Sphingomonas hengshuiensis strain WHSC-8 isolate soil of Hengshui Lake plasmid unnamed, complete sequence.
type: Entry
definition: Sphingomonas hengshuiensis strain WHSC-8 isolate soil of Hengshui Lake plasmid unnamed, complete sequence.
sequence version: NZ_CP010837.1
sequence date: 2022-11-10
sequence: sequence
division: CON
label: NZ_CP010837.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN03329624
keyword: RefSeq
source: Sphingomonas hengshuiensis
organism: Sphingomonas hengshuiensis
taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.
reference: 1
references: 26410379
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP010837.1.\nBacteria available from Shuzhen Wei, weishuzhen66@163.com.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Pacific Biosciences SMRT Analysis Software\n v. 2.0\nGenome Coverage :: 45x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/10/2022 05:58:36\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 4,901\nCDSs (total) :: 4,844\nGenes (coding) :: 4,768\nCDSs (with protein) :: 4,768\nGenes (RNA) :: 57\nrRNAs :: 2, 1, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 2 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 3\nPseudo Genes (total) :: 76\nCDSs (without protein) :: 76\nPseudo Genes (ambiguous residues) :: 0 of 76\nPseudo Genes (frameshifted) :: 28 of 76\nPseudo Genes (incomplete) :: 58 of 76\nPseudo Genes (internal stop) :: 11 of 76\nPseudo Genes (multiple problems) :: 17 of 76\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 36853
topology: circular
so has quality: SO_0000988
location: 1..36853
location: region:1-36853:1
RO_0002162: 1609977

NZ_CP010837
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN03329624
type: BioSample
SIO_000068: biosample

1
title: Sphingomonas hengshuiensis sp. nov., isolated from lake wetland
author: Wei, S.
author: Wang, T.
author: Liu, H.
author: Zhang, C.
author: Guo, J.
author: Wang, Q.
author: Liang, K.
author: Zhang, Z.
journal: Int J Syst Evol Microbiol
volume: 65
issue: 12
pages: 4644-4649
year: 2015
pubmed: 26410379

26410379
type: PubMed
SIO_000068: pubmed

2
title: The complete genome of Sphingomonas hengshuiensis sp. WHSC-8 isolated from soil of Hengshui Lake
author: Wei, S.
author: Guo, J.
author: Su, C.
author: Wu, R.
author: Zhang, Z.
author: Liang, K.
author: Li, H.
author: Wang, T.
author: Liu, H.
author: Zhang, C.
author: Li, Z.
author: Wang, Q.
author: Meng, J.
journal: Unpublished

3
title: Direct Submission
author: Wei, S.
author: Guo, J.
author: Su, C.
author: Wu, R.
author: Zhang, Z.
author: Liang, K.
author: Li, H.
author: Wang, T.
author: Liu, H.
author: Zhang, C.
author: Li, Z.
author: Wang, Q.
author: Meng, J.
journal: Submitted (05-FEB-2015) College of Life Science, Hengshui University, Heping West Road 1088, Taocheng District, Hengshui, Hebei 053000, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36853:1
position: 36853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-36853:1:source
so part of: sequence
organism: Sphingomonas hengshuiensis
mol type: genomic DNA
strain: WHSC-8
isolate: soil of Hengshui Lake
isolation source: soil of Hengshui Lake
type material: type strain of Sphingomonas hengshuiensis
plasmid: unnamed
country: China: Hebei
collection date: 2010-07

1609977
type: Taxonomy
SIO_000068: taxonomy

TS85_RS23680
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23680
old locus tag: TS85_23675
so part of: sequence
location: 282..1685
location: region:282-1685:1
so has part: feature:282-1685:1:exon
subclass of: SO_0000010

position:282:1
position: 282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685:1
position: 1685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282-1685:1:exon

TS85_RS23680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23680
old locus tag: TS85_23675
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDFMTPAQAQAVRARTGTVEVTDALNKAFEAGQASGRTVYLPDGLYIVGNLLFGSQNQKGQSAAPLGLQGQSKMGAVLRARPGLRGTLLQSWSLAGVTFSDFSIETTGTDAQAWDCQWKPGPGPSTQNVIRHIMVTGGTAPLHVNWDNLNDTYPTAVTVRVDDPAAASCGISMVQSGGLSLMRECIWANCYLRFGTQNGKIDGCWGHGIEFAANSLNHVEISAGYLYANPTHRAVLWSQSYQAFQSVRALICIATQFVTETPGAAAYFELNAYSEMRFLGCQWIGLTKPLLGKRSLSDSYANVLVKIEGGTHSGNLELNENPRFEIECEGFMNFATGRMVTKNRGGTFVPIIRGAGAAAAPYTSGSKTFGRYHRSGNLVRFKMRLEWSAHAGAGSRSRLQIAGLPLAYDPESIDSVSLEYSGTTFAGKHVLPQIANGVIDFLATDGSTVTLPKSGDLILSGSYTVLA
SIO_010081: TS85_RS23680
subclass of: SO_0000673
so part of: TS85_RS23680
location: 282..1685
location: region:282-1685:1
so has part: feature:282-1685:1:exon

WP_044337064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282-1685:1:exon

TS85_RS23685
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23685
old locus tag: TS85_23680
so part of: sequence
location: complement(1689..2687)
location: region:1689-2687:-1
so has part: feature:1689-2687:-1:exon
subclass of: SO_0000010

position:1689:-1
position: 1689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2687:-1
position: 2687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1689-2687:-1:exon

TS85_RS23685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23685
old locus tag: TS85_23680
inference: COORDINATES: protein motif:HMM:NF025025.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family A protein
translation: MSVVIRDCRYASDNYQDRDYAVTIAIPTFNRPEFLRESLESAAKQTGFEDFEILVVDNCSEPENVESVLGYLSYYDGPPLRYYVNETNIGMFGNWNRCLALARGEWTTILSDDDLLFPEFLTKMQAYIDHKPVGSIICQARIMDNREVKPKGVSGFKTELKLRVNRLLRFGFSQRIRLTPRRLFWGNIAGSSLGALFRTREALAMGGFDAREFPSADFDLHLKFARGSGLDQVADQLCAVRLQENESMKVATMQGFFTRDYRRRVAAVEGGTVPRSWARWIPYLLAYEIGVGRRNWGVHVDIAAIEAELGIRVPRRVPAIPMWLVRVAHRGV
SIO_010081: TS85_RS23685
subclass of: SO_0000673
so part of: TS85_RS23685
location: complement(1689..2687)
location: region:1689-2687:-1
so has part: feature:1689-2687:-1:exon

WP_044337066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1689-2687:-1:exon

TS85_RS23690
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23690
old locus tag: TS85_23685
so part of: sequence
location: complement(2684..4030)
location: region:2684-4030:-1
so has part: feature:2684-4030:-1:exon
subclass of: SO_0000010

position:2684:-1
position: 2684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4030:-1
position: 4030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2684-4030:-1:exon

TS85_RS23690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23690
old locus tag: TS85_23685
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRLLRPVMARRGFAIAALAQSLQYGSGLLLLPVVVRELSAPEVGLWYIFIAAQGLSAVVDFGFQPTIARYVSLAWSGASSFKSSDNTSKEISGPNLKLLANLLVASRKLYGILAFLLLAILGIVGAFYLIPLARSSGLDLTAVMTSWFLFSAATALGVYFLWIPALLLGSGRGAQNYTFLVLSRGSSALLGIAALLLGGGLIGLSAAFLGAQIIARVGGGIFLARLPLARATEIEAGRPQALLREIGPNAARLGLVGVGAFMITRLNVFVVSSFYGLTAAGSFSISLQMLMAVATIAQLPAQMSLSQIVAARVARNRDALSRIATRAVLSFLAIAVFGSIAVVWLAPHLLHALRSSVGPLPFPSMLLLAVVLVLEGNHSLHAFLITTANKVPFVVPALVSGVAVAVLVTLSCWLGLGIIGVIAAQGLAQAAYNNWKWPLMFWKELER
SIO_010081: TS85_RS23690
subclass of: SO_0000673
so part of: TS85_RS23690
location: complement(2684..4030)
location: region:2684-4030:-1
so has part: feature:2684-4030:-1:exon

WP_155006624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2684-4030:-1:exon

TS85_RS23695
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23695
old locus tag: TS85_23690
so part of: sequence
location: complement(4071..4967)
location: region:4071-4967:-1
so has part: feature:4071-4967:-1:exon
subclass of: SO_0000010

position:4071:-1
position: 4071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4967:-1
position: 4967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4071-4967:-1:exon

TS85_RS23695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23695
old locus tag: TS85_23690
inference: COORDINATES: protein motif:HMM:NF027681.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MTRRALVTGITGFIGGALSKRLLAEGWRVDAIVRPQSNTDCLPFARDVNFHIVEDGQDLTPVFAESRPDSVFHLASLYLAEHRPDQIGALVQSNILFPTLLAEAMAATGSRCLINTGTAWQNFQGKDYHPVNLYSATKQATEDLLLYYASARDLSVVTLRLFDTYGRGDKRRKLLQILIDSAKSGDPIDMSPGEQIVDMTHIDDVVDAFLLAAEHQLAQQRTLSETYYVSNERQSVRALASLVSETLGRPIEANFGGRPYRAREVMHPFSPQSEDLVPGWCAKRRLSDQILRLSQGAD
SIO_010081: TS85_RS23695
subclass of: SO_0000673
so part of: TS85_RS23695
location: complement(4071..4967)
location: region:4071-4967:-1
so has part: feature:4071-4967:-1:exon

WP_044337070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4071-4967:-1:exon

TS85_RS23700
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
gene: rfbC
locus tag: TS85_RS23700
old locus tag: TS85_23695
so part of: sequence
location: complement(4964..5527)
location: region:4964-5527:-1
so has part: feature:4964-5527:-1:exon
subclass of: SO_0000010

position:4964:-1
position: 4964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5527:-1
position: 5527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4964-5527:-1:exon

TS85_RS23700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
gene: rfbC
locus tag: TS85_RS23700
old locus tag: TS85_23695
EC number: 5.1.3.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019626260.1
GO function: GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose 3,5-epimerase
translation: MDTEPTDIPGCYVLQAKVLGDPRGTFTKTFHMPRFEELGLRTDWREEYFSTSAKGVVRGMHFQSPPADHAKMVFCLTGEVLDVVVDLRRGSPAFGKALGFTLSAENGRGLYLPTGCAHGFVSMRDASGMYYKVTSVHAPDHDLGIAWDSIDFDWPVRAPALSARDAAHPRLSDFTTPFAFDPEGAAL
SIO_010081: TS85_RS23700
subclass of: SO_0000673
so part of: TS85_RS23700
location: complement(4964..5527)
location: region:4964-5527:-1
so has part: feature:4964-5527:-1:exon

WP_173426293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4964-5527:-1:exon

TS85_RS23705
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
gene: rfbH
locus tag: TS85_RS23705
old locus tag: TS85_23700
so part of: sequence
location: complement(5535..6848)
location: region:5535-6848:-1
so has part: feature:5535-6848:-1:exon
subclass of: SO_0000010

position:5535:-1
position: 5535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6848:-1
position: 6848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5535-6848:-1:exon

TS85_RS23705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
gene: rfbH
locus tag: TS85_RS23705
old locus tag: TS85_23700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019082567.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipopolysaccharide biosynthesis protein RfbH
translation: MTADDLRREIRKLVGQYAEAQFAPKPFVPGESVIPPAGKVIGAPEIELMVEASLDGWLTTGRFNTEFEAGLAKLLGAPYVLTTTSGSSANLLALSCLTSHKLGDRRLKPGDEVITVAAGFPTTVNPSIQHGLVPVFVDVDVPTYNIDASLIEAAITEKTGAIMIAHTLGNPFNLAEVRRICDEHDLWLVEDCCDALGATYDGKNVGLWGDVATVSFYPAHHITMGEGGAVFTQSLELRPIIESIRDWGRDCYCAPGCDNTCGVRFGQQHGTLPFGYDHKYVYSHLGYNLKITDMQAACGLAQLDRAEGFVAARRRNFGLLTERLKSLEEIFILPEATPNSDPSWFGFPLMLREGVDAKRVDVTRFLDQNKIGTRLLFAGNLTRQPYFEHVNYRVVGDLTRTDRVMNDTFWLGLYPALGQEHFDYVGGKLEEFFGLNF
SIO_010081: TS85_RS23705
subclass of: SO_0000673
so part of: TS85_RS23705
location: complement(5535..6848)
location: region:5535-6848:-1
so has part: feature:5535-6848:-1:exon

WP_044337074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5535-6848:-1:exon

TS85_RS23710
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
gene: rfbG
locus tag: TS85_RS23710
old locus tag: TS85_23705
so part of: sequence
location: complement(6860..7948)
location: region:6860-7948:-1
so has part: feature:6860-7948:-1:exon
subclass of: SO_0000010

position:6860:-1
position: 6860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7948:-1
position: 7948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6860-7948:-1:exon

TS85_RS23710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
gene: rfbG
locus tag: TS85_RS23710
old locus tag: TS85_23705
EC number: 4.2.1.45
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011063342.1
GO function: GO:0047733 - CDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-glucose 4,6-dehydratase
translation: MVRGVVDPAFWAGKRVFLTGHTGFKGSWMALWLQKMGARVTGFALAPPTDPALFDVARVAEGMTSILGDIRDRDVLEAALVAADPEIVIHMAAQPLVRASYDDPVGTYATNVMGTVHLLEAVRKAPSVRAVCVVTTDKCYENREWVWGYREDEAMGGYDPYSNSKGCAELVTSAYRRSFFGAGSPVAIASGRAGNVIGGGDWAADRLIPDILRAIGAGEPVQIRNPVAIRPWQHVLEPVGGYLVLCQALWENPQAAAEAWNFGPRDDDAQPVQWIVEKLCAQWGEGADWVHDASTQPHEARYLKLDISKARAGLGWQPRWSLGEALERIVAWHRAWLSGADMHAYCLSELERFAAASPSVPA
SIO_010081: TS85_RS23710
subclass of: SO_0000673
so part of: TS85_RS23710
location: complement(6860..7948)
location: region:6860-7948:-1
so has part: feature:6860-7948:-1:exon

WP_155006625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6860-7948:-1:exon

TS85_RS23715
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
gene: rfbF
locus tag: TS85_RS23715
old locus tag: TS85_23710
so part of: sequence
location: complement(7942..8712)
location: region:7942-8712:-1
so has part: feature:7942-8712:-1:exon
subclass of: SO_0000010

position:7942:-1
position: 7942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8712:-1
position: 8712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7942-8712:-1:exon

TS85_RS23715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
gene: rfbF
locus tag: TS85_RS23715
old locus tag: TS85_23710
EC number: 2.7.7.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011261038.1
GO function: GO:0047343 - glucose-1-phosphate cytidylyltransferase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphate cytidylyltransferase
translation: MKAVILAGGLGTRFAEETSLRPKPMIEIGGRPILWHILKIYAAHGVTDFVICCGYKGYVIKEYFANYFLHMSDVTFDMRENEMIVHEKRAEPWRVTLVDTGDDSMTGGRLKRVAEHVKDEEFFFFTYGDGVGDIDITKSIAFHRAHGKLATMTATYPPGRFGALEIEDGQVTHFLEKPKGDGGMINGGYFVLSPKVIDYIADDGVTWEQEPLRNLAADGELMAYEHHGFWQPMDTLRDKQHLEALWDARKAPWHIW
SIO_010081: TS85_RS23715
subclass of: SO_0000673
so part of: TS85_RS23715
location: complement(7942..8712)
location: region:7942-8712:-1
so has part: feature:7942-8712:-1:exon

WP_044337076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7942-8712:-1:exon

TS85_RS23720
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23720
old locus tag: TS85_23715
so part of: sequence
location: complement(8722..9711)
location: region:8722-9711:-1
so has part: feature:8722-9711:-1:exon
subclass of: SO_0000010

position:8722:-1
position: 8722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9711:-1
position: 9711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8722-9711:-1:exon

TS85_RS23720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23720
old locus tag: TS85_23715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016975342.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MPVVALQSGKRFEVAPDRSILDAARDQGIILEYSCRTGRCGICKAPVLSGETTVLRSEAESLTAAEAAAGMILTCCRAAASDVALDIEPLDRLAGIEIKTMPARIVSIEQLAPEIVRVVLRTPPASPLRFVAGQYVDILADGVRRSYSLANAPRADGLLEFLIKRYPGGHLSAYWFERAKPNDLVRIEGPFGTFFLRDEAPANLLFLATGTGIAPVKALLEEIAADPAQAARHRLRVFWGNREAENFCWDPVTLGLDVGFHHLLSGNDAGWSGKRGYVHDAASDDGFDPAETMVYACGSNAMIASAREKFLALGLPSRRFLSDAFVSSN
SIO_010081: TS85_RS23720
subclass of: SO_0000673
so part of: TS85_RS23720
location: complement(8722..9711)
location: region:8722-9711:-1
so has part: feature:8722-9711:-1:exon

WP_044337078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8722-9711:-1:exon

TS85_RS23725
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23725
old locus tag: TS85_23720
so part of: sequence
location: complement(9994..11199)
location: region:9994-11199:-1
so has part: feature:9994-11199:-1:exon
subclass of: SO_0000010

position:9994:-1
position: 9994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11199:-1
position: 11199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9994-11199:-1:exon

TS85_RS23725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23725
old locus tag: TS85_23720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRAFVFIKTAAILIGGAVVLWVATGVTLDLTLARTRPALVLDWWPVGVQAKVAEGQAVVAEANRVAPEKVDRVRAQLRAAALREPVNSNALGALAALADYRRDRAGARALFRVSETLSRRNTFAQLWLIEDAVARDDSVEALKHYDRAMRVSPEARVMLLPILLTASSDPAIRKELLPLLAQRPLWWKDYVQRLAQEGDNPQVMADVLRAIRLDIRQVDQRSLAEDVLRRMVSLNDERRAMLAANHMEGLAGSTRSLRGGDFEPNNSLLPFTWWMRDETSIRAYRDIVPNGSLGLRVVTSAGNSGGVAQQLFGLSPGHYVFQGQAGDVSADPLARPALELACARGAQLARFVLPASDENGRSFRFAFDVPATDCAMQSISLVTAPAVDTDMWLDSLAITR
SIO_010081: TS85_RS23725
subclass of: SO_0000673
so part of: TS85_RS23725
location: complement(9994..11199)
location: region:9994-11199:-1
so has part: feature:9994-11199:-1:exon

WP_044337080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9994-11199:-1:exon

TS85_RS23730
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23730
old locus tag: TS85_23725
so part of: sequence
location: complement(11213..13453)
location: region:11213-13453:-1
so has part: feature:11213-13453:-1:exon
subclass of: SO_0000010

position:11213:-1
position: 11213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13453:-1
position: 13453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11213-13453:-1:exon

TS85_RS23730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23730
old locus tag: TS85_23725
inference: COORDINATES: protein motif:HMM:TIGR01007.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide biosynthesis tyrosine autokinase
translation: MQYERTGNAMRSADDTLIDVGGSPQEARLNLSLAWVIATLKKRKWLIVGSVVGALLLGIVITLLMTPQFTSKTVVEIQRETRNFTNVDGVDSRTSSTVDPEFYETQAGLLRSISLAGSVATDDRLQDNAGFFRMLKSRKAQAWFSNDRLIPNASTREERVREASELLLDNIKVTIVRQSRLATISFTSPDVNFSKKIVDSWAAHFVQATLDRRYAATSYARKFLEERLGQLRTRIDQAERQLVDYAAKQDIVNLPGETGTAANSGTTTERSLVAEDLVALNKELASATAQRIEAQSRLGARGGDVQEALSNTGISQMRARRAELSVQYAEMLEKFDAAYPPAQALKAQIVTMDKSIAQEESRVRSTLQQTYQAAQQREAVLSGKVDSLKTGLFDLRRRSTQYNILMREVDTNRQLYDALLQRYKEIGVAGGVGVNNIAVVDVGDMPDKPSSPKLMLNLAFALIAGILAGVSLAFALEQLEDSLSDPAEVPELLRIPLIGVVPKMEGELVPALLDVKSPLSEAYFSVQTSLALATQHGFPRTLVITSSRANEGKSLTSLGLAKTLASQGRKVLLIDGDMRSPSVHYMLDLRGGPGLSNILSGSEAPLAAVQESGIANLSIVAAGPHPPSTAELLSGPGLRPALATLLERFDHILIDAPPVMGFADAPLLANQVEGVCFVVEAHGTNKASARTAIARLRSADTTIFGAIVTKFDSKRSFSGYGYDYGYGYGYGEGEGEGEGSAARRKW
SIO_010081: TS85_RS23730
subclass of: SO_0000673
so part of: TS85_RS23730
location: complement(11213..13453)
location: region:11213-13453:-1
so has part: feature:11213-13453:-1:exon

WP_162184764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11213-13453:-1:exon

TS85_RS23735
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23735
old locus tag: TS85_23730
so part of: sequence
location: complement(13476..14066)
location: region:13476-14066:-1
so has part: feature:13476-14066:-1:exon
subclass of: SO_0000010

position:13476:-1
position: 13476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14066:-1
position: 14066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13476-14066:-1:exon

TS85_RS23735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23735
old locus tag: TS85_23730
inference: COORDINATES: protein motif:HMM:NF014606.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide export protein
translation: MRADLTIPARPYVIGPSDQLTVEVFGIDELSKNVTVDLTGQIALPMVGALKVSGMTADELTAELVTRFRQAHVRNPQVTVNIVTAASQVITVDGSVATPGIYPLVGRMSLMRAIARASGTTEFARENYVVVFRNVEGKRYAALYDLRAIRQGIYEDPEIFSNDLIYVGDDQARRVFRDLVTAAPLITTPLIYLITQ
SIO_010081: TS85_RS23735
subclass of: SO_0000673
so part of: TS85_RS23735
location: complement(13476..14066)
location: region:13476-14066:-1
so has part: feature:13476-14066:-1:exon

WP_052508152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13476-14066:-1:exon

TS85_RS23740
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23740
old locus tag: TS85_23735
so part of: sequence
location: complement(14396..15379)
location: region:14396-15379:-1
so has part: feature:14396-15379:-1:exon
subclass of: SO_0000010

position:14396:-1
position: 14396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15379:-1
position: 15379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14396-15379:-1:exon

TS85_RS23740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23740
old locus tag: TS85_23735
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012115535.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MRAIGHACHIEVTDLLYRPDDQTRLSIVIPTLNAGRYLSTLLPALERQNIAPERYLVIDSQSQDETRNAFRDFGATVVEIDRRTFNHGGTRQRAVEMRPEAEIIVMMTQDAIPQGGDAILRLVDAFADPGTGMAYGRQLPRTVARGIERHARLINYPAHSEVRELKDRDRSGVKTVFCSDSFAAYRRSALDQAGGFPEDAFFAEDQLVAARMLIDGWRIAYRGDAEVVHSHGYTMMEEFRRYFDVGVFHGRNRWLIETFGAAEGEGLRFVKSELAYLARHDPTQLPSAIIRTFAKYAGYKMGSREALLSNRWKRRLSMQPFYWQDPK
SIO_010081: TS85_RS23740
subclass of: SO_0000673
so part of: TS85_RS23740
location: complement(14396..15379)
location: region:14396-15379:-1
so has part: feature:14396-15379:-1:exon

WP_077228907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14396-15379:-1:exon

TS85_RS23745
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23745
old locus tag: TS85_23740
so part of: sequence
location: 15746..17161
location: region:15746-17161:1
so has part: feature:15746-17161:1:exon
subclass of: SO_0000010

position:15746:1
position: 15746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17161:1
position: 17161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15746-17161:1:exon

TS85_RS23745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23745
old locus tag: TS85_23740
inference: COORDINATES: protein motif:HMM:TIGR03025.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
translation: MLGKNGIGSVQIGTQHSWVDEDCNIERVTSKRGVRMRLLTTLAFIDIAMICAGLTFVAWMYLGQANNPRLVTFLCLVLPIYYLTAIRQQAYRPASVIRASRSTRRACLSFLTAVLIVISITFIIKSSDNLSRGISIGGTLASCLLLSLGRYLFAHHAFSALNGSPESEVVLVDNFAPPQGCTAFKIDVEALNIRPDINDPVMLDRIGSLIHEADRVIVACHPERRSEWSLALKGAGVNVEVLMPELDAIGAISTTRYYDVATTLIATGPLNAVDSIIKRLFDLAVAIPAIIILSPLMIVVALLIRLDSPGNVLFTQMRIGKGNRMFRMFKFRSMRTDLLDHNASKLTTRNDARVTRIGKFIRKTSIDELPQLLNVLRGDMSIVGPRPHATGALAGDALYWEVTSHYWSRHAVKPGLTGLAQVRGFRGNTETGDDLVNRLQADLAYLESWTIWRDVMLVFQTFRVLTHRNAF
SIO_010081: TS85_RS23745
subclass of: SO_0000673
so part of: TS85_RS23745
location: 15746..17161
location: region:15746-17161:1
so has part: feature:15746-17161:1:exon

WP_077228908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15746-17161:1:exon

TS85_RS23750
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23750
old locus tag: TS85_23745
so part of: sequence
location: 17336..18685
location: region:17336-18685:1
so has part: feature:17336-18685:1:exon
subclass of: SO_0000010

position:17336:1
position: 17336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18685:1
position: 18685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17336-18685:1:exon

TS85_RS23750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23750
old locus tag: TS85_23745
inference: COORDINATES: protein motif:HMM:NF016800.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-antigen ligase family protein
translation: MPPIPIIAFAIFGLAVAFTGGSSRPDNIWLLGLRPIAVLCIVAMLLTARPDWRSIRPLPLLLALFATTIAIQLVPLPSAIWQSLPGRETYTRVAQALGGAGQWHPLALSPDRTWNSLIALMVPFGIMLGFLLLNERQRRLLLLPVLGTIAFSMLLGVAQIASGGSSMLYWYKISGHDQLIGLLANRNHQGAMLAMALPLIRAWTLFPTRSPQESRHRLLMGLAAAAVILLYILVLGSRAGLVLAVVGLVAALLVAPTLGATRLSVRARWLAAGGFAVGIAAIVVLVLSMDRAVAIGRLVDDDLSTEGRLAALPTLLRIVGDTFPFGTGFGSFVPVYASYEPDALLKTTYFNNAHNDLIELVITGGLPALAVFLAFFVWWLWTSWRRFTSPARSQSWRALHRAASFAILVLLLASIADYPLRTPLLGAVFTLLCCWLAYTPANGTSDSHD
SIO_010081: TS85_RS23750
subclass of: SO_0000673
so part of: TS85_RS23750
location: 17336..18685
location: region:17336-18685:1
so has part: feature:17336-18685:1:exon

WP_044337089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17336-18685:1:exon

TS85_RS23755
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
gene: rfbC
locus tag: TS85_RS23755
old locus tag: TS85_23750
so part of: sequence
location: 18678..19250
location: region:18678-19250:1
so has part: feature:18678-19250:1:exon
subclass of: SO_0000010

position:18678:1
position: 18678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19250:1
position: 19250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18678-19250:1:exon

TS85_RS23755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
gene: rfbC
locus tag: TS85_RS23755
old locus tag: TS85_23750
EC number: 5.1.3.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017505768.1
GO function: GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose 3,5-epimerase
translation: MTENPVQLLRPKRFGDARGWFTEVYSVPVFEALGIGCTFVQDNHSLSVPAFTLRGLHFQVPPRGQDKLVRCVRGAIFDVAVDVRRGSPTYGKWVGAELNAENGHQLFIPIGFAHGFVTLEPDCEVSYKCSDTYAPQQDGGIRWDDPAIGIEWPLPAGAVPELSPKDAVQPLLADFDSPFPYDGRPLAPLA
SIO_010081: TS85_RS23755
subclass of: SO_0000673
so part of: TS85_RS23755
location: 18678..19250
location: region:18678-19250:1
so has part: feature:18678-19250:1:exon

WP_044337091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18678-19250:1:exon

TS85_RS23760
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
gene: rfbB
locus tag: TS85_RS23760
old locus tag: TS85_23755
so part of: sequence
location: 19262..20314
location: region:19262-20314:1
so has part: feature:19262-20314:1:exon
subclass of: SO_0000010

position:19262:1
position: 19262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20314:1
position: 20314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19262-20314:1:exon

TS85_RS23760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
gene: rfbB
locus tag: TS85_RS23760
old locus tag: TS85_23755
EC number: 4.2.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018251334.1
GO function: GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-glucose 4,6-dehydratase
translation: MRIFVTGGAGFIGSALVRHLIANTSHEVLNFDKLTYAGTLTTVDGVAQSNRYRFVQADICDAEAVRAAIAEFRPDVITHLAAESHVDRSIDGPGAFIQTNMVGTYTMLAEARAYWLGLEPEAKAAFRFHHISTDEVYGSLGDTGLFTEETPYDPRSPYSASKAGSDHLVSAWGHTYGLPVLITNCSNNYGPYHFPEKLIPLMIAKALDGETLPIYGKGDQVRDWLYVEDHVRALQTVFERGEPGRTYNIGGHNERQNIEVVQTLCAILDELRPRADGQPYAAQMAEVADRPGHDKRYAIDAARIGAELGWHPAETFESGIRKTVEWYLANEGWWRPLVAAKAAERRGVAA
SIO_010081: TS85_RS23760
subclass of: SO_0000673
so part of: TS85_RS23760
location: 19262..20314
location: region:19262-20314:1
so has part: feature:19262-20314:1:exon

WP_044337093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19262-20314:1:exon

TS85_RS23765
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
gene: rfbD
locus tag: TS85_RS23765
old locus tag: TS85_23760
so part of: sequence
location: 20353..21249
location: region:20353-21249:1
so has part: feature:20353-21249:1:exon
subclass of: SO_0000010

position:20353:1
position: 20353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21249:1
position: 21249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20353-21249:1:exon

TS85_RS23765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
gene: rfbD
locus tag: TS85_RS23765
old locus tag: TS85_23760
EC number: 1.1.1.133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019517862.1
GO function: GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose reductase
translation: MSTPRQILVTGANGQLGTELARLAWPDGFEVVALGRDALDLSDPAALAAKVAEHPWAAVINAAAYTAVDKAESDQVAAWTVNALAPAALAAACAAAGVPIVQVSTDYVFAGDRAGAWQVDDPVAPLGVYGASKLGGELAVRTSGARHAIVRTAWVVSAHGNNFVRTMLRVAPNNPVLRVVDDQSGSPTGAADLAQALATIAVRLAEDADAPVGTFHFSNEGAVTWAGFARAIFAQSGLRGGPVADVTPIATADYPTPARRPANSLLSTATLTAAYGIVPRPWDAALADILDELIGTRI
SIO_010081: TS85_RS23765
subclass of: SO_0000673
so part of: TS85_RS23765
location: 20353..21249
location: region:20353-21249:1
so has part: feature:20353-21249:1:exon

WP_044337095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20353-21249:1:exon

TS85_RS23770
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
gene: rfbA
locus tag: TS85_RS23770
old locus tag: TS85_23765
so part of: sequence
location: 21246..22124
location: region:21246-22124:1
so has part: feature:21246-22124:1:exon
subclass of: SO_0000010

position:21246:1
position: 21246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22124:1
position: 22124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21246-22124:1:exon

TS85_RS23770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
gene: rfbA
locus tag: TS85_RS23770
old locus tag: TS85_23765
EC number: 2.7.7.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012454248.1
GO function: GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphate thymidylyltransferase RfbA
translation: MKGIILAGGSGTRLHPATLAVNKQLLPVYDKPMIYYPLSVLMLAGIREILIISSPEYLGNYRNLFGDGAGLGLAISYAEQPRPEGLAQAFTIGADFIGTDNVALVLGDNIFFGAHLTDLLASAVARTHGATVFSYRVEDPERYGVVELGEGGKALSIEEKPSAPKSNHAVTGLYFYDNRVVEMARTLAPSPRGELEITDINRLYMEAGDLFVEQMGRGYAWLDTGTHDSLLEASEFVRTLQHRQGIQIACLEEVAFEMGFIDADQARAAGERFAKTAYGRAILLAVEGRDSC
SIO_010081: TS85_RS23770
subclass of: SO_0000673
so part of: TS85_RS23770
location: 21246..22124
location: region:21246-22124:1
so has part: feature:21246-22124:1:exon

WP_044337096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21246-22124:1:exon

TS85_RS23775
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23775
old locus tag: TS85_23770
so part of: sequence
location: 22186..23010
location: region:22186-23010:1
so has part: feature:22186-23010:1:exon
subclass of: SO_0000010

position:22186:1
position: 22186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23010:1
position: 23010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22186-23010:1:exon

TS85_RS23775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23775
old locus tag: TS85_23770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018616003.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2OG-Fe(II) oxygenase
translation: MTNRRNIADIIVSRLEAEKDRMKAQYAESRDRIGYFYIDDLLPEEMALAIHRQFPKPEAMKLKKSIREYKYIAAQMDQYDPILEESVYAFHDTRVVDLIKDICGIKSAYPDIHLYAGGISMMGKDQYLNPHIDNSHDKDRSRWRVLNLLYYVSPEWHEDNGGNLELWPSGVEQDQITVHSRFNRLAVMATHNDSWHSVSPITADDFRCCVSNYYFADEALKADDSFHVTSFRGRPEQKARDIVLRADAAARMAVRKIFAKGVVENKHVYKRDVD
SIO_010081: TS85_RS23775
subclass of: SO_0000673
so part of: TS85_RS23775
location: 22186..23010
location: region:22186-23010:1
so has part: feature:22186-23010:1:exon

WP_044337097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22186-23010:1:exon

TS85_RS23780
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23780
old locus tag: TS85_23775
so part of: sequence
location: complement(23090..23449)
location: region:23090-23449:-1
so has part: feature:23090-23449:-1:exon
subclass of: SO_0000010

position:23090:-1
position: 23090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23449:-1
position: 23449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23090-23449:-1:exon

TS85_RS23780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23780
old locus tag: TS85_23775
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLIASLLGGAALVAAAPMPLVKPTAYVYCTASSTSPRGQGLIVTSIFRSRSEPAFIRTAFANYLRTSYAPYGNGWVFSPLDVSCQAFEEKRMAETRRNLDISRVPQPQQTVFTVSFQLG
SIO_010081: TS85_RS23780
subclass of: SO_0000673
so part of: TS85_RS23780
location: complement(23090..23449)
location: region:23090-23449:-1
so has part: feature:23090-23449:-1:exon

WP_044337099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23090-23449:-1:exon

TS85_RS25715
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS25715
so part of: sequence
location: complement(23453..23803)
location: region:23453-23803:-1
so has part: feature:23453-23803:-1:exon
subclass of: SO_0000010

position:23453:-1
position: 23453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23803:-1
position: 23803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23453-23803:-1:exon

TS85_RS25715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS25715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFRVLALSIPLAAGACVGNSAVPPGKLPPGANAGVYITADVQAVASCIAAALRTTPEVQGDRIVVAAPGDVGLRYSVGPNGKGKGVYHTQVAIIGVEQDAAQTARVQVCFAPPTTG
SIO_010081: TS85_RS25715
subclass of: SO_0000673
so part of: TS85_RS25715
location: complement(23453..23803)
location: region:23453-23803:-1
so has part: feature:23453-23803:-1:exon

WP_155006627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23453-23803:-1:exon

TS85_RS23785
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23785
old locus tag: TS85_23780
so part of: sequence
location: complement(23884..24183)
location: region:23884-24183:-1
so has part: feature:23884-24183:-1:exon
subclass of: SO_0000010

position:23884:-1
position: 23884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24183:-1
position: 24183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23884-24183:-1:exon

TS85_RS23785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23785
old locus tag: TS85_23780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019517860.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRKPSFANLRSHAPAVIPAPAPAPTIAAPASGAGEGAPQPAPRAQSREGRKQIAGFFSPEMSFAMHMLARRQGRSLQDVMAEAFNDVLRKHGESPIGD
SIO_010081: TS85_RS23785
subclass of: SO_0000673
so part of: TS85_RS23785
location: complement(23884..24183)
location: region:23884-24183:-1
so has part: feature:23884-24183:-1:exon

WP_044337101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23884-24183:-1:exon

TS85_RS23790
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23790
old locus tag: TS85_23785
so part of: sequence
location: complement(24180..24833)
location: region:24180-24833:-1
so has part: feature:24180-24833:-1:exon
subclass of: SO_0000010

position:24180:-1
position: 24180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24833:-1
position: 24833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24180-24833:-1:exon

TS85_RS23790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23790
old locus tag: TS85_23785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012554518.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MPVIAIISQKGGAGKTTLALHLAAAAQEAGRVALVIDTDPQATASQWAAWRHDAPPEVIDSPPPRLAAKVAQALEQGAEVIVIDTPPHADSAARAAVEVADLVLVPCRPSAFDLSAIQTTAKLVQLLKKPAFVVFTAGSPNAPRVYQEAGELVESFGTPPCPLQIPDRAAYRHASAEGRSVMETEPEGKAAEEIRQLYAWTCRQLDMPTPRRKKVTA
SIO_010081: TS85_RS23790
subclass of: SO_0000673
so part of: TS85_RS23790
location: complement(24180..24833)
location: region:24180-24833:-1
so has part: feature:24180-24833:-1:exon

WP_044337103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24180-24833:-1:exon

TS85_RS23795
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23795
old locus tag: TS85_23790
so part of: sequence
location: complement(25085..25960)
location: region:25085-25960:-1
so has part: feature:25085-25960:-1:exon
subclass of: SO_0000010

position:25085:-1
position: 25085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25960:-1
position: 25960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25085-25960:-1:exon

TS85_RS23795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23795
old locus tag: TS85_23790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017183613.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTAFTFGQASARALGGMARGIPVRAPARSGAPHRTGAPVRRDSIEAGTFEEAFFAAPAKGETDQLLRVARRTLDAGRQLRREARAGTRSLTASERLVASLTAAAVRVYEEILTLARLNRGRVYPSYDYLAEATCLGRATIARALHALEEIGFLVRQRRFKRVAGDGPGPRYEQTSNAYRPLLPNSVLAYLPRWMRPAPLPADAEWHAAEQAGAVANMVAGLSCREFARTMVGGDLGKVLARLGARIDAREQAPERESQNHPEPLLDSHKNRTSGVGLVGRRSALTGREYGK
SIO_010081: TS85_RS23795
subclass of: SO_0000673
so part of: TS85_RS23795
location: complement(25085..25960)
location: region:25085-25960:-1
so has part: feature:25085-25960:-1:exon

WP_044337105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25085-25960:-1:exon

TS85_RS23800
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23800
old locus tag: TS85_23795
so part of: sequence
location: complement(26385..27320)
location: region:26385-27320:-1
so has part: feature:26385-27320:-1:exon
subclass of: SO_0000010

position:26385:-1
position: 26385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27320:-1
position: 27320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26385-27320:-1:exon

TS85_RS23800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23800
old locus tag: TS85_23795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019517853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTQPPAPRAKPAKSATAPQRDLFLLDSPLQGEIRGERSLMAFPFFALAKNAWMKPLAYQSDKVSIEVRPSATGVATIYDKEIVLYIASLMASKIEAGEAVGQDFVFTAHDLFSVTGSNHSARSYARLSEALERLQGTQIKTNIEAGGEGEEGFFSWLSEARLHYTRTRSGERRLKAVKVRLCDWLFRAILRDRQVLNYAHAYFQLGPIERRIYEVARSTCEADSLEIDLAMFRLQVGYQNPLPNFRAALNHIAAADAIPDYHLALVEVAEDVAADAAPVRRGRKSHPLRVVISRRAPELAAESESGADPAQ
SIO_010081: TS85_RS23800
subclass of: SO_0000673
so part of: TS85_RS23800
location: complement(26385..27320)
location: region:26385-27320:-1
so has part: feature:26385-27320:-1:exon

WP_044337107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26385-27320:-1:exon

TS85_RS23805
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23805
old locus tag: TS85_23800
so part of: sequence
location: complement(27476..28048)
location: region:27476-28048:-1
so has part: feature:27476-28048:-1:exon
subclass of: SO_0000010

position:27476:-1
position: 27476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28048:-1
position: 28048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27476-28048:-1:exon

TS85_RS23805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23805
old locus tag: TS85_23800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013851020.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MQIGYARVSRGDHQDLGAQLAALDAAGCGRVFREEASGGKADRPELARALVALQPGDVLVVWKLDRLSRSLRDLLFTLEAVAAAGAAFRSLTEAIDTTTPAGRLMLQTLGAFAEFERAMIRERTLNGLAHARAAGRHLGRRPSLTAQQRAEIIARAEAGEGSPSQLASLFRVSRSTVQRVLRAHRARVDL
SIO_010081: TS85_RS23805
subclass of: SO_0000673
so part of: TS85_RS23805
location: complement(27476..28048)
location: region:27476-28048:-1
so has part: feature:27476-28048:-1:exon

WP_044337108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27476-28048:-1:exon

TS85_RS25720
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS25720
so part of: sequence
location: 28227..28511
location: region:28227-28511:1
so has part: feature:28227-28511:1:exon
subclass of: SO_0000010

position:28227:1
position: 28227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28511:1
position: 28511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28227-28511:1:exon

TS85_RS25720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS25720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHPSSNIHLRYPLSRHALLRMQQRSIPQHVVAFLTELTDPVDAGGSCTLHRFDKDSWAEARRLLGGHAPRLDRYRNAYVVLAPNGLVITAARLH
SIO_010081: TS85_RS25720
subclass of: SO_0000673
so part of: TS85_RS25720
location: 28227..28511
location: region:28227-28511:1
so has part: feature:28227-28511:1:exon

WP_155006628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28227-28511:1:exon

TS85_RS24360
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS24360
so part of: sequence
location: 28610..29704
location: region:28610-29704:1
so has part: feature:28610-29704:1:exon
subclass of: SO_0000010

position:28610:1
position: 28610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29704:1
position: 29704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28610-29704:1:exon

TS85_RS24360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS24360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFVLGDPAHGSQRHHKENAVFVSSYLEALELVRKGFAIRMSDGRSAPSLVAPGSLEFIDEPVNRLDDLWAYTMPEPPFSLEAVMVELKQHLRSQAADLGLIASADAASAFIGFPFDPVDDGESSEALERIDLSRFNMTRIVTAAYHSAFRPTAESQSISEDDVDELEQIMVGSLARFSRRHSSPLDREGSALQRTILSAYYRWQIADGCFLACEASDGKDGAIDQSVTEAVAALTGMPATAVRNTLSRDGLSLVRSKLDLPALTDWVVTRRNFAPLREEETYEGRWAWRIANDLHDQPGPKGFAIARSRIGDPSPDLNEAEPAIVKRRATDEMPTAPELRRYAVALHVSPDSLFAAFQTLGSRR
SIO_010081: TS85_RS24360
subclass of: SO_0000673
so part of: TS85_RS24360
location: 28610..29704
location: region:28610-29704:1
so has part: feature:28610-29704:1:exon

WP_052508153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28610-29704:1:exon

TS85_RS23820
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23820
old locus tag: TS85_23815
so part of: sequence
location: 29745..30530
location: region:29745-30530:1
so has part: feature:29745-30530:1:exon
subclass of: SO_0000010

position:29745:1
position: 29745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30530:1
position: 30530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29745-30530:1:exon

TS85_RS23820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23820
old locus tag: TS85_23815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQSLFPRFAATVRDLTDVEVSDPRTADKLALAHADAGGRTVSMVYAPFDHMNPTARIAIVGLTPGLQQARNALSAARAALRRGASVIDAAAEAKVFASFSGPMRANLVAMLDQIGVARHLELASTALLWSERADLVHFTSALRYPVFVDGENWSGQPDALRIPSMRDWLLTYLGEELRSLRGALLVPLGPKVSAMLDYLANQGIVDRSTILDGLPHPSGANAERIAYFLGQKPRDRLSAKTNPTRLDAARASLEAKLKAA
SIO_010081: TS85_RS23820
subclass of: SO_0000673
so part of: TS85_RS23820
location: 29745..30530
location: region:29745-30530:1
so has part: feature:29745-30530:1:exon

WP_044337112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29745-30530:1:exon

TS85_RS23825
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23825
old locus tag: TS85_23820
so part of: sequence
location: complement(30626..30958)
location: region:30626-30958:-1
so has part: feature:30626-30958:-1:exon
subclass of: SO_0000010

position:30626:-1
position: 30626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30958:-1
position: 30958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30626-30958:-1:exon

TS85_RS23825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23825
old locus tag: TS85_23820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010544515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MTARYTVYLTAGAEADLADIHDWIAAHRAPDQAGAFLDTMLARIDSLEQFPDRGSVPPELDALGIRDFRQIVAPPYRLLYRVIVDSVFVLLVADGRRDFQALLERRLLAG
SIO_010081: TS85_RS23825
subclass of: SO_0000673
so part of: TS85_RS23825
location: complement(30626..30958)
location: region:30626-30958:-1
so has part: feature:30626-30958:-1:exon

WP_044337114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30626-30958:-1:exon

TS85_RS23830
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23830
old locus tag: TS85_23825
so part of: sequence
location: complement(30955..31248)
location: region:30955-31248:-1
so has part: feature:30955-31248:-1:exon
subclass of: SO_0000010

position:30955:-1
position: 30955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31248:-1
position: 31248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30955-31248:-1:exon

TS85_RS23830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23830
old locus tag: TS85_23825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012637117.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
translation: MRYSEQVKPVSYLKAHAATLLRGLADRGAPLVITQNGEARAVLQDIASYEATQETMALLKLLALGTRDVEAGRVAPARAAIERLRADRAADGGAPKA
SIO_010081: TS85_RS23830
subclass of: SO_0000673
so part of: TS85_RS23830
location: complement(30955..31248)
location: region:30955-31248:-1
so has part: feature:30955-31248:-1:exon

WP_044337116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30955-31248:-1:exon

TS85_RS23835
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
gene: rfaE1
locus tag: TS85_RS23835
old locus tag: TS85_23830
so part of: sequence
location: 31504..32436
location: region:31504-32436:1
so has part: feature:31504-32436:1:exon
subclass of: SO_0000010

position:31504:1
position: 31504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32436:1
position: 32436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31504-32436:1:exon

TS85_RS23835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
gene: rfaE1
locus tag: TS85_RS23835
old locus tag: TS85_23830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013900679.1
GO function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-glycero-beta-D-manno-heptose-7-phosphate kinase
translation: MTDFRKRIADSSILVVGDVMLDRYWFGEVDRISPEAPVPVVHVQREEYRLGGAANVAANAAALGASVTLMSVVGEDEAGEKLASVIHRSGIKGILKKDDQLSTTVKLRVSGRSQQLLRIDFENRPGNEVLERMTGDFCAVVDQYDAVLLSDYGKGGLGHVSTMIDAARAAGKPVLVDPKGRDYAPYRGATVVTPNRGELALVTGAWSSEAELERLSRTLRDELDLGALLVTRSEEGMSLFDDAGHFRVGADAREVFDVTGAGDTVIATLATLVAAGMPLRDAVPIANRAGGIVVAKFGTSVVGYDDLFGA
SIO_010081: TS85_RS23835
subclass of: SO_0000673
so part of: TS85_RS23835
location: 31504..32436
location: region:31504-32436:1
so has part: feature:31504-32436:1:exon

WP_052508154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31504-32436:1:exon

TS85_RS23840
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23840
old locus tag: TS85_23835
so part of: sequence
location: 32506..33372
location: region:32506-33372:1
so has part: feature:32506-33372:1:exon
subclass of: SO_0000010

position:32506:1
position: 32506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33372:1
position: 33372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32506-33372:1:exon

TS85_RS23840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23840
old locus tag: TS85_23835
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLPRYPVVFLQYRALGDFVIAAQCLGRRRIEPGSGIELLAGEHLRPIAAVLDIHFPLRFFAHPERAIPAIIALRSQGMLRGLKSAILLKGALHKAGIPREALVIFEKLDKRERFLAAGFSATALPHAENIYLAHDAMLDALGLGMHDRVDRAPPAGPVRIYPGSRLPERHVPFKVVAEILDTVSALGLPVELMLLEGERPDLETTGLPFTRVPRTFEALIASIKGARKVISADSMPAHLAEYLDTPIFVCSPTLKSYWLPRSAFTDGWTSLFDEGGGSERLRRFLAA
SIO_010081: TS85_RS23840
subclass of: SO_0000673
so part of: TS85_RS23840
location: 32506..33372
location: region:32506-33372:1
so has part: feature:32506-33372:1:exon

WP_044337118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32506-33372:1:exon

TS85_RS23845
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS23845
old locus tag: TS85_23840
so part of: sequence
location: complement(33429..34001)
location: region:33429-34001:-1
so has part: feature:33429-34001:-1:exon
subclass of: SO_0000010

position:33429:-1
position: 33429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34001:-1
position: 34001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33429-34001:-1:exon

TS85_RS23845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS23845
old locus tag: TS85_23840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009856338.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-sedoheptulose 7-phosphate isomerase
translation: MSLFLANLAEHREVFARLDALSTIVAEASGAATASLRAGNKVMFCGNGGSAADSQHLAAELTGRFIKDRPPLAGLALNTDSSALTCIGNDYSFADVFVRQVRGLGRTGDCLVGISTSGNSANVLRAFEAAREMGITTIGFLGRDGGQIKALSDYAIIVPSDVTARIQEAHILIGHTLCGLVEQQLGLVEA
SIO_010081: TS85_RS23845
subclass of: SO_0000673
so part of: TS85_RS23845
location: complement(33429..34001)
location: region:33429-34001:-1
so has part: feature:33429-34001:-1:exon

WP_044337120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33429-34001:-1:exon

TS85_RS23850
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
gene: rfaE2
locus tag: TS85_RS23850
old locus tag: TS85_23845
so part of: sequence
location: 34066..34548
location: region:34066-34548:1
so has part: feature:34066-34548:1:exon
subclass of: SO_0000010

position:34066:1
position: 34066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34548:1
position: 34548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34066-34548:1:exon

TS85_RS23850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
gene: rfaE2
locus tag: TS85_RS23850
old locus tag: TS85_23845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018006662.1
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase
translation: MLGNILWPADGVAAVHAAIARLPRPLVFTNGVFDILHRGHVEYLADARALGAALIVAVNSDASARMLGKGPDRPLNREQDRAIVLTALESVSLVLGFDEKTPCALLQSVRPDLYVKGGDYDMETLEETRLIRSWGGDSVAIPFRDGFSTTNLVDRIRQTA
SIO_010081: TS85_RS23850
subclass of: SO_0000673
so part of: TS85_RS23850
location: 34066..34548
location: region:34066-34548:1
so has part: feature:34066-34548:1:exon

WP_044337122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34066-34548:1:exon

TS85_RS23855
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
gene: gmhB
locus tag: TS85_RS23855
old locus tag: TS85_23850
so part of: sequence
location: 34545..35111
location: region:34545-35111:1
so has part: feature:34545-35111:1:exon
subclass of: SO_0000010

position:34545:1
position: 34545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35111:1
position: 35111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34545-35111:1:exon

TS85_RS23855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
gene: gmhB
locus tag: TS85_RS23855
old locus tag: TS85_23850
EC number: 3.1.3.82
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019616241.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
translation: MTTGTAKRAAFLDRDGVINVDTGYVGRTQDFVFAPGAKAALARLSAAGYLLVVVTNQSGIGRGYYSEADFADLTAHMCAELQAAGAPVARVLHCPHLPDTDCTCRKPAPGMVLAAASALGIDLQRSAMIGDKPSDMAAGRAAGVARCYLVSSRTETSPLADARFATLAECVDHALEESSATDFAKGVD
SIO_010081: TS85_RS23855
subclass of: SO_0000673
so part of: TS85_RS23855
location: 34545..35111
location: region:34545-35111:1
so has part: feature:34545-35111:1:exon

WP_044337124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34545-35111:1:exon

TS85_RS25725
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS25725
so part of: sequence
location: 35319..35522
location: region:35319-35522:1
so has part: feature:35319-35522:1:exon
subclass of: SO_0000010

position:35319:1
position: 35319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35522:1
position: 35522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35319-35522:1:exon

TS85_RS25725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS25725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKAIDNMEDSIAPTSAATPVAPQEAVSIRSRLRSNNFDELRLIFASMVMPTVNRERRRRMCKDPAC
SIO_010081: TS85_RS25725
subclass of: SO_0000673
so part of: TS85_RS25725
location: 35319..35522
location: region:35319-35522:1
so has part: feature:35319-35522:1:exon

WP_155006629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35319-35522:1:exon

TS85_RS25730
type: Gene
subclass of: SO_0000704
RO_0002162: 1609977
locus tag: TS85_RS25730
so part of: sequence
location: 35516..36814
location: region:35516-36814:1
so has part: feature:35516-36814:1:exon
subclass of: SO_0000010

position:35516:1
position: 35516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36814:1
position: 36814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35516-36814:1:exon

TS85_RS25730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1609977
locus tag: TS85_RS25730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNLVAVMALSMQILAPYLVWRSRWNIPTHIAAGFCMSAYVIPGLLTNLWDGFPSETVNLFIVINVIGGLALCAGTLIGSFFARGKGDYIFQSTSRMIKDTSPMTRRVLIVTVPCVIGMCAAYSIMGFVPMFAEDPFTARQFKGEYRDAYYRAAYLFRFCFSVLQATMPLLLVIGWYRRSPFLIFLALASFTVLLVSLARGPTATGVIFFLGILAANSRGGLKWYIPLILLIFPFGSVFYYILGNILDVEVFRSIYVGDTLSQFIANGSPDILDQLNWLHGFSKGDYFSMGRTIFGGLVPNNYQWNPQVWTLTYDDIGANISELATGGLRLTTAEWGYANFGWIGVVLIPLISGIISGSLIEKIKSVLPNLNILQATSALVLYSTIGTFMVQWYILSIHSLPAVAVAVYYWRANARKTNGRPQTASSVAQNR
SIO_010081: TS85_RS25730
subclass of: SO_0000673
so part of: TS85_RS25730
location: 35516..36814
location: region:35516-36814:1
so has part: feature:35516-36814:1:exon

WP_155006630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35516-36814:1:exon