Pseudoalteromonas translucida chromosome II, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125
1. Genoscope, CNRS-UMR 8030, Atelier de Genomique Comparative, 2, rue Gaston Cremieux, 91006 Evry Cedex, France 2. Genetics of Bacterial Genomes, Institut Pasteur, 28 rue du Docteur Roux, 75724 Paris Cedex 15, France 3. Dept of Biochemistry & Biophysics, Stockholm University, S-106 91 Stockholm, Sweden 4. Dynamique, Evolution et Expression de Genomes de Micro-organismes, Universite Louis Pasteur, 28, rue Goethe, 67000 Strasbourg, France 5. Laboratoire de Biochimie, Institut de Chimie B6, Universite de Liege, B-4000 Liege-Sart Tilman, Belgium 6. Dipartimento di Chimica Organica e Biochimica, edificio MB, via Cinthia, Complesso Universitario Monte S. Angelo, 80126 Napoli, Italy 7. CEA Saclay, Laboratoire Stress Oxydants et Cancer, DSV/DBJC/SBMS, Bat 142, 91191 Gif sur Yvette Cedex, France
Submitted (26-APR-2005) Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr)
This sequence was made in collaboration between the laboratory Institut Pasteur (France) and Genoscope (France).
REFSEQ INFORMATION: The reference sequence is identical to\nCR954247.1.\nAnnotation data relative to COG assignations, enzymatic function\nprediction (PRIAM software), TMHMM and SignalP predictions, and\nsynteny results (Syntonizer software) are available in Psychroscope\ndatabase via MaGe annotation system\nhttp://www.genoscope.cns.fr/agc/mage/psychroscope. Each annotation\nincludes a confidence level as follow: 1 : Function experimentally\ndemonstrated in the studied organism 2a : Function of homologous\ngene experimentally demonstrated in an other organism\n2b : Function of strongly homologous gene\n3 : Function proposed based on presence of conserved amino acid\nmotif, structural feature or limited homology\n4 : Homologs of previously reported genes of unknown function 5 :\nNo homology to any previously reported sequences 6 : Doubtful CDS\n7 : Gene remnant\n\nThe organism was changed from 'Pseudoalteromonas haloplanktis\nTAC125' to 'Pseudoalteromonas translucida' in August 2020.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Taxonomic-Update-Statistics-START##\nThis Genome (query) :: GCA_000026085.1\nCurrent Name :: Pseudoalteromonas translucida\nPrevious Name :: Pseudoalteromonas haloplanktis\nDate Updated :: 2020-08-04\nAnalysis Type :: Average Nucleotide Identity (ANI)\nAnalysis 1 (A1) :: Query vs. TYPE genome for current name\nA1 Genome (subject) :: GCA_001465295.1\nA1 Name :: Pseudoalteromonas translucida\nA1 ANI :: 96.63%\nA1 Query Coverage :: 89.98%\nA1 Subject Coverage :: 83.53%\nAnalysis 2 (A2) :: Query vs. TYPE genome for previous name\nA2 Genome (subject) :: GCA_000238355.2\nA2 Name :: Pseudoalteromonas haloplanktis\nA2 ANI :: 82.24%\nA2 Query Coverage :: 20.1%\nA2 Subject Coverage :: 15.41%\n##Taxonomic-Update-Statistics-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/30/2022 01:02:12\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,521\nCDSs (total) :: 3,383\nGenes (coding) :: 3,361\nCDSs (with protein) :: 3,361\nGenes (RNA) :: 138\nrRNAs :: 10, 9, 9 (5S, 16S, 23S)\ncomplete rRNAs :: 10, 9, 9 (5S, 16S, 23S)\ntRNAs :: 106\nncRNAs :: 4\nPseudo Genes (total) :: 22\nCDSs (without protein) :: 22\nPseudo Genes (ambiguous residues) :: 0 of 22\nPseudo Genes (frameshifted) :: 10 of 22\nPseudo Genes (incomplete) :: 14 of 22\nPseudo Genes (internal stop) :: 4 of 22\nPseudo Genes (multiple problems) :: 4 of 22\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_007583176.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008169458.1
COORDINATES: similar to AA sequence:RefSeq:WP_008131810.1
COORDINATES: similar to AA sequence:RefSeq:WP_008166273.1
2.2.3.1 : Degradation of proteins, peptides, and glycopeptides
COORDINATES: similar to AA sequence:RefSeq:WP_008110827.1
COORDINATES: similar to AA sequence:RefSeq:WP_008109930.1
COORDINATES: similar to AA sequence:RefSeq:WP_010558007.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010558008.1
COORDINATES: similar to AA sequence:RefSeq:WP_008109924.1
COORDINATES: similar to AA sequence:RefSeq:WP_002963237.1
COORDINATES: similar to AA sequence:RefSeq:WP_004588804.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
copper resistance system multicopper oxidase
3.2.1.1.1 : Regulatory proteins (DNA interaction)
COORDINATES: similar to AA sequence:RefSeq:WP_013755226.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
heavy metal response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_010388405.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007375604.1
COORDINATES: similar to AA sequence:RefSeq:WP_012156551.1
1 : Cell envelope and membrane-associated cellular processes
COORDINATES: similar to AA sequence:RefSeq:WP_012156552.1
COORDINATES: similar to AA sequence:RefSeq:WP_002961317.1
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008171874.1
COORDINATES: protein motif:HMM:NF015412.2
GO:0033735 - aspartate dehydrogenase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008168938.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_010391134.1
COORDINATES: similar to AA sequence:RefSeq:WP_019441136.1
COORDINATES: similar to AA sequence:RefSeq:WP_010388769.1
COORDINATES: similar to AA sequence:RefSeq:WP_020458292.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004394089.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007378783.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556140.1
COORDINATES: similar to AA sequence:RefSeq:WP_017445697.1
COORDINATES: similar to AA sequence:RefSeq:WP_017445696.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017445695.1
COORDINATES: similar to AA sequence:RefSeq:WP_010388742.1
COORDINATES: similar to AA sequence:RefSeq:WP_002959148.1
COORDINATES: similar to AA sequence:RefSeq:WP_007378789.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007378790.1
COORDINATES: similar to AA sequence:RefSeq:WP_010388732.1
COORDINATES: similar to AA sequence:RefSeq:WP_008110786.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: similar to AA sequence:RefSeq:WP_016706411.1
COORDINATES: similar to AA sequence:RefSeq:WP_008139428.1
COORDINATES: similar to AA sequence:RefSeq:WP_008139426.1
COORDINATES: similar to AA sequence:RefSeq:WP_008110784.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836528.1
PepSY-associated TM helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007583595.1
COORDINATES: similar to AA sequence:RefSeq:WP_010364372.1
COORDINATES: similar to AA sequence:RefSeq:WP_011329688.1
COORDINATES: similar to AA sequence:RefSeq:WP_006793296.1
COORDINATES: similar to AA sequence:RefSeq:WP_008167000.1
COORDINATES: similar to AA sequence:RefSeq:WP_010552757.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
1.2.1 : Amino acids, peptides and amines
COORDINATES: similar to AA sequence:RefSeq:WP_008110776.1
COORDINATES: similar to AA sequence:RefSeq:WP_013462814.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008139302.1
COORDINATES: similar to AA sequence:RefSeq:WP_007376683.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583608.1
exonuclease SbcCD subunit D C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016706491.1
COORDINATES: similar to AA sequence:RefSeq:WP_002959191.1
COORDINATES: similar to AA sequence:RefSeq:WP_016899988.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583617.1
COORDINATES: similar to AA sequence:RefSeq:WP_011329702.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010556103.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006097 - glyoxylate cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002959200.1
GO:0004451 - isocitrate lyase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016899993.1
COORDINATES: similar to AA sequence:RefSeq:WP_008139346.1
COORDINATES: similar to AA sequence:RefSeq:WP_008139348.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011329708.1
heme ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010370070.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706483.1
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF015506.2
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010370061.1
MotA/TolQ/ExbB proton channel family protein
1.2 : Transport/binding proteins and lipoproteins
COORDINATES: similar to AA sequence:RefSeq:WP_010370058.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010370056.1
COORDINATES: similar to AA sequence:RefSeq:WP_010366076.1
COORDINATES: protein motif:HMM:NF040570.1
COORDINATES: similar to AA sequence:RefSeq:WP_008139350.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002959120.1
COORDINATES: similar to AA sequence:RefSeq:WP_008110735.1
NupC/NupG family nucleoside CNT transporter
2.3.1.4 : Salvage of nucleosides and nucleotides
COORDINATES: similar to AA sequence:RefSeq:WP_008110733.1
GO:0004849 - uridine kinase activity [Evidence IEA]
2.3.2 : Degradation of purine and pyrimidines
COORDINATES: similar to AA sequence:RefSeq:WP_013462848.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011329723.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010388685.1
COORDINATES: similar to AA sequence:RefSeq:WP_002962106.1
COORDINATES: similar to AA sequence:RefSeq:WP_004589283.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583526.1
COORDINATES: similar to AA sequence:RefSeq:WP_010389550.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016899082.1
GO:0009307 - DNA restriction-modification system [Evidence IEA]
DNA phosphorothioation-dependent restriction protein DptF
COORDINATES: similar to AA sequence:RefSeq:WP_020476920.1
DNA phosphorothioation-dependent restriction protein DptG
COORDINATES: similar to AA sequence:RefSeq:WP_020476921.1
DNA phosphorothioation-dependent restriction protein DptH
COORDINATES: protein motif:HMM:NF024977.2
COORDINATES: similar to AA sequence:RefSeq:WP_007421268.1
COORDINATES: similar to AA sequence:RefSeq:WP_016899086.1
COORDINATES: similar to AA sequence:RefSeq:WP_010375359.1
COORDINATES: similar to AA sequence:RefSeq:WP_016899087.1
DNA phosphorothioation system sulfurtransferase DndC
2.2.3 : Degradation of aminoacids and related molecules
COORDINATES: similar to AA sequence:RefSeq:WP_010375355.1
2.2.1 : Amino acid biosynthesis and salvage
COORDINATES: similar to AA sequence:RefSeq:WP_016899089.1
COORDINATES: similar to AA sequence:RefSeq:WP_010555000.1
nuclease-related domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008467425.1
COORDINATES: similar to AA sequence:RefSeq:WP_008467427.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010390296.1
COORDINATES: similar to AA sequence:RefSeq:WP_019028672.1
COORDINATES: similar to AA sequence:RefSeq:WP_012154429.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014610913.1
COORDINATES: protein motif:HMM:TIGR01434.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010556072.1
COORDINATES: similar to AA sequence:RefSeq:WP_010555210.1
GO:0008832 - dGTPase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006203 - dGTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013462872.1
ectonucleotide pyrophosphatase/phosphodiesterase
1.2.3 : Carbohydrates, organic alcohols, and acids
COORDINATES: similar to AA sequence:RefSeq:WP_008133190.1
GO:0042925 - benzoate transmembrane transporter activity [Evidence IEA]
GO:0042919 - benzoate transport [Evidence IEA]
benzoate/H(+) symporter BenE family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_016706408.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016899106.1
COORDINATES: similar to AA sequence:RefSeq:WP_002963106.1
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_012275215.1
COORDINATES: similar to AA sequence:RefSeq:WP_008139619.1
1.4 : Membrane bioenergetics (electron transport chain and ATP synthase)
COORDINATES: similar to AA sequence:RefSeq:WP_010556062.1
COORDINATES: similar to AA sequence:RefSeq:WP_013462896.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010554993.1
COORDINATES: similar to AA sequence:RefSeq:WP_010554992.1
COORDINATES: similar to AA sequence:RefSeq:WP_002962787.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583464.1
COORDINATES: similar to AA sequence:RefSeq:WP_007377419.1
COORDINATES: similar to AA sequence:RefSeq:WP_011041610.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011329766.1
COORDINATES: similar to AA sequence:RefSeq:WP_011329767.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008468629.1
COORDINATES: similar to AA sequence:RefSeq:WP_007377425.1
COORDINATES: similar to AA sequence:RefSeq:WP_002961305.1
COORDINATES: similar to AA sequence:RefSeq:WP_011769046.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556037.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008111354.1
GO:0005515 - protein binding [Evidence IEA]
outer membrane protein assembly factor BamB
COORDINATES: similar to AA sequence:RefSeq:WP_007377436.1
COORDINATES: similar to AA sequence:RefSeq:WP_011329775.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013462930.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013462931.1
COORDINATES: similar to AA sequence:RefSeq:WP_006793573.1
type IV pilus biogenesis/stability protein PilW
COORDINATES: similar to AA sequence:RefSeq:WP_011329779.1
bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
2.3.1 : Biosynthesis and salvage of purines, pyrimidines, nucleosides, and nucleotides
COORDINATES: similar to AA sequence:RefSeq:WP_012519000.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014951405.1
COORDINATES: similar to AA sequence:RefSeq:WP_016707521.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706364.1
tRNA 5-hydroxyuridine modification protein YegQ
COORDINATES: similar to AA sequence:RefSeq:WP_010554965.1
COORDINATES: similar to AA sequence:RefSeq:WP_010560885.1
COORDINATES: similar to AA sequence:RefSeq:WP_011329786.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011329787.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108681.1
N-acetylmannosamine-6-phosphate 2-epimerase
COORDINATES: similar to AA sequence:RefSeq:WP_008108683.1
COORDINATES: similar to AA sequence:RefSeq:WP_012154766.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108687.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108689.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108691.1
GO:0016829 - lyase activity [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008108693.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_008108695.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108698.1
COORDINATES: similar to AA sequence:RefSeq:WP_011329797.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015370 - solute:sodium symporter activity [Evidence IEA]
Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011329798.1
histidine kinase dimerization/phospho-acceptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011329799.1
COORDINATES: similar to AA sequence:RefSeq:WP_011329800.1
COORDINATES: similar to AA sequence:RefSeq:WP_008108707.1
thiol:disulfide interchange protein DsbG
COORDINATES: similar to AA sequence:RefSeq:WP_016706628.1
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010553522.1
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008138150.1
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_004587006.1
Sir2 family NAD-dependent protein deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_013462940.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008165683.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005398415.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_005501275.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_011329811.1
COORDINATES: similar to AA sequence:RefSeq:WP_006794418.1
COORDINATES: similar to AA sequence:RefSeq:WP_008130006.1
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004334492.1
GO:0009015 - N-succinylarginine dihydrolase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007586220.1
COORDINATES: similar to AA sequence:RefSeq:WP_004334505.1
organic hydroperoxide resistance protein
COORDINATES: similar to AA sequence:RefSeq:WP_004587025.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_013462949.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006006 - glucose metabolic process [Evidence IEA]
ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004587027.1
organoarsenical effux MFS transporter ArsJ
COORDINATES: similar to AA sequence:RefSeq:WP_004587028.1
COORDINATES: similar to AA sequence:RefSeq:WP_004334521.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004587030.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010553551.1
COORDINATES: similar to AA sequence:RefSeq:WP_013462955.1
COORDINATES: similar to AA sequence:RefSeq:WP_016900110.1
COORDINATES: similar to AA sequence:RefSeq:WP_008134127.1
COORDINATES: similar to AA sequence:RefSeq:WP_007377066.1
COORDINATES: similar to AA sequence:RefSeq:WP_006792596.1
COORDINATES: similar to AA sequence:RefSeq:WP_004587045.1
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010556873.1
COORDINATES: similar to AA sequence:RefSeq:WP_007378427.1
COORDINATES: similar to AA sequence:RefSeq:WP_006792600.1
curli production assembly/transport protein CsgE
COORDINATES: similar to AA sequence:RefSeq:WP_006792601.1
COORDINATES: similar to AA sequence:RefSeq:WP_008128503.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008468676.1
putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_007584327.1
aromatic amino acid DMT transporter YddG
COORDINATES: similar to AA sequence:RefSeq:WP_010553600.1
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008136404.1
COORDINATES: similar to AA sequence:RefSeq:WP_010553602.1
COORDINATES: similar to AA sequence:RefSeq:WP_004334683.1
COORDINATES: similar to AA sequence:RefSeq:WP_004334685.1
2.1.3.1 : Carbohydrates (other than glucose)
COORDINATES: similar to AA sequence:RefSeq:WP_007378534.1
COORDINATES: similar to AA sequence:RefSeq:WP_008165616.1
COORDINATES: similar to AA sequence:RefSeq:WP_002960089.1
COORDINATES: similar to AA sequence:RefSeq:WP_002960091.1
COORDINATES: similar to AA sequence:RefSeq:WP_011329846.1
COORDINATES: similar to AA sequence:RefSeq:WP_010553617.1
COORDINATES: similar to AA sequence:RefSeq:WP_010553618.1
COORDINATES: similar to AA sequence:RefSeq:WP_010553619.1
COORDINATES: protein motif:HMM:NF014335.2
COORDINATES: similar to AA sequence:RefSeq:WP_010553623.1
2.1 : Metabolism of carbohydrates and related molecules
COORDINATES: similar to AA sequence:RefSeq:WP_016900596.1
COORDINATES: protein motif:HMM:NF037126.2
COORDINATES: similar to AA sequence:RefSeq:WP_006082126.1
COORDINATES: similar to AA sequence:RefSeq:WP_002963310.1
COORDINATES: similar to AA sequence:RefSeq:WP_010553630.1
COORDINATES: similar to AA sequence:RefSeq:WP_006792647.1
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002960109.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010553633.1
COORDINATES: similar to AA sequence:RefSeq:WP_008165770.1
COORDINATES: similar to AA sequence:RefSeq:WP_008129661.1
COORDINATES: similar to AA sequence:RefSeq:WP_016900605.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
bifunctional TVP38/TMEM64 family protein/FAD-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007581771.1
COORDINATES: similar to AA sequence:RefSeq:WP_002960120.1
COORDINATES: similar to AA sequence:RefSeq:WP_002960122.1
COORDINATES: similar to AA sequence:RefSeq:WP_006792658.1
COORDINATES: similar to AA sequence:RefSeq:WP_006792659.1
threonine/serine exporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006792660.1
COORDINATES: similar to AA sequence:RefSeq:WP_004589552.1
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_010553651.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463046.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463047.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013463048.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463050.1
COORDINATES: similar to AA sequence:RefSeq:WP_002960155.1
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_010605554.1
COORDINATES: similar to AA sequence:RefSeq:WP_010376162.1
COORDINATES: similar to AA sequence:RefSeq:WP_002958167.1
COORDINATES: similar to AA sequence:RefSeq:WP_007375637.1
COORDINATES: similar to AA sequence:RefSeq:WP_007581812.1
COORDINATES: similar to AA sequence:RefSeq:WP_008115672.1
COORDINATES: similar to AA sequence:RefSeq:WP_010389236.1
COORDINATES: similar to AA sequence:RefSeq:WP_010555283.1
COORDINATES: similar to AA sequence:RefSeq:WP_008115667.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007581819.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556792.1
COORDINATES: similar to AA sequence:RefSeq:WP_008115664.1
COORDINATES: similar to AA sequence:RefSeq:WP_004587118.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007581823.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013463077.1
COORDINATES: similar to AA sequence:RefSeq:WP_002960604.1
COORDINATES: similar to AA sequence:RefSeq:WP_011329899.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002960612.1
COORDINATES: similar to AA sequence:RefSeq:WP_008466976.1
COORDINATES: similar to AA sequence:RefSeq:WP_007375614.1
COORDINATES: similar to AA sequence:RefSeq:WP_007581833.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706860.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_016706859.1
COORDINATES: similar to AA sequence:RefSeq:WP_008110356.1
COORDINATES: similar to AA sequence:RefSeq:WP_006791627.1
COORDINATES: similar to AA sequence:RefSeq:WP_016899614.1
COORDINATES: similar to AA sequence:RefSeq:WP_007375608.1
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016899615.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706844.1
COORDINATES: similar to AA sequence:RefSeq:WP_010554007.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]
GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011329914.1
COORDINATES: similar to AA sequence:RefSeq:WP_008133818.1
COORDINATES: similar to AA sequence:RefSeq:WP_010554005.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463109.1
COORDINATES: similar to AA sequence:RefSeq:WP_004588790.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556777.1
COORDINATES: similar to AA sequence:RefSeq:WP_007582338.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
AlkA N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF040563.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463112.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
2.3 : Metabolism of nucleotides and nucleic acids
COORDINATES: similar to AA sequence:RefSeq:WP_011329924.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
2.2 : Metabolism of amino acids and related molecules
COORDINATES: similar to AA sequence:RefSeq:WP_007582347.1
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010553995.1
GO:0008988 - rRNA (adenine-N6-)-methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
COORDINATES: similar to AA sequence:RefSeq:WP_016899168.1
COORDINATES: similar to AA sequence:RefSeq:WP_008112287.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556768.1
COORDINATES: similar to AA sequence:RefSeq:WP_010389126.1
oxidoreductase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007582356.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463121.1
2.4.1 : Fatty acid and phospholipid metabolism
COORDINATES: similar to AA sequence:RefSeq:WP_008171419.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463122.1
COORDINATES: similar to AA sequence:RefSeq:WP_002959008.1
COORDINATES: similar to AA sequence:RefSeq:WP_008126191.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556760.1
COORDINATES: similar to AA sequence:RefSeq:WP_008215675.1
COORDINATES: similar to AA sequence:RefSeq:WP_008171394.1
COORDINATES: similar to AA sequence:RefSeq:WP_016899159.1
COORDINATES: similar to AA sequence:RefSeq:WP_010389094.1
COORDINATES: similar to AA sequence:RefSeq:WP_008464323.1
COORDINATES: similar to AA sequence:RefSeq:WP_002959021.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011329944.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010605330.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011329946.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010389082.1
COORDINATES: protein motif:HMM:NF025844.2
COORDINATES: similar to AA sequence:RefSeq:WP_014998883.1
COORDINATES: similar to AA sequence:RefSeq:WP_002959028.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011074281.1
COORDINATES: similar to AA sequence:RefSeq:WP_008464337.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004588751.1
COORDINATES: similar to AA sequence:RefSeq:WP_008171365.1
COORDINATES: similar to AA sequence:RefSeq:WP_004588749.1
COORDINATES: similar to AA sequence:RefSeq:WP_004588748.1
COORDINATES: similar to AA sequence:RefSeq:WP_006791671.1
COORDINATES: similar to AA sequence:RefSeq:WP_010553964.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006791673.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_016706998.1
GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006791675.1
COORDINATES: similar to AA sequence:RefSeq:WP_002959040.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706995.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556737.1
GO:0016034 - maleylacetoacetate isomerase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013463146.1
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007375548.1
COORDINATES: similar to AA sequence:RefSeq:WP_007582414.1
COORDINATES: similar to AA sequence:RefSeq:WP_010389042.1
COORDINATES: similar to AA sequence:RefSeq:WP_010553956.1
COORDINATES: similar to AA sequence:RefSeq:WP_010389037.1
COORDINATES: similar to AA sequence:RefSeq:WP_002959048.1
2.1.3.5 : Biosynthesis and degradation of polysaccharides
COORDINATES: similar to AA sequence:RefSeq:WP_006791685.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0009166 - nucleotide catabolic process [Evidence IEA]
bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
COORDINATES: similar to AA sequence:RefSeq:WP_006791686.1
COORDINATES: similar to AA sequence:RefSeq:WP_008134350.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004588731.1
COORDINATES: similar to AA sequence:RefSeq:WP_011329978.1
COORDINATES: similar to AA sequence:RefSeq:WP_014610637.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463161.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463162.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556724.1
COORDINATES: similar to AA sequence:RefSeq:WP_008112361.1
COORDINATES: similar to AA sequence:RefSeq:WP_007375532.1
COORDINATES: similar to AA sequence:RefSeq:WP_007375531.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011329986.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
3.3 : Protein synthesis, maturation and folding
COORDINATES: similar to AA sequence:RefSeq:WP_002959067.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010389011.1
COORDINATES: similar to AA sequence:RefSeq:WP_008112375.1
COORDINATES: similar to AA sequence:RefSeq:WP_016899692.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463173.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007375523.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463175.1
GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - monoatomic anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: similar to AA sequence:RefSeq:WP_004588714.1
COORDINATES: similar to AA sequence:RefSeq:WP_007375520.1
COORDINATES: similar to AA sequence:RefSeq:WP_004588712.1
COORDINATES: similar to AA sequence:RefSeq:WP_007375511.1
COORDINATES: similar to AA sequence:RefSeq:WP_002958690.1
COORDINATES: similar to AA sequence:RefSeq:WP_008134312.1
COORDINATES: similar to AA sequence:RefSeq:WP_002958688.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007582023.1
COORDINATES: similar to AA sequence:RefSeq:WP_004588701.1
COORDINATES: similar to AA sequence:RefSeq:WP_004588700.1
COORDINATES: similar to AA sequence:RefSeq:WP_019029726.1
COORDINATES: similar to AA sequence:RefSeq:WP_008137242.1
COORDINATES: similar to AA sequence:RefSeq:WP_002958676.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010388985.1
COORDINATES: similar to AA sequence:RefSeq:WP_002958671.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010388980.1
COORDINATES: similar to AA sequence:RefSeq:WP_011330010.1
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002958667.1
COORDINATES: similar to AA sequence:RefSeq:WP_008463923.1
COORDINATES: similar to AA sequence:RefSeq:WP_019555988.1
COORDINATES: similar to AA sequence:RefSeq:WP_002958653.1
DUF6058 family natural product biosynthesis protein
1.1.1 : Biosynthesis of murein sacculus and peptidoglycan
COORDINATES: similar to AA sequence:RefSeq:WP_007580836.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_004586480.1
beta-ketoacyl synthase chain length factor
COORDINATES: similar to AA sequence:RefSeq:WP_004586479.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007580830.1
COORDINATES: similar to AA sequence:RefSeq:WP_002958648.1
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002958647.1
COORDINATES: similar to AA sequence:RefSeq:WP_007580823.1
COORDINATES: similar to AA sequence:RefSeq:WP_007580821.1
COORDINATES: similar to AA sequence:RefSeq:WP_007580819.1
COORDINATES: similar to AA sequence:RefSeq:WP_004586472.1
COORDINATES: similar to AA sequence:RefSeq:WP_008137191.1
COORDINATES: similar to AA sequence:RefSeq:WP_002958638.1
COORDINATES: similar to AA sequence:RefSeq:WP_004586469.1
outer membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_007378692.1
COORDINATES: similar to AA sequence:RefSeq:WP_016956407.1
COORDINATES: protein motif:HMM:NF023089.2
COORDINATES: similar to AA sequence:RefSeq:WP_008137179.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010553025.1
COORDINATES: similar to AA sequence:RefSeq:WP_011330034.1
COORDINATES: similar to AA sequence:RefSeq:WP_008137175.1
3.2.2 : Processing and degradation of RNA
COORDINATES: similar to AA sequence:RefSeq:WP_010388961.1
COORDINATES: similar to AA sequence:RefSeq:WP_013752783.1
COORDINATES: similar to AA sequence:RefSeq:WP_010553018.1
COORDINATES: similar to AA sequence:RefSeq:WP_002958625.1
carbohydrate binding family 9 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010553015.1
COORDINATES: similar to AA sequence:RefSeq:WP_008169633.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463220.1
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010553012.1
GO:0008812 - choline dehydrogenase activity [Evidence IEA]
GO:0019285 - glycine betaine biosynthetic process from choline [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002958619.1
GO:0008802 - betaine-aldehyde dehydrogenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002958618.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556260.1
COORDINATES: similar to AA sequence:RefSeq:WP_002958616.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706712.1
flavohemoglobin expression-modulating QEGLA motif protein
COORDINATES: similar to AA sequence:RefSeq:WP_011330050.1
COORDINATES: similar to AA sequence:RefSeq:WP_008137151.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
succinylglutamate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_008127882.1
GO:0008791 - arginine N-succinyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008127881.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002958609.1
COORDINATES: similar to AA sequence:RefSeq:WP_010388941.1
COORDINATES: similar to AA sequence:RefSeq:WP_011330057.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706706.1
COORDINATES: similar to AA sequence:RefSeq:WP_004586430.1
COORDINATES: similar to AA sequence:RefSeq:WP_008137126.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463244.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
23S rRNA pseudouridine(2604) synthase RluF
COORDINATES: similar to AA sequence:RefSeq:WP_010552590.1
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_010388925.1
COORDINATES: similar to AA sequence:RefSeq:WP_008137119.1
COORDINATES: similar to AA sequence:RefSeq:WP_010388923.1
COORDINATES: similar to AA sequence:RefSeq:WP_006791786.1
COORDINATES: protein motif:HMM:NF038354.1
COORDINATES: similar to AA sequence:RefSeq:WP_006034393.1
COORDINATES: protein motif:HMM:NF024675.2
COORDINATES: similar to AA sequence:RefSeq:WP_004334621.1
trimeric intracellular cation channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010552984.1
COORDINATES: similar to AA sequence:RefSeq:WP_002962450.1
COORDINATES: similar to AA sequence:RefSeq:WP_007376333.1
COORDINATES: similar to AA sequence:RefSeq:WP_010552979.1
LON peptidase substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011330075.1
COORDINATES: similar to AA sequence:RefSeq:WP_002962459.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008466637.1
DUF523 and DUF1722 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008137094.1
COORDINATES: similar to AA sequence:RefSeq:WP_007580706.1
COORDINATES: similar to AA sequence:RefSeq:WP_011330080.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008129196.1
COORDINATES: similar to AA sequence:RefSeq:WP_002962468.1
COORDINATES: similar to AA sequence:RefSeq:WP_010388905.1
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007580697.1
COORDINATES: similar to AA sequence:RefSeq:WP_008166799.1
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002962473.1
COORDINATES: similar to AA sequence:RefSeq:WP_008166804.1
COORDINATES: similar to AA sequence:RefSeq:WP_010388900.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011330088.1
GO:0003984 - acetolactate synthase activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006793428.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010552968.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706667.1
COORDINATES: similar to AA sequence:RefSeq:WP_007580680.1
GO:0017108 - 5'-flap endonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0033567 - DNA replication, Okazaki fragment processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010388893.1
nucleotide 5'-monophosphate nucleosidase PpnN
COORDINATES: similar to AA sequence:RefSeq:WP_013463272.1
COORDINATES: similar to AA sequence:RefSeq:WP_007376309.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556213.1
COORDINATES: similar to AA sequence:RefSeq:WP_008112581.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009836863.1
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002960290.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_010552957.1
gluconate operon transcriptional repressor GntR
COORDINATES: similar to AA sequence:RefSeq:WP_012090465.1
GO:0015128 - gluconate transmembrane transporter activity [Evidence IEA]
GO:0035429 - gluconate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004586387.1
COORDINATES: similar to AA sequence:RefSeq:WP_006793440.1
COORDINATES: similar to AA sequence:RefSeq:WP_010388878.1
COORDINATES: similar to AA sequence:RefSeq:WP_002960271.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: similar to AA sequence:RefSeq:WP_011330107.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_016708675.1
COORDINATES: similar to AA sequence:RefSeq:WP_008112598.1
COORDINATES: similar to AA sequence:RefSeq:WP_010388873.1
COORDINATES: similar to AA sequence:RefSeq:WP_011330113.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_002960265.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_007580650.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]; GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_011330116.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011330117.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011330118.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013463298.1
COORDINATES: similar to AA sequence:RefSeq:WP_010552946.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463302.1
COORDINATES: similar to AA sequence:RefSeq:WP_010552944.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_008167158.1
COORDINATES: similar to AA sequence:RefSeq:WP_008167159.1
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016900166.1
COORDINATES: similar to AA sequence:RefSeq:WP_016900167.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706639.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF007828.0
COORDINATES: similar to AA sequence:RefSeq:WP_011330129.1
GO:0032955 - regulation of division septum assembly [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_006793462.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008131728.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008134235.1
COORDINATES: similar to AA sequence:RefSeq:WP_006793465.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556194.1
COORDINATES: similar to AA sequence:RefSeq:WP_004334717.1
COORDINATES: similar to AA sequence:RefSeq:WP_008468054.1
COORDINATES: similar to AA sequence:RefSeq:WP_010552938.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463318.1
COORDINATES: similar to AA sequence:RefSeq:WP_008131733.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583259.1
COORDINATES: similar to AA sequence:RefSeq:WP_008111510.1
COORDINATES: similar to AA sequence:RefSeq:WP_008169954.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361955.1
COORDINATES: similar to AA sequence:RefSeq:WP_008169961.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836573.1
COORDINATES: similar to AA sequence:RefSeq:WP_006793481.1
COORDINATES: similar to AA sequence:RefSeq:WP_016900180.1
COORDINATES: similar to AA sequence:RefSeq:WP_008169966.1
COORDINATES: similar to AA sequence:RefSeq:WP_008111496.1
COORDINATES: similar to AA sequence:RefSeq:WP_008111495.1
COORDINATES: similar to AA sequence:RefSeq:WP_004334779.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004334787.1
COORDINATES: similar to AA sequence:RefSeq:WP_004334789.1
COORDINATES: similar to AA sequence:RefSeq:WP_006793491.1
COORDINATES: similar to AA sequence:RefSeq:WP_007377588.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007377587.1
COORDINATES: similar to AA sequence:RefSeq:WP_004334802.1
COORDINATES: similar to AA sequence:RefSeq:WP_010552919.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463339.1
translesion error-prone DNA polymerase V autoproteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008131764.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010552916.1
COORDINATES: similar to AA sequence:RefSeq:WP_008169996.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008169998.1
COORDINATES: similar to AA sequence:RefSeq:WP_004334897.1
COORDINATES: similar to AA sequence:RefSeq:WP_008139010.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556169.1
COORDINATES: similar to AA sequence:RefSeq:WP_013463345.1
alanine/glycine:cation symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011330169.1
COORDINATES: similar to AA sequence:RefSeq:WP_008468086.1
COORDINATES: similar to AA sequence:RefSeq:WP_008468085.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011330172.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002963130.1
DeoR/GlpR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008466872.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004586312.1
COORDINATES: similar to AA sequence:RefSeq:WP_004586310.1
COORDINATES: similar to AA sequence:RefSeq:WP_006794785.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008170020.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007379093.1
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007583189.1
COORDINATES: similar to AA sequence:RefSeq:WP_010388801.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004586305.1
pyruvate, water dikinase regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_010388800.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
3-deoxy-7-phosphoheptulonate synthase class II
binds to DNA replication terminator sequences to prevent passage of replication forks
COORDINATES: similar to AA sequence:RefSeq:WP_013463356.1
DNA replication terminus site-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013463357.1