Natribaculum luteum strain IBRC-M 10912 plasmid unnamed2, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales; Natrialbaceae; Natribaculum.
Diverse halophilic archaea isolated from saline environments
Submitted (07-APR-2022) School of Food and Biological Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, Jiangsu 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP095399.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 402.99x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/21/2022 12:44:35\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,642\nCDSs (total) :: 4,574\nGenes (coding) :: 4,396\nCDSs (with protein) :: 4,396\nGenes (RNA) :: 68\nrRNAs :: 4, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 3, 3 (5S, 16S, 23S)\ntRNAs :: 56\nncRNAs :: 2\nPseudo Genes (total) :: 178\nCDSs (without protein) :: 178\nPseudo Genes (ambiguous residues) :: 0 of 178\nPseudo Genes (frameshifted) :: 63 of 178\nPseudo Genes (incomplete) :: 142 of 178\nPseudo Genes (internal stop) :: 38 of 178\nPseudo Genes (multiple problems) :: 51 of 178\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_012945908.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008164830.1
COORDINATES: similar to AA sequence:RefSeq:WP_006092041.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012289077.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020645.2
COORDINATES: similar to AA sequence:RefSeq:WP_006180950.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006180951.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183624.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_008011728.1
COORDINATES: similar to AA sequence:RefSeq:WP_006093041.1
COORDINATES: similar to AA sequence:RefSeq:WP_008015142.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012572.2
COORDINATES: similar to AA sequence:RefSeq:WP_012660224.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006180166.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013876046.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090633.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: protein motif:HMM:NF014442.2
COORDINATES: similar to AA sequence:RefSeq:WP_012945855.1
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008015132.1
COORDINATES: similar to AA sequence:RefSeq:WP_008015233.1
COORDINATES: similar to AA sequence:RefSeq:WP_008015234.1
COORDINATES: similar to AA sequence:RefSeq:WP_008605512.1
COORDINATES: similar to AA sequence:RefSeq:WP_014040852.1
COORDINATES: similar to AA sequence:RefSeq:WP_008014762.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182395.1
COORDINATES: similar to AA sequence:RefSeq:WP_008015114.1
COORDINATES: similar to AA sequence:RefSeq:WP_006648274.1
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006667353.1
COORDINATES: similar to AA sequence:RefSeq:WP_004592748.1
COORDINATES: similar to AA sequence:RefSeq:WP_008580586.1
COORDINATES: similar to AA sequence:RefSeq:WP_008015105.1
COORDINATES: similar to AA sequence:RefSeq:WP_006066872.1
COORDINATES: similar to AA sequence:RefSeq:WP_005554861.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183361.1
COORDINATES: similar to AA sequence:RefSeq:WP_006066876.1
COORDINATES: similar to AA sequence:RefSeq:WP_013035044.1
COORDINATES: similar to AA sequence:RefSeq:WP_008015088.1
COORDINATES: similar to AA sequence:RefSeq:WP_004516469.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006183655.1
COORDINATES: similar to AA sequence:RefSeq:WP_006181068.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090299.1
COORDINATES: protein motif:HMM:NF013125.2
COORDINATES: similar to AA sequence:RefSeq:WP_014053281.1
COORDINATES: similar to AA sequence:RefSeq:WP_009376993.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008015343.1
COORDINATES: similar to AA sequence:RefSeq:WP_007107559.1
COORDINATES: similar to AA sequence:RefSeq:WP_007575360.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008007535.1
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008422996.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008015346.1
COORDINATES: similar to AA sequence:RefSeq:WP_007143097.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060441.1
COORDINATES: similar to AA sequence:RefSeq:WP_006828030.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_011572759.1
COORDINATES: similar to AA sequence:RefSeq:WP_008608490.1
COORDINATES: similar to AA sequence:RefSeq:WP_008015356.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313462.1
COORDINATES: similar to AA sequence:RefSeq:WP_015408940.1
COORDINATES: similar to AA sequence:RefSeq:WP_008015362.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182410.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182386.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182387.1
COORDINATES: similar to AA sequence:RefSeq:WP_008015372.1
COORDINATES: similar to AA sequence:RefSeq:WP_007541998.1
COORDINATES: similar to AA sequence:RefSeq:WP_015310294.1
COORDINATES: similar to AA sequence:RefSeq:WP_014053229.1
COORDINATES: similar to AA sequence:RefSeq:WP_010904232.1
COORDINATES: similar to AA sequence:RefSeq:WP_007143091.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008458711.1
COORDINATES: similar to AA sequence:RefSeq:WP_014865841.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762230.1
COORDINATES: similar to AA sequence:RefSeq:WP_014053099.1
COORDINATES: similar to AA sequence:RefSeq:WP_008444896.1
COORDINATES: similar to AA sequence:RefSeq:WP_009488207.1
COORDINATES: similar to AA sequence:RefSeq:WP_008458700.1
COORDINATES: similar to AA sequence:RefSeq:WP_009488209.1
COORDINATES: similar to AA sequence:RefSeq:WP_014053094.1
COORDINATES: similar to AA sequence:RefSeq:WP_008364407.1
COORDINATES: similar to AA sequence:RefSeq:WP_004596988.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183532.1
COORDINATES: similar to AA sequence:RefSeq:WP_009488261.1
COORDINATES: similar to AA sequence:RefSeq:WP_008014516.1
COORDINATES: similar to AA sequence:RefSeq:WP_007139946.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005579629.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014863926.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004043378.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.