLDELSLISEEAALLAYEFTWLLYAIFSLIYLIAIKKQKFNVLKEPVRASAAIFETAGQFFYVYAMSNNAVIAAPLIASYSIVSVILSRIFLKEKLSKQHYILIIIVMTGIAVLGLAEEL
SIO_010081: SD1D_RS02730
subclass of: SO_0000673
so part of: SD1D_RS02730
location: complement(575341..576249)
location: region:575341-576249:-1
so has part: feature:575341-576249:-1:exon

WP_058257500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575341-576249:-1:exon

SD1D_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02735
old locus tag: SD1D_0550
so part of: sequence
location: complement(576477..577103)
location: region:576477-577103:-1
so has part: feature:576477-577103:-1:exon
subclass of: SO_0000010

position:576477:-1
position: 576477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577103:-1
position: 577103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576477-577103:-1:exon

SD1D_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02735
old locus tag: SD1D_0550
EC number: 1.15.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009081788.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: superoxide dismutase
translation: MFKQIELNYNFNALEPYIDELTMNTHYSKHHAAYTNNLNGAIEKLPNLKDSSIEDIFKNLSDISDEALRNSVRNNGGGFYNHNLYFATLKPGGSKEPQGELAKQIEKNFGSFDSLKEKLTATALSRFGSGWAWLSADKNGELQVSSSPNQDNPIIESSGKWIPILGIDVWEHAYYLKYKNLRGDYIGAFFEVLNWDEVSANYAKVKSA
SIO_010081: SD1D_RS02735
subclass of: SO_0000673
so part of: SD1D_RS02735
location: complement(576477..577103)
location: region:576477-577103:-1
so has part: feature:576477-577103:-1:exon

WP_058257501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576477-577103:-1:exon

SD1D_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02740
old locus tag: SD1D_0551
so part of: sequence
location: complement(577432..578130)
location: region:577432-578130:-1
so has part: feature:577432-578130:-1:exon
subclass of: SO_0000010

position:577432:-1
position: 577432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578130:-1
position: 578130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577432-578130:-1:exon

SD1D_RS02740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02740
old locus tag: SD1D_0551
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIKSDACLEVMITIVDSSLEHKLSDYFKKLHPPIHFLTHGIGMAQSEVYEILGFGSPKKAISISVQPRPLSNHILNTLHNKIEFNKPGTGITFTIPIGSASSYITQICSKIKMDHTLEQEEIIMSAHPYNLIITIVNKGSFDQVMEAANSAGATGGTLLHGRGLATEEAVKFLGITIQPEKDIILILAPRESHHKIMESISHEVGINTPGKGICFSLPVNSALGLGTLIEE
SIO_010081: SD1D_RS02740
subclass of: SO_0000673
so part of: SD1D_RS02740
location: complement(577432..578130)
location: region:577432-578130:-1
so has part: feature:577432-578130:-1:exon

WP_058257502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:577432-578130:-1:exon

SD1D_RS02745
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02745
old locus tag: SD1D_0552
so part of: sequence
location: complement(578133..579758)
location: region:578133-579758:-1
so has part: feature:578133-579758:-1:exon
subclass of: SO_0000010

position:578133:-1
position: 578133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579758:-1
position: 579758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578133-579758:-1:exon

SD1D_RS02745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02745
old locus tag: SD1D_0552
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013656989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1538 domain-containing protein
translation: MKKLLLSKFKEAALSVLPIIIIVAILNFTVAPMSLYNMMLFLISAFVMILGIALFNLGVDISLMPIGENIGAALVKSKNLIFIIFLTFLIGVFVTVAEPDLFVLAGQINGVPDAFIIMAVALGVGLALILAFLRILFQIKLSYILMACYAIAFILSAFTEKNFLSIAFESGAVTTGPIMVPFIMALGLGLASVRGDKTSEEDSFGLISLCLIGPIITVMILGMFFNPAGGSALTLPEINSISNIIRLFLINIPEYMRQVALALFPMLLLFSIYQVTKLHLSKKNILRITIGTIYTFVGLVLFLLSVNIGFMPAGYLLGNTLVQNIPTWVLVLIGLIMGYFVVAAEPAVFVLKEQVEEVTEGSISAKAMGLGLSLGVGVSVALSMIRVITGISILYFVIPGYLIALILTFIVPPLFTSIAFDSGAVASGPLAATFLLPFAIGASEALGGNIYSDAFGIVALIAMTPVITLQLFGLTYVIKLRKIQNQNPLPVGDDNIIYYDDEDIEEDVSSDNVEERVDVNDINRYNSTKDDAHTKNIEAEV
SIO_010081: SD1D_RS02745
subclass of: SO_0000673
so part of: SD1D_RS02745
location: complement(578133..579758)
location: region:578133-579758:-1
so has part: feature:578133-579758:-1:exon

WP_087758733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578133-579758:-1:exon

SD1D_RS02750
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02750
old locus tag: SD1D_0553
so part of: sequence
location: complement(580057..581061)
location: region:580057-581061:-1
so has part: feature:580057-581061:-1:exon
subclass of: SO_0000010

position:580057:-1
position: 580057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581061:-1
position: 581061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580057-581061:-1:exon

SD1D_RS02750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02750
old locus tag: SD1D_0553
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004630596.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ig-like domain-containing protein
translation: MTKSKKILISVFLSFLLIFLSFSNIRYVEASNSLSFVLLSRYKKTVNIGDEFYIIALTSNGKKPKWSSSSSSIASVNSYGKVTAKKAGTATITAKINNAEASCKVTVKKTTITISQSSISIERGESYTLSATTSNKSSVTWKSSRKSVATVDDQGNVLGLKPGETTITVTADGSRASCKVKVKHPTVTLNKKKITLYRGQSEKLIAKVSSGVDPSWKSNKKTVAIINPDGTVTAIKNGTAIITATVDGVSQTCEVIVKKPQIKLSASEISIKTGETKLLSAYVSSGNYPEWSSSNPNVATVNCLGQVTGVKKGRAYIYVKEDGTKVRCTVYVTE
SIO_010081: SD1D_RS02750
subclass of: SO_0000673
so part of: SD1D_RS02750
location: complement(580057..581061)
location: region:580057-581061:-1
so has part: feature:580057-581061:-1:exon

WP_058257503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580057-581061:-1:exon

SD1D_RS02755
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02755
old locus tag: SD1D_0554
so part of: sequence
location: 581342..582679
location: region:581342-582679:1
so has part: feature:581342-582679:1:exon
subclass of: SO_0000010

position:581342:1
position: 581342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582679:1
position: 582679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581342-582679:1:exon

SD1D_RS02755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02755
old locus tag: SD1D_0554
inference: COORDINATES: protein motif:HMM:NF020337.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CotH kinase family protein
translation: MNKDKIKKTILYISVIIALVLFFFIYKNSSNEVLSNPYDIDIKENKSLYLNYNPGEVTDVYINVFPTKNKEGNLYDFSSFDITANWDKENNPKLDANVQFVTSNKEANLYQMRSPNASIRVRGNRGSALKSYRIKLIDGAYWGQSVFNINKNLRDPSRIANKLAHDLIKDIDHIYGFRTNFLRVYIRDDKQEGDFVPYGLYTHIEQPNKAYLKARGLDVAGSIYRAENFDFQLTKELKNVDDPLYNKEAFETVLSIREGKEHSKLIKMLKDINDENKEFNQLFHSYFHEENYLTWLSINILLGNVDAMSCGFLLYNPSDSSMWYLLPWDFDGIFLWMEEDEDMPSILDKLRDVNLHRRYLEQEGNLRKLHDKIEELISESFSPNKIKALKKTYKPILLEMMNKYPDNLLLNIPMVEYMAYIDQIDEKIYRNYQEFLKWYEVYSYK
SIO_010081: SD1D_RS02755
subclass of: SO_0000673
so part of: SD1D_RS02755
location: 581342..582679
location: region:581342-582679:1
so has part: feature:581342-582679:1:exon

WP_058257504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581342-582679:1:exon

SD1D_RS02760
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02760
old locus tag: SD1D_0555
so part of: sequence
location: 582697..583407
location: region:582697-583407:1
so has part: feature:582697-583407:1:exon
subclass of: SO_0000010

position:582697:1
position: 582697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583407:1
position: 583407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582697-583407:1:exon

SD1D_RS02760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02760
old locus tag: SD1D_0555
inference: COORDINATES: protein motif:HMM:NF020916.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyphosphate polymerase domain-containing protein
translation: MEYLGHKLRHEYKFYINTFLYHKLRKRLSHVLQKDPNMKDNEGYLISSIYFDDMYQSAMNDKLNGTRFRKKYRIRLYDRNDRIIKLECKSKYNHYISKEWAPLTREEYDSILNGDYEFLISRKEEVCRNLYAAHKTKVLRPVTVVEYQREAYVHEYGNVRITFDKNISASIGSLDIFDPDYELVGVNLQNMMVLEVKYDDYIPSHIWKLIQGGTMIQCAISKYVMCRDLNRKVRIL
SIO_010081: SD1D_RS02760
subclass of: SO_0000673
so part of: SD1D_RS02760
location: 582697..583407
location: region:582697-583407:1
so has part: feature:582697-583407:1:exon

WP_058257505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582697-583407:1:exon

SD1D_RS02765
type: Gene
subclass of: SO_0000704
RO_0002162: 1679721
locus tag: SD1D_RS02765
old locus tag: SD1D_0556
so part of: sequence
location: 583404..584072
location: region:583404-584072:1
so has part: feature:583404-584072:1:exon
subclass of: SO_0000010

position:583404:1
position: 583404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584072:1
position: 584072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583404-584072:1:exon

SD1D_RS02765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1679721
locus tag: SD1D_RS02765
old locus tag: SD1D_0556
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017413359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4956 domain-containing protein
translation: MIKFSDIFKKSFINDASMDLNFAGIILALLSAYICGMIIYFIYKHFYKGVLYSHNFNVLLVLLSMVTAFIVLTISSNIVLSLGMVGALSIVRFRTAIKDPLDLGFMFFAISIGITCGAGLYLLSFVSTIIISLVYIFLVKVKTPVHVYLLIVKHNKKAGEEVDKILSGMKYALKNKTIYKDNIELTIEMKLKANDTGFVSELSELEGVHSAALIDYTGDYGE
SIO_010081: SD1D_RS02765
subclass of: SO_0000673
so part of: SD1D_RS02765
location: 583404..584072
location: region:583404-584072:1
so has part: feature:583404-584072:1:exon

WP_058257506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583404-584072:1:exon