Borreliella mayonii strain MN14-1539 plasmid cp32-6, complete sequence.
type: Entry
definition: Borreliella mayonii strain MN14-1539 plasmid cp32-6, complete sequence.
sequence version: NZ_CP015802.1
sequence date: 2023-03-13
sequence: sequence
division: CON
label: NZ_CP015802.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04979182
keyword: RefSeq
source: Borreliella mayonii (Borrelia mayonii)
organism: Borreliella mayonii
taxonomy: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella.
reference: 1
references: 28030649
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP015802.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP, SMRTAnalysis v. 2.3.0\nGenome Coverage :: missing\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/13/2023 02:20:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,302\nCDSs (total) :: 1,262\nGenes (coding) :: 1,178\nCDSs (with protein) :: 1,178\nGenes (RNA) :: 40\nrRNAs :: 2, 1, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 2 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 84\nCDSs (without protein) :: 84\nPseudo Genes (ambiguous residues) :: 0 of 84\nPseudo Genes (frameshifted) :: 51 of 84\nPseudo Genes (incomplete) :: 34 of 84\nPseudo Genes (internal stop) :: 29 of 84\nPseudo Genes (multiple problems) :: 24 of 84\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 17017
topology: circular
so has quality: SO_0000988
location: 1..17017
location: region:1-17017:1
RO_0002162: 1674146

NZ_CP015802
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04979182
type: BioSample
SIO_000068: biosample

1
title: Whole Genome Sequence and Comparative Genomics of the Novel Lyme Borreliosis Causing Pathogen, Borrelia mayonii
author: Kingry, L.C.
author: Batra, D.
author: Replogle, A.
author: Rowe, L.A.
author: Pritt, B.S.
author: Petersen, J.M.
journal: PLoS One 11 (12), e0168994 (2016)
pubmed: 28030649
comments: Publication Status: Online-Only

28030649
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Kingry, L.C.
author: Batra, D.
author: Rowe, L.
author: Petersen, J.
journal: Submitted (18-MAY-2016) Division of Vector-Borne Diseases, Centers for Disease Control and Prevention, 3156 Rampart Rd., Fort Collins, CO 80521, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17017:1
position: 17017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17017:1:source
so part of: sequence
organism: Borreliella mayonii
mol type: genomic DNA
strain: MN14-1539
isolation source: Blood
host: Homo sapiens
plasmid: cp32-6

1674146
type: Taxonomy
SIO_000068: taxonomy

A7X70_RS05225
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05225
old locus tag: A7X70_05205
pseudo: true
so part of: sequence
location: 66..>1084
location: region:66-1084:1
so has part: feature:66-1084:1:exon
subclass of: SO_0000010

position:66:1
position: 66
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084:1
position: 1084
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66-1084:1:exon

A7X70_RS05225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05225
old locus tag: A7X70_05205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012621337.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1073 domain-containing protein
SIO_010081: A7X70_RS05225
subclass of: SO_0000673
so part of: A7X70_RS05225
location: 66..>1084
location: region:66-1084:1
so has part: feature:66-1084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66-1084:1:exon

A7X70_RS05230
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05230
old locus tag: A7X70_05210
pseudo: true
so part of: sequence
location: 1137..1520
location: region:1137-1520:1
so has part: feature:1137-1520:1:exon
subclass of: SO_0000010

position:1137:1
position: 1137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520:1
position: 1520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137-1520:1:exon

A7X70_RS05230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05230
old locus tag: A7X70_05210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002658726.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1506 family protein
SIO_010081: A7X70_RS05230
subclass of: SO_0000673
so part of: A7X70_RS05230
location: 1137..1520
location: region:1137-1520:1
so has part: feature:1137-1520:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1137-1520:1:exon

A7X70_RS05235
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05235
old locus tag: A7X70_05215
pseudo: true
so part of: sequence
location: 1508..>1749
location: region:1508-1749:1
so has part: feature:1508-1749:1:exon
subclass of: SO_0000010

position:1508:1
position: 1508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1749:1
position: 1749
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1508-1749:1:exon

A7X70_RS05235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05235
old locus tag: A7X70_05215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014017447.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: A7X70_RS05235
subclass of: SO_0000673
so part of: A7X70_RS05235
location: 1508..>1749
location: region:1508-1749:1
so has part: feature:1508-1749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1508-1749:1:exon

A7X70_RS05240
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05240
pseudo: true
so part of: sequence
location: <1784..2016
location: region:1784-2016:1
so has part: feature:1784-2016:1:exon
subclass of: SO_0000010

position:1784:1
position: 1784
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2016:1
position: 2016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1784-2016:1:exon

A7X70_RS05240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010257832.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: BlyB family putative holin accessory protein
SIO_010081: A7X70_RS05240
subclass of: SO_0000673
so part of: A7X70_RS05240
location: <1784..2016
location: region:1784-2016:1
so has part: feature:1784-2016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1784-2016:1:exon

A7X70_RS06920
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS06920
pseudo: true
so part of: sequence
location: 2006..>2262
location: region:2006-2262:1
so has part: feature:2006-2262:1:exon
subclass of: SO_0000010

position:2006:1
position: 2006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2262:1
position: 2262
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2006-2262:1:exon

A7X70_RS06920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS06920
inference: COORDINATES: protein motif:HMM:NF017132.2
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: BlyB family putative holin accessory protein
SIO_010081: A7X70_RS06920
subclass of: SO_0000673
so part of: A7X70_RS06920
location: 2006..>2262
location: region:2006-2262:1
so has part: feature:2006-2262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2006-2262:1:exon

A7X70_RS05245
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05245
old locus tag: A7X70_05220
so part of: sequence
location: 2314..2667
location: region:2314-2667:1
so has part: feature:2314-2667:1:exon
subclass of: SO_0000010

position:2314:1
position: 2314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2667:1
position: 2667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2314-2667:1:exon

A7X70_RS05245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05245
old locus tag: A7X70_05220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010259076.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BBA14 family lipoprotein
translation: MLKRLHCLLIALLLCCTTIANLTEEPKPPIIQTLKSLAKYETQLSEYVMYLVTFLAKTKVKVNDPNYPEYPYPYLSTLKDEHSITAVKHNIKIYLEYIKKTKPIAGKVYNQYSQLKM
SIO_010081: A7X70_RS05245
subclass of: SO_0000673
so part of: A7X70_RS05245
location: 2314..2667
location: region:2314-2667:1
so has part: feature:2314-2667:1:exon

WP_075552661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2314-2667:1:exon

A7X70_RS05250
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
gene: revA
locus tag: A7X70_RS05250
old locus tag: A7X70_05225
so part of: sequence
location: complement(2805..3281)
location: region:2805-3281:-1
so has part: feature:2805-3281:-1:exon
subclass of: SO_0000010

position:2805:-1
position: 2805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281:-1
position: 3281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2805-3281:-1:exon

A7X70_RS05250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
gene: revA
locus tag: A7X70_RS05250
old locus tag: A7X70_05225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010883730.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fibronectin-binding protein RevA
translation: MKNKNIFKLFFVSMLFIMACKAYVEEKKEIDSLSTDVLVLKNDSSGDTFKDYKDKINKLKESLKDVSNAELEEKLLKLQSLFKDKLAAKLAALKAAKQTIEGYTDKDQKKTDIWKEAKLVGVTVPFSGNNTSGKGQEMATNAVGQIEKIIKFLEEGTN
SIO_010081: A7X70_RS05250
subclass of: SO_0000673
so part of: A7X70_RS05250
location: complement(2805..3281)
location: region:2805-3281:-1
so has part: feature:2805-3281:-1:exon

WP_075552649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2805-3281:-1:exon

A7X70_RS05255
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05255
old locus tag: A7X70_05230
so part of: sequence
location: 3456..3881
location: region:3456-3881:1
so has part: feature:3456-3881:1:exon
subclass of: SO_0000010

position:3456:1
position: 3456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3881:1
position: 3881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3456-3881:1:exon

A7X70_RS05255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05255
old locus tag: A7X70_05230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010883804.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mlp family lipoprotein
translation: MKIINILFCLFLLILNSCTANDTHIQQTKSRGKRDLPPKEVTQEKPKSKEELLREKLSEDQKTHLDWLKEALGNDGKFDKFLGYDESKIKEALDHIKSELDKCTGENANEQKSTFKQVVQGALGGGIDSFANQANSMCGGN
SIO_010081: A7X70_RS05255
subclass of: SO_0000673
so part of: A7X70_RS05255
location: 3456..3881
location: region:3456-3881:1
so has part: feature:3456-3881:1:exon

WP_075552650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3456-3881:1:exon

A7X70_RS05260
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05260
old locus tag: A7X70_05235
so part of: sequence
location: 3902..4528
location: region:3902-4528:1
so has part: feature:3902-4528:1:exon
subclass of: SO_0000010

position:3902:1
position: 3902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4528:1
position: 4528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3902-4528:1:exon

A7X70_RS05260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05260
old locus tag: A7X70_05235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012663409.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mlp family lipoprotein
translation: MKIINILFCLFLIMLNSCNSNDNDTFNNKSVQQTESRKKRDLSQEELQQQEKITLTHKEEKMFNLLKTVFTYTIKKLYNEMQESINGNKGEYESKCNNFFNWLFKDPQKQKELANAFTKVYNFLESKRQSKASGESFDAYIKGAIDCKNNDNNKYGNGSDNEIRQYFKGVADSTFSHKNDNNEIYKCLKDELLDDTNHYAGLTANWQN
SIO_010081: A7X70_RS05260
subclass of: SO_0000673
so part of: A7X70_RS05260
location: 3902..4528
location: region:3902-4528:1
so has part: feature:3902-4528:1:exon

WP_075552651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3902-4528:1:exon

A7X70_RS05265
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05265
old locus tag: A7X70_05240
pseudo: true
so part of: sequence
location: complement(4608..5553)
location: region:4608-5553:-1
so has part: feature:4608-5553:-1:exon
subclass of: SO_0000010

position:4608:-1
position: 4608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5553:-1
position: 5553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4608-5553:-1:exon

A7X70_RS05265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05265
old locus tag: A7X70_05240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014540134.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ERF family protein
SIO_010081: A7X70_RS05265
subclass of: SO_0000673
so part of: A7X70_RS05265
location: complement(4608..5553)
location: region:4608-5553:-1
so has part: feature:4608-5553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4608-5553:-1:exon

A7X70_RS05270
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05270
old locus tag: A7X70_05245
so part of: sequence
location: 5950..7044
location: region:5950-7044:1
so has part: feature:5950-7044:1:exon
subclass of: SO_0000010

position:5950:1
position: 5950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7044:1
position: 7044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5950-7044:1:exon

A7X70_RS05270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05270
old locus tag: A7X70_05245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014017691.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MTTSTNKKIVTCHNKHQYKLISLTSTLNYLNKKDKKYTQQIILYYFNENLKRNGLAPTTLRTMQNYLYKLEKVLKVTTNYYQHMGVNCGTEIYYKLKYPKNECYQKINKYFKERKNSRFKSRVNTHFKDNISKNGSVNSVECLSNKNNIKEERKINQIEKYQIRNYFNKCNFKTEEALSILYLNTDKDTKIEAMKILKQNEIVLIKRFNIKKSCIKEKQNKLKNILNNTQKEFEKNGYNPEQLEINLQKVYENYKFKPHFIIENHKYNDLSCIKRKLEKSIERKKENSQQNYQNLKANIFNILIEQLKKYANIEILKPIIKEYLNNQKKIEYNKVFGTYYLELLEIIKNEKNSLTTEEFSIKTV
SIO_010081: A7X70_RS05270
subclass of: SO_0000673
so part of: A7X70_RS05270
location: 5950..7044
location: region:5950-7044:1
so has part: feature:5950-7044:1:exon

WP_075552652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5950-7044:1:exon

A7X70_RS05275
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05275
old locus tag: A7X70_05250
so part of: sequence
location: 7054..7620
location: region:7054-7620:1
so has part: feature:7054-7620:1:exon
subclass of: SO_0000010

position:7054:1
position: 7054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7620:1
position: 7620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7054-7620:1:exon

A7X70_RS05275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05275
old locus tag: A7X70_05250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014017692.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF226 domain-containing protein
translation: MGNAPEPIETIKKGKCKVECQNKERFIKIEKENGKAMYHTKIMMDIYKFGVYEKKHEFRLSLRALFNGERIVEETHLYPIKEGDKFIGIFYGYRKPIKKPLIKYQINGTRKAYALARAYYMEFRFKVGSVFCYFKGLYRLLDKKRTNNHYNKVLFSMFTDLEQQVYKFYGKKYPEQGPLIKWILKNLK
SIO_010081: A7X70_RS05275
subclass of: SO_0000673
so part of: A7X70_RS05275
location: 7054..7620
location: region:7054-7620:1
so has part: feature:7054-7620:1:exon

WP_075552653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7054-7620:1:exon

A7X70_RS05280
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05280
old locus tag: A7X70_05255
so part of: sequence
location: 7596..8345
location: region:7596-8345:1
so has part: feature:7596-8345:1:exon
subclass of: SO_0000010

position:7596:1
position: 7596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8345:1
position: 8345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7596-8345:1:exon

A7X70_RS05280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05280
old locus tag: A7X70_05255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008882910.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDTKKPKIITIASIKGGVGKSTSAIIFATLLAQKYKVLLIDIDTQSSTTSYYYDDIQKSSIDLRKNNIYEVLIEKLDINRSIVNVANNLDLIPSYLTLHSINAFGYKHTFDEFRLKKELKYIDVGYNFIIIDTPPSLDFALTNALVCCNNVIVPLTAEKWTIESFDLLKFFMKKIGVELPTYFIITRFKKNNTHKQLLEMLNSKENFLGMISEREDLNRRIASNSSFDFQMDYIKEYKNSLINFYAKLK
SIO_010081: A7X70_RS05280
subclass of: SO_0000673
so part of: A7X70_RS05280
location: 7596..8345
location: region:7596-8345:1
so has part: feature:7596-8345:1:exon

WP_075552654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7596-8345:1:exon

A7X70_RS05285
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05285
old locus tag: A7X70_05260
so part of: sequence
location: 8395..8973
location: region:8395-8973:1
so has part: feature:8395-8973:1:exon
subclass of: SO_0000010

position:8395:1
position: 8395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8973:1
position: 8973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8395-8973:1:exon

A7X70_RS05285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05285
old locus tag: A7X70_05260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014017542.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MKNNTKLIINKRDIDSEGNALLVDSSNVSKNGVETDRYNTLKKKLYVNLREGVSNRVECMKILKEIKDNEYYKLDGYKSFDAFIKDYDVAKTQAYNYLKIANAIEAGVIEEQYVLDNGFRLILSVLKDKESPVLKKSKQNLIKPLRFQLKTEESYDFYKSNAKFTSFMMQEIFENQKDLISKLLKMYKQLKG
SIO_010081: A7X70_RS05285
subclass of: SO_0000673
so part of: A7X70_RS05285
location: 8395..8973
location: region:8395-8973:1
so has part: feature:8395-8973:1:exon

WP_075552655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8395-8973:1:exon

A7X70_RS06575
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
gene: bdr
locus tag: A7X70_RS06575
old locus tag: A7X70_05265
so part of: sequence
location: 8977..9645
location: region:8977-9645:1
so has part: feature:8977-9645:1:exon
subclass of: SO_0000010

position:8977:1
position: 8977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9645:1
position: 9645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8977-9645:1:exon

A7X70_RS06575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
gene: bdr
locus tag: A7X70_RS06575
old locus tag: A7X70_05265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010258659.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MNNLAYKTYNIESIKNEFLNIGFSKEAIDFVFLHNDNYNFEFLKEKLIDVEKNLQKDISNLDAKIDNVEKNLNLKIDGLNIKIDNVEKSLNAKIDSLDTKIDNVEKNLNIKIDSVKNELNSKIDSLDAKIDNVEKSLNAKIDSLDTKIDNVEKTLQKDIFSLNTKIDSVEKTLQKDIFSLDNKINVLKNELTASNRTIQVILIMGITLAPIIYSIFNKYFLN
SIO_010081: A7X70_RS06575
subclass of: SO_0000673
so part of: A7X70_RS06575
location: 8977..9645
location: region:8977-9645:1
so has part: feature:8977-9645:1:exon

WP_145924615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8977-9645:1:exon

A7X70_RS05300
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05300
old locus tag: A7X70_05270
so part of: sequence
location: 10127..11449
location: region:10127-11449:1
so has part: feature:10127-11449:1:exon
subclass of: SO_0000010

position:10127:1
position: 10127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11449:1
position: 11449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10127-11449:1:exon

A7X70_RS05300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05300
old locus tag: A7X70_05270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012621480.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF244 domain-containing protein
translation: MTNMSNNNPQDINQGELKMTSVNQQSFTGCEIFEEKSSPIKEKSKLSKICKKLPGISNQECFRFNRNIDFSIQRNKLDKYGASEVGNILVGGAGLKDLMINRMLKYFDMSLPFEENLYMLKGKELENLGFREFVKAYGDNIDILYKNKYANGVDKYNYFKKMGSSETLVGSTIDGWFINNNGDLELLEIKSSDSNYMSSAIDKYNKNGNFLSSKYFFKYYVQAQMQLACTGLEHCNLFFLIDAASINCKIKRNEALISKVFEFVNKCELEIINLKKDIYSNHREEYLMAHNFNEDTFIKLVEDLVERSDFYSSGVEFDWAREFIEYVDCVDLEIMDRQVAENVACDLMDVDSAKKELNKTQNEHKKIEKPLKDFIKMKTDNITNTCPLIEHVNYRFREFVFTFDSKKRAISDRLSGLLPTSETLFFPSNIAFSNSVGVPM
SIO_010081: A7X70_RS05300
subclass of: SO_0000673
so part of: A7X70_RS05300
location: 10127..11449
location: region:10127-11449:1
so has part: feature:10127-11449:1:exon

WP_075552657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10127-11449:1:exon

A7X70_RS05305
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05305
old locus tag: A7X70_05275
so part of: sequence
location: 11502..11903
location: region:11502-11903:1
so has part: feature:11502-11903:1:exon
subclass of: SO_0000010

position:11502:1
position: 11502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11903:1
position: 11903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11502-11903:1:exon

A7X70_RS05305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05305
old locus tag: A7X70_05275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014017566.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF261 domain-containing protein
translation: MLINKIKQDNRTLRPEIQRWGCYFLCLHYYTSLFKKREFNAYEINVAYYRFIGLGYIKSNCFIINPCMMLNYYGIRSSVRYESFGYLGTANEFEISEVKIDKVNGYHFIATKNKEILYDSLDLKPLRKIFKVT
SIO_010081: A7X70_RS05305
subclass of: SO_0000673
so part of: A7X70_RS05305
location: 11502..11903
location: region:11502-11903:1
so has part: feature:11502-11903:1:exon

WP_075552658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11502-11903:1:exon

A7X70_RS05310
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05310
old locus tag: A7X70_05280
pseudo: true
so part of: sequence
location: complement(11934..12711)
location: region:11934-12711:-1
so has part: feature:11934-12711:-1:exon
subclass of: SO_0000010

position:11934:-1
position: 11934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12711:-1
position: 12711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11934-12711:-1:exon

A7X70_RS05310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05310
old locus tag: A7X70_05280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014486141.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: site-specific integrase
SIO_010081: A7X70_RS05310
subclass of: SO_0000673
so part of: A7X70_RS05310
location: complement(11934..12711)
location: region:11934-12711:-1
so has part: feature:11934-12711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11934-12711:-1:exon

A7X70_RS05315
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05315
old locus tag: A7X70_05285
so part of: sequence
location: 13143..14195
location: region:13143-14195:1
so has part: feature:13143-14195:1:exon
subclass of: SO_0000010

position:13143:1
position: 13143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14195:1
position: 14195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13143-14195:1:exon

A7X70_RS05315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05315
old locus tag: A7X70_05285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012593059.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ErpC protein
translation: MSKKIKIFIICTVVIMISSCKNYHVSSKDLKQNAEEKIKGSLDKILDPTKDKITSNGTKVDEVAKKLQEEEKNELMQGDDPNNGVINPPPVLPASSQYNAPGLKAEQQSGGQQEEQAKVRKEDKGKGEKTEDRKEKQEDKEGSDKEKEEVEEQNKGKKQEAEKEAKEKQEREEQQRKAKQEAEKEAKAEQEREEQQKQEEEKKVKDKIKNLVDKIDKINGDIDGIKGKTSVGAEEVRDKITGPIYDDFTDGSSSIRTTWGDLEDDEDSDLGKLLKELSDTRDSLRTKLNVGNQPYIIDTRSIEPQLKENVSVSEIKSDLEKLKSELEKVKSYLKDSSKFEEIKGYISDSQ
SIO_010081: A7X70_RS05315
subclass of: SO_0000673
so part of: A7X70_RS05315
location: 13143..14195
location: region:13143-14195:1
so has part: feature:13143-14195:1:exon

WP_075552659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13143-14195:1:exon

A7X70_RS05320
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05320
old locus tag: A7X70_05295
pseudo: true
so part of: sequence
location: 14392..14912
location: region:14392-14912:1
so has part: feature:14392-14912:1:exon
subclass of: SO_0000010

position:14392:1
position: 14392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14912:1
position: 14912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14392-14912:1:exon

A7X70_RS05320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05320
old locus tag: A7X70_05295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010883896.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF643 domain-containing protein
SIO_010081: A7X70_RS05320
subclass of: SO_0000673
so part of: A7X70_RS05320
location: 14392..14912
location: region:14392-14912:1
so has part: feature:14392-14912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14392-14912:1:exon

A7X70_RS05325
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05325
old locus tag: A7X70_05300
so part of: sequence
location: 15102..15668
location: region:15102-15668:1
so has part: feature:15102-15668:1:exon
subclass of: SO_0000010

position:15102:1
position: 15102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15668:1
position: 15668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15102-15668:1:exon

A7X70_RS05325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05325
old locus tag: A7X70_05300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012599357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF603 domain-containing protein
translation: MKRVKRPFDDYVAYFREGSLSDKEIAAKLRVSKVNVWRMRQKWKSGESFVNEDSRLTISEDIFEHLLSQAFKSEVNAKKVRSELDLERANLELGFIRAFKQYSGVELASIYTKIENLITEIDALNKANSKKNKQVVNGEINSLKIELDEYIKECSIREMELYYECMKKLATANEAESKNNYKNSKGHK
SIO_010081: A7X70_RS05325
subclass of: SO_0000673
so part of: A7X70_RS05325
location: 15102..15668
location: region:15102-15668:1
so has part: feature:15102-15668:1:exon

WP_075552660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15102-15668:1:exon

A7X70_RS05330
type: Gene
subclass of: SO_0000704
RO_0002162: 1674146
locus tag: A7X70_RS05330
old locus tag: A7X70_05305
pseudo: true
so part of: sequence
location: 15665..17017
location: region:15665-17017:1
so has part: feature:15665-17017:1:exon
subclass of: SO_0000010

position:15665:1
position: 15665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15665-17017:1:exon

A7X70_RS05330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1674146
locus tag: A7X70_RS05330
old locus tag: A7X70_05305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014017644.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PBSX family phage terminase large subunit
SIO_010081: A7X70_RS05330
subclass of: SO_0000673
so part of: A7X70_RS05330
location: 15665..17017
location: region:15665-17017:1
so has part: feature:15665-17017:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15665-17017:1:exon