Wolbachia endosymbiont of Aedes albopictus isolate wAlbA-JF2017 plasmid pWALBA2, complete sequence.
type: Entry
definition: Wolbachia endosymbiont of Aedes albopictus isolate wAlbA-JF2017 plasmid pWALBA2, complete sequence.
sequence version: NZ_CP101659.1
sequence date: 2022-09-02
sequence: sequence
division: CON
label: NZ_CP101659.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN29328645
keyword: RefSeq
source: Wolbachia endosymbiont of Aedes albopictus
organism: Wolbachia endosymbiont of Aedes albopictus
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Wolbachieae; Wolbachia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP101659.1.\nBacteria and source DNA available from Prof. Steven P. Sinkins,\nMRC-University of Glasgow Centre for Virus Research, Glasgow, UK.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 27-SEP-2021\nAssembly Method :: Unicycler v. 0.4.8\nAssembly Name :: wAlbA\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 454.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/01/2022 18:22:04\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 1,276\nCDSs (total) :: 1,235\nGenes (coding) :: 1,177\nCDSs (with protein) :: 1,177\nGenes (RNA) :: 41\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 34\nncRNAs :: 4\nPseudo Genes (total) :: 58\nCDSs (without protein) :: 58\nPseudo Genes (ambiguous residues) :: 0 of 58\nPseudo Genes (frameshifted) :: 41 of 58\nPseudo Genes (incomplete) :: 30 of 58\nPseudo Genes (internal stop) :: 11 of 58\nPseudo Genes (multiple problems) :: 20 of 58\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 16844
topology: circular
so has quality: SO_0000988
location: 1..16844
location: region:1-16844:1
RO_0002162: 167957

NZ_CP101659
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN29328645
type: BioSample
SIO_000068: biosample

1
title: Genome sequencing and comparative analysis of Wolbachia strain wAlbA reveals Wolbachia-associated plasmids are common
author: Martinez, J.
author: Ant, T.H.
author: Murdochy, S.M.
author: Tong, L.
author: da Silva Filipe, A.
author: Sinkins, S.P.
journal: Unpublished

2
title: Direct Submission
author: Martinez, J.
author: Ant, T.H.
author: Murdochy, S.M.
author: Tong, L.
author: da Silva Filipe, A.
author: Sinkins, S.P.
journal: Submitted (20-JUL-2022) MRC-Centre for Virus Research, University of Glasgow, Sir Michael Stoker Building, Garscube Campus, 464 Bearsden Road, Glasgow G61 1QH, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16844:1
position: 16844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16844:1:source
so part of: sequence
organism: Wolbachia endosymbiont of Aedes albopictus
mol type: genomic DNA
isolate: wAlbA-JF2017
isolation source: Laboratory mosquito line (Malaysian nuclear background)
host: Aedes albopictus
plasmid: pWALBA2
country: United Kingdom: Glasgow
collection date: 2021-02-17

167957
type: Taxonomy
SIO_000068: taxonomy

NHG98_RS06315
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06315
old locus tag: NHG98_06325
so part of: sequence
location: 1..678
location: region:1-678:1
so has part: feature:1-678:1:exon
subclass of: SO_0000010

position:678:1
position: 678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-678:1:exon

NHG98_RS06315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06315
old locus tag: NHG98_06325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007301856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MVIVIGGQKGGSGKTTIATNIATMCVIENRNILLYDLDPQRTTTLWAYRRDEDQSLPRVDSIQKVLNGQTIQDGEVIVDELRNLQSECRDIIVDAGGINNEALRAALLLADLAIFPIIPSEFDMWTFETLNNLVANLQSCSRTLNAKVLINRVSTNPATAKKEIEDCDGFLSGFDNLTRFDSFLSERIAVRRASGKGMATVEYKPADLKAIKEFESVYKEVLNVQ
SIO_010081: NHG98_RS06315
subclass of: SO_0000673
so part of: NHG98_RS06315
location: 1..678
location: region:1-678:1
so has part: feature:1-678:1:exon

WP_259245613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-678:1:exon

NHG98_RS06320
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06320
old locus tag: NHG98_06330
so part of: sequence
location: 668..940
location: region:668-940:1
so has part: feature:668-940:1:exon
subclass of: SO_0000010

position:668:1
position: 668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940:1
position: 940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668-940:1:exon

NHG98_RS06320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06320
old locus tag: NHG98_06330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNRRVPIAQGGNRLSEINNSAAISSTLSYRKESQRERAFIKERKPTHSLLLKLPLDLHQKLREIAFKTEDKMTPIIIRAIEGYIKALEK
SIO_010081: NHG98_RS06320
subclass of: SO_0000673
so part of: NHG98_RS06320
location: 668..940
location: region:668-940:1
so has part: feature:668-940:1:exon

WP_259245614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:668-940:1:exon

NHG98_RS06325
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06325
old locus tag: NHG98_06335
so part of: sequence
location: complement(1223..2248)
location: region:1223-2248:-1
so has part: feature:1223-2248:-1:exon
subclass of: SO_0000010

position:1223:-1
position: 1223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2248:-1
position: 2248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1223-2248:-1:exon

NHG98_RS06325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06325
old locus tag: NHG98_06335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKDFYFNKKESQVKKTSFYCKFHNFDLRGSSHLVNVNSKHVRAQINSRRRVKAREKSVERKRPVRTFDDETRLTASELLQVLKNKEVRWFKNGTSVPEEHSSYLSEPFNPHKAKKIFSNAAQKEAEKYFVEIVNDKFYSLKTSQAPDVLSIREDAIKKVFEKFQDHPEIKVIMVYVKNLWITFDEHLYSIRGMKEKVDRHIDFIIKNTSEEREEKLLAAGATPDKVYQIFRTVQGYNLYQISLLSKRGGAAVEIYVRKELERRLKLIFNRFKDRMIKIGVNTEKDFFLIARRHVSFLFNKKYIQSRRRVLRELRHILSCIRENPFDVLEDYNKLYNLQGP
SIO_010081: NHG98_RS06325
subclass of: SO_0000673
so part of: NHG98_RS06325
location: complement(1223..2248)
location: region:1223-2248:-1
so has part: feature:1223-2248:-1:exon

WP_259245615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1223-2248:-1:exon

NHG98_RS06330
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06330
old locus tag: NHG98_06340
so part of: sequence
location: complement(2769..3914)
location: region:2769-3914:-1
so has part: feature:2769-3914:-1:exon
subclass of: SO_0000010

position:2769:-1
position: 2769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3914:-1
position: 3914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2769-3914:-1:exon

NHG98_RS06330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06330
old locus tag: NHG98_06340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011476858.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MYLRSITPVLERFSKLYPALGITGPRQSGKTTIAKTLFKHLPYVSLENIDTRFQAQNDPRAFLANYQQGAIFDEVQHVPELLSYLQEIADESPVKGRYVLTGSQNFALSHHVSQSLSGRIGMTTLLPLSLSELGTFINVNSAIFKGGYPGLHSLNIHPLDFYPSYIQTYIERDVRQLKNIENIGRFQTFLKLCAGRVGQILNLSSFAQDCGISHTTMRQWLNVLEASYLIFFLQPFHQSFNKRLIKMPKLYFYDTGLACTLLGLEKESQLETHYLKGALFENLIVLEIFKKHLNQGLPANIYFWRDRTGHEIDLLAERGGNIHAIEIKAGSTFQSDFIKNVQYFCKLSQTAKGYLIYTGQQNGSHAKVKLVPINEIDQLTK
SIO_010081: NHG98_RS06330
subclass of: SO_0000673
so part of: NHG98_RS06330
location: complement(2769..3914)
location: region:2769-3914:-1
so has part: feature:2769-3914:-1:exon

WP_259245616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2769-3914:-1:exon

NHG98_RS06335
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06335
old locus tag: NHG98_06345
so part of: sequence
location: 4368..5222
location: region:4368-5222:1
so has part: feature:4368-5222:1:exon
subclass of: SO_0000010

position:4368:1
position: 4368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5222:1
position: 5222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4368-5222:1:exon

NHG98_RS06335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06335
old locus tag: NHG98_06345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010402003.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MVLSKFLDPKNNYAFKRIFGSEKNKDILVHLLNDILGLTGEAKIKDVKFLNPILNPDIASQKESIVDVLCRDSKGIQTIVEMQVARTTGFEKRAQYYAAGAYFSQADVGGKYQDLKEVIFIAITDFVLFPEDSEHISTHHILNIKTYRHYLKDFKFVFIELPKFTKTKEDQLENIFEKWCYFFKYASETSEEDLQKIVGSDEVIGRAYNELVGYNWTKEERAIYYDDKKREDDNFSCIMQSRIEGKIEGKIEVAKNLLKADVSVDLIAESTGLPIDEIKKLKSN
SIO_010081: NHG98_RS06335
subclass of: SO_0000673
so part of: NHG98_RS06335
location: 4368..5222
location: region:4368-5222:1
so has part: feature:4368-5222:1:exon

WP_259245617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4368-5222:1:exon

NHG98_RS06340
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06340
old locus tag: NHG98_06350
so part of: sequence
location: complement(5444..5746)
location: region:5444-5746:-1
so has part: feature:5444-5746:-1:exon
subclass of: SO_0000010

position:5444:-1
position: 5444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5746:-1
position: 5746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5444-5746:-1:exon

NHG98_RS06340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06340
old locus tag: NHG98_06350
inference: COORDINATES: protein motif:HMM:NF016876.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MKKPYKKLYLVECAKRVLKKDIPALPADIRSIVLEIINGVLTTNPTSVGRKLLGEFEGHRRIEVKNYRMIYCVDTTEHKVDIVSVKHRQGVYKKFKPQKH
SIO_010081: NHG98_RS06340
subclass of: SO_0000673
so part of: NHG98_RS06340
location: complement(5444..5746)
location: region:5444-5746:-1
so has part: feature:5444-5746:-1:exon

WP_259245618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5444-5746:-1:exon

NHG98_RS06345
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06345
old locus tag: NHG98_06355
so part of: sequence
location: complement(5712..5939)
location: region:5712-5939:-1
so has part: feature:5712-5939:-1:exon
subclass of: SO_0000010

position:5712:-1
position: 5712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5939:-1
position: 5939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5712-5939:-1:exon

NHG98_RS06345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06345
old locus tag: NHG98_06355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADQKVSMTFSSELSGCLIDLAAVAEKPVQELVEKIMQQVIDEVENIGASKIIEECEGEERIKIDEETLQKVIFG
SIO_010081: NHG98_RS06345
subclass of: SO_0000673
so part of: NHG98_RS06345
location: complement(5712..5939)
location: region:5712-5939:-1
so has part: feature:5712-5939:-1:exon

WP_259245619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5712-5939:-1:exon

NHG98_RS06350
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06350
old locus tag: NHG98_06360
so part of: sequence
location: 6100..6948
location: region:6100-6948:1
so has part: feature:6100-6948:1:exon
subclass of: SO_0000010

position:6100:1
position: 6100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6948:1
position: 6948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6100-6948:1:exon

NHG98_RS06350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06350
old locus tag: NHG98_06360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007302982.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MVLSKFLDPKNNYAFKRIFGTEKNKDILVHLLNDILGLTGEAKIKDVKFLNPILNPDIASQKESIVDVLCRDSKGIQTIVEMQVARTTGFEKRAQYYAAGAYFSQADVGGKYQDLKEVIFIAITDFVLFPEDSEHISTHHILNIKTYRHYLKDFKFVFIELPKFTKTKEDQLENIFEKWCYFFKYASETSEEDLQKIVGSDEVIGRAYNELVGYNWTKEERAIYYDDKKREDDNFSCIMQSRIEGRKEREIEMAKAMLAEGMDVTTVARLTELSIDEIGKLN
SIO_010081: NHG98_RS06350
subclass of: SO_0000673
so part of: NHG98_RS06350
location: 6100..6948
location: region:6100-6948:1
so has part: feature:6100-6948:1:exon

WP_259245620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6100-6948:1:exon

NHG98_RS06355
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06355
old locus tag: NHG98_06365
so part of: sequence
location: 7188..8156
location: region:7188-8156:1
so has part: feature:7188-8156:1:exon
subclass of: SO_0000010

position:7188:1
position: 7188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8156:1
position: 8156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7188-8156:1:exon

NHG98_RS06355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06355
old locus tag: NHG98_06365
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MLAFAQRLRNMFRSNLANNPEGNMEEGYADGREHYELQELRNLNSQFFDICEREGVNSGINFLSDNGYLNRGSLSKVINTKNREGKDVITLVVESDNLECISTAFEYLTHEDFNRKGERDYTPLHEAVRLKSSNAVKKLLESEHVDVELLDEKFYKARKYIDDKETAKLFVKCYDEKISNLSGKVEDSNKKLVLIGRAMHTTKCIFGLLAAFGSVIKIYEDYNAGAEHNPIINTLGSLGSAAGLFVSINYCVDAVLSSYRKKSSSLKKERENFIEERYKVERKLYDFRKEQASSHTGTNLVAPRVLQLASVSDSVYSPEMRN
SIO_010081: NHG98_RS06355
subclass of: SO_0000673
so part of: NHG98_RS06355
location: 7188..8156
location: region:7188-8156:1
so has part: feature:7188-8156:1:exon

WP_096617899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7188-8156:1:exon

NHG98_RS06360
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06360
old locus tag: NHG98_06370
so part of: sequence
location: 8279..13042
location: region:8279-13042:1
so has part: feature:8279-13042:1:exon
subclass of: SO_0000010

position:8279:1
position: 8279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13042:1
position: 13042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8279-13042:1:exon

NHG98_RS06360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06360
old locus tag: NHG98_06370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQRASSIEESKSVKKTPSKTPAKRAKASKVSKDSDKKAEQSLIDVMQNESEQPSIPDSSLLEVPRGHKVKSGSTSRRTSFNSEASGNESDVSEVNDIDVEESWNSVLKKDIKKFIEEKKEKGESWWIELLGTKVGFDAVAKKWIRGEKAKDNLGQLPQALDELVVRLVCEIDISPGTAFEAKRIFALFESLSNVIEKEQRRKIVELIVQEDKTNLLKLVCNEENKGQWNKKKDGSMAASFNNSADRRYFWKGEFSGFATIAELLNYAIDQGSPGSVRLLVDKIYSALHPIYNKGRYLGSTLYLGHYSCSVNGKSIMSGQEKEEFFKELLEKVIEKGFTDSLLGMLGGDIAQLILRMSKDKFEACDELQDIYNMTKTAVIRVLQSLVQPQAEDRKALIKELIEKGATVEERDINEKDLIALAGEHGVKLLLKGKGKGYIKRKLQENGVNVSEVKRKLSQGVIYGIIVELFFHQHKQIYAIAEGTNKLIFYDYYKDLTDKDKVKEVLSDLKQDIEGEVLKVIIQLNKVGRAQQNLFSRLVFKEIMLVEPNKGKDSEINVDNVEKIIKACAALCQEPMQELVEGIKINKINLEIYNILRLINVELPDNITVLDTLSFNASDIIYNDFQREIGSVYNNPSSVPAFSGFSQYIIDMLEAGEEKLPEVISEVEKNVKVLDDKGSIDVNGTFQVLEILHPKITKEQRRKIVELIVQEDKTNLLKLICNEENKSRENKKKDGSMVTSSNNMAIGQYFWKGEFSGFATIVELLEYTIDQDSPGSARLLVDRIYSTLHPIYNRVQYLDNVRYLQNYRCSVNGKSVISVQEKEEFFKELLEKVIEKGFTDSLLGMLSGDIAQLILRMSKDKFEACDELQDIYNMTKTAVIDVLQSLVQPQAEDRKALIKELIEKGATVEEQDITEKDLIALVDEHKIKLPWKAGINDIKRKLQENGVNVSEVKRKLSQGVIYGIIVELFFHQHKQIYAIAEGTNKLIFHDSRNDPTDKGKVKEVLSDLKQDIEGEVLKVITKFNRVGHAQQNLFSRLVFKEIMLVEPNKGKDSEINVDNVEKIMKGCVALRKEPMQKLVDELREKGVTINEKVMDVLKLVGVDSLALEKSNVVASRNIPLLQIEDLTLSSNSGSEKSTSNELRQPSADAELTSDDCSSTSRDPLKINITGPERVAKAKVLSPPPPGSKAVEKKDKGFMQSNCGQGGESYYNADVGSSRYYLNIQNSCRMVGMHSLQQGGIDKIRSKQRESSRKKSSNVLLPKVSYLEDAHCERYREVFLNMMLDYNEFVDCRDLLQEDPNTGVGRSSLSSSSDTSLVTSPNSQNGSRDQSYEEEDHYLDGMRDYNDAIDLFKKRDVDQAKGKICQSASKKFEYGMFAYAIIKFKEAIEGNITLKNMSGVDCAPQEVIKEAVKCMLDSGKFFSPLSSFILGIMELYNPGNYGKVIQHESEMSWKRHFADVLRYTETTTLRDNLLGFIGASNLDSIQLTSYLNTVGEERGRKKLEFIVEYVEYELAKEMISNKKELVTADCLLKRLSSESFFDAKYSYAVALFSGRFGYKADEKKKEEIRVLLQDASRGCPEAKLFMGGV
SIO_010081: NHG98_RS06360
subclass of: SO_0000673
so part of: NHG98_RS06360
location: 8279..13042
location: region:8279-13042:1
so has part: feature:8279-13042:1:exon

WP_096617901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8279-13042:1:exon

NHG98_RS06365
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06365
old locus tag: NHG98_06375
so part of: sequence
location: 13002..14804
location: region:13002-14804:1
so has part: feature:13002-14804:1:exon
subclass of: SO_0000010

position:13002:1
position: 13002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14804:1
position: 14804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13002-14804:1:exon

NHG98_RS06365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06365
old locus tag: NHG98_06375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MDVQKQSFLWGGYESFKSVICWRYLEGYLNVKFGDKAVKQNYLKEKISIFVAHEYIKENSLYVQYDKLKAINIVQKNCDEAQLERLEKAIKKGKKCSQGLLDDEVLKTLKHMVHVLQDDKSNGKSYAQKLSDMLKQLREELKNSKMTIQQSSELSSILKSLADAKFDKKKDFSQLQHLCCFLEEQVSNEQEKVLSLLEKLQEELTNILKEMRSGSSASYCKVFSSLSSSNTGYMLPKSSNESPQAHSTPLGLKGNMHQFFRDKFLGINTTLSSREQLLCAEQELEKSQVKSMESEDLEGSFYLGMAALNVANKGLSGSRRTSFFVHSNPDDDVMGASLNVGVKLAKEGRLKDADSIFDDVFNKRESGGYSSYSKLKVLHNKAELYRTQGKDEECLKVYKIIYDKLGCDNPASLSVVRDIAGVFFKQGKFDDALRPLQEVYGAQEKILGGDHPGVISVFADIQEVLKAQKSECSTQLFQGREKGKSSYSSSSNTSGFASNFTALSGVQNISEGDKVTDSGSNPSSASGGVRQKQGSYSSRQNVPKSKKEWSNDVKPKKTVHSSKREVGATGSIPSLNKHTSKEQERREKNKVNSCGRGRGK
SIO_010081: NHG98_RS06365
subclass of: SO_0000673
so part of: NHG98_RS06365
location: 13002..14804
location: region:13002-14804:1
so has part: feature:13002-14804:1:exon

WP_259245610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13002-14804:1:exon

NHG98_RS06370
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06370
old locus tag: NHG98_06380
so part of: sequence
location: 15005..15166
location: region:15005-15166:1
so has part: feature:15005-15166:1:exon
subclass of: SO_0000010

position:15005:1
position: 15005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15166:1
position: 15166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15005-15166:1:exon

NHG98_RS06370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06370
old locus tag: NHG98_06380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDTLHSLNGSVEVFFSTILLKCYKKLDNPEAAKPQQKAFKNHTVKEDHLFLA
SIO_010081: NHG98_RS06370
subclass of: SO_0000673
so part of: NHG98_RS06370
location: 15005..15166
location: region:15005-15166:1
so has part: feature:15005-15166:1:exon

WP_259245611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15005-15166:1:exon

NHG98_RS06375
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06375
old locus tag: NHG98_06385
so part of: sequence
location: 15377..16426
location: region:15377-16426:1
so has part: feature:15377-16426:1:exon
subclass of: SO_0000010

position:15377:1
position: 15377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16426:1
position: 16426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15377-16426:1:exon

NHG98_RS06375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06375
old locus tag: NHG98_06385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015589087.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MFDISKIEITPEILKLVAEIDEFKGAWQLFGNLAPERLQMLKKIAAIESIGSSTRIEGAKLSDREVEQLLSRLDTRSFRSRDEQEIAGYAYVCEEVFQNFETMPFTENIMKQFHIWLLQFSYKDQRHMGEYKKFPNHVEAFDESGKSLGIIFEAASPFETVIQMQELIYWTSQQLEVKSLHHLLIIGIFIVTFLAIHPFQDGNGRLSRILTTFLLLKLGYTYVPYSSLESVIEGNKESYYLALRRTQQSLKTGSYDFNPWLMFFLRSLQKQKSHLEQKVSHEKMLNLYLPPLSAKILVLLSKHGRLTIKDLENITKANCNTLKKHVYNLVKSNHITQHGKGKATWYVSI
SIO_010081: NHG98_RS06375
subclass of: SO_0000673
so part of: NHG98_RS06375
location: 15377..16426
location: region:15377-16426:1
so has part: feature:15377-16426:1:exon

WP_259245612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15377-16426:1:exon

NHG98_RS06380
type: Gene
subclass of: SO_0000704
RO_0002162: 167957
locus tag: NHG98_RS06380
old locus tag: NHG98_06390
pseudo: true
so part of: sequence
location: 16565..>16706
location: region:16565-16706:1
so has part: feature:16565-16706:1:exon
subclass of: SO_0000010

position:16565:1
position: 16565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16706:1
position: 16706
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16565-16706:1:exon

NHG98_RS06380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 167957
locus tag: NHG98_RS06380
old locus tag: NHG98_06390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007301954.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS982 family transposase
SIO_010081: NHG98_RS06380
subclass of: SO_0000673
so part of: NHG98_RS06380
location: 16565..>16706
location: region:16565-16706:1
so has part: feature:16565-16706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16565-16706:1:exon