Puntius tetrazona mitochondrion, complete genome.
type: Entry
definition: Puntius tetrazona mitochondrion, complete genome.
sequence version: NC_010110.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_010110.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Puntigrus tetrazona (Sumatra barb)
organism: Puntigrus tetrazona
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Smiliogastrinae; Puntigrus.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from EU287909.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16550
topology: circular
so has quality: SO_0000988
location: 1..16550
location: region:1-16550:1
RO_0002162: 1606681

NC_010110
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Mitochondrial phylogenomics of fishes
author: Nguyen, J.V.
author: Reneau, P.C.
author: Broughton, R.E.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (05-DEC-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Nguyen, J.V.
author: Reneau, P.C.
author: Broughton, R.E.
journal: Submitted (19-NOV-2007) Oklahoma Biological Survey, University of Oklahoma, 111 E Chesapeake St, Norman, OK 73019, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16550:1
position: 16550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16550:1:source
so part of: sequence
organism: Puntigrus tetrazona
organelle: mitochondrion
mol type: genomic DNA

1606681
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Phe
so part of: sequence
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:region

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1606681
product: s-rRNA
so part of: sequence
location: 70..1028
location: region:70-1028:1
so has part: feature:70-1028:1:region

position:70:1
position: 70
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028:1
position: 1028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70-1028:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Val
so part of: sequence
location: 1029..1100
location: region:1029-1100:1
so has part: feature:1029-1100:1:region

position:1029:1
position: 1029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100:1
position: 1100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029-1100:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 1606681
product: l-rRNA
so part of: sequence
location: 1101..2799
location: region:1101-2799:1
so has part: feature:1101-2799:1:region

position:1101:1
position: 1101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2799:1
position: 2799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101-2799:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2798..2874
location: region:2798-2874:1
so has part: feature:2798-2874:1:region

position:2798:1
position: 2798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2874:1
position: 2874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2798-2874:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: ND1
so part of: sequence
location: 2875..3837
location: region:2875-3837:1
so has part: feature:2875-3837:1:exon
subclass of: SO_0000010

5787383
type: Gene
SIO_000068: ncbigene

position:2875:1
position: 2875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3837:1
position: 3837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2875-3837:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MLIMLISSLAYIAPILLAVAFLTLVERKMLGYLQKRKGPCTVGTFGLLQPIADGVKLFVKEPIRPSMASPILFLAAPTLALTLALILWTPIPMPHPLINLNLGILFIMALSSLAVYSILGAGWASNSKYALIGAMRAVAQTISYEVSLGLILISVAILSGGYNLLTLSNTQEKIWLLFPIWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFTLLFLAEYSNILLMNTLSAVLFLGASHNPNIPELTTVNLMTKASLLSLVFLWVRTTYPRFRYDQLMHLMWKNFLPLTLALVLWHAALPIATAGLPPQL
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2875..3837
location: region:2875-3837:1
so has part: feature:2875-3837:1:exon

YP_001595572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2875-3837:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Ile
so part of: sequence
location: 3842..3913
location: region:3842-3913:1
so has part: feature:3842-3913:1:region

position:3842:1
position: 3842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3913:1
position: 3913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3842-3913:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Gln
so part of: sequence
location: complement(3913..3983)
location: region:3913-3983:-1
so has part: feature:3913-3983:-1:region

position:3913:-1
position: 3913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3983:-1
position: 3983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3913-3983:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Met
so part of: sequence
location: 3985..4053
location: region:3985-4053:1
so has part: feature:3985-4053:1:region

position:3985:1
position: 3985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4053:1
position: 4053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3985-4053:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: ND2
so part of: sequence
location: 4054..5098
location: region:4054-5098:1
so has part: feature:4054-5098:1:exon
subclass of: SO_0000010

5787387
type: Gene
SIO_000068: ncbigene

position:4054:1
position: 4054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5098:1
position: 5098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4054-5098:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5098,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYVLSTFMFSLGLGTFMTFISSNWILAWMGLEINTLAIIPLMAQPHHPRAVESATKYFMTQAAGAAIIMFSSLTNAWTTGVWDINSLTNPIASTMFMMALALKIGLAPTHFWLPEVLQGLDLTTGLILSTWQKLAPFALLIQTAHNIDPLLLTFLGAVSTMVGGWGGLNQTQLRKIMAYSSIAHMGWMIVIIQFSPKIALISLTIYIILTSAMFMIFKTLMIKKLDSMSIIWSNNPILASMAALVLLSLAGLPPLTGFMPKWLILQEMAKQEMLIIATIMALATLISLFFYLRLCYVIMLTIKPDVSNKPSVWRCKQTKMPLPVLLMITMAMLLLPTTPTVLILFT
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4054..5098
location: region:4054-5098:1
so has part: feature:4054-5098:1:exon

YP_001595573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4054-5098:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Trp
so part of: sequence
location: 5099..5170
location: region:5099-5170:1
so has part: feature:5099-5170:1:region

position:5099:1
position: 5099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5170:1
position: 5170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5099-5170:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Ala
so part of: sequence
location: complement(5172..5240)
location: region:5172-5240:-1
so has part: feature:5172-5240:-1:region

position:5172:-1
position: 5172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5240:-1
position: 5240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5172-5240:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Asn
so part of: sequence
location: complement(5242..5314)
location: region:5242-5314:-1
so has part: feature:5242-5314:-1:region

position:5242:-1
position: 5242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5314:-1
position: 5314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5242-5314:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Cys
so part of: sequence
location: complement(5348..5414)
location: region:5348-5414:-1
so has part: feature:5348-5414:-1:region

position:5348:-1
position: 5348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5414:-1
position: 5414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5348-5414:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Tyr
so part of: sequence
location: complement(5416..5484)
location: region:5416-5484:-1
so has part: feature:5416-5484:-1:region

position:5416:-1
position: 5416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5484:-1
position: 5484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5416-5484:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: COX1
so part of: sequence
location: 5486..7036
location: region:5486-7036:1
so has part: feature:5486-7036:1:exon
subclass of: SO_0000010

5787386
type: Gene
SIO_000068: ncbigene

position:5486:1
position: 5486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7036:1
position: 7036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5486-7036:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MAITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPALSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAAFVHWFPLLSGYSLHSTWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYALWNTVSSIGSLISLVAVIMFLFILWEAFAAKREVSSVELTTTNVEWLNGCPPPYHTYEEPAFVQIQSN
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5486..7036
location: region:5486-7036:1
so has part: feature:5486-7036:1:exon

YP_001595574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5486-7036:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(7037..7107)
location: region:7037-7107:-1
so has part: feature:7037-7107:-1:region

position:7037:-1
position: 7037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7107:-1
position: 7107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7037-7107:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Asp
so part of: sequence
location: 7109..7181
location: region:7109-7181:1
so has part: feature:7109-7181:1:region

position:7109:1
position: 7109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7181:1
position: 7181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7109-7181:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: COX2
so part of: sequence
location: 7187..7877
location: region:7187-7877:1
so has part: feature:7187-7877:1:exon
subclass of: SO_0000010

5787378
type: Gene
SIO_000068: ncbigene

position:7187:1
position: 7187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7877:1
position: 7877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7187-7877:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7877,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPSQLGFQDAASPVMEELLHFHDHALMIVFLISTLVLYIIVAMVSTKLTNKYILDSQEIEIVWTILPAVILILIALPSLRILYLMDEINDPHLTIKAIGHQWYWSYEYTDYKNLGFDSYMVPTQYLTPGQFRLLETDTRMVIPMESPIRVLVTAEDVLHSWAVPALGVKMDAVPGRLNQTAFISSRPGVFYGQCSEICGANHSFMPIVVESVPLKNFESWSSLTLHLA
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7187..7877
location: region:7187-7877:1
so has part: feature:7187-7877:1:exon

YP_001595575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7187-7877:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Lys
so part of: sequence
location: 7878..7953
location: region:7878-7953:1
so has part: feature:7878-7953:1:region

position:7878:1
position: 7878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7953:1
position: 7953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7878-7953:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: ATP8
so part of: sequence
location: 7955..8119
location: region:7955-8119:1
so has part: feature:7955-8119:1:exon
subclass of: SO_0000010

5787379
type: Gene
SIO_000068: ncbigene

position:7955:1
position: 7955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8119:1
position: 8119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7955-8119:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLDPGPWFLILTFTWLVFLTIIPTKILNHVSPNEPTPVNAEKHKTETWDWPW
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7955..8119
location: region:7955-8119:1
so has part: feature:7955-8119:1:exon

YP_001595576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7955-8119:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: ATP6
so part of: sequence
location: 8113..8796
location: region:8113-8796:1
so has part: feature:8113-8796:1:exon
subclass of: SO_0000010

5787384
type: Gene
SIO_000068: ncbigene

position:8113:1
position: 8113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8796:1
position: 8796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8113-8796:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MMASFFDQFASPSYLGMPLIAIAISLPWVLYPTPSSRMINNRLITIQGWLINRFTNQLLMPLNMGGHKWALLFTSLMTFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLMPMMPAVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENI
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 8113..8796
location: region:8113-8796:1
so has part: feature:8113-8796:1:exon

YP_001595577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8113-8796:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: COX3
so part of: sequence
location: 8796..9580
location: region:8796-9580:1
so has part: feature:8796-9580:1:exon
subclass of: SO_0000010

5787377
type: Gene
SIO_000068: ncbigene

position:9580:1
position: 9580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8796-9580:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9579..9580,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAYHMVDPSPWPLTGAIAALLMTSGLAIWFHFHSITLMTLGLILLLLTMYQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGITPLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGKRKQAIHSLTLTILLGLYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQIRYHFTSEHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8796..9580
location: region:8796-9580:1
so has part: feature:8796-9580:1:exon

YP_001595578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8796-9580:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Gly
so part of: sequence
location: 9581..9652
location: region:9581-9652:1
so has part: feature:9581-9652:1:region

position:9581:1
position: 9581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9652:1
position: 9652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9581-9652:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: ND3
so part of: sequence
location: 9653..9998
location: region:9653-9998:1
so has part: feature:9653-9998:1:exon
subclass of: SO_0000010

5787381
type: Gene
SIO_000068: ncbigene

position:9653:1
position: 9653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9998:1
position: 9998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9653-9998:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9998,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLITIMMIMTALSSILMIVAFWMPLMNPDSEKLSPYECGFDPLGSARLPFSLHFFLVAILFILFDLEIALLLPLPWGNHLHDPTNTFFWAASVLVLLILGLIYEWTQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9653..9998
location: region:9653-9998:1
so has part: feature:9653-9998:1:exon

YP_001595579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9653-9998:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Arg
so part of: sequence
location: 9999..10068
location: region:9999-10068:1
so has part: feature:9999-10068:1:region

position:9999:1
position: 9999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10068:1
position: 10068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9999-10068:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: ND4L
so part of: sequence
location: 10069..10365
location: region:10069-10365:1
so has part: feature:10069-10365:1:exon
subclass of: SO_0000010

5787382
type: Gene
SIO_000068: ncbigene

position:10069:1
position: 10069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10365:1
position: 10365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10069-10365:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPVHFSFSSAFILGLLGLAFHRTHLLSALLCLEGMMLSLFLALALWALQLQITSFSVAPVMLLALSACEASIGLALMVATARTHGTDQLQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 10069..10365
location: region:10069-10365:1
so has part: feature:10069-10365:1:exon

YP_001595580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10069-10365:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: ND4
so part of: sequence
location: 10359..11739
location: region:10359-11739:1
so has part: feature:10359-11739:1:exon
subclass of: SO_0000010

5787376
type: Gene
SIO_000068: ncbigene

position:10359:1
position: 10359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11739:1
position: 11739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10359-11739:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11739,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILAPTIMLFPTIWLTPRKWLWTTTTAQSLFIAFISLTWLKWTSEAGWTCSNPYLATDPLSTPLLVLTCWLLPLMILASQNHMNPEPINRQRSYITLLALLQTFLIMAFGATEILMFYIMFEATLIPTLIIITRWGNQVERLNAGTYFLFYTLAGSLPLLIALLTLQTTSGTLSMLILQYPESSQLDSWGNTLWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRVMVMLNPPPQELTYPFIILALWGIIMTGSICLRQTDLKLLIAYSSVSHMGLVAAGILTQTSWGFSGAIILMIAHGLVSSALFCLANSAYERTHSRTMMLARGLQAIFPLAATWWFIANLANLALPPLPNLMGELMIIVTMFNWSPWTILLTGLGTLITAGYSLYMFLMSQRGQTPNHIMGLQPYHTREHLLMVLHLAPVILMVVKPELMLGWCY
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10359..11739
location: region:10359-11739:1
so has part: feature:10359-11739:1:exon

YP_001595581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10359-11739:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-His
so part of: sequence
location: 11740..11808
location: region:11740-11808:1
so has part: feature:11740-11808:1:region

position:11740:1
position: 11740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11808:1
position: 11808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11740-11808:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 11810..11877
location: region:11810-11877:1
so has part: feature:11810-11877:1:region

position:11810:1
position: 11810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11877:1
position: 11877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11810-11877:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 11879..11951
location: region:11879-11951:1
so has part: feature:11879-11951:1:region

position:11879:1
position: 11879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11951:1
position: 11951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11879-11951:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: ND5
so part of: sequence
location: 11952..13772
location: region:11952-13772:1
so has part: feature:11952-13772:1:exon
subclass of: SO_0000010

5787375
type: Gene
SIO_000068: ncbigene

position:11952:1
position: 11952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13772:1
position: 13772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11952-13772:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MTMIMYSSLMLVLLTLVYPLLKTLYPNQKLELSKMTKTAVSSAFYISLLPLMIYLNLKTEGIIMNWQWMQIQTLNMDISLKFDFYSLIFVPLALFITWSILEFALWYMHSDPNINQFFKFLLMFLLAMITLVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAAIQAMMYNRVGDIGLILTMSWFAMNLNSWEIQQVFMASENIDMTLPMLGVVLAAMGKSAQFGLHPWLLSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNQLTLTTCLCLGALTSLFTATCALTQNDIKKIVALSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNGEQDIRKMGGLFHTMPTTATYFTISSLALMGTPFLAGFFSKDAIIEALNTSHLNAWALVMTLIATSFTAVYSFRLIYFVTMGTPRLLPMTPINENDPLVINSIKRLAWGSIVAGFIITQNFPPTKTPIMTMPILMKTAAIIVTILGLMMAFKLADMTNKQVKVIPVIKTHHFSNLLGFFPTMIHRILPKLKLTLGQTTATQLDKTWLETAGPKSLSLMQMSMSKIMNDMAQGMIKTYLAIFALTLMLAIILMIL
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11952..13772
location: region:11952-13772:1
so has part: feature:11952-13772:1:exon

YP_001595582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11952-13772:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: ND6
so part of: sequence
location: complement(13769..14290)
location: region:13769-14290:-1
so has part: feature:13769-14290:-1:exon
subclass of: SO_0000010

5787385
type: Gene
SIO_000068: ncbigene

position:13769:-1
position: 13769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14290:-1
position: 14290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13769-14290:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTYTMSMLLVALIIGLIAVASNPSPYFGAFGLVMVAGVGCGVLACHGGSFLSLVLFLIYLGGMLVVFAYSAALAADPFPEAWGSRPVLIYVFIYLSGVGLMALFFCGGWYEGSWVIVDGWGEFSALCGDLGGVAVMYSFGGGMLVICAWALLLALFAVLELIRGLSHGAIRAV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13769..14290)
location: region:13769-14290:-1
so has part: feature:13769-14290:-1:exon

YP_001595583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13769-14290:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Glu
so part of: sequence
location: complement(14291..14359)
location: region:14291-14359:-1
so has part: feature:14291-14359:-1:region

position:14291:-1
position: 14291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14359:-1
position: 14359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14291-14359:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 1606681
gene: CYTB
so part of: sequence
location: 14366..15502
location: region:14366-15502:1
so has part: feature:14366-15502:1:exon
subclass of: SO_0000010

5787380
type: Gene
SIO_000068: ncbigene

position:14366:1
position: 14366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15502:1
position: 15502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14366-15502:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1606681
gene: CYTB
codon start: 1
transl table: 2
product: cytochrome b
translation: MASLRKTHPLIKIVNEALIDLPTPSSISSWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVTHICRDVNFGWLIRNIHANGASFFFICIYMHIARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNMLVQWIWGGFSVDNATLTRFFAFHFLLPFIIAAMTILHLLFLHETGSNNPIGLNSNADKIPFHPYFTYKDLLGFVILITALALLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPMLHTSKQRGMTFRPLTQLLFWTLVADMAILTWIGGMPVEHPFIIIGQIASVLYFALFLILIPLAGWWENKTLG
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14366..15502
location: region:14366-15502:1
so has part: feature:14366-15502:1:exon

YP_001595584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14366-15502:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Thr
so part of: sequence
location: 15506..15575
location: region:15506-15575:1
so has part: feature:15506-15575:1:region

position:15506:1
position: 15506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15575:1
position: 15575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15506-15575:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1606681
product: tRNA-Pro
so part of: sequence
location: complement(15575..15645)
location: region:15575-15645:-1
so has part: feature:15575-15645:-1:region

position:15575:-1
position: 15575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15645:-1
position: 15645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15575-15645:-1:region