Wolbachia endosymbiont of Aedes albopictus isolate wAlbA-JF2017 plasmid pWALBA1, complete sequence.
Wolbachia endosymbiont of Aedes albopictus
Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Wolbachieae; Wolbachia.
Genome sequencing and comparative analysis of Wolbachia strain wAlbA reveals Wolbachia-associated plasmids are common
Submitted (20-JUL-2022) MRC-Centre for Virus Research, University of Glasgow, Sir Michael Stoker Building, Garscube Campus, 464 Bearsden Road, Glasgow G61 1QH, United Kingdom
REFSEQ INFORMATION: The reference sequence is identical to\nCP101658.1.\nBacteria and source DNA available from Prof. Steven P. Sinkins,\nMRC-University of Glasgow Centre for Virus Research, Glasgow, UK.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 27-SEP-2021\nAssembly Method :: Unicycler v. 0.4.8\nAssembly Name :: wAlbA\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 454.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/01/2022 18:22:04\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 1,276\nCDSs (total) :: 1,235\nGenes (coding) :: 1,177\nCDSs (with protein) :: 1,177\nGenes (RNA) :: 41\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 34\nncRNAs :: 4\nPseudo Genes (total) :: 58\nCDSs (without protein) :: 58\nPseudo Genes (ambiguous residues) :: 0 of 58\nPseudo Genes (frameshifted) :: 41 of 58\nPseudo Genes (incomplete) :: 30 of 58\nPseudo Genes (internal stop) :: 11 of 58\nPseudo Genes (multiple problems) :: 20 of 58\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Laboratory mosquito line (Malaysian nuclear background)
COORDINATES: similar to AA sequence:RefSeq:WP_007301856.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007301904.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: protein motif:HMM:NF015736.2
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010962382.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_007301859.1