Loigolactobacillus bifermentans strain LB003 plasmid unnamed2, complete sequence.
type: Entry
definition: Loigolactobacillus bifermentans strain LB003 plasmid unnamed2, complete sequence.
sequence version: NZ_CP045874.1
sequence date: 2023-03-17
sequence: sequence
division: CON
label: NZ_CP045874.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN13111358
keyword: RefSeq
source: Loigolactobacillus bifermentans
organism: Loigolactobacillus bifermentans
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Loigolactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP045874.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: PacBio SMRT Analysis v. v2.3\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 284.03x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/17/2023 01:33:58\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,233\nCDSs (total) :: 3,145\nGenes (coding) :: 3,102\nCDSs (with protein) :: 3,102\nGenes (RNA) :: 88\nrRNAs :: 5, 6, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 6, 5 (5S, 16S, 23S)\ntRNAs :: 68\nncRNAs :: 4\nPseudo Genes (total) :: 43\nCDSs (without protein) :: 43\nPseudo Genes (ambiguous residues) :: 0 of 43\nPseudo Genes (frameshifted) :: 14 of 43\nPseudo Genes (incomplete) :: 25 of 43\nPseudo Genes (internal stop) :: 9 of 43\nPseudo Genes (multiple problems) :: 5 of 43\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 31839
topology: circular
so has quality: SO_0000988
location: 1..31839
location: region:1-31839:1
RO_0002162: 1607

NZ_CP045874
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN13111358
type: BioSample
SIO_000068: biosample

1
title: Genome sequencing of Lactobacillus bifermentans
author: Kim, K.
journal: Unpublished

2
title: Direct Submission
author: Kim, K.
journal: Submitted (04-NOV-2019) College of Health Science, Korea University, Anam-ro 145, Seoul 02841, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31839:1
position: 31839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-31839:1:source
so part of: sequence
organism: Loigolactobacillus bifermentans
mol type: genomic DNA
strain: LB003
isolation source: blown cheese
plasmid: unnamed2
collection date: 1972-04-27

1607
type: Taxonomy
SIO_000068: taxonomy

LB003_RS15990
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS15990
old locus tag: LB003_15985
so part of: sequence
location: 1..288
location: region:1-288:1
so has part: feature:1-288:1:exon
subclass of: SO_0000010

position:288:1
position: 288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-288:1:exon

LB003_RS15990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS15990
old locus tag: LB003_15985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015638790.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
SIO_010081: LB003_RS15990
subclass of: SO_0000673
so part of: LB003_RS15990
location: 1..288
location: region:1-288:1
so has part: feature:1-288:1:exon

WP_003688751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-288:1:exon

LB003_RS15995
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS15995
old locus tag: LB003_15990
so part of: sequence
location: 312..1190
location: region:312-1190:1
so has part: feature:312-1190:1:exon
subclass of: SO_0000010

position:312:1
position: 312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190:1
position: 1190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312-1190:1:exon

LB003_RS15995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS15995
old locus tag: LB003_15990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680947.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKINQELRSKGYKIAERTVGKYMRELGIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIRLIEKTKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTQIQNLVVA
SIO_010081: LB003_RS15995
subclass of: SO_0000673
so part of: LB003_RS15995
location: 312..1190
location: region:312-1190:1
so has part: feature:312-1190:1:exon

WP_057904125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312-1190:1:exon

LB003_RS16000
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16000
old locus tag: LB003_15995
pseudo: true
so part of: sequence
location: <1246..1623
location: region:1246-1623:1
so has part: feature:1246-1623:1:exon
subclass of: SO_0000010

position:1246:1
position: 1246
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1623:1
position: 1623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246-1623:1:exon

LB003_RS16000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16000
old locus tag: LB003_15995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30-like element ISLpl1 family transposase
SIO_010081: LB003_RS16000
subclass of: SO_0000673
so part of: LB003_RS16000
location: <1246..1623
location: region:1246-1623:1
so has part: feature:1246-1623:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1246-1623:1:exon

LB003_RS16005
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16005
old locus tag: LB003_16000
so part of: sequence
location: complement(1661..1960)
location: region:1661-1960:-1
so has part: feature:1661-1960:-1:exon
subclass of: SO_0000010

position:1661:-1
position: 1661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960:-1
position: 1960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1661-1960:-1:exon

LB003_RS16005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16005
old locus tag: LB003_16000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSKKPNILQRRVTGAVKPSEEYHATDNATKKENKSSSMPKNQKKSLKVSAETYKDMKVLKTIEHVSFDYEIIQLLIDQYYKDMTEEQQRRYTVLRENM
SIO_010081: LB003_RS16005
subclass of: SO_0000673
so part of: LB003_RS16005
location: complement(1661..1960)
location: region:1661-1960:-1
so has part: feature:1661-1960:-1:exon

WP_016526703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1661-1960:-1:exon

LB003_RS16010
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16010
old locus tag: LB003_16005
so part of: sequence
location: complement(1962..2822)
location: region:1962-2822:-1
so has part: feature:1962-2822:-1:exon
subclass of: SO_0000010

position:1962:-1
position: 1962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2822:-1
position: 2822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1962-2822:-1:exon

LB003_RS16010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16010
old locus tag: LB003_16005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013356270.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDIPDVVKAIQSRDEALTIVIGNQKGGVGKTTNTYLIAYTLAKMGIHTLVADLDPQANATKTLMLTKSQQEDTVYSIKKTLMVGVQEKDLTDLPVKIMDNLDLIPSYIDFQDFTKYLYQNTNNEYEETHLLEPLFNPLKKKYDVILLDVPPFSIEITRNAVIFSDFALISLQTHDDSLSGAEEYVNTLSKLQQEYQLDIEVIGILPMLHDARNGVDQTIIQSAKDEFGEENVFTNIVTQMARIKRFPINGITDKDRFDKRVLDKYQQVTDELLSRIGLFIDDKEAK
SIO_010081: LB003_RS16010
subclass of: SO_0000673
so part of: LB003_RS16010
location: complement(1962..2822)
location: region:1962-2822:-1
so has part: feature:1962-2822:-1:exon

WP_013356270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1962-2822:-1:exon

LB003_RS16020
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16020
old locus tag: LB003_16015
pseudo: true
so part of: sequence
location: <4390..4716
location: region:4390-4716:1
so has part: feature:4390-4716:1:exon
subclass of: SO_0000010

position:4390:1
position: 4390
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:4716:1
position: 4716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4390-4716:1:exon

LB003_RS16020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16020
old locus tag: LB003_16015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016527414.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: plasmid replication initiation protein
SIO_010081: LB003_RS16020
subclass of: SO_0000673
so part of: LB003_RS16020
location: <4390..4716
location: region:4390-4716:1
so has part: feature:4390-4716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4390-4716:1:exon

LB003_RS16320
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16320
old locus tag: LB003_16020
pseudo: true
so part of: sequence
location: 4872..5070
location: region:4872-5070:1
so has part: feature:4872-5070:1:exon
subclass of: SO_0000010

position:4872:1
position: 4872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5070:1
position: 5070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4872-5070:1:exon

LB003_RS16320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16320
old locus tag: LB003_16020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003691009.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: LB003_RS16320
subclass of: SO_0000673
so part of: LB003_RS16320
location: 4872..5070
location: region:4872-5070:1
so has part: feature:4872-5070:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4872-5070:1:exon

LB003_RS16030
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16030
old locus tag: LB003_16025
so part of: sequence
location: 5121..5942
location: region:5121-5942:1
so has part: feature:5121-5942:1:exon
subclass of: SO_0000010

position:5121:1
position: 5121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5942:1
position: 5942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5121-5942:1:exon

LB003_RS16030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16030
old locus tag: LB003_16025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003649841.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MTKTQAYMDKYQFTVAENKRFARTNFTKLVHTSARFEGVNTTLPQTQTIMDGMSVAGVPVEDILTIVNLKRGWQYITDQNSSLTLTMEKQINKIVAAEDALVPGELRQGKGGVDLGSEDFFEPPLINEKQEQSFLQKILADPQTTTTDKALTVMYHNMRQQIFWDGNKRTATLSANKIMIDGGAGLINVPLDKWDQWNELIANYYRTNDMAKIKRWTYDNGIQGLQIRANLELKSVEDEIGKRIQEQLKDFADQNPEIKPKNDPENKNDRPSY
SIO_010081: LB003_RS16030
subclass of: SO_0000673
so part of: LB003_RS16030
location: 5121..5942
location: region:5121-5942:1
so has part: feature:5121-5942:1:exon

WP_057904516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5121-5942:1:exon

LB003_RS16035
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16035
old locus tag: LB003_16030
so part of: sequence
location: complement(5932..6210)
location: region:5932-6210:-1
so has part: feature:5932-6210:-1:exon
subclass of: SO_0000010

position:5932:-1
position: 5932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6210:-1
position: 6210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5932-6210:-1:exon

LB003_RS16035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16035
old locus tag: LB003_16030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNQYEKLVEQQARLKQKIEREDFKLRQSKYYESRQDRKARSRRLIQKGALLEKYFQADNLSVEQTEELLKTFADYVNAHKPNKLKNDQPNN
SIO_010081: LB003_RS16035
subclass of: SO_0000673
so part of: LB003_RS16035
location: complement(5932..6210)
location: region:5932-6210:-1
so has part: feature:5932-6210:-1:exon

WP_057904517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5932-6210:-1:exon

LB003_RS16040
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16040
old locus tag: LB003_16035
so part of: sequence
location: complement(6233..6460)
location: region:6233-6460:-1
so has part: feature:6233-6460:-1:exon
subclass of: SO_0000010

position:6233:-1
position: 6233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6460:-1
position: 6460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6233-6460:-1:exon

LB003_RS16040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16040
old locus tag: LB003_16035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGGIVMSQSNLEKKEAKLKALNQKIKDEKNKIEQRLGKQIISQSNLDYANLSNDQIKLLAKQFSEFLKVKSVDH
SIO_010081: LB003_RS16040
subclass of: SO_0000673
so part of: LB003_RS16040
location: complement(6233..6460)
location: region:6233-6460:-1
so has part: feature:6233-6460:-1:exon

WP_191992485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6233-6460:-1:exon

LB003_RS16045
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
gene: mobQ
locus tag: LB003_RS16045
old locus tag: LB003_16040
so part of: sequence
location: 6713..8773
location: region:6713-8773:1
so has part: feature:6713-8773:1:exon
subclass of: SO_0000010

position:6713:1
position: 6713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8773:1
position: 8773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6713-8773:1:exon

LB003_RS16045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
gene: mobQ
locus tag: LB003_RS16045
old locus tag: LB003_16040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016511122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIFHMSFSNISAGKGRSAIASAAYRSGEKLFDDKECRHYFYTRSVMPESFILIPKNAPAWASNREQLWNEVEKKDRKSNSRYAKEFNVALPIELSVDEQKTLLTKYVQENFVDQGMVADVAIHRDHQDNPHAHVMLTNRPFNPDGTWGQKTKTEYILDSHGNKTKTPAGNVRNRKIWLVDWDKKEKITEWRHNWAASVNQALEQKNIPDRISEKSFVEQGIADTPMQHEGINSKRHERKAFNQQVKNYRKSKDGYKNMQEKVVNRGHLDSLSKHFSFNEKKVVKELSHELKTYISLESLDDKRRMLFNWKNSILIKHAVGEDVTKQLLTINQQESSLKKADELLNKVVDRTTKKLYPELDFEQTTAAERRELIKETNSEQTIFKGSELNERLMNIRDDLLTRQLLTFTKRPYVGWKLLMQQEKEVKIELKYTLMIHDDSLESLEHVDQGLLEKYSPTEQQKITRAVKDLRAIMAVKQVIKTQYHEVLKRAFPKGDLDGLPLIKQEQVYTAVMYYDPVLKPCQSETIEQWQANPPQVFSPPEHQQGLAYLSGQLSLDQLENHHLQRVLKHDGTKQLFFGECKADPTIKNSQIEKIQKQLKEQQAKDDQYRKANIGHYQPLNYKPVSPDYYLKTAFSDAIMTVLYARDEDYQRQEQERGLKETEWEMTKKQRQHQTRNRHEDGGMHL
SIO_010081: LB003_RS16045
subclass of: SO_0000673
so part of: LB003_RS16045
location: 6713..8773
location: region:6713-8773:1
so has part: feature:6713-8773:1:exon

WP_155797903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6713-8773:1:exon

LB003_RS16050
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16050
old locus tag: LB003_16045
so part of: sequence
location: complement(8848..9768)
location: region:8848-9768:-1
so has part: feature:8848-9768:-1:exon
subclass of: SO_0000010

position:8848:-1
position: 8848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9768:-1
position: 9768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8848-9768:-1:exon

LB003_RS16050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16050
old locus tag: LB003_16045
function: 4.5 Transposon and IS
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011373852.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30-like element ISLsa1 family transposase
translation: MGTSTLSRFQRGALAQLVNEGNKSYQVMADALGVAKATISYELDRVKPYDPELAQQDADRKRRNCGRRSMLTAALATLITNHLRLTWSPETIAAAYNLSTASIYNWLNRGWLPFKLTDLPNRNVRQHRVSENRGKFTSGTSIEQRPTTVNQRLAFGHWEVDTVLSSRSESRSCLVTFVERKTRLLWAIKAPNRTAKALNTAFGKFMGAFGPQVKSITVDHGKEFANYQALEQDYQIKVYFCHPYSPWERGSNEYFNRRLRWFFPKKTNFSQVTTDEILAALELINQRPLKIHHQQTAIERFRACSD
SIO_010081: LB003_RS16050
subclass of: SO_0000673
so part of: LB003_RS16050
location: complement(8848..9768)
location: region:8848-9768:-1
so has part: feature:8848-9768:-1:exon

WP_011373852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8848-9768:-1:exon

LB003_RS16055
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16055
old locus tag: LB003_16050
so part of: sequence
location: complement(10299..11609)
location: region:10299-11609:-1
so has part: feature:10299-11609:-1:exon
subclass of: SO_0000010

position:10299:-1
position: 10299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11609:-1
position: 11609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10299-11609:-1:exon

LB003_RS16055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16055
old locus tag: LB003_16050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015638851.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MATLPEKRVNFNPKLHISHTGGELSTDAGLVLVKELMAQLNFTTLAYQLVHFDDQRHYARYSNVSLLEQVVLQLIAGYPADLAATNLRNDPTFKLLLAQPQLASQPSLSRFWQRCDEQTITSLQTLNQALLDQAWTGAKQQQLILDIDSTHADTHGHQEKTAFNAHYGTTGYHPLVAFDGQTGHCLKAQLRPGNVYTSTDIAPFITPLLQHYHQVKPNADILVRGDSGFATPELYETCEANDTFYLIRLKANRRLNQLAERFVQISDEQNWTETEVHYYRASYQARSWPKPRQIYIKSTRPAGELLFQHEYLVSNLTSFVAEDAFQAYHQRGQMENYIKEAKAGFYLDKMTSSQFIPNYARMMLSVLAYNLVSLMRQLLPVQHQRLQVTTLRLWLFKVAGKLVTSGRQLYLKLSRHHVYQDLFYQLLARIQALQWG
SIO_010081: LB003_RS16055
subclass of: SO_0000673
so part of: LB003_RS16055
location: complement(10299..11609)
location: region:10299-11609:-1
so has part: feature:10299-11609:-1:exon

WP_057903464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10299-11609:-1:exon

LB003_RS16060
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16060
old locus tag: LB003_16055
so part of: sequence
location: complement(11688..12482)
location: region:11688-12482:-1
so has part: feature:11688-12482:-1:exon
subclass of: SO_0000010

position:11688:-1
position: 11688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12482:-1
position: 12482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11688-12482:-1:exon

LB003_RS16060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16060
old locus tag: LB003_16055
inference: COORDINATES: protein motif:HMM:NF024183.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc ribbon domain-containing protein
translation: MICNHCGTENDATAKFCIYCGHALIGPESAPKQEAHSTNQCPNCGTENTPSAKYCVSCGHALTPSKHVQDSQTTTTQASTKSQSTARNTSSPNTSSHSYFLLKLVIVVAILIFAIPKGYAYIQQAMIPKGSADYDTIIDHVTKHDGQDIMILQMKDLLNQATVNESPSVFIEKNKDTGRYIFPIKIAKKKTYCYVVKVIDQFYADGSYKYAYVAVSLDKNKKNKYENKLLDPNHFEPELFTISSPSTVSPRYHGRYCVFYFSPF
SIO_010081: LB003_RS16060
subclass of: SO_0000673
so part of: LB003_RS16060
location: complement(11688..12482)
location: region:11688-12482:-1
so has part: feature:11688-12482:-1:exon

WP_155797904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11688-12482:-1:exon

LB003_RS16065
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16065
old locus tag: LB003_16060
so part of: sequence
location: complement(12503..12955)
location: region:12503-12955:-1
so has part: feature:12503-12955:-1:exon
subclass of: SO_0000010

position:12503:-1
position: 12503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12955:-1
position: 12955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12503-12955:-1:exon

LB003_RS16065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16065
old locus tag: LB003_16060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSTTIASIEKNEMRLTKAYPKSNNSSTTASSSSSNSQTQHRKLTANEIGNLYVKQLRIHHYLNNRYVEIIVLRNTSTGGYTFTDPSHARIKIYILQVTTNNKTNLQSILVNRPQDATLMNPLDSERAQSAFDFEASTFDAVYSNNKRIN
SIO_010081: LB003_RS16065
subclass of: SO_0000673
so part of: LB003_RS16065
location: complement(12503..12955)
location: region:12503-12955:-1
so has part: feature:12503-12955:-1:exon

WP_155797905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12503-12955:-1:exon

LB003_RS16070
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16070
old locus tag: LB003_16065
so part of: sequence
location: complement(13462..14568)
location: region:13462-14568:-1
so has part: feature:13462-14568:-1:exon
subclass of: SO_0000010

position:13462:-1
position: 13462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14568:-1
position: 14568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13462-14568:-1:exon

LB003_RS16070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16070
old locus tag: LB003_16065
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010498527.1
GO function: GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PrsW family glutamic-type intramembrane protease
translation: MTEYIYCTQCGAKNAATNNFCTACGQSLVSSSVHHDQETRQTQAPNTSFIDNTTKQLNRWTGEDKSVSLNVASMFGGIFEHHTQQDAEEIFIAGTFKTTPSLAEVSDAPVRPWLFSRILMLFVVVIGLFLSALMFFQGEKTYPGLVFISSCAIPFSLLILFFEINVFKNISIYVTMKVFLLGGAFSLLTTLFLYSIVGASNFSIVEAILIGLVEETGKLIIVIYYVEHYNLSHIFNGMLIGAAVGAGFAAFENAGYAQDYGISVLLIRSIGSLGTHTLWCAILGAALVIVKRDHHFDSSMLVDPHFINFFIFVVTLHAVWDMNLPLTSVKVTGLIVMAWIAILVLINAGLREVGELQRGKVKIPKSEL
SIO_010081: LB003_RS16070
subclass of: SO_0000673
so part of: LB003_RS16070
location: complement(13462..14568)
location: region:13462-14568:-1
so has part: feature:13462-14568:-1:exon

WP_235807532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13462-14568:-1:exon

LB003_RS16075
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16075
old locus tag: LB003_16070
so part of: sequence
location: complement(14568..14885)
location: region:14568-14885:-1
so has part: feature:14568-14885:-1:exon
subclass of: SO_0000010

position:14885:-1
position: 14885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14568-14885:-1:exon

LB003_RS16075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16075
old locus tag: LB003_16070
inference: COORDINATES: protein motif:HMM:NF024183.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc ribbon domain-containing protein
translation: MNYCTQCGHQNRAHAKFCVTCGHQLTTPSATIVTQQKSTRLLTIGIISALLALIVTPPLFGTIAIVLGSIVARHHPYQGYGLITAAILTLIIGSAVGIFMTGWWI
SIO_010081: LB003_RS16075
subclass of: SO_0000673
so part of: LB003_RS16075
location: complement(14568..14885)
location: region:14568-14885:-1
so has part: feature:14568-14885:-1:exon

WP_057905953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14568-14885:-1:exon

LB003_RS16080
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16080
old locus tag: LB003_16075
pseudo: true
so part of: sequence
location: <14949..15146
location: region:14949-15146:1
so has part: feature:14949-15146:1:exon
subclass of: SO_0000010

position:14949:1
position: 14949
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:15146:1
position: 15146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14949-15146:1:exon

LB003_RS16080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16080
old locus tag: LB003_16075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003717181.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sugar nucleotide-binding protein
SIO_010081: LB003_RS16080
subclass of: SO_0000673
so part of: LB003_RS16080
location: <14949..15146
location: region:14949-15146:1
so has part: feature:14949-15146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14949-15146:1:exon

LB003_RS16085
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16085
old locus tag: LB003_16080
so part of: sequence
location: complement(15855..16436)
location: region:15855-16436:-1
so has part: feature:15855-16436:-1:exon
subclass of: SO_0000010

position:15855:-1
position: 15855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16436:-1
position: 16436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15855-16436:-1:exon

LB003_RS16085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16085
old locus tag: LB003_16080
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MIFCSGSYRYFSYGCSIDPDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMATDLVLKTLESAVKNRTITGDLIIHTDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFEDYETAAAVLFEYVHAFYNRKRIHSSLGYQTPLQVEIATLTSQMAA
SIO_010081: LB003_RS16085
subclass of: SO_0000673
so part of: LB003_RS16085
location: complement(15855..16436)
location: region:15855-16436:-1
so has part: feature:15855-16436:-1:exon

WP_275689639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15855-16436:-1:exon

LB003_RS16090
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16090
old locus tag: LB003_16085
so part of: sequence
location: complement(16544..19537)
location: region:16544-19537:-1
so has part: feature:16544-19537:-1:exon
subclass of: SO_0000010

position:16544:-1
position: 16544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19537:-1
position: 19537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16544-19537:-1:exon

LB003_RS16090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16090
old locus tag: LB003_16085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011222049.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPTNPHHQQSFGTFEGVPSADQLRLYFQLTDFDRALIDEMRSATTKLGFAVQLSSVRFLGTFPTNLQQVPAEVIDYLAKQLTIDGRALAGYTRKMTISQHMTLIKRKYHYQAFTDPAVKASLNDWLLERARFTTETEKLLFDMLLKKCLDEKILLPGVTTFERFINGVTEVAADLLDSQLVAVPSVEETDRLLNLLTAVGEPIYGATIKMDLLRNPLMDESRKEINRGFTRLKQFQQFKTEDWQLGAIPAGKLKNLANYAFKAKASLIKRMSVKRQTALLVAFVSEYRKRAMDEQLLALSRFYETLFKRAKKKEAKERLRTIKDLDHAALTLSQIVRLLMDETISSQDLRNKVLATYPPEIIESAVTQINQLVRNEREPIAIEELLNAYRKFRKFIPDILATIVFEGTINGQDCLIVWEFIRQRFPRPVTYRMFEQIAEKLPKKWRYYIRENPKVTNQCVLIAGIELLVHGLKRHDIYVRQSNRYLDPMACLIDKSTWRQQKAVLIQQLDLPQTGQAAVEAVKQDLALSYAETLKNWADSEMAQVKEVDGQEKIIVAKLRKAREQKDEAAFKSRVRHLIPKIDLSDILLEVNQQLQLTQCFSHVSESETKMKHVDISILAVLLAEACNIGLSPVAKNSSNSLKYDRLMYVDHQYLRIDTLAAANRRIINAHKKLKSALIWGDGQMASADGIRYVTPQRSLYSRSNPKYFGRGRGITFYNFVSDQYIGFHGMVVAGTLRDSLYLLEGFLNQGSSLEPTQIMTDTAGYSDLVFGLFGLLGFQFSPRIANSQGTKLWRIDSTADYQVLNGVSQNRINLKLIEEHWEDILRVAGSLKSGKVNATELTQALQREGHPTALGKAITEYGKVYKTKHQLRYLSDELYARQILEQLNKGEARHALCRNIFYGRKGKLYQTYFDGMEEQLNALSLVTNAIIYWNTVYLEKIVTQMQSEGFDCSDDMIGKLSPLMFEHINFVGKYTFQYNEALENGHLRPLDEADEK
SIO_010081: LB003_RS16090
subclass of: SO_0000673
so part of: LB003_RS16090
location: complement(16544..19537)
location: region:16544-19537:-1
so has part: feature:16544-19537:-1:exon

WP_057904571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16544-19537:-1:exon

LB003_RS16095
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16095
old locus tag: LB003_16090
so part of: sequence
location: 19716..20312
location: region:19716-20312:1
so has part: feature:19716-20312:1:exon
subclass of: SO_0000010

position:19716:1
position: 19716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20312:1
position: 20312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19716-20312:1:exon

LB003_RS16095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16095
old locus tag: LB003_16090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003582117.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MIIGYARVSKDDQNLNRQIDQLTAYGAEKIIQEKFTGTRQKRPGITQLLQTIRAHDVVVVESISRLGRNTLDILNLIQLLHQKQIKFVSLKEQMDTETPTGRAMLQMMSVIAELERNLLADRVKEGIAASRKRGVTVGRPRIAQEKLDIAIRMYQSGDYSVKEILATNQISSGTFYREVNRLKLKKLKRKDDPSASHN
SIO_010081: LB003_RS16095
subclass of: SO_0000673
so part of: LB003_RS16095
location: 19716..20312
location: region:19716-20312:1
so has part: feature:19716-20312:1:exon

WP_057904570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19716-20312:1:exon

LB003_RS16100
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16100
old locus tag: LB003_16095
so part of: sequence
location: 20435..20758
location: region:20435-20758:1
so has part: feature:20435-20758:1:exon
subclass of: SO_0000010

position:20435:1
position: 20435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20758:1
position: 20758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20435-20758:1:exon

LB003_RS16100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16100
old locus tag: LB003_16095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003582114.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MDYQNYVQMLKAMADPNRLKIIDLLSCGSLCACDILQHFDFSQPTLSHHMKVLQNAGIVFTVKDGKWQHYSLQKRFVQEFKQNTDQLLAADEHCLCQRSDCEKDVAN
SIO_010081: LB003_RS16100
subclass of: SO_0000673
so part of: LB003_RS16100
location: 20435..20758
location: region:20435-20758:1
so has part: feature:20435-20758:1:exon

WP_057904569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20435-20758:1:exon

LB003_RS16105
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
gene: arsA
locus tag: LB003_RS16105
old locus tag: LB003_16100
so part of: sequence
location: 20810..22540
location: region:20810-22540:1
so has part: feature:20810-22540:1:exon
subclass of: SO_0000010

position:20810:1
position: 20810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22540:1
position: 22540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20810-22540:1:exon

LB003_RS16105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
gene: arsA
locus tag: LB003_RS16105
old locus tag: LB003_16100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016368213.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO process: GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenical pump-driving ATPase
translation: MEKYSPQEINLTKYLFFTGKGGVGKTTVASATAISLADAGHRVMIVSTDPASNLQDVFKVSLTNQPKPIPNISGLFAANFDPVIAANEYREQVIQPYRGVLPKEAIQNMAEQLSGSCTVEIAAFNEFANFLTSSKINQQFDYIIFDTAPTGHTLRMLQLPSAWSNYLDKNDRGASCLGQLAGLNDKKAMYQKAVETLGNPQATTLFLVTRPQKGALLEAQRASHELAALNIKNQQLIINGILNQPTDAVSQTIFKQQQADLQNMPVTLDQLPKVAIPLRAYNVLGLANLRLLLKDQQPQITEEPVTASHFPDLDVVVKNLVQSNKKIIFTMGKGGVGKTTVAVQIAQKIAAQHKTVHLATTDPADHLKYFKITSPLIKVSHIDEKKSLKEYQNEVLTTAKKTMKSNDVDYVAEDLRSPCTQEIAVFRAFAELVAQNDSDVVVVDTAPTGHTLLLLNSTQSYAQEVAHTSGSVPQAVVNLLPRLQDPKQTEIVMVTLPEATPVYESMRLDDDLKRASLAHTWWVVNQSMLATQTTDPCLLARVQSEVKWIDQVKELSNNHFAVMQWQPNYEKTLLTV
SIO_010081: LB003_RS16105
subclass of: SO_0000673
so part of: LB003_RS16105
location: 20810..22540
location: region:20810-22540:1
so has part: feature:20810-22540:1:exon

WP_057904572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20810-22540:1:exon

LB003_RS16110
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16110
old locus tag: LB003_16105
so part of: sequence
location: 22583..23878
location: region:22583-23878:1
so has part: feature:22583-23878:1:exon
subclass of: SO_0000010

position:22583:1
position: 22583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23878:1
position: 23878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22583-23878:1:exon

LB003_RS16110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16110
old locus tag: LB003_16105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003682896.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenic transporter
translation: MQVFFAVGIFLLTLLFVIWQPRGLSIGWTAVGGAILALLFGVVSFKDVGTVTGIVWNATLSFVAIILISLILDQIGFFEWAALYMARWANGHGIRMFILVTTLGAVVAALFANDGAALILTPIVLAMVRALHFDEKQVFPFIIASGFIADTTSLPMIVSNLVNIVSADFFGISFSAYALRMWIPDLFSLLGSIGILYLYFRKALPRKFDATQVAEPSSALKDQRLFKFSWVVLILLLIGYFSSGFLGIPVSFIALSIAAIFLIVGQRSSHVNAMAAIKGAPWNIVFFSIGMYVVVYGLQNVGLTTLLSGVITEIAKGGRFAATMGMGYLAALLSSLMNNMPTVMINALSIKGADVSGLIHHTLVYANIIGSDLGPKITPIGSLATLVWLHVLAQKGVKIKWGTYFKIGIVTTIPVLFITLCGLWLSLSIFG
SIO_010081: LB003_RS16110
subclass of: SO_0000673
so part of: LB003_RS16110
location: 22583..23878
location: region:22583-23878:1
so has part: feature:22583-23878:1:exon

WP_057904568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22583-23878:1:exon

LB003_RS16115
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
gene: arsD
locus tag: LB003_RS16115
old locus tag: LB003_16110
so part of: sequence
location: 23915..24250
location: region:23915-24250:1
so has part: feature:23915-24250:1:exon
subclass of: SO_0000010

position:23915:1
position: 23915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24250:1
position: 24250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23915-24250:1:exon

LB003_RS16115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
gene: arsD
locus tag: LB003_RS16115
old locus tag: LB003_16110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013721068.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenite efflux transporter metallochaperone ArsD
translation: MKKIELFEPAMCCSTGVCGPSVDKELIQTTAIQRYVSVNAQGQAMFIRRNLAQNPDAFVRNPIVAQELKRQGINALPITLVDGQLVKTGEYPTINEFSSYLDMDLVAALVH
SIO_010081: LB003_RS16115
subclass of: SO_0000673
so part of: LB003_RS16115
location: 23915..24250
location: region:23915-24250:1
so has part: feature:23915-24250:1:exon

WP_025013532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23915-24250:1:exon

LB003_RS16120
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
gene: arsC
locus tag: LB003_RS16120
old locus tag: LB003_16115
so part of: sequence
location: 24273..24689
location: region:24273-24689:1
so has part: feature:24273-24689:1:exon
subclass of: SO_0000010

position:24273:1
position: 24273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24689:1
position: 24689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24273-24689:1:exon

LB003_RS16120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
gene: arsC
locus tag: LB003_RS16120
old locus tag: LB003_16115
EC number: 1.20.4.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004563097.1
GO function: GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenate reductase (thioredoxin)
translation: MTQIYFLCTGNACRSQMAEGFAKKILGNDWRVASAGVEVHGLNPLAVKVMAEKGIDISQQTSKLIDPDYLLHSDLVVTLCGDARDRCPVTPPTVKKKHWPLPDPALAAGSEQDRIVVFRKVRDQIEQQIIDLAKVGNL
SIO_010081: LB003_RS16120
subclass of: SO_0000673
so part of: LB003_RS16120
location: 24273..24689
location: region:24273-24689:1
so has part: feature:24273-24689:1:exon

WP_004563097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24273-24689:1:exon

LB003_RS16125
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16125
old locus tag: LB003_16120
pseudo: true
so part of: sequence
location: <24796..25806
location: region:24796-25806:1
so has part: feature:24796-25806:1:exon
subclass of: SO_0000010

position:24796:1
position: 24796
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:25806:1
position: 25806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24796-25806:1:exon

LB003_RS16125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16125
old locus tag: LB003_16120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010373596.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: APC family permease
SIO_010081: LB003_RS16125
subclass of: SO_0000673
so part of: LB003_RS16125
location: <24796..25806
location: region:24796-25806:1
so has part: feature:24796-25806:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24796-25806:1:exon

LB003_RS16130
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16130
old locus tag: LB003_16125
so part of: sequence
location: 26096..27049
location: region:26096-27049:1
so has part: feature:26096-27049:1:exon
subclass of: SO_0000010

position:26096:1
position: 26096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27049:1
position: 27049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26096-27049:1:exon

LB003_RS16130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16130
old locus tag: LB003_16125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017369030.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MTDRISLEKAAIEFSDANAPHPRIYELEPKAGRALLEEVQSSKITKQPADITDLPVDTGKWGTINVRVIRPEKNDAVLPVIFYIHGAGWVFGSAKTHDKLARELAVRTNSAVVFPEYSLSPEAKYPTAIEQNYAVLQKLPELKDKFKLDVTKLTVAGDSVGGNMSTVMTIMTKQRKGLKINQQVLYYPVTDADFGTGSYLEFADNYYLTRDGMKWFWDQYTERDTDRADITASPLRATLADLKDLPAALILTDEADVLRDEGEAYARKLRDAGVEVTQARFQGMIHDFVMLNVLDQTNAARAAMTLSTDWINQKNNG
SIO_010081: LB003_RS16130
subclass of: SO_0000673
so part of: LB003_RS16130
location: 26096..27049
location: region:26096-27049:1
so has part: feature:26096-27049:1:exon

WP_057904520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26096-27049:1:exon

LB003_RS16135
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16135
old locus tag: LB003_16130
so part of: sequence
location: 27899..28930
location: region:27899-28930:1
so has part: feature:27899-28930:1:exon
subclass of: SO_0000010

position:27899:1
position: 27899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28930:1
position: 28930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27899-28930:1:exon

LB003_RS16135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16135
old locus tag: LB003_16130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003679562.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MQEQNTTVRKKGQHLTSFERGRIATLHSQGYSNRAIARALNVCHQTINNELCRGEIDQVKKVNGQRQYYAVYSPETAQAKYEANRAHCHRPLKLVGVADFIDYFTTHLRQDGWSPDAAVGRAKLEGLYQPEEMVSTKTLYHYIDAQLLEVRNLDLLEKTRHRAKHHHSIKHKRLAGRSIDERPKSIDQRQEFGHFELDTVVGKRNGQESVILTLIERQSRCQILRLIDGRDADSVNYELAKICQEYGSIMKSVTADNGAEFSEVGAVLTGVADLYYAHPYRSSERGTNEAHNRMIRRDVPKGLSMDILGPHDIQAVESKLNNLPRRQTGYQTPKELFSAASAG
SIO_010081: LB003_RS16135
subclass of: SO_0000673
so part of: LB003_RS16135
location: 27899..28930
location: region:27899-28930:1
so has part: feature:27899-28930:1:exon

WP_004270929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27899-28930:1:exon

LB003_RS16140
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16140
old locus tag: LB003_16135
so part of: sequence
location: 29092..30402
location: region:29092-30402:1
so has part: feature:29092-30402:1:exon
subclass of: SO_0000010

position:29092:1
position: 29092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30402:1
position: 30402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29092-30402:1:exon

LB003_RS16140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16140
old locus tag: LB003_16135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015638851.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MATLPEKRVNFNPKLHISHTGGELSTDAGLVLVKELMAQLNFTTLAYQLVHFDDQRHYARYSNVSLLEQVVLQLIAGYPADLAATNLRNDPTFKLLLAQPQLASQPSLSRFWQRCDEQTITSLQTLNQALLDQAWTGAKQQQLILDIDSTHADTHGHQEKTAFNAHYGTTGYHPLVAFDGQTGHCLKAQLRPGNVYTSTDIAPFITPLLQHYHQVKPNADILVRGDSGFATPELYETCEANDTFYLIRLKANRRLNQLAERFVQISDEQNWTETEVHYYRASYQARSWPKPRQIYIKSTRPAGELLFQHEYLVSNLTSFVAEDAFQAYHQRGQMENYIKEAKAGFYLDKMTSSQFIPNYARMMLSVLAYNLVSLMRQLLPVQHQRLQVTTLRLWLFKVAGKLVTSGRQLYLKLSRHHVYQDLFYQLLARIQALQWG
SIO_010081: LB003_RS16140
subclass of: SO_0000673
so part of: LB003_RS16140
location: 29092..30402
location: region:29092-30402:1
so has part: feature:29092-30402:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29092-30402:1:exon

LB003_RS16145
type: Gene
subclass of: SO_0000704
RO_0002162: 1607
locus tag: LB003_RS16145
old locus tag: LB003_16140
so part of: sequence
location: 30667..31314
location: region:30667-31314:1
so has part: feature:30667-31314:1:exon
subclass of: SO_0000010

position:30667:1
position: 30667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31314:1
position: 31314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30667-31314:1:exon

LB003_RS16145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1607
locus tag: LB003_RS16145
old locus tag: LB003_16140
inference: COORDINATES: protein motif:HMM:NF012948.2
GO component: GO:0009986 - cell surface [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPXTG cell wall anchor domain-containing protein
translation: MKADNQIINYPIITVPNNQTDYHQSNPVIDLNGSSNLLLLVPYKSDSQHPESGTYDPNGKVIAWHNLKDKGTLISSWKDQAMHINPTVYLLTNNYLTLENDQIRIPHWQEGDFDYSYSGTINQPYQKATQPTQPTQPIQPTQPIQPTQPTQLIKTNISKGTPVSLVNNKKNQSKNREVLPQTGEQKESSISVLGVLLLALGSLTSWLTFRKKRED
SIO_010081: LB003_RS16145
subclass of: SO_0000673
so part of: LB003_RS16145
location: 30667..31314
location: region:30667-31314:1
so has part: feature:30667-31314:1:exon

WP_057904126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30667-31314:1:exon