Borreliella mayonii strain MN14-1539 plasmid cp26, complete sequence.
Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella.
Whole Genome Sequence and Comparative Genomics of the Novel Lyme Borreliosis Causing Pathogen, Borrelia mayonii
Submitted (18-MAY-2016) Division of Vector-Borne Diseases, Centers for Disease Control and Prevention, 3156 Rampart Rd., Fort Collins, CO 80521, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP015797.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP, SMRTAnalysis v. 2.3.0\nGenome Coverage :: missing\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/13/2023 02:20:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,302\nCDSs (total) :: 1,262\nGenes (coding) :: 1,178\nCDSs (with protein) :: 1,178\nGenes (RNA) :: 40\nrRNAs :: 2, 1, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 2 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 84\nCDSs (without protein) :: 84\nPseudo Genes (ambiguous residues) :: 0 of 84\nPseudo Genes (frameshifted) :: 51 of 84\nPseudo Genes (incomplete) :: 34 of 84\nPseudo Genes (internal stop) :: 29 of 84\nPseudo Genes (multiple problems) :: 24 of 84\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_010890591.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012593118.1
COORDINATES: similar to AA sequence:RefSeq:WP_010256138.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890590.1
GO:0019191 - cellobiose transmembrane transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014017650.1
PTS lactose/cellobiose transporter subunit IIA
COORDINATES: similar to AA sequence:RefSeq:WP_010256148.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890588.1
COORDINATES: similar to AA sequence:RefSeq:WP_010256153.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890596.1
COORDINATES: similar to AA sequence:RefSeq:WP_011187127.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258218.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890586.1
COORDINATES: similar to AA sequence:RefSeq:WP_012593126.1
chromosome replication/partitioning protein
COORDINATES: similar to AA sequence:RefSeq:WP_012664938.1
COORDINATES: similar to AA sequence:RefSeq:WP_012593130.1
peptide ABC transporter substrate-binding protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_010890582.1
COORDINATES: similar to AA sequence:RefSeq:WP_012593116.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011600714.1
GO:0009279 - cell outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010256195.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890593.1
COORDINATES: similar to AA sequence:RefSeq:WP_014540089.1
COORDINATES: similar to AA sequence:RefSeq:WP_011600718.1
COORDINATES: similar to AA sequence:RefSeq:WP_014654067.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890599.1
COORDINATES: similar to AA sequence:RefSeq:WP_014654069.1
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011187143.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]