Liquorilactobacillus mali strain LM596 plasmid unnamed2, complete sequence.
type: Entry
definition: Liquorilactobacillus mali strain LM596 plasmid unnamed2, complete sequence.
sequence version: NZ_CP045037.1
sequence date: 2023-03-17
sequence: sequence
division: CON
label: NZ_CP045037.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN12784790
keyword: RefSeq
source: Liquorilactobacillus mali
organism: Liquorilactobacillus mali
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Liquorilactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP045037.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: PacBio SMRT Analysis v. v2.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 260.63x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/17/2023 01:22:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,582\nCDSs (total) :: 2,500\nGenes (coding) :: 2,420\nCDSs (with protein) :: 2,420\nGenes (RNA) :: 82\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 60\nncRNAs :: 4\nPseudo Genes (total) :: 80\nCDSs (without protein) :: 80\nPseudo Genes (ambiguous residues) :: 0 of 80\nPseudo Genes (frameshifted) :: 52 of 80\nPseudo Genes (incomplete) :: 30 of 80\nPseudo Genes (internal stop) :: 5 of 80\nPseudo Genes (multiple problems) :: 7 of 80\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 48377
topology: circular
so has quality: SO_0000988
location: 1..48377
location: region:1-48377:1
RO_0002162: 1618

NZ_CP045037
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN12784790
type: BioSample
SIO_000068: biosample

1
title: Genome sequencing of Lactobacillus mali
author: Kim, K.
journal: Unpublished

2
title: Direct Submission
author: Kim, K.
journal: Submitted (08-OCT-2019) College of Health Science, Korea University, Anam-ro 145, Seoul 02841, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48377:1
position: 48377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-48377:1:source
so part of: sequence
organism: Liquorilactobacillus mali
mol type: genomic DNA
strain: LM596
isolation source: apple juice from cider press
plasmid: unnamed2
collection date: 1990-08-22

1618
type: Taxonomy
SIO_000068: taxonomy

LM596_RS12480
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12480
old locus tag: LM596_12480
so part of: sequence
location: 1..561
location: region:1-561:1
so has part: feature:1-561:1:exon
subclass of: SO_0000010

position:561:1
position: 561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-561:1:exon

LM596_RS12480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12480
old locus tag: LM596_12480
EC number: 6.3.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016384766.1
GO function: GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO process: GO:0006730 - one-carbon metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-formyltetrahydrofolate cyclo-ligase
translation: MPSKAEFRPLQLKRLKAAQKATQAASAALLAALVQTPMWQRAHSIGVTVSGPFEVPTEPIIQAAHDANKAVYLPRVMPKRQMVFLPDPGKDKLITSAFGIPEPPYQADQIHAAPDLILVPGIGFSLADKYRIGFGGGYYDRFLTTYRGTTITLVPPVMAFPQVAWPVEPFDVPIQTLILANGDVIV
SIO_010081: LM596_RS12480
subclass of: SO_0000673
so part of: LM596_RS12480
location: 1..561
location: region:1-561:1
so has part: feature:1-561:1:exon

WP_003569255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-561:1:exon

LM596_RS12485
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12485
old locus tag: LM596_12485
pseudo: true
so part of: sequence
location: 656..>1231
location: region:656-1231:1
so has part: feature:656-1231:1:exon
subclass of: SO_0000010

position:656:1
position: 656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231:1
position: 1231
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656-1231:1:exon

LM596_RS12485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12485
old locus tag: LM596_12485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003601488.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: LM596_RS12485
subclass of: SO_0000673
so part of: LM596_RS12485
location: 656..>1231
location: region:656-1231:1
so has part: feature:656-1231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656-1231:1:exon

LM596_RS12490
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12490
old locus tag: LM596_12490
so part of: sequence
location: 1482..3014
location: region:1482-3014:1
so has part: feature:1482-3014:1:exon
subclass of: SO_0000010

position:1482:1
position: 1482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3014:1
position: 3014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1482-3014:1:exon

LM596_RS12490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12490
old locus tag: LM596_12490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005685191.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease/substrate-binding protein
translation: MADLWRTISERHGELLSALGQHIEISLIALMIAVVIAIPLAVWVQTHHKTAAVLLQVTGVLQTIPSLALLGLLIPFVGIGTLPAIIALVVYALLPIFQNTYIGLRDIDPSYEEAADAFGMSRLRKLFKVELPIALPVILSGVRTAMVMIIGTATLAALIGAGGLGTFILLGIDRNDAALTLMGALAAALLAIVFSWLLNVMQKVSWKVSVGVVAVAIFGMVGSQVYTYVTAPKETITIAGKLGSEPDILINMYKELIQKADPDVGVTLKSNFGQTSFLYNALRTDKIDIYPEFSGTVLASLTKPSAAQQQQVTAGKDNYPLAKKLLAKQGLSYLKPMAYNNTYALVVKESFAKRYDLHTISDLGKIAPSIRAGFDLEFIDRQDGYKGIQSKYGLQFKVDSMDASLRYQALDRGQINLTDGYTTDAQLRQYHLVALQDDKGLFPIYRGAPLMRTAFAEKHPQLVAALNKLAGQITEKQMQTMNYAVSVKNEKAATVAHRYLVQHGLLKEVR
SIO_010081: LM596_RS12490
subclass of: SO_0000673
so part of: LM596_RS12490
location: 1482..3014
location: region:1482-3014:1
so has part: feature:1482-3014:1:exon

WP_003688730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1482-3014:1:exon

LM596_RS12495
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12495
old locus tag: LM596_12495
so part of: sequence
location: 3014..3973
location: region:3014-3973:1
so has part: feature:3014-3973:1:exon
subclass of: SO_0000010

position:3973:1
position: 3973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3014-3973:1:exon

LM596_RS12495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12495
old locus tag: LM596_12495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003576557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MALISLEHVTKEYDGKPVVNDLSLKVDQGELFVLVGTSGSGKTTTLKMINRLVDPTSGVIEFADKPLTSYKMRDLRWDLGYVLQQIALFPTMTVAQNIAVIPEMKGWSRQKIRTATDELLTTVDLPPAEYRNRMPSELSGGQQQRIGILRALASRPKVVLMDEPFSALDPISRTQLQDMLLHLHRALKNTVIFVTHDMAEAMKLGDRIGVMRGGKLLQVDTPEKIATNPANDFVADLFKGAQANQGLQVTLSQLAPFAADVSARHAVGGNLTLAEALPLLDAHEALHVNSEHGAFVVNTHSVVAYLASAFVDQNTETKE
SIO_010081: LM596_RS12495
subclass of: SO_0000673
so part of: LM596_RS12495
location: 3014..3973
location: region:3014-3973:1
so has part: feature:3014-3973:1:exon

WP_003688732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3014-3973:1:exon

LM596_RS12500
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12500
old locus tag: LM596_12500
so part of: sequence
location: 3979..5304
location: region:3979-5304:1
so has part: feature:3979-5304:1:exon
subclass of: SO_0000010

position:3979:1
position: 3979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5304:1
position: 5304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3979-5304:1:exon

LM596_RS12500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12500
old locus tag: LM596_12500
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016387660.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MAYDYGTIVIGGGPGGLAAAYGLAAKQKVLVVENDLWGGTCPNYGCDPKKMLYRGVEVKNAALRMNGFGISGTAKIDWPSLMAFKRSYTTGVPAGTLNGLTHAGITTLYGHAQLLGEHAVKVGSQNVTGEHIVIATGHTPRYPDIPGANLLKTSRDFLDLDQLPTSIAFIGAGYVSVELVNIAAAAGAEVHIIGHSDRLLRAFPKVATEALKPLLAKTGIHFHPNVKLTKITPLGTMTHLHADNFDLNVDMAITAMGRIANVADLGLANAGIKADTRGIPVDDHLRTAVETIYAIGDVNLKPQPKLTPVAGFEGSYVAEQILGDPTPITYPAIPNIVFGPTELAKVGVSLETAEAAPDQYTVKHNGTTHWYTYNRIQDPDAQVWTIVDKKTGRLAGAVVLASLAEDLINTFAAAIDAGEKPSDLNKIYAYPSAQSDLQYLF
SIO_010081: LM596_RS12500
subclass of: SO_0000673
so part of: LM596_RS12500
location: 3979..5304
location: region:3979-5304:1
so has part: feature:3979-5304:1:exon

WP_003688734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3979-5304:1:exon

LM596_RS12505
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12505
old locus tag: LM596_12505
so part of: sequence
location: complement(5355..6275)
location: region:5355-6275:-1
so has part: feature:5355-6275:-1:exon
subclass of: SO_0000010

position:5355:-1
position: 5355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6275:-1
position: 6275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5355-6275:-1:exon

LM596_RS12505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12505
old locus tag: LM596_12505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003574021.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MAIITLIERSQIELMQHHTIQYIAATLGRSRISIRHELHRCPEGDYCAIIAQDHADTCRHRCGRHSILTPKLKRMVTEKLNLGWSPEMVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRPTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
SIO_010081: LM596_RS12505
subclass of: SO_0000673
so part of: LM596_RS12505
location: complement(5355..6275)
location: region:5355-6275:-1
so has part: feature:5355-6275:-1:exon

WP_029327458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5355-6275:-1:exon

LM596_RS12510
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12510
old locus tag: LM596_12510
so part of: sequence
location: 6710..7141
location: region:6710-7141:1
so has part: feature:6710-7141:1:exon
subclass of: SO_0000010

position:6710:1
position: 6710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7141:1
position: 7141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6710-7141:1:exon

LM596_RS12510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12510
old locus tag: LM596_12510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016497299.1
GO process: GO:0006825 - copper ion transport [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopY/TcrY family copper transport repressor
translation: MQDAKNVTITDSEWMVMRAIWTMGHATSRELIDAMNELEGWSASTTKTLLHRLIQKQAVAQHGGSRPFTYKPVVGEKESMAAAADDLFDHMCAMRAGSTIAGVIQSRELSRADIANLQAILAEKAKTAPEEVQCNCLPGDQTC
SIO_010081: LM596_RS12510
subclass of: SO_0000673
so part of: LM596_RS12510
location: 6710..7141
location: region:6710-7141:1
so has part: feature:6710-7141:1:exon

WP_003688738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6710-7141:1:exon

LM596_RS12515
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12515
old locus tag: LM596_12515
so part of: sequence
location: 7391..9637
location: region:7391-9637:1
so has part: feature:7391-9637:1:exon
subclass of: SO_0000010

position:7391:1
position: 7391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9637:1
position: 9637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7391-9637:1:exon

LM596_RS12515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12515
old locus tag: LM596_12515
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003660027.1
GO function: GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]; GO:0043682 - P-type divalent copper transporter activity [Evidence IEA]
GO process: GO:0006825 - copper ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MANKEDHMNMKNMSAKNMENNESNMSHMDHDDMKMDHDMTETDHNQMNMDHDMAEMDHGQMNMNHETMNMSGMNHGDMDMAGTDMMMHGGSMMHMGNLKVKFWVSVVLAIPVLLLAPIMGLNVSILSFSSPLIVGIIIVLFDTALYFYGGMPFLKGAKAEIQDKSPEMMTLVTLGISVSYFYSLYAFIANNFLNPANHVMNFSFELATLILIMLLGHWIEMNALMGAGDALQKMAALLPKTAHLVTDNGETKEVPVSDLKVGQAFQVRSGESIPADGVITAGESTVNEALVTGESAAVTKNVGDKVIGGATNNNGTLTVKISGTGDSGYLSQVMKMVQNAQQAKSKAEDKADLVAKYLFYAALGVGIIAFFAWLPQGLATAMTIMVTVFVIACPHALGLAIPLVVSRSTTIGAQNGLLVRNRQAIEASQHVSHVLLDKTGTLTEGKFTVNALIPNDGIDETTLLSRLAALENNSTHPLAQAIITEAQAKDIEVVAAEKSQNIPGVGISGNVDGTDYTIANGNYLTKQGIRFDEAAADKWAAKGNSVSFLLQGTQVQGMVAEGDTIKAGARELISGLQRRGITPVMLTGDNPKAAEHVANLLGLTEFHAGLLPDDKQKIIADYQAKGNHVIMVGDGVNDAPSLAAADIGIAIGAGTDVAIDSADVVLVKSEPSDILHFLDLAKITNRKMVQNLWWGAGYNIVAIPLAAGVLSFIGIILDPAVGAAVMAMSTIIVAINAMGLTGEKIKNV
SIO_010081: LM596_RS12515
subclass of: SO_0000673
so part of: LM596_RS12515
location: 7391..9637
location: region:7391-9637:1
so has part: feature:7391-9637:1:exon

WP_010078397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7391-9637:1:exon

LM596_RS12520
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12520
old locus tag: LM596_12520
so part of: sequence
location: 9687..9851
location: region:9687-9851:1
so has part: feature:9687-9851:1:exon
subclass of: SO_0000010

position:9687:1
position: 9687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9851:1
position: 9851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9687-9851:1:exon

LM596_RS12520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12520
old locus tag: LM596_12520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004898347.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2933 domain-containing protein
translation: MSQWILIALFLLAHPLMMLFMHKGMHGGSGSMGGCGNNTQQNSNNTEKPRKKVN
SIO_010081: LM596_RS12520
subclass of: SO_0000673
so part of: LM596_RS12520
location: 9687..9851
location: region:9687-9851:1
so has part: feature:9687-9851:1:exon

WP_003688746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9687-9851:1:exon

LM596_RS12525
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12525
old locus tag: LM596_12525
so part of: sequence
location: 9869..10165
location: region:9869-10165:1
so has part: feature:9869-10165:1:exon
subclass of: SO_0000010

position:9869:1
position: 9869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10165:1
position: 10165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9869-10165:1:exon

LM596_RS12525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12525
old locus tag: LM596_12525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002817475.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKILTGSRGDEVHEHLYENGQRRVGHRILKKNTVTNNGEFHPVPGNIVLIPLKGTVKLTTPDQECTIKNGQLAILGPTDSFYLTAIDDVEFVGVVDIK
SIO_010081: LM596_RS12525
subclass of: SO_0000673
so part of: LM596_RS12525
location: 9869..10165
location: region:9869-10165:1
so has part: feature:9869-10165:1:exon

WP_002817475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9869-10165:1:exon

LM596_RS12535
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12535
old locus tag: LM596_12535
so part of: sequence
location: 10323..10745
location: region:10323-10745:1
so has part: feature:10323-10745:1:exon
subclass of: SO_0000010

position:10323:1
position: 10323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10745:1
position: 10745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10323-10745:1:exon

LM596_RS12535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12535
old locus tag: LM596_12535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002817477.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrodipicolinate synthase family protein
translation: MLTLIQAVVMNRIGIKQCGSDEELAAIVEKAPKDFLVYTGEDAQSLTTLVLGGQGTISVASHLFGNEMATMRRALNHGDITQAGQIQRRLMPKMAALFTQPSPAPVKAALNAQHWLVGSTRLPILPLTTNEQSQLLNSLK
SIO_010081: LM596_RS12535
subclass of: SO_0000673
so part of: LM596_RS12535
location: 10323..10745
location: region:10323-10745:1
so has part: feature:10323-10745:1:exon

WP_003688748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10323-10745:1:exon

LM596_RS13220
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS13220
old locus tag: LM596_12540
so part of: sequence
location: 10816..10950
location: region:10816-10950:1
so has part: feature:10816-10950:1:exon
subclass of: SO_0000010

position:10816:1
position: 10816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10950:1
position: 10950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10816-10950:1:exon

LM596_RS13220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS13220
old locus tag: LM596_12540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003645890.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMCGWAFTGGMPFMWMGGGLGIISLLILLAVGAYFLGTRSRHHD
SIO_010081: LM596_RS13220
subclass of: SO_0000673
so part of: LM596_RS13220
location: 10816..10950
location: region:10816-10950:1
so has part: feature:10816-10950:1:exon

WP_003645890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10816-10950:1:exon

LM596_RS12545
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12545
old locus tag: LM596_12545
pseudo: true
so part of: sequence
location: complement(11028..>11354)
location: region:11028-11354:-1
so has part: feature:11028-11354:-1:exon
subclass of: SO_0000010

position:11028:-1
position: 11028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11354:-1
position: 11354
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11028-11354:-1:exon

LM596_RS12545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12545
old locus tag: LM596_12545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611112.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LM596_RS12545
subclass of: SO_0000673
so part of: LM596_RS12545
location: complement(11028..>11354)
location: region:11028-11354:-1
so has part: feature:11028-11354:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11028-11354:-1:exon

LM596_RS12550
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12550
old locus tag: LM596_12550
so part of: sequence
location: 11443..11730
location: region:11443-11730:1
so has part: feature:11443-11730:1:exon
subclass of: SO_0000010

position:11443:1
position: 11443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11730:1
position: 11730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11443-11730:1:exon

LM596_RS12550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12550
old locus tag: LM596_12550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015638790.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
SIO_010081: LM596_RS12550
subclass of: SO_0000673
so part of: LM596_RS12550
location: 11443..11730
location: region:11443-11730:1
so has part: feature:11443-11730:1:exon

WP_003688751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11443-11730:1:exon

LM596_RS12555
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12555
old locus tag: LM596_12555
so part of: sequence
location: 11754..12632
location: region:11754-12632:1
so has part: feature:11754-12632:1:exon
subclass of: SO_0000010

position:11754:1
position: 11754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12632:1
position: 12632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11754-12632:1:exon

LM596_RS12555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12555
old locus tag: LM596_12555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680947.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWHKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELGIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLIEKTKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTQIQNLVVA
SIO_010081: LM596_RS12555
subclass of: SO_0000673
so part of: LM596_RS12555
location: 11754..12632
location: region:11754-12632:1
so has part: feature:11754-12632:1:exon

WP_003688752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11754-12632:1:exon

LM596_RS12560
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12560
old locus tag: LM596_12560
pseudo: true
so part of: sequence
location: <12683..13093
location: region:12683-13093:1
so has part: feature:12683-13093:1:exon
subclass of: SO_0000010

position:12683:1
position: 12683
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:13093:1
position: 13093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12683-13093:1:exon

LM596_RS12560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12560
old locus tag: LM596_12560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013355080.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: LM596_RS12560
subclass of: SO_0000673
so part of: LM596_RS12560
location: <12683..13093
location: region:12683-13093:1
so has part: feature:12683-13093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12683-13093:1:exon

LM596_RS12565
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12565
old locus tag: LM596_12565
so part of: sequence
location: complement(13158..14084)
location: region:13158-14084:-1
so has part: feature:13158-14084:-1:exon
subclass of: SO_0000010

position:13158:-1
position: 13158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14084:-1
position: 14084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13158-14084:-1:exon

LM596_RS12565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12565
old locus tag: LM596_12565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003688755.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione S-transferase C-terminal domain-containing protein
translation: MTENLTCEFQPKQPTTVTQSTVTIDKRFSTNELPVEAGRYRLILGRFCPWATQVAIEIDYLGLDQVISKGVIYPLRRNGIQTDWWFGERDDFADPVLKTTRLSQNYQKALPSFEGRSSVPALVDIKTGKVVNNVTNTLLDELALKWGRYANEKQIEFFPQTRIGEFKTAAADILENINRLPGKITTVKSQAEYEKLVQIFFDHLAKFDQVLRQQKYLWGDKLTQLDVRLYVTLLRFDLVYYYQNKLSLHRLTDYPALWAYAKRLAQIPAFKNYTDFEDIKKHFYQQDDRPITTFERVIPLLDEQKWLS
SIO_010081: LM596_RS12565
subclass of: SO_0000673
so part of: LM596_RS12565
location: complement(13158..14084)
location: region:13158-14084:-1
so has part: feature:13158-14084:-1:exon

WP_003688755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13158-14084:-1:exon

LM596_RS12570
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12570
old locus tag: LM596_12570
pseudo: true
so part of: sequence
location: <14182..14571
location: region:14182-14571:1
so has part: feature:14182-14571:1:exon
subclass of: SO_0000010

position:14182:1
position: 14182
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:14571:1
position: 14571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14182-14571:1:exon

LM596_RS12570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12570
old locus tag: LM596_12570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002328814.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: LM596_RS12570
subclass of: SO_0000673
so part of: LM596_RS12570
location: <14182..14571
location: region:14182-14571:1
so has part: feature:14182-14571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14182-14571:1:exon

LM596_RS12580
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12580
old locus tag: LM596_12580
pseudo: true
so part of: sequence
location: 14906..>15076
location: region:14906-15076:1
so has part: feature:14906-15076:1:exon
subclass of: SO_0000010

position:14906:1
position: 14906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15076:1
position: 15076
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14906-15076:1:exon

LM596_RS12580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12580
old locus tag: LM596_12580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680034.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: LM596_RS12580
subclass of: SO_0000673
so part of: LM596_RS12580
location: 14906..>15076
location: region:14906-15076:1
so has part: feature:14906-15076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14906-15076:1:exon

LM596_RS12585
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12585
old locus tag: LM596_12585
so part of: sequence
location: 15784..17175
location: region:15784-17175:1
so has part: feature:15784-17175:1:exon
subclass of: SO_0000010

position:15784:1
position: 15784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17175:1
position: 17175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15784-17175:1:exon

LM596_RS12585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12585
old locus tag: LM596_12585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003690776.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MNDLTKGKPLKLIFWFTVPLLIGNIFQQFYSLSDTLIVGQTLGVKALAAVGSTGSVQFLIIGFAQGLTAGLSILTAQHFGARDFKAVRRSFAISIVVSLIVGIILTVLSLIFVDHILLLMQTPTDIIADARTFLQIMLGGMLAPIGFNLLSNIIRALGDSRTPLWFLIISALINIGLELLFILVFKWGIAGASWATILAQAIATLMCVVYIMVKVPILHIGWRHFKLVWAEVRAHLNVGLPMAFQMSIIAIGTIVLQAALNSLGTNSVAATTAAQKIDQLATQPLMSFGVTMATFAAQNYGAYKYERIITGVKQTMWLSGSFSVVAGLIEIIWGKQLVGFFVGHQDVAVLNLSQTYFNVIGSTYLLLSMLFIMRNTLQGLGRSAIPTLAGAAELFMRVFAALILVRLLGYAGACSSEPLAWLGSCAVLLPAYIKSVRDLRLQERMTTVVAEEPTPILADSDNS
SIO_010081: LM596_RS12585
subclass of: SO_0000673
so part of: LM596_RS12585
location: 15784..17175
location: region:15784-17175:1
so has part: feature:15784-17175:1:exon

WP_003690776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15784-17175:1:exon

LM596_RS12590
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12590
old locus tag: LM596_12590
pseudo: true
so part of: sequence
location: <17235..17309
location: region:17235-17309:1
so has part: feature:17235-17309:1:exon
subclass of: SO_0000010

position:17235:1
position: 17235
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:17309:1
position: 17309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17235-17309:1:exon

LM596_RS12590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12590
old locus tag: LM596_12590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011241732.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: LM596_RS12590
subclass of: SO_0000673
so part of: LM596_RS12590
location: <17235..17309
location: region:17235-17309:1
so has part: feature:17235-17309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17235-17309:1:exon

LM596_RS12595
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12595
old locus tag: LM596_12595
so part of: sequence
location: 17523..18452
location: region:17523-18452:1
so has part: feature:17523-18452:1:exon
subclass of: SO_0000010

position:17523:1
position: 17523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18452:1
position: 18452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17523-18452:1:exon

LM596_RS12595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12595
old locus tag: LM596_12595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30-like element ISLpl1 family transposase
translation: MSSITYSERIKIETFCELGLSNIQMGVRLNRSPSTISYELSRCQPYQAELAQTDAEYKQSRCGRKTKLSDELKQKILNHLRLSWSPKMIAHEFKLATKSIYNWLNQGRIGFSLNDLPEHGVRKRRNVDQRSKYNQSLGRSIEQRPMMINQRNRIGDFELATVVGPRGHSKAVLLTLIDRKSRFLWAYRLKDRTTATVNEALTKFLTTFNGPVHSFTVDRGTEFSGLVSLESQYGIKTYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVMLTNLSKNSD
SIO_010081: LM596_RS12595
subclass of: SO_0000673
so part of: LM596_RS12595
location: 17523..18452
location: region:17523-18452:1
so has part: feature:17523-18452:1:exon

WP_010078393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17523-18452:1:exon

LM596_RS12600
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12600
old locus tag: LM596_12600
so part of: sequence
location: 18910..19137
location: region:18910-19137:1
so has part: feature:18910-19137:1:exon
subclass of: SO_0000010

position:18910:1
position: 18910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19137:1
position: 19137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18910-19137:1:exon

LM596_RS12600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12600
old locus tag: LM596_12600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003687815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: general stress protein
translation: MIENAREKAGRKGGKATAKSHDKNFYEKLGEKGGEKTAKTHDKDFYRENGKKMCPKLVVVRLKYTSDWGNLPPAK
SIO_010081: LM596_RS12600
subclass of: SO_0000673
so part of: LM596_RS12600
location: 18910..19137
location: region:18910-19137:1
so has part: feature:18910-19137:1:exon

WP_003687815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18910-19137:1:exon

LM596_RS12875
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12875
so part of: sequence
location: 19227..19367
location: region:19227-19367:1
so has part: feature:19227-19367:1:exon
subclass of: SO_0000010

position:19227:1
position: 19227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19367:1
position: 19367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19227-19367:1:exon

LM596_RS12875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLTNYALKNSRLTKVDLDNNSAIWRKLVDPSKAELSFISKKNGNQ
SIO_010081: LM596_RS12875
subclass of: SO_0000673
so part of: LM596_RS12875
location: 19227..19367
location: region:19227-19367:1
so has part: feature:19227-19367:1:exon

WP_156648670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19227-19367:1:exon

LM596_RS13130
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS13130
so part of: sequence
location: 19312..19689
location: region:19312-19689:1
so has part: feature:19312-19689:1:exon
subclass of: SO_0000010

position:19312:1
position: 19312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19689:1
position: 19689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19312-19689:1:exon

LM596_RS13130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS13130
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIQAKLNYHLFLKKMGINEDVLTGLITNDDTRCEEISSTETPFVLLLVLLFPDISHVNLKLDNLISNVFIFILSDEIITLFNYSFSNILENVQKETAHQNNESSMYIALKLILLAYKRCYLTCAR
SIO_010081: LM596_RS13130
subclass of: SO_0000673
so part of: LM596_RS13130
location: 19312..19689
location: region:19312-19689:1
so has part: feature:19312-19689:1:exon

WP_240143901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19312-19689:1:exon

LM596_RS13135
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS13135
pseudo: true
so part of: sequence
location: 19719..20185
location: region:19719-20185:1
so has part: feature:19719-20185:1:exon
subclass of: SO_0000010

position:19719:1
position: 19719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20185:1
position: 20185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19719-20185:1:exon

LM596_RS13135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS13135
inference: COORDINATES: protein motif:HMM:NF013694.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CorA family divalent cation transporter
SIO_010081: LM596_RS13135
subclass of: SO_0000673
so part of: LM596_RS13135
location: 19719..20185
location: region:19719-20185:1
so has part: feature:19719-20185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19719-20185:1:exon

LM596_RS12610
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12610
old locus tag: LM596_12610
so part of: sequence
location: 20378..20596
location: region:20378-20596:1
so has part: feature:20378-20596:1:exon
subclass of: SO_0000010

position:20378:1
position: 20378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20596:1
position: 20596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20378-20596:1:exon

LM596_RS12610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12610
old locus tag: LM596_12610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003687813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPWNEQNYPPSMKNLKKVVRKKAIEIANALKEKNYDDKRAISIAMEQAEKWYQHRSDLKDDTPFKKNLRRHS
SIO_010081: LM596_RS12610
subclass of: SO_0000673
so part of: LM596_RS12610
location: 20378..20596
location: region:20378-20596:1
so has part: feature:20378-20596:1:exon

WP_003687813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20378-20596:1:exon

LM596_RS12880
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12880
so part of: sequence
location: 20596..20772
location: region:20596-20772:1
so has part: feature:20596-20772:1:exon
subclass of: SO_0000010

position:20772:1
position: 20772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20596-20772:1:exon

LM596_RS12880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MISLLEKHPNKITPHIPIEKPKKQLPQRFPVKTPPENPQINPEKIYPEKQPEEPVRRD
SIO_010081: LM596_RS12880
subclass of: SO_0000673
so part of: LM596_RS12880
location: 20596..20772
location: region:20596-20772:1
so has part: feature:20596-20772:1:exon

WP_020090529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20596-20772:1:exon

LM596_RS12615
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12615
old locus tag: LM596_12615
so part of: sequence
location: 20953..21405
location: region:20953-21405:1
so has part: feature:20953-21405:1:exon
subclass of: SO_0000010

position:20953:1
position: 20953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21405:1
position: 21405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20953-21405:1:exon

LM596_RS12615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12615
old locus tag: LM596_12615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002344507.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF305 domain-containing protein
translation: MKQYTKFLLMILVSTVIMYGLMYLNVFQLDHIFLSQTRLYMALIMGATMAIVMLLFMWSMYQNKRLNRLILLGSAVIFAGSLYLVRSQATVHDAAWLQEMIPHHSTAILTSERAQLSDPEVKALAQKIAKTQREEITEMKRLLKKLPINS
SIO_010081: LM596_RS12615
subclass of: SO_0000673
so part of: LM596_RS12615
location: 20953..21405
location: region:20953-21405:1
so has part: feature:20953-21405:1:exon

WP_152134804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20953-21405:1:exon

LM596_RS12620
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12620
old locus tag: LM596_12620
pseudo: true
so part of: sequence
location: complement(21540..22593)
location: region:21540-22593:-1
so has part: feature:21540-22593:-1:exon
subclass of: SO_0000010

position:21540:-1
position: 21540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22593:-1
position: 22593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21540-22593:-1:exon

LM596_RS12620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12620
old locus tag: LM596_12620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010579556.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: LM596_RS12620
subclass of: SO_0000673
so part of: LM596_RS12620
location: complement(21540..22593)
location: region:21540-22593:-1
so has part: feature:21540-22593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21540-22593:-1:exon

LM596_RS12625
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12625
old locus tag: LM596_12625
so part of: sequence
location: complement(22722..23072)
location: region:22722-23072:-1
so has part: feature:22722-23072:-1:exon
subclass of: SO_0000010

position:22722:-1
position: 22722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23072:-1
position: 23072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22722-23072:-1:exon

LM596_RS12625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12625
old locus tag: LM596_12625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003688415.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5388 domain-containing protein
translation: MSNLLQHKNDDNEKKIDKNVDVKTKSISRQDVGFTDIEKDVIPTFDVSVRLDNHSRNALMALAKTTAEKRTISEMLSIMIEDYTKQLSSNTITAYTEYLSALEAKDKLSYKLKNHK
SIO_010081: LM596_RS12625
subclass of: SO_0000673
so part of: LM596_RS12625
location: complement(22722..23072)
location: region:22722-23072:-1
so has part: feature:22722-23072:-1:exon

WP_003688415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22722-23072:-1:exon

LM596_RS12630
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12630
old locus tag: LM596_12630
so part of: sequence
location: complement(23074..23874)
location: region:23074-23874:-1
so has part: feature:23074-23874:-1:exon
subclass of: SO_0000010

position:23074:-1
position: 23074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23874:-1
position: 23874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23074-23874:-1:exon

LM596_RS12630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12630
old locus tag: LM596_12630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004562667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIISCANEKGGTGKTSTTALLGWELASLGHSTLLVDCDPQSNLTDLMIKTKSQENTEITIDPSLFALLINHRDLKEGIIRIKDNLSLLPVASDMNLFSRWVDKQELTEKEKVTYLKEALGSIKKDYDFIFLDVSPTMSLTNDNVFMACDWLIIMLQTQQRSLLGAKSFLEYLQTNLINMFDSKVDVLGILPVLTKGQSKIDNSVLKSAISEFGENNLFTNVITAMERVKRFDLTGITEDHKNVWDKATHSVYTAVAKELVNRLGVK
SIO_010081: LM596_RS12630
subclass of: SO_0000673
so part of: LM596_RS12630
location: complement(23074..23874)
location: region:23074-23874:-1
so has part: feature:23074-23874:-1:exon

WP_003688413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23074-23874:-1:exon

LM596_RS12640
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12640
old locus tag: LM596_12640
pseudo: true
so part of: sequence
location: 24865..>25035
location: region:24865-25035:1
so has part: feature:24865-25035:1:exon
subclass of: SO_0000010

position:24865:1
position: 24865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25035:1
position: 25035
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24865-25035:1:exon

LM596_RS12640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12640
old locus tag: LM596_12640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680034.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: LM596_RS12640
subclass of: SO_0000673
so part of: LM596_RS12640
location: 24865..>25035
location: region:24865-25035:1
so has part: feature:24865-25035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24865-25035:1:exon

LM596_RS12645
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12645
old locus tag: LM596_12645
pseudo: true
so part of: sequence
location: 25743..27133
location: region:25743-27133:1
so has part: feature:25743-27133:1:exon
subclass of: SO_0000010

position:25743:1
position: 25743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27133:1
position: 27133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25743-27133:1:exon

LM596_RS12645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12645
old locus tag: LM596_12645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003690776.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MATE family efflux transporter
SIO_010081: LM596_RS12645
subclass of: SO_0000673
so part of: LM596_RS12645
location: 25743..27133
location: region:25743-27133:1
so has part: feature:25743-27133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25743-27133:1:exon

LM596_RS12650
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12650
old locus tag: LM596_12650
so part of: sequence
location: 27480..28409
location: region:27480-28409:1
so has part: feature:27480-28409:1:exon
subclass of: SO_0000010

position:27480:1
position: 27480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28409:1
position: 28409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27480-28409:1:exon

LM596_RS12650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12650
old locus tag: LM596_12650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30-like element ISLpl1 family transposase
translation: MSSITYSERIKIETFCELGLSNIQMGVRLNRSPSTISYELSRCQPYQAELAQTDAEYKQSRCGRKTKLSDELKQKILNHLRLSWSPKMIAHEFKLATKSIYNWLNQGRIGFSLNDLPEHGVRKRRNVDQRSKYNQSLGRSIEQRPMMINQRNRIGDFELATVVGPRGHSKAVLLTLIDRKSRFLWAYRLKDRTTATVNEALTKFLTTFNGPVHSFTVDRGTEFSGLVSLESQYGIKTYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVMLTNLSKNSD
SIO_010081: LM596_RS12650
subclass of: SO_0000673
so part of: LM596_RS12650
location: 27480..28409
location: region:27480-28409:1
so has part: feature:27480-28409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27480-28409:1:exon

LM596_RS12655
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12655
old locus tag: LM596_12655
so part of: sequence
location: 28867..29094
location: region:28867-29094:1
so has part: feature:28867-29094:1:exon
subclass of: SO_0000010

position:28867:1
position: 28867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29094:1
position: 29094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28867-29094:1:exon

LM596_RS12655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12655
old locus tag: LM596_12655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003687815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: general stress protein
translation: MIENAREKAGRKGGKATAKSHDKNFYEKLGEKGGEKTAKTHDKDFYRENGKKMCPKLVVVRLKYTSDWGNLPPAK
SIO_010081: LM596_RS12655
subclass of: SO_0000673
so part of: LM596_RS12655
location: 28867..29094
location: region:28867-29094:1
so has part: feature:28867-29094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28867-29094:1:exon

LM596_RS12885
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12885
so part of: sequence
location: 29185..29325
location: region:29185-29325:1
so has part: feature:29185-29325:1:exon
subclass of: SO_0000010

position:29185:1
position: 29185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29325:1
position: 29325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29185-29325:1:exon

LM596_RS12885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLTNYALKNSRLTKVDLDNNSAIWRKLVDPSKAELSFISKKNGNQ
SIO_010081: LM596_RS12885
subclass of: SO_0000673
so part of: LM596_RS12885
location: 29185..29325
location: region:29185-29325:1
so has part: feature:29185-29325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29185-29325:1:exon

LM596_RS12660
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12660
old locus tag: LM596_12660
pseudo: true
so part of: sequence
location: 29312..30144
location: region:29312-30144:1
so has part: feature:29312-30144:1:exon
subclass of: SO_0000010

position:29312:1
position: 29312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30144:1
position: 30144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29312-30144:1:exon

LM596_RS12660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12660
old locus tag: LM596_12660
inference: COORDINATES: protein motif:HMM:NF013694.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CorA family divalent cation transporter
SIO_010081: LM596_RS12660
subclass of: SO_0000673
so part of: LM596_RS12660
location: 29312..30144
location: region:29312-30144:1
so has part: feature:29312-30144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29312-30144:1:exon

LM596_RS12665
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12665
old locus tag: LM596_12665
so part of: sequence
location: 30336..30509
location: region:30336-30509:1
so has part: feature:30336-30509:1:exon
subclass of: SO_0000010

position:30336:1
position: 30336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30509:1
position: 30509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30336-30509:1:exon

LM596_RS12665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12665
old locus tag: LM596_12665
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPWNEQNYPPSMKNLKKVVRKKLLRSQMRLKKKIMTISGPFQLLWNKRKNGINIALI
SIO_010081: LM596_RS12665
subclass of: SO_0000673
so part of: LM596_RS12665
location: 30336..30509
location: region:30336-30509:1
so has part: feature:30336-30509:1:exon

WP_240143900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30336-30509:1:exon

LM596_RS12890
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12890
so part of: sequence
location: 30553..30729
location: region:30553-30729:1
so has part: feature:30553-30729:1:exon
subclass of: SO_0000010

position:30553:1
position: 30553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30729:1
position: 30729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30553-30729:1:exon

LM596_RS12890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MISLLEKHPNKITPHIPIEKPKKQLPQRFPVKTPPENPQINPEKIYPEKQPEEPVRRD
SIO_010081: LM596_RS12890
subclass of: SO_0000673
so part of: LM596_RS12890
location: 30553..30729
location: region:30553-30729:1
so has part: feature:30553-30729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30553-30729:1:exon

LM596_RS12670
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12670
old locus tag: LM596_12670
so part of: sequence
location: 30910..31359
location: region:30910-31359:1
so has part: feature:30910-31359:1:exon
subclass of: SO_0000010

position:30910:1
position: 30910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31359:1
position: 31359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30910-31359:1:exon

LM596_RS12670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12670
old locus tag: LM596_12670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010012305.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF305 domain-containing protein
translation: MKQYTKFLLMILVSTVIMYGLMYLNVFQLDHIFLSQTRLYMALIMGATMAIVMLLFMWSMYQNKRLNRLILLGSAVIFAGSLYLVRSQATVHDAAWLQEMIPHHSTAILTSERAQLSDPEVKALAQKIAKTQREEITEMKRLLKKVADQ
SIO_010081: LM596_RS12670
subclass of: SO_0000673
so part of: LM596_RS12670
location: 30910..31359
location: region:30910-31359:1
so has part: feature:30910-31359:1:exon

WP_029327463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30910-31359:1:exon

LM596_RS12675
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12675
old locus tag: LM596_12675
pseudo: true
so part of: sequence
location: complement(31498..32551)
location: region:31498-32551:-1
so has part: feature:31498-32551:-1:exon
subclass of: SO_0000010

position:31498:-1
position: 31498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32551:-1
position: 32551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31498-32551:-1:exon

LM596_RS12675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12675
old locus tag: LM596_12675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010579556.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: LM596_RS12675
subclass of: SO_0000673
so part of: LM596_RS12675
location: complement(31498..32551)
location: region:31498-32551:-1
so has part: feature:31498-32551:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31498-32551:-1:exon

LM596_RS12680
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12680
old locus tag: LM596_12680
so part of: sequence
location: complement(32681..33031)
location: region:32681-33031:-1
so has part: feature:32681-33031:-1:exon
subclass of: SO_0000010

position:32681:-1
position: 32681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33031:-1
position: 33031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32681-33031:-1:exon

LM596_RS12680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12680
old locus tag: LM596_12680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003688415.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5388 domain-containing protein
translation: MSNLLQHKNDDNEKKIDKNVDVKTKSISRQDVGFTDIEKDVIPTFDVSVRLDNHSRNALMALAKTTAEKRTISEMLSIMIEDYTKQLSSNTITAYTEYLSALEAKDKLSYKLKNHK
SIO_010081: LM596_RS12680
subclass of: SO_0000673
so part of: LM596_RS12680
location: complement(32681..33031)
location: region:32681-33031:-1
so has part: feature:32681-33031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32681-33031:-1:exon

LM596_RS12685
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12685
old locus tag: LM596_12685
so part of: sequence
location: complement(33033..33833)
location: region:33033-33833:-1
so has part: feature:33033-33833:-1:exon
subclass of: SO_0000010

position:33033:-1
position: 33033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33833:-1
position: 33833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33033-33833:-1:exon

LM596_RS12685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12685
old locus tag: LM596_12685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004562667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIISCANEKGGTGKTSTTALLGWELASLGHSTLLVDCDPQSNLTDLMIKTKSQENTEITIDPSLFALLINHRDLKEGIIRIKDNLSLLPVASDMNLFSRWVDKQELTEKEKVTYLKEALGSIKKDYDFIFLDVSPTMSLTNDNVFMACDWLIIMLQTQQRSLLGAKSFLEYLQTNLINMFDSKVDVLGILPVLTKGQSKIDNSVLKSAISEFGENNLFTNVITAMERVKRFDLTGITEDHKNVWDKATHSVYTAVAKELVNRLGVK
SIO_010081: LM596_RS12685
subclass of: SO_0000673
so part of: LM596_RS12685
location: complement(33033..33833)
location: region:33033-33833:-1
so has part: feature:33033-33833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33033-33833:-1:exon

LM596_RS12690
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12690
old locus tag: LM596_12690
so part of: sequence
location: 35221..37869
location: region:35221-37869:1
so has part: feature:35221-37869:1:exon
subclass of: SO_0000010

position:35221:1
position: 35221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37869:1
position: 37869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35221-37869:1:exon

LM596_RS12690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12690
old locus tag: LM596_12690
inference: COORDINATES: protein motif:HMM:NF021897.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF853 family protein
translation: MRVGLTEKRYLVLNVLDKLGIATVDQIMRLTSFNKSTIYYALKEFEKKDLIKKFKSMQQAVYLITKLGSEVIGDLNFGFSKDERNPNFAIFRHSMLINESVIFYKDQFAERAKFEMERELIAQIISQGSQRREQIVNLPDFVIETEDTRQAVEVELTRKRAAKITKKLVNYKKFIIEGQYTHLIYLYQSLAIRRLVAKCAADVGIEVTFGNLDEMLRGMCMFDFQKQDNSKKERTTSDEEIGSFIAWMFYGLFLLAAIGIFLPALVIALVVGSLAASSHKLKWLSFVSGISLILLIMLLLRFKIGALFQFLGLYQKILPSKLMHFFENVFNNGNTFSIDWYNWILMIFLGLVMALLVGIIIKKLVTNYFVNVKEEQSSRFLNSGRYRNIFKKRLSITNKQQEKWRKDTKNINLYLGIDIKGNAIELPIKQLFTHELIQGTTGSGKTVVMLAQAEACMKAGLPVIYVEAKGDPQIEHDLGKLATKYGRKFKIFSDNTETTYNPIKNGSPSGVEERLMSVFDWSEPFYKNVSDNMLLKVIKFMDTYGIKRDLPTLLEYLDFDNIWETLKSDSIRREVNVKRKVKTKDGKTGDTGLVGIGKMAEKAKYIEKKIVVYDLSEKAKKYTKLFFGKENFDDEDFKEFKENEANVMKNIYGLKIQIELLVISDLGYKLSETENSIDMTRFLETDDIVLFSFNSNNYGSLIPKLGRFVVSDVATAVTQKFNKSEFKGAVGFFDEWGSYANEKIIDVLAKARSAKFGAVLGVQSMEDLNTNGEGLDKRIRDNVNTFMLGRSNDPESADYVANLVGTYEDLDKTIMTEDKGSVFARIDTKSARGTIRSVNKFVVKPDNIKRLEDHSFYLITKGAKNEEEYARKVYTRNTMQGL
SIO_010081: LM596_RS12690
subclass of: SO_0000673
so part of: LM596_RS12690
location: 35221..37869
location: region:35221-37869:1
so has part: feature:35221-37869:1:exon

WP_152134805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35221-37869:1:exon

LM596_RS12695
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12695
old locus tag: LM596_12695
so part of: sequence
location: 38286..40490
location: region:38286-40490:1
so has part: feature:38286-40490:1:exon
subclass of: SO_0000010

position:38286:1
position: 38286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40490:1
position: 40490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38286-40490:1:exon

LM596_RS12695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12695
old locus tag: LM596_12695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003690893.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1906 domain-containing protein
translation: MDQMVLETQQWLNKTYGGVSGFGSVTEDGLTGWGTVYGLTRALQHELGITGLVNNFGPTSKQLFNNIASTIVVGYTGNIAYIIQGGFWCKGITPGEFDGKFSADTASAVTTMKTKAGLADTSSSVDGNFMAALLNMSSFDLLAAGDAKVREMQQQLNHDYLAYTGILPCDGIYQRDTNSALIYALQAEEKISTSVATGAYGATTKKDTPTVKEGTTNNFVRILQWGLYVNNKAYTGAFDGVYDSAVVVAVKEFEETMALDSTDGTSAGVDIFMSLLTSAGNPDRSAIACDTSYQLNATRVATLKNAGYSIVGRYLTGTVGSGTSERAKNLTTDEITAITTGGLKIFPIYQDGASDKEAYFTAAQGKTDGTKAVYAAQDLGFKEGVVIYFAVDADIQAGDIAGSAKVYFEALYDIVTSYGYEVGIYGTRNVSATIISAGLATKAFISDMSTGYSGNLGYSIPDEWAFDQFSEISIGDFAIDKDATTSARETATGSFGVGGESGYGNAEDLAKINTIIDALSQQKDFSYLSGLKIEKTSKEYEIPGFAVDFYVQVKFEASVSEPGDNVGVVYNVSNGKFESDFTDTIAGVVALSDEINKEDINSALTELSSLINNGQIWVEPVTKGSDAGIALHIKSTFDHTLDSGETIELEYEIIIDEIFHKIEVVPTGVPNTTANDYNSLFPNGIKEFVGFSIVAGLATGGIYYVVTAVGATAAVVTTSILALIALLKNNDTGV
SIO_010081: LM596_RS12695
subclass of: SO_0000673
so part of: LM596_RS12695
location: 38286..40490
location: region:38286-40490:1
so has part: feature:38286-40490:1:exon

WP_003690893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38286-40490:1:exon

LM596_RS12700
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12700
old locus tag: LM596_12700
so part of: sequence
location: complement(40487..41053)
location: region:40487-41053:-1
so has part: feature:40487-41053:-1:exon
subclass of: SO_0000010

position:40487:-1
position: 40487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41053:-1
position: 41053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40487-41053:-1:exon

LM596_RS12700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12700
old locus tag: LM596_12700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003690894.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTNQLTILLLAISGMCAIFFFILLFKMTHLQKELKEMMLKFNQLTVKFKKDNSNNDEDISQLLSIVTYNPAKLLPLIVILNMIPTLVLLAYFNFKTSQYFVYTLLLCFIAAALLLPIYYLYLKKSIANFSLKSKSLKNNTSLSKLISEFDSKLLPVIEKKTFNTLYAFQFLNIAMICCTLLKIILRF
SIO_010081: LM596_RS12700
subclass of: SO_0000673
so part of: LM596_RS12700
location: complement(40487..41053)
location: region:40487-41053:-1
so has part: feature:40487-41053:-1:exon

WP_003690894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40487-41053:-1:exon

LM596_RS12705
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12705
old locus tag: LM596_12705
so part of: sequence
location: complement(41387..42456)
location: region:41387-42456:-1
so has part: feature:41387-42456:-1:exon
subclass of: SO_0000010

position:41387:-1
position: 41387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42456:-1
position: 42456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41387-42456:-1:exon

LM596_RS12705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12705
old locus tag: LM596_12705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558186.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3-like element IS1163 family transposase
translation: MKRYQDDFKASIVKLHREEKRSIRSLSEEYGVSPAVIHNWVKGAKSVELEDGTEVTSKEFKQLQKENQRLKEELEIFKSCGGVTGKALGRINCLVFIEDQLLRHRLSIILSALKLPRSTYYHWKRYQPSQHERVDNQLKEKIKLIWENNYRAYGYPRITMVLRKSGICVGSKRILRLMREMEIHSLMNRRFKKPGTHVDHSQRHNLIKHQPNARIWRADITYLELRPGTWVYLSSIYEPKVHQVLAFKIGRQMEATLVVETINQALECHQKPQYFHSDMGSQYTSNEVETLLERHQISHSYSKQGYPYDNGPIEAFHSLLKREFAFQTTFSNFEDLVIRTSNYISWFNSDRIRTSV
SIO_010081: LM596_RS12705
subclass of: SO_0000673
so part of: LM596_RS12705
location: complement(join(41387..42228,42228..42456))
location: region:41387-42456:-1
so has part: feature:42228-42456:-1:exon
so has part: feature:41387-42228:-1:exon

WP_152134806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42228-42456:-1:exon

position:42228:-1
position: 42228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41387-42228:-1:exon

LM596_RS12710
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12710
old locus tag: LM596_12710
pseudo: true
so part of: sequence
location: <42533..43186
location: region:42533-43186:1
so has part: feature:42533-43186:1:exon
subclass of: SO_0000010

position:42533:1
position: 42533
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:43186:1
position: 43186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42533-43186:1:exon

LM596_RS12710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12710
old locus tag: LM596_12710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005728424.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: plasmid replication initiation protein
SIO_010081: LM596_RS12710
subclass of: SO_0000673
so part of: LM596_RS12710
location: <42533..43186
location: region:42533-43186:1
so has part: feature:42533-43186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42533-43186:1:exon

LM596_RS12715
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12715
old locus tag: LM596_12715
so part of: sequence
location: 43341..43538
location: region:43341-43538:1
so has part: feature:43341-43538:1:exon
subclass of: SO_0000010

position:43341:1
position: 43341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43538:1
position: 43538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43341-43538:1:exon

LM596_RS12715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12715
old locus tag: LM596_12715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003691009.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKPSKEIETIDQLLADPWAVNIQDIWEQTAYNPDPDKRKLFDALHTYLLDKSQEQIINEKHFVI
SIO_010081: LM596_RS12715
subclass of: SO_0000673
so part of: LM596_RS12715
location: 43341..43538
location: region:43341-43538:1
so has part: feature:43341-43538:1:exon

WP_003691009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43341-43538:1:exon

LM596_RS12720
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12720
old locus tag: LM596_12720
so part of: sequence
location: 43673..44224
location: region:43673-44224:1
so has part: feature:43673-44224:1:exon
subclass of: SO_0000010

position:43673:1
position: 43673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44224:1
position: 44224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43673-44224:1:exon

LM596_RS12720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12720
old locus tag: LM596_12720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003691010.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MGGDWHKERDNFRAMLEEIKQLHAALDTGQSIHIETTLAGQGRAQFNLIDRAHKNGFEVTLLYVALKNEKVAINRVHERVKKGGHGVPDEVVKKRYNQSNHNLAAVAFKADNVVIYDNSQKFVSVYRREHDQVIKNNLRDFPWINPKITFEAAIQKQLKDFAKHNPEIKPKNNPENKNDRPSY
SIO_010081: LM596_RS12720
subclass of: SO_0000673
so part of: LM596_RS12720
location: 43673..44224
location: region:43673-44224:1
so has part: feature:43673-44224:1:exon

WP_003691010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43673-44224:1:exon

LM596_RS12725
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12725
old locus tag: LM596_12725
so part of: sequence
location: complement(44214..44492)
location: region:44214-44492:-1
so has part: feature:44214-44492:-1:exon
subclass of: SO_0000010

position:44214:-1
position: 44214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44492:-1
position: 44492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44214-44492:-1:exon

LM596_RS12725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12725
old locus tag: LM596_12725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNQYEKLVEQQARLKQKIEREDFKLRQSKYYESRQARKVRSRRLIQKGALLEKYFQADNLSVEQTEELLKTFADYVNAHKPDKLKNDQPNN
SIO_010081: LM596_RS12725
subclass of: SO_0000673
so part of: LM596_RS12725
location: complement(44214..44492)
location: region:44214-44492:-1
so has part: feature:44214-44492:-1:exon

WP_003691012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44214-44492:-1:exon

LM596_RS12730
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12730
old locus tag: LM596_12730
so part of: sequence
location: complement(44515..44742)
location: region:44515-44742:-1
so has part: feature:44515-44742:-1:exon
subclass of: SO_0000010

position:44515:-1
position: 44515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44742:-1
position: 44742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44515-44742:-1:exon

LM596_RS12730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12730
old locus tag: LM596_12730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGGIVMSQSNLEKQEAKLKALNQKIKDEKNKIEQRLGKQIISQANLDYANLSNDKIKLLAKQFSEFLKVKSVDH
SIO_010081: LM596_RS12730
subclass of: SO_0000673
so part of: LM596_RS12730
location: complement(44515..44742)
location: region:44515-44742:-1
so has part: feature:44515-44742:-1:exon

WP_076621456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44515-44742:-1:exon

LM596_RS12735
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
gene: mobQ
locus tag: LM596_RS12735
old locus tag: LM596_12735
so part of: sequence
location: 44996..47059
location: region:44996-47059:1
so has part: feature:44996-47059:1:exon
subclass of: SO_0000010

position:44996:1
position: 44996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47059:1
position: 47059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44996-47059:1:exon

LM596_RS12735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
gene: mobQ
locus tag: LM596_RS12735
old locus tag: LM596_12735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003660197.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIFHMSFSNISAGKGRSAIAGASYRSGEKLFDQKEGRSYFYARSVMPESFILTPKNAPEWASDREKLWNEVERKDRRANSRYAKEFNVALPVELSEDEQKELLTKYVQENFVDEGMVADVAIHRDHPDNPHAHVMLTNRPFNPDGTWGLKSKRENILDENGNKTYTGNSRFPRSRKVWLVDWDKKEKINQWRHNWAASVNQALEQKNIPDRISEKSFVEQGIADTPMQHEGINSKRHERKAFNQQVKNYRKAKASYKNNQEKVINRGHLDSLSKHFSFNEKRVVKELSHELKTYISLENLDDKRRMLFNWKNSTLIKHAVGEDVTKQLLTINQQESSLKKADELLNKVVDRTTKKLYPELNFEQTTQAERRELIKETDSEQTVFKGSELNERLMNIRDDLLTQQLLTFTKRPYVGFKLLMQQEKEVKIELKYTLMIHSDSLESLEHVDKGLLEKYSPAEQQKITRAVKDLRTIIAVKQVIQTQYHEVLKRAFPNGDLDDLSLVRQEQAYTAVMYYDPTLKPLKVETMAQWQENPPRVFSTQEHQLGLAYLSGQLSLDQLENHHLQRVLKHDGTKQIFLGECKDDPTIKTSQIEKIRKQLKEQQAKDDQCRKANIGHYQPLNYKPVSPDYYLKTAFSNAIMTALYARDEDYQRQKQAQGLKETEWEMTKKQRQHQTRNRHEDGGMHL
SIO_010081: LM596_RS12735
subclass of: SO_0000673
so part of: LM596_RS12735
location: 44996..47059
location: region:44996-47059:1
so has part: feature:44996-47059:1:exon

WP_003688720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44996-47059:1:exon

LM596_RS13140
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS13140
old locus tag: LM596_12740
so part of: sequence
location: 47144..47491
location: region:47144-47491:1
so has part: feature:47144-47491:1:exon
subclass of: SO_0000010

position:47144:1
position: 47144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47491:1
position: 47491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47144-47491:1:exon

LM596_RS13140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS13140
old locus tag: LM596_12740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015007070.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARQHEWISLSQAAIKLGHDRSYVSLWLRRHPNSMPEEYLMETGTVKLISLEGIEWIKKQSKKEGVLVSNSSANEDQHLEVTILGVTLLTIHFTGRARGKLVVEPNHRKLVRDRG
SIO_010081: LM596_RS13140
subclass of: SO_0000673
so part of: LM596_RS13140
location: 47144..47491
location: region:47144-47491:1
so has part: feature:47144-47491:1:exon

WP_076621455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47144-47491:1:exon

LM596_RS12745
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12745
old locus tag: LM596_12745
pseudo: true
so part of: sequence
location: complement(<47448..47810)
location: region:47448-47810:-1
so has part: feature:47448-47810:-1:exon
subclass of: SO_0000010

position:47448:-1
position: 47448
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:47810:-1
position: 47810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47448-47810:-1:exon

LM596_RS12745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12745
old locus tag: LM596_12745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003597916.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CorA family divalent cation transporter
SIO_010081: LM596_RS12745
subclass of: SO_0000673
so part of: LM596_RS12745
location: complement(<47448..47810)
location: region:47448-47810:-1
so has part: feature:47448-47810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47448-47810:-1:exon

LM596_RS12750
type: Gene
subclass of: SO_0000704
RO_0002162: 1618
locus tag: LM596_RS12750
old locus tag: LM596_12750
so part of: sequence
location: 48014..48370
location: region:48014-48370:1
so has part: feature:48014-48370:1:exon
subclass of: SO_0000010

position:48014:1
position: 48014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48370:1
position: 48370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48014-48370:1:exon

LM596_RS12750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1618
locus tag: LM596_RS12750
old locus tag: LM596_12750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003604572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF488 family protein
translation: MILKVTLERIYQKPQASGFRVLVDRVWPRGISKVNAALDLWAKTIAPSTELRKWFGHDPEKYPEFKKRYLAELAANSDLPDFIKTLKQHEQEPVIMLYGAKDETHNQAVALSELLKTK
SIO_010081: LM596_RS12750
subclass of: SO_0000673
so part of: LM596_RS12750
location: 48014..48370
location: region:48014-48370:1
so has part: feature:48014-48370:1:exon

WP_029327459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48014-48370:1:exon