Psychromicrobium lacuslunae strain IHBB 11108 plasmid pAG001, complete sequence.
Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Psychromicrobium.
Complete Genome Sequencing of Protease-Producing Novel Arthrobacter sp. Strain IHBB 11108 Using PacBio Single-Molecule Real-Time Sequencing Technology
Submitted (04-MAR-2015) Division of Biotechnology, CSIR-Institute of Himalayan Bioresource Technology, PO Box 06, Palampur, HP 176061, India
REFSEQ INFORMATION: The reference sequence is identical to\nCP011006.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2015\nAssembly Method :: HGAP v. 2.0\nAssembly Name :: Arthrobacter Genome Assembly\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 282.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/07/2022 19:50:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,390\nCDSs (total) :: 3,336\nGenes (coding) :: 3,313\nCDSs (with protein) :: 3,313\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 3\nPseudo Genes (total) :: 23\nCDSs (without protein) :: 23\nPseudo Genes (ambiguous residues) :: 0 of 23\nPseudo Genes (frameshifted) :: 4 of 23\nPseudo Genes (incomplete) :: 18 of 23\nPseudo Genes (internal stop) :: 1 of 23\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Psychromicrobium lacuslunae
India: Chandra Tal lake at Lahual and Spiti
COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1
GO:0008800 - beta-lactamase activity [Evidence IEA]
GO:0030655 - beta-lactam antibiotic catabolic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_000165985.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
Rop family plasmid primer RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_000538659.1
COORDINATES: similar to AA sequence:RefSeq:WP_005291943.1
COORDINATES: similar to AA sequence:RefSeq:WP_001297013.1
Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter