Lentilactobacillus hilgardii strain FLUB plasmid unnamed3.
type: Entry
definition: Lentilactobacillus hilgardii strain FLUB plasmid unnamed3.
sequence version: NZ_CP047124.1
sequence date: 2022-12-29
sequence: sequence
division: CON
label: NZ_CP047124.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN13567894
keyword: RefSeq
source: Lentilactobacillus hilgardii
organism: Lentilactobacillus hilgardii
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lentilactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP047124.1.\nBacteria and source DNA available from Department of Biotechnology,\nMicrobiology and Human Nutrition, University of Life Sciences in\nLublin.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. v3.0; SPAdes v. v3.11.1\nAssembly Name :: FLUB\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 100.0x\nSequencing Technology :: Illumina; Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/24/2022 02:12:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,049\nCDSs (total) :: 2,970\nGenes (coding) :: 2,935\nCDSs (with protein) :: 2,935\nGenes (RNA) :: 79\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 61\nncRNAs :: 3\nPseudo Genes (total) :: 35\nCDSs (without protein) :: 35\nPseudo Genes (ambiguous residues) :: 0 of 35\nPseudo Genes (frameshifted) :: 17 of 35\nPseudo Genes (incomplete) :: 22 of 35\nPseudo Genes (internal stop) :: 6 of 35\nPseudo Genes (multiple problems) :: 8 of 35\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 28299
topology: linear
so has quality: SO_0000987
location: 1..28299
location: region:1-28299:1
RO_0002162: 1588

NZ_CP047124
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN13567894
type: BioSample
SIO_000068: biosample

1
title: Lactobacillus hilgardii FLUB
author: Gustaw, K.
journal: Unpublished

2
title: Direct Submission
author: Gustaw, K.
journal: Submitted (16-DEC-2019) Department of Biotechnology, Microbiology and Human Nutrition, University of Life Sciences in Lublin, Akademicka 13, Lublin 20-950, Poland

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28299:1
position: 28299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-28299:1:source
so part of: sequence
organism: Lentilactobacillus hilgardii
mol type: genomic DNA
strain: FLUB
isolation source: mead
plasmid: unnamed3
country: Poland: Lublin
collection date: 2018-10-10

1588
type: Taxonomy
SIO_000068: taxonomy

GQR93_RS14995
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS14995
old locus tag: GQR93_14995
so part of: sequence
location: complement(157..972)
location: region:157-972:-1
so has part: feature:157-972:-1:exon
subclass of: SO_0000010

69059674
type: Gene
SIO_000068: ncbigene

position:157:-1
position: 157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972:-1
position: 972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157-972:-1:exon

GQR93_RS14995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS14995
old locus tag: GQR93_14995
inference: COORDINATES: protein motif:HMM:NF019096.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUMOD1 domain-containing DNA-binding protein
translation: MEPIVYKGKRFISYQQAANFLGMTATGFSKRYQKYQSGQFSLAELFNSVGKKTQLQKHKSLTYHGETFINYQEAAKSAGVSQTTFYRRLKKYYADQITLDELFSSVKYQSYELPPYHKKVFENKLMAAKYVGITPTKFTERLKRYHQGIYDIDDLYSRNSTNLRAKQLNTIKLHYQGITFNSYKAAYDYIGISSAAFNGRLKKYLNGEFTIEQLFRSPKHSQGHMIKYHRRTFYSYKEAAQYIGISYNAFNKRLKKYKSNAITLDELFAKT
SIO_010081: GQR93_RS14995
subclass of: SO_0000673
so part of: GQR93_RS14995
location: complement(157..972)
location: region:157-972:-1
so has part: feature:157-972:-1:exon

WP_159298860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157-972:-1:exon

GQR93_RS15000
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15000
old locus tag: GQR93_15000
so part of: sequence
location: complement(999..1649)
location: region:999-1649:-1
so has part: feature:999-1649:-1:exon
subclass of: SO_0000010

69059675
type: Gene
SIO_000068: ncbigene

position:999:-1
position: 999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1649:-1
position: 1649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999-1649:-1:exon

GQR93_RS15000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15000
old locus tag: GQR93_15000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003553325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUMOD1 domain-containing DNA-binding protein
translation: MKPIQYKDKTFTSYQQAADFIGITKTGFAKRYRKYEAGEYDLNDLFYDGNYHLTHLIYYKNQKFSSHAEAAKFIGITSVSFNRRYKKYLRSEISLENLFKKPKYTIYPMPDWHGKIFNSKKEAASYLGISQNTFTQRLRRYYNGDYTLDDIFASDPLELQKKHSKTMAITYNGHTFETQREACQYLGISQSAFSARYHKYLSGELPIDELFRRQKH
SIO_010081: GQR93_RS15000
subclass of: SO_0000673
so part of: GQR93_RS15000
location: complement(999..1649)
location: region:999-1649:-1
so has part: feature:999-1649:-1:exon

WP_159298861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:999-1649:-1:exon

GQR93_RS15005
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15005
old locus tag: GQR93_15005
so part of: sequence
location: complement(1900..2424)
location: region:1900-2424:-1
so has part: feature:1900-2424:-1:exon
subclass of: SO_0000010

69059676
type: Gene
SIO_000068: ncbigene

position:1900:-1
position: 1900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2424:-1
position: 2424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1900-2424:-1:exon

GQR93_RS15005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15005
old locus tag: GQR93_15005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRQAESSKRMINRYQIYRQEKLIGTVMAFPDYVNQIFYLVFNEDDHSFRIKNEDIFIDFQGDKYYITNVERIHYSYHLKFETNSDHNRCQKPQSWINTLAIKTFSFKDIESLLSIVQLEDREQLVSLIAVLKRITIEHKSLKQHDLFQFKDLLDKYNVVEAKLAEFLLNHLVN
SIO_010081: GQR93_RS15005
subclass of: SO_0000673
so part of: GQR93_RS15005
location: complement(1900..2424)
location: region:1900-2424:-1
so has part: feature:1900-2424:-1:exon

WP_159298862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1900-2424:-1:exon

GQR93_RS15010
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15010
old locus tag: GQR93_15010
so part of: sequence
location: complement(2656..2871)
location: region:2656-2871:-1
so has part: feature:2656-2871:-1:exon
subclass of: SO_0000010

69059677
type: Gene
SIO_000068: ncbigene

position:2656:-1
position: 2656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2871:-1
position: 2871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2656-2871:-1:exon

GQR93_RS15010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15010
old locus tag: GQR93_15010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003649837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEDFLNKVSKKASEQLGNLKSPYQFETEKTKTVQVRMSTYKKIKRIAFENDEKIVDVLEKLIHEGLSQRK
SIO_010081: GQR93_RS15010
subclass of: SO_0000673
so part of: GQR93_RS15010
location: complement(2656..2871)
location: region:2656-2871:-1
so has part: feature:2656-2871:-1:exon

WP_159298863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2656-2871:-1:exon

GQR93_RS15015
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15015
old locus tag: GQR93_15015
so part of: sequence
location: complement(2878..3663)
location: region:2878-3663:-1
so has part: feature:2878-3663:-1:exon
subclass of: SO_0000010

69059678
type: Gene
SIO_000068: ncbigene

position:2878:-1
position: 2878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3663:-1
position: 3663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2878-3663:-1:exon

GQR93_RS15015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15015
old locus tag: GQR93_15015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003553337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MNGKTLLNFNFKGGVGKTTLTVMETYLLGQENKKVLLIDFDPQGNATEIMRETYHIILKPKLSLYEGLLRGDLSKSIVSVTDKIDMIPTDWTLSLWIGAVEKVSQTERNILLSRMLLKLKTNYDYIFIDVPPTINVFTNNAIMASDFISIVLQTQKQSYTSSLKTATHLGELREQYDGDFQLVGVILYLMKPRAKVDAEITARAKDFFGEGVFSNSIRTQERVKTFTNEGIRDKDRWDKRAIQMYQMVLNEQLLRIQQLEG
SIO_010081: GQR93_RS15015
subclass of: SO_0000673
so part of: GQR93_RS15015
location: complement(2878..3663)
location: region:2878-3663:-1
so has part: feature:2878-3663:-1:exon

WP_159298864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2878-3663:-1:exon

GQR93_RS15020
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15020
old locus tag: GQR93_15020
so part of: sequence
location: 4063..5058
location: region:4063-5058:1
so has part: feature:4063-5058:1:exon
subclass of: SO_0000010

69059679
type: Gene
SIO_000068: ncbigene

position:4063:1
position: 4063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5058:1
position: 5058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4063-5058:1:exon

GQR93_RS15020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15020
old locus tag: GQR93_15020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016527414.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MNQDNFYKVSEVYAETYYQLPKVLFTNDNYKGLSNDAKVAFALLKDRFNYSVRNHWVDEQDNLYFVYTNQALKEILNCSEPKIIKIKKNLETAHLLYQKRIGINQPNRLYLLKPEVTANDVYRQVSSQSLDNSGTKNSLVPVNSTNTDCQTLDNSGTKNSLVNLYKEHKDIDKSRYNIDTQKLDFSTAQFSPAELEKQNKDLVNHANDFLTDEDSGLPVFLEPEAVQLLSFWCRTPKQMRRFIGIILNAKYRVEKDHQDIGVIIPLDDKELKPLMTKALRRYFNALRSNEKHIKNIENYLYGTMQNLFGIWWNKRANKQWKAKHKPKFTDQ
SIO_010081: GQR93_RS15020
subclass of: SO_0000673
so part of: GQR93_RS15020
location: 4063..5058
location: region:4063-5058:1
so has part: feature:4063-5058:1:exon

WP_159298865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4063-5058:1:exon

GQR93_RS15025
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15025
old locus tag: GQR93_15025
so part of: sequence
location: 5468..6346
location: region:5468-6346:1
so has part: feature:5468-6346:1:exon
subclass of: SO_0000010

69059680
type: Gene
SIO_000068: ncbigene

position:5468:1
position: 5468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6346:1
position: 6346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5468-6346:1:exon

GQR93_RS15025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15025
old locus tag: GQR93_15025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003553343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MMQFFKVKESNLNSDLKGGNEILIYSLLEDRMQASTKNKDFFSKKFNDYYVIYTRDELAMKLGVNVSTITEVFKRLVKKGYLVMKHQFNGATKLFLPKFENETNPEANHDNVKREIQRPEIGKPNSSRTPNSNNKQTIYTRDTYPETNSKKIVAITQKEKQAAKRKKLNELEINALSNSLETKAGFSKRTVNMLKALSFNDPKKLYQLSGMVFKAKNVVKKQARNVRNSQLALSFENNNRYEDMAVDLQRIVMTASRSKRSNVEGYIFSSLVNYFQEAVNDYCCHDVQSVIG
SIO_010081: GQR93_RS15025
subclass of: SO_0000673
so part of: GQR93_RS15025
location: 5468..6346
location: region:5468-6346:1
so has part: feature:5468-6346:1:exon

WP_159298866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5468-6346:1:exon

GQR93_RS15030
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15030
old locus tag: GQR93_15030
so part of: sequence
location: 6864..7229
location: region:6864-7229:1
so has part: feature:6864-7229:1:exon
subclass of: SO_0000010

69059681
type: Gene
SIO_000068: ncbigene

position:6864:1
position: 6864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7229:1
position: 7229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6864-7229:1:exon

GQR93_RS15030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15030
old locus tag: GQR93_15030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003553346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5839 family protein
translation: MNQGHRIETVINGHHVNKNHYFSLKSYQWRVRHHKTVGKKNLAIGQLAWVEVTGQPKPVLVIITGIHTLSEAADRQVARQLKTVKTITTNSVKDLDAITRDNFDQYLAAHPQGDAFYRPKK
SIO_010081: GQR93_RS15030
subclass of: SO_0000673
so part of: GQR93_RS15030
location: 6864..7229
location: region:6864-7229:1
so has part: feature:6864-7229:1:exon

WP_159298867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6864-7229:1:exon

GQR93_RS15495
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15495
so part of: sequence
location: complement(7350..7793)
location: region:7350-7793:-1
so has part: feature:7350-7793:-1:exon
subclass of: SO_0000010

69059764
type: Gene
SIO_000068: ncbigene

position:7350:-1
position: 7350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7793:-1
position: 7793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7350-7793:-1:exon

GQR93_RS15495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15495
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSWQADKPNQEPTSNQNEPLTQQLTQLNQTIAELRNYQGTQIQLQATAKTSLDQQLRQIEQTAQQVNQQFQTTLNNLDSSNASSQAQLKQTLQSAYATFQKADQPDQSGKSNRTQTDSNRARPKQPAPQPTQRPSEPDYPRDAGPNR
SIO_010081: GQR93_RS15495
subclass of: SO_0000673
so part of: GQR93_RS15495
location: complement(7350..7793)
location: region:7350-7793:-1
so has part: feature:7350-7793:-1:exon

WP_225442060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7350-7793:-1:exon

GQR93_RS15500
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15500
so part of: sequence
location: complement(8117..8518)
location: region:8117-8518:-1
so has part: feature:8117-8518:-1:exon
subclass of: SO_0000010

69059765
type: Gene
SIO_000068: ncbigene

position:8117:-1
position: 8117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8518:-1
position: 8518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8117-8518:-1:exon

GQR93_RS15500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15500
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MATTHIKRSTSASRLVNYAEKRAVKQDGLNLDIQYAKSEFKQVRDIYGNPGRTQAYASRIAFSPLEFNPKDPHDQTTVLAVAKEVYAKAYPNQQVALYEHADTDSLHVHAVIGAINLETGQKCTVIGINTVIT
SIO_010081: GQR93_RS15500
subclass of: SO_0000673
so part of: GQR93_RS15500
location: complement(8117..8518)
location: region:8117-8518:-1
so has part: feature:8117-8518:-1:exon

WP_225442061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8117-8518:-1:exon

GQR93_RS15505
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15505
so part of: sequence
location: complement(8500..8703)
location: region:8500-8703:-1
so has part: feature:8500-8703:-1:exon
subclass of: SO_0000010

69059766
type: Gene
SIO_000068: ncbigene

position:8500:-1
position: 8500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8703:-1
position: 8703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8500-8703:-1:exon

GQR93_RS15505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15505
inference: COORDINATES: protein motif:HMM:NF017524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MSKEGPGARLVAPKIAAQDAQNITHQLAKIGGNLNQLAHHANQGGQVNPQALRDLQNEVQHVWQQLI
SIO_010081: GQR93_RS15505
subclass of: SO_0000673
so part of: GQR93_RS15505
location: complement(8500..8703)
location: region:8500-8703:-1
so has part: feature:8500-8703:-1:exon

WP_225442062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8500-8703:-1:exon

GQR93_RS15045
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15045
old locus tag: GQR93_15045
so part of: sequence
location: complement(9280..10066)
location: region:9280-10066:-1
so has part: feature:9280-10066:-1:exon
subclass of: SO_0000010

69059682
type: Gene
SIO_000068: ncbigene

position:9280:-1
position: 9280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10066:-1
position: 10066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9280-10066:-1:exon

GQR93_RS15045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15045
old locus tag: GQR93_15045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKNYPSNITRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVLKKIVIARRTYQGRSALTSFIIVDAQSVKNTATAENKGYDAGKKISGIKCHLAVDINGFPQAIHMTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVLAFLALLLKRF
SIO_010081: GQR93_RS15045
subclass of: SO_0000673
so part of: GQR93_RS15045
location: complement(join(9280..9805,9804..10066))
location: region:9280-10066:-1
so has part: feature:9804-10066:-1:exon
so has part: feature:9280-9805:-1:exon

WP_159298868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9804-10066:-1:exon

position:9804:-1
position: 9804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9280-9805:-1:exon

position:9805:-1
position: 9805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GQR93_RS15510
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15510
pseudo: true
so part of: sequence
location: 11332..13161
location: region:11332-13161:1
so has part: feature:11332-13161:1:exon
subclass of: SO_0000010

69059767
type: Gene
SIO_000068: ncbigene

position:11332:1
position: 11332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13161:1
position: 13161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11332-13161:1:exon

GQR93_RS15510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013728337.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: S-layer protein
SIO_010081: GQR93_RS15510
subclass of: SO_0000673
so part of: GQR93_RS15510
location: 11332..13161
location: region:11332-13161:1
so has part: feature:11332-13161:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11332-13161:1:exon

GQR93_RS15065
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15065
old locus tag: GQR93_15065
so part of: sequence
location: complement(13393..14180)
location: region:13393-14180:-1
so has part: feature:13393-14180:-1:exon
subclass of: SO_0000010

69059684
type: Gene
SIO_000068: ncbigene

position:13393:-1
position: 13393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14180:-1
position: 14180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13393-14180:-1:exon

GQR93_RS15065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15065
old locus tag: GQR93_15065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKNYPSKITRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVFKKIVIARRTYQGRSALTSFIIVDAQSVKNTATAENKGYDAGKKISGIKRHLAVDINGFPQAIHMTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVLAFLALLLKRF
SIO_010081: GQR93_RS15065
subclass of: SO_0000673
so part of: GQR93_RS15065
location: complement(join(13393..13922,13922..14180))
location: region:13393-14180:-1
so has part: feature:13922-14180:-1:exon
so has part: feature:13393-13922:-1:exon

WP_159298870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13922-14180:-1:exon

position:13922:-1
position: 13922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13393-13922:-1:exon

GQR93_RS15070
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15070
old locus tag: GQR93_15070
so part of: sequence
location: complement(14318..14758)
location: region:14318-14758:-1
so has part: feature:14318-14758:-1:exon
subclass of: SO_0000010

69059685
type: Gene
SIO_000068: ncbigene

position:14318:-1
position: 14318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14758:-1
position: 14758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14318-14758:-1:exon

GQR93_RS15070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15070
old locus tag: GQR93_15070
inference: COORDINATES: protein motif:HMM:NF019096.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUMOD1 domain-containing DNA-binding protein
translation: MAAKYVGITPTKFTERLKRYHQGIYDIDDLYSRNSTNLRAKQLNTIKLHYQGITFNSYKAAYDYIGISSAAFNGRLKKYLNGEFTIEQLFRSPKHSQGHMIKYHRRTFYSYKEAAQYIGISYNAFNKRLKKYKSNAITLDELFAKT
SIO_010081: GQR93_RS15070
subclass of: SO_0000673
so part of: GQR93_RS15070
location: complement(14318..14758)
location: region:14318-14758:-1
so has part: feature:14318-14758:-1:exon

WP_159298871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14318-14758:-1:exon

GQR93_RS15075
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15075
old locus tag: GQR93_15075
so part of: sequence
location: complement(14957..15133)
location: region:14957-15133:-1
so has part: feature:14957-15133:-1:exon
subclass of: SO_0000010

69059686
type: Gene
SIO_000068: ncbigene

position:14957:-1
position: 14957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15133:-1
position: 15133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14957-15133:-1:exon

GQR93_RS15075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15075
old locus tag: GQR93_15075
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEPIVYKGKRFISYQQAANFLGMTATGFSKRYQKYQSGQFSLAELFNSVGKKNTITET
SIO_010081: GQR93_RS15075
subclass of: SO_0000673
so part of: GQR93_RS15075
location: complement(14957..15133)
location: region:14957-15133:-1
so has part: feature:14957-15133:-1:exon

WP_159298872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14957-15133:-1:exon

GQR93_RS15520
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15520
so part of: sequence
location: complement(15649..15807)
location: region:15649-15807:-1
so has part: feature:15649-15807:-1:exon
subclass of: SO_0000010

69059769
type: Gene
SIO_000068: ncbigene

position:15649:-1
position: 15649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15807:-1
position: 15807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15649-15807:-1:exon

GQR93_RS15520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPIQYKDKTFTSYQQAADFIGITKTGFAKRYRKYEAGEYDLNDLFMMVIII
SIO_010081: GQR93_RS15520
subclass of: SO_0000673
so part of: GQR93_RS15520
location: complement(15649..15807)
location: region:15649-15807:-1
so has part: feature:15649-15807:-1:exon

WP_225442064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15649-15807:-1:exon

GQR93_RS15085
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15085
old locus tag: GQR93_15085
so part of: sequence
location: complement(16057..16284)
location: region:16057-16284:-1
so has part: feature:16057-16284:-1:exon
subclass of: SO_0000010

69059687
type: Gene
SIO_000068: ncbigene

position:16057:-1
position: 16057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16284:-1
position: 16284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16057-16284:-1:exon

GQR93_RS15085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15085
old locus tag: GQR93_15085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIKTFSFKDIESLLSIVQLEDREQLVSLIAVLKRITIEHKSLKQHDLFQFKDLLDKYNVVEAKLAEFLLNHLVN
SIO_010081: GQR93_RS15085
subclass of: SO_0000673
so part of: GQR93_RS15085
location: complement(16057..16284)
location: region:16057-16284:-1
so has part: feature:16057-16284:-1:exon

WP_159298873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16057-16284:-1:exon

GQR93_RS15095
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15095
old locus tag: GQR93_15095
so part of: sequence
location: complement(17031..17561)
location: region:17031-17561:-1
so has part: feature:17031-17561:-1:exon
subclass of: SO_0000010

69059688
type: Gene
SIO_000068: ncbigene

position:17031:-1
position: 17031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17561:-1
position: 17561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17031-17561:-1:exon

GQR93_RS15095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15095
old locus tag: GQR93_15095
inference: COORDINATES: protein motif:HMM:NF025001.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIPTDWTLSLWIGAVEKVSQTERNILLSRMLLKLKTNYDYIFIDVPPTINVFTNNAIMASDFISIVLQTQKQSYTSSLKTATHLGELREQYDGDFQLVGVILYLMKPRAKVDAEITARAKDFFGEGVFSNSIRTQERVKTFTNEGIRDKDRWDKRAIQMYQMVLNEQLLRIQQLEG
SIO_010081: GQR93_RS15095
subclass of: SO_0000673
so part of: GQR93_RS15095
location: complement(17031..17561)
location: region:17031-17561:-1
so has part: feature:17031-17561:-1:exon

WP_263863849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17031-17561:-1:exon

GQR93_RS15100
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15100
old locus tag: GQR93_15100
pseudo: true
so part of: sequence
location: 18212..19206
location: region:18212-19206:1
so has part: feature:18212-19206:1:exon
subclass of: SO_0000010

69059689
type: Gene
SIO_000068: ncbigene

position:18212:1
position: 18212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19206:1
position: 19206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18212-19206:1:exon

GQR93_RS15100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15100
old locus tag: GQR93_15100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016526802.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: replication initiator protein A
SIO_010081: GQR93_RS15100
subclass of: SO_0000673
so part of: GQR93_RS15100
location: 18212..19206
location: region:18212-19206:1
so has part: feature:18212-19206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18212-19206:1:exon

GQR93_RS15525
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15525
so part of: sequence
location: 19705..20121
location: region:19705-20121:1
so has part: feature:19705-20121:1:exon
subclass of: SO_0000010

69059770
type: Gene
SIO_000068: ncbigene

position:19705:1
position: 19705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20121:1
position: 20121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19705-20121:1:exon

GQR93_RS15525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQASTKNKDFFSKKFNDYYVIYTRDELAMKLGVNVSTITEVFKRLVKKGYLVMKHQFNGATKLFLPKFENETNPEANHDNVKRKSNVLKLENPILVEHLIQIINKQYIQEIPIQRLILKKLSLSLKKKNRQPNEKKIK
SIO_010081: GQR93_RS15525
subclass of: SO_0000673
so part of: GQR93_RS15525
location: 19705..20121
location: region:19705-20121:1
so has part: feature:19705-20121:1:exon

WP_225442065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19705-20121:1:exon

GQR93_RS15110
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15110
old locus tag: GQR93_15110
so part of: sequence
location: 21008..21400
location: region:21008-21400:1
so has part: feature:21008-21400:1:exon
subclass of: SO_0000010

69059690
type: Gene
SIO_000068: ncbigene

position:21008:1
position: 21008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21400:1
position: 21400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21008-21400:1:exon

GQR93_RS15110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15110
old locus tag: GQR93_15110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003553346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5839 family protein
translation: MNQGHRIETVINGHHVNKNHYFSLKSYQWRVRHHKTVGKKNLAIGQLAWVEVTGQPKPVLVIITGIHTLSEAADRQVARQLKTVKTITTNSVKDLDAITRDNFDQYLAAHPQGDAFYRPKNELTTQNESR
SIO_010081: GQR93_RS15110
subclass of: SO_0000673
so part of: GQR93_RS15110
location: 21008..21400
location: region:21008-21400:1
so has part: feature:21008-21400:1:exon

WP_159298874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21008-21400:1:exon

GQR93_RS15605
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15605
so part of: sequence
location: complement(21619..22296)
location: region:21619-22296:-1
so has part: feature:21619-22296:-1:exon
subclass of: SO_0000010

77249795
type: Gene
SIO_000068: ncbigene

position:21619:-1
position: 21619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22296:-1
position: 22296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21619-22296:-1:exon

GQR93_RS15605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15605
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MHGNWHQYRDHLVHITDQVCQEHSLMVTQPDPNRHEKRSMAEIKLRAKQQPTWKDQIRQAVDHTMQNPLICDFQAFQADLKQQAVKVWERGKNLTYQLLGTNYKSRGTKLGIDYEKETIFNELASRQTQSRTNQQPERTVNPTIDPAQSDHSRTPELPGHSDSTASHSQNISRSTTATNRTNRSTGQSTISDDLKQLRQQQRQLASPIKTDLTKRLRNVSKSRPT
SIO_010081: GQR93_RS15605
subclass of: SO_0000673
so part of: GQR93_RS15605
location: complement(21619..22296)
location: region:21619-22296:-1
so has part: feature:21619-22296:-1:exon

WP_263863850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21619-22296:-1:exon

GQR93_RS15610
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15610
so part of: sequence
location: complement(22260..22523)
location: region:22260-22523:-1
so has part: feature:22260-22523:-1:exon
subclass of: SO_0000010

77249796
type: Gene
SIO_000068: ncbigene

position:22260:-1
position: 22260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22523:-1
position: 22523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22260-22523:-1:exon

GQR93_RS15610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15610
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MAILVEPKRMPAGLPFSPLEFNPKDPHDQTTVLAVAKEVYAKAYPNQQVALYEHADTDSLHVHAVIGAINLETGQKCTVIGINTVIT
SIO_010081: GQR93_RS15610
subclass of: SO_0000673
so part of: GQR93_RS15610
location: complement(22260..22523)
location: region:22260-22523:-1
so has part: feature:22260-22523:-1:exon

WP_263863851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22260-22523:-1:exon

GQR93_RS15615
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15615
so part of: sequence
location: complement(22474..22662)
location: region:22474-22662:-1
so has part: feature:22474-22662:-1:exon
subclass of: SO_0000010

77249797
type: Gene
SIO_000068: ncbigene

position:22474:-1
position: 22474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22662:-1
position: 22662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22474-22662:-1:exon

GQR93_RS15615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15615
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MATTHIKRSTSASRLVNYAEKRAVKQDGLNLDIQYAKSEFKQVRDIYGNPGRTQAYASRIAF
SIO_010081: GQR93_RS15615
subclass of: SO_0000673
so part of: GQR93_RS15615
location: complement(22474..22662)
location: region:22474-22662:-1
so has part: feature:22474-22662:-1:exon

WP_263863852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22474-22662:-1:exon

GQR93_RS15530
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15530
so part of: sequence
location: complement(22644..22739)
location: region:22644-22739:-1
so has part: feature:22644-22739:-1:exon
subclass of: SO_0000010

69059771
type: Gene
SIO_000068: ncbigene

position:22644:-1
position: 22644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22739:-1
position: 22739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22644-22739:-1:exon

GQR93_RS15530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15530
inference: COORDINATES: protein motif:HMM:NF017524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAHHANQGGQVNPQALRDLQNEVQHVWQQLI
SIO_010081: GQR93_RS15530
subclass of: SO_0000673
so part of: GQR93_RS15530
location: complement(22644..22739)
location: region:22644-22739:-1
so has part: feature:22644-22739:-1:exon

WP_263863853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22644-22739:-1:exon

GQR93_RS15125
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15125
old locus tag: GQR93_15125
so part of: sequence
location: complement(23424..24210)
location: region:23424-24210:-1
so has part: feature:23424-24210:-1:exon
subclass of: SO_0000010

69059692
type: Gene
SIO_000068: ncbigene

position:23424:-1
position: 23424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24210:-1
position: 24210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23424-24210:-1:exon

GQR93_RS15125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15125
old locus tag: GQR93_15125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKNYPSNITRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVLKKIVIARRTYQGRSALTSFIIVDAQSVKNTATAENKGYDAGKKISGIKCHLAVDINGFPQAIHMTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVLAFLALLLKRF
SIO_010081: GQR93_RS15125
subclass of: SO_0000673
so part of: GQR93_RS15125
location: complement(join(23424..23949,23948..24210))
location: region:23424-24210:-1
so has part: feature:23948-24210:-1:exon
so has part: feature:23424-23949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23948-24210:-1:exon

position:23948:-1
position: 23948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23424-23949:-1:exon

position:23949:-1
position: 23949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GQR93_RS15135
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15135
old locus tag: GQR93_15135
pseudo: true
so part of: sequence
location: 25473..27268
location: region:25473-27268:1
so has part: feature:25473-27268:1:exon
subclass of: SO_0000010

69059694
type: Gene
SIO_000068: ncbigene

position:25473:1
position: 25473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27268:1
position: 27268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25473-27268:1:exon

GQR93_RS15135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15135
old locus tag: GQR93_15135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013728337.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: S-layer protein
SIO_010081: GQR93_RS15135
subclass of: SO_0000673
so part of: GQR93_RS15135
location: 25473..27268
location: region:25473-27268:1
so has part: feature:25473-27268:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25473-27268:1:exon

GQR93_RS15140
type: Gene
subclass of: SO_0000704
RO_0002162: 1588
locus tag: GQR93_RS15140
old locus tag: GQR93_15140
so part of: sequence
location: complement(27534..>28299)
location: region:27534-28299:-1
so has part: feature:27534-28299:-1:exon
subclass of: SO_0000010

69059695
type: Gene
SIO_000068: ncbigene

position:27534:-1
position: 27534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28299:-1
position: 28299
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27534-28299:-1:exon

GQR93_RS15140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1588
locus tag: GQR93_RS15140
old locus tag: GQR93_15140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: ITRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVLKKIVIARRTYQGRSALTSFIIVDAQSVKNTATAENKGYDAGKKISGIKRHLAVDINGFPQAIHMTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVLAFLALLLKRF
SIO_010081: GQR93_RS15140
subclass of: SO_0000673
so part of: GQR93_RS15140
location: complement(join(27534..28059,28058..>28299))
location: region:27534-28299:-1
so has part: feature:28058-28299:-1:exon
so has part: feature:27534-28059:-1:exon

WP_159298875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28058-28299:-1:exon

position:28058:-1
position: 28058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27534-28059:-1:exon

position:28059:-1
position: 28059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition