Gudongella oleilytica strain W6 chromosome, complete genome.
Bacteria; Bacillota; Tissierellia; Tissierellales; Tissierellaceae; Gudongella.
Submitted (28-OCT-2018) Microbiological Center, Biogas Institute of Ministry of Agriculture, Renmin South Road, Chengdu 610041, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP035130.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 350.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/24/2023 02:31:00\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,304\nCDSs (total) :: 2,231\nGenes (coding) :: 2,208\nCDSs (with protein) :: 2,208\nGenes (RNA) :: 73\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 57\nncRNAs :: 4\nPseudo Genes (total) :: 23\nCDSs (without protein) :: 23\nPseudo Genes (ambiguous residues) :: 0 of 23\nPseudo Genes (frameshifted) :: 2 of 23\nPseudo Genes (incomplete) :: 15 of 23\nPseudo Genes (internal stop) :: 7 of 23\nPseudo Genes (multiple problems) :: 1 of 23\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
thermophilic, methanogenic hexadecane-degrading culture M82
COORDINATES: similar to AA sequence:RefSeq:WP_008901179.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_005587154.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005399216.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005587152.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006317200.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_004819633.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587148.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_005587146.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
SigB/SigF/SigG family RNA polymerase sigma factor
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_005589172.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005589171.1
COORDINATES: similar to AA sequence:RefSeq:WP_005589169.1
COORDINATES: similar to AA sequence:RefSeq:WP_006315119.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584589.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584587.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005589168.1
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_005588617.1
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF008823.0
COORDINATES: similar to AA sequence:RefSeq:WP_002299351.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF039834.1
COORDINATES: protein motif:HMM:NF013379.2
COORDINATES: protein motif:HMM:TIGR03527.1
sulfurtransferase-like selenium metabolism protein YedF
COORDINATES: protein motif:HMM:NF023251.2
COORDINATES: similar to AA sequence:RefSeq:WP_005588627.1
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005957132.1
COORDINATES: protein motif:HMM:NF016430.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_005582587.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222562.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008901614.1
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_005588629.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_005396942.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588633.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_019108155.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582418.1
COORDINATES: similar to AA sequence:RefSeq:WP_009221815.1
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582422.1
COORDINATES: similar to AA sequence:RefSeq:WP_005397214.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010245761.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_006305742.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582437.1
COORDINATES: similar to AA sequence:RefSeq:WP_006312663.1
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006312666.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02122.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: protein motif:HMM:NF020479.2
COORDINATES: similar to AA sequence:RefSeq:WP_004824681.1
COORDINATES: protein motif:HMM:NF015581.2
COORDINATES: similar to AA sequence:RefSeq:WP_006312679.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005584362.1
GO:0016829 - lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014966546.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007888660.1
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002569156.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: protein motif:HMM:NF013488.2
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012382.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF012488.2
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012062304.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF024788.2
PLD nuclease N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF019350.2
COORDINATES: protein motif:HMM:NF011635.0
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01229.1
GO:0004053 - arginase activity [Evidence IEA]
GO:0019547 - arginine catabolic process to ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00374.1
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_005584606.1
double-cubane-cluster-containing anaerobic reductase
COORDINATES: similar to AA sequence:RefSeq:WP_002839581.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025865.2
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: protein motif:HMM:NF024304.2
COORDINATES: protein motif:HMM:NF024139.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:TIGR00589.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF025885.2
COORDINATES: similar to AA sequence:RefSeq:WP_019118643.1
GO:0008838 - diaminopropionate ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010245114.1
GO:0016787 - hydrolase activity [Evidence IEA]
YgeY family selenium metabolism-linked hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_010245108.1
COORDINATES: similar to AA sequence:RefSeq:WP_010245111.1
COORDINATES: similar to AA sequence:RefSeq:WP_005396999.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587203.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587204.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587206.1
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005584639.1
COORDINATES: protein motif:HMM:NF025693.2
COORDINATES: similar to AA sequence:RefSeq:WP_009431918.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107008.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: protein motif:HMM:NF012493.2
COORDINATES: protein motif:HMM:NF021375.2
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: protein motif:HMM:NF015734.2
COORDINATES: protein motif:HMM:NF025380.2
COORDINATES: similar to AA sequence:RefSeq:WP_002317362.1
COORDINATES: protein motif:HMM:NF025840.2
DarT ssDNA thymidine ADP-ribosyltransferase family protein
COORDINATES: protein motif:HMM:NF015692.2
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF013481.2
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: protein motif:HMM:NF025636.2
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005583261.1
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF004283.0
COORDINATES: protein motif:HMM:NF012398.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014795.2
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: protein motif:HMM:TIGR00507.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF018513.2
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_006306004.1
COORDINATES: similar to AA sequence:RefSeq:WP_006306005.1
GO:0070573 - metallodipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024241.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004824922.1
COORDINATES: similar to AA sequence:RefSeq:WP_009345079.1
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_010245826.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585336.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:TIGR03708.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0043751 - polyphosphate:AMP phosphotransferase activity [Evidence IEA]
GO:0006797 - polyphosphate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020123.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013921.2
COORDINATES: protein motif:HMM:NF028342.2
COORDINATES: similar to AA sequence:RefSeq:WP_005584390.1
COORDINATES: similar to AA sequence:RefSeq:WP_006317232.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006317230.1
indolepyruvate oxidoreductase subunit beta
COORDINATES: protein motif:HMM:NF014094.2
COORDINATES: protein motif:HMM:NF013647.2
GO:0033179 - proton-transporting V-type ATPase, V0 domain [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
V-type ATPase 116kDa subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002837222.1
COORDINATES: similar to AA sequence:RefSeq:WP_004832024.1
COORDINATES: protein motif:HMM:NF014093.2
GO:0033178 - proton-transporting two-sector ATPase complex, catalytic domain [Evidence IEA]
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
V-type ATP synthase subunit E family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002839943.1
COORDINATES: similar to AA sequence:RefSeq:WP_009221549.1
COORDINATES: similar to AA sequence:RefSeq:WP_008902606.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588422.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020581.2
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: similar to AA sequence:RefSeq:WP_019467715.1
COORDINATES: similar to AA sequence:RefSeq:WP_006314818.1
GO:0005507 - copper ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005588417.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012291149.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968473.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006919154.1
GO:0030429 - kynureninase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
COORDINATES: protein motif:HMM:NF027787.2
signal recognition particle sRNA large type
COORDINATES: nucleotide motif:Rfam:14.4:RF01854
COORDINATES: protein motif:HMM:TIGR02174.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584358.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005584359.1
GO:0008150 - biological_process [Evidence IEA]
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_005584360.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: protein motif:HMM:NF014609.2
PhzF family phenazine biosynthesis protein
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: similar to AA sequence:RefSeq:WP_014966957.1
COORDINATES: similar to AA sequence:RefSeq:WP_014966956.1
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_014968267.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: protein motif:HMM:NF015995.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
glycine betaine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF018448.2
threonine/serine exporter family protein
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_005587471.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002841802.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_010242914.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004818851.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004976.0
GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005586928.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00191.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005588732.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: protein motif:HMM:NF013319.2
GO:0008452 - RNA ligase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF012413.2
GO:0004146 - dihydrofolate reductase activity [Evidence IEA]
GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006317586.1
GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025159.2
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_014967284.1
COORDINATES: similar to AA sequence:RefSeq:WP_084691462.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
Most members of this family contain a selenocysteine.; Most members of this family contain a selenocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006310400.1
COORDINATES: protein motif:HMM:NF025616.2
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: protein motif:HMM:NF013413.2
COORDINATES: protein motif:HMM:NF012400.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF016995.2
COORDINATES: similar to AA sequence:RefSeq:WP_004835228.1
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
c-type cytochrome biogenesis protein CcsB
COORDINATES: protein motif:HMM:NF033559.1
COORDINATES: similar to AA sequence:RefSeq:WP_004836609.1
COORDINATES: similar to AA sequence:RefSeq:WP_004832801.1
COORDINATES: similar to AA sequence:RefSeq:WP_009354608.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010244897.1
COORDINATES: similar to AA sequence:RefSeq:WP_004824194.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967341.1
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006310573.1
COORDINATES: protein motif:HMM:TIGR04337.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_005587851.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587852.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009448942.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587854.1
COORDINATES: protein motif:HMM:TIGR00678.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582913.1
COORDINATES: similar to AA sequence:RefSeq:WP_010266056.1
COORDINATES: protein motif:HMM:NF017026.2
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005582915.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014966336.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006310394.1
DNA double-strand break repair nuclease NurA
COORDINATES: similar to AA sequence:RefSeq:WP_004817560.1
COORDINATES: similar to AA sequence:RefSeq:WP_009345256.1
COORDINATES: similar to AA sequence:RefSeq:WP_002836761.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019117737.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02092.1
glucose-1-phosphate adenylyltransferase subunit GlgD
COORDINATES: similar to AA sequence:RefSeq:WP_002837780.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012563.2
GO:0008184 - glycogen phosphorylase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: protein motif:HMM:TIGR02104.1
GO:0051060 - pullulanase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582923.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0009254 - peptidoglycan turnover [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005957016.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582927.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582928.1
GO:0043822 - ribonuclease M5 activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582929.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_010246102.1
COORDINATES: similar to AA sequence:RefSeq:WP_004823894.1
COORDINATES: similar to AA sequence:RefSeq:WP_006314044.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584694.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006307028.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583669.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: similar to AA sequence:RefSeq:WP_006306970.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582275.1
COORDINATES: protein motif:HMM:TIGR02436.1
COORDINATES: similar to AA sequence:RefSeq:WP_006306968.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0050066 - lysine 2,3-aminomutase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046440 - L-lysine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582277.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582278.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582279.1
COORDINATES: similar to AA sequence:RefSeq:WP_006306963.1
GO:0046983 - protein dimerization activity [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
OAM dimerization domain-containing protein
COORDINATES: protein motif:HMM:NF015649.2
BTAD domain-containing putative transcriptional regulator
COORDINATES: protein motif:HMM:TIGR01167.1
LPXTG cell wall anchor domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01786
cyclic di-GMP riboswitch class II; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF021028.2
COORDINATES: protein motif:HMM:TIGR04416.1
COORDINATES: protein motif:HMM:NF019984.2
group II intron maturase-specific domain-containing protein
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:NF012613.2
S-layer homology domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012008915.1
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_008516471.1
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012291006.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: protein motif:HMM:NF024112.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF027890.2
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014966524.1
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF019450.2
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF037639.2
SpaA isopeptide-forming pilin-related protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005585065.1
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF019487.2
COORDINATES: similar to AA sequence:RefSeq:WP_005584556.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584555.1
COORDINATES: protein motif:HMM:NF014740.2
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:NF014732.2
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
Wzz/FepE/Etk N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01007.1
CpsD/CapB family tyrosine-protein kinase
COORDINATES: protein motif:HMM:NF039343.1
CpsB/CapC family capsule biosynthesis tyrosine phosphatase
copper amine oxidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_009430573.1
COORDINATES: protein motif:HMM:TIGR00835.1
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582805.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967323.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_005582808.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582810.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582811.1
COORDINATES: protein motif:HMM:NF025701.2
protease complex subunit PrcB family protein
COORDINATES: protein motif:HMM:TIGR01027.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_019117066.1
GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0046416 - D-amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018087.2
GO:0030420 - establishment of competence for transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010246009.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:TIGR00045.1
COORDINATES: protein motif:HMM:NF014066.2
COORDINATES: protein motif:HMM:NF012945.2
COORDINATES: similar to AA sequence:RefSeq:WP_008687856.1
COORDINATES: similar to AA sequence:RefSeq:WP_004821423.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967384.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: protein motif:HMM:NF005146.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016083.2
COORDINATES: similar to AA sequence:RefSeq:WP_001205006.1
COORDINATES: protein motif:HMM:TIGR00931.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_014967262.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012290383.1
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF014647.2
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005587213.1
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587211.1
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02152.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009430364.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: protein motif:HMM:NF024095.2
COORDINATES: similar to AA sequence:RefSeq:WP_005958079.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005584506.1
COORDINATES: similar to AA sequence:RefSeq:WP_003211100.1
COORDINATES: similar to AA sequence:RefSeq:WP_008902603.1
COORDINATES: similar to AA sequence:RefSeq:WP_004814334.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014968685.1
COORDINATES: similar to AA sequence:RefSeq:WP_008901954.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF019325.2
COORDINATES: similar to AA sequence:RefSeq:WP_008901040.1
COORDINATES: protein motif:HMM:NF010675.0
COORDINATES: similar to AA sequence:RefSeq:WP_005583621.1
COORDINATES: similar to AA sequence:RefSeq:WP_006305128.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_005583131.1
gamma-glutamyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005956561.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005583124.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002836835.1
COORDINATES: similar to AA sequence:RefSeq:WP_006306278.1
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006306274.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583129.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583130.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006306270.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF013607.2
low molecular weight protein arginine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_014966409.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002836820.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008900895.1
COORDINATES: similar to AA sequence:RefSeq:WP_004820315.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_004825977.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006311893.1
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: protein motif:HMM:TIGR01587.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:NF021030.2
GO:0003674 - molecular_function [Evidence IEA]
type I-E CRISPR-associated protein Cse1/CasA
COORDINATES: protein motif:HMM:TIGR02548.1
type I-E CRISPR-associated protein Cse2/CasB
COORDINATES: similar to AA sequence:RefSeq:WP_004835077.1
type I-E CRISPR-associated protein Cas7/Cse4/CasC
COORDINATES: protein motif:HMM:NF021240.2
type I-E CRISPR-associated protein Cas5/CasD
COORDINATES: protein motif:HMM:NF020377.2
type I-E CRISPR-associated protein Cas6/Cse3/CasE
COORDINATES: similar to AA sequence:RefSeq:WP_019108552.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-E CRISPR-associated endonuclease Cas1e
COORDINATES: protein motif:HMM:TIGR00573.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
type I-E CRISPR-associated endoribonuclease Cas2e
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005957962.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014966453.1
COORDINATES: protein motif:HMM:NF012383.2
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: similar to AA sequence:RefSeq:WP_005584516.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584502.1
COORDINATES: protein motif:HMM:NF015648.2
COORDINATES: protein motif:HMM:NF016513.2
COORDINATES: similar to AA sequence:RefSeq:WP_009221730.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_002840721.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_128425316.1
GO:0003747 - translation release factor activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005584490.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968144.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005584484.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584483.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_005584480.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005955985.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_009345413.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004820150.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0051775 - response to redox state [Evidence IEA]
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_003420866.1
COORDINATES: similar to AA sequence:RefSeq:WP_019118288.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF022812.2
COORDINATES: similar to AA sequence:RefSeq:WP_006314530.1
COORDINATES: similar to AA sequence:RefSeq:WP_019118287.1
COORDINATES: similar to AA sequence:RefSeq:WP_004826393.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005582797.1
COORDINATES: similar to AA sequence:RefSeq:WP_006316565.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: similar to AA sequence:RefSeq:WP_002839706.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017828.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
acyl-CoA dehydratase activase-related protein
COORDINATES: protein motif:HMM:NF017927.2
COORDINATES: similar to AA sequence:RefSeq:WP_016291181.1
COORDINATES: similar to AA sequence:RefSeq:WP_002835879.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587839.1
COORDINATES: similar to AA sequence:RefSeq:WP_006314033.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014966247.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582875.1
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_005585993.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_005955862.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_006314507.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005585995.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_006314504.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005585998.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_009372679.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002838563.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034576.1
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: protein motif:HMM:NF013094.2
COORDINATES: similar to AA sequence:RefSeq:WP_006309188.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825368.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005586015.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00135.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_009222515.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_005586021.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_019118073.1
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_014966540.1
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: protein motif:HMM:NF039198.1
COORDINATES: similar to AA sequence:RefSeq:WP_006306506.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004832792.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: similar to AA sequence:RefSeq:WP_010244612.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF015378.2
COORDINATES: protein motif:HMM:NF013253.2
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582752.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF001966.0
COORDINATES: protein motif:HMM:NF025939.2
COORDINATES: similar to AA sequence:RefSeq:WP_007037831.1
COORDINATES: protein motif:HMM:NF033545.0
COORDINATES: similar to AA sequence:RefSeq:WP_004614566.1
COORDINATES: protein motif:HMM:NF019349.2
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012268941.1
DDE-type integrase/transposase/recombinase
COORDINATES: protein motif:HMM:NF001614.1
3-isopropylmalate dehydratase large subunit
COORDINATES: protein motif:HMM:TIGR02087.1
COORDINATES: protein motif:HMM:NF014564.2
COORDINATES: protein motif:HMM:TIGR02089.1
GO:0009027 - tartrate dehydrogenase activity [Evidence IEA]
GO:0046395 - carboxylic acid catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:NF012722.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
histidine kinase dimerization/phospho-acceptor domain-containing protein
COORDINATES: protein motif:HMM:NF027796.2
COORDINATES: protein motif:HMM:NF017416.2
COORDINATES: similar to AA sequence:RefSeq:WP_009354649.1
COORDINATES: similar to AA sequence:RefSeq:WP_009447523.1
COORDINATES: protein motif:HMM:NF015132.2
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_006313294.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:NF012904.2
dihydrodipicolinate synthase family protein
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_004824447.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583607.1
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: similar to AA sequence:RefSeq:WP_010248038.1
GO:0018826 - methionine gamma-lyase activity [Evidence IEA]
GO:0009093 - cysteine catabolic process [Evidence IEA]; GO:0009087 - methionine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013228.2
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583240.1
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: similar to AA sequence:RefSeq:WP_005583237.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: similar to AA sequence:RefSeq:WP_005583236.1
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:NF024804.2
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF016232.2
putative DNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005396897.1
COORDINATES: protein motif:HMM:NF015297.2
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013884.2
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_004837258.1
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: similar to AA sequence:RefSeq:WP_004837259.1
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF025556.2
COORDINATES: protein motif:HMM:NF012464.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_005586543.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:NF001770.0
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013540.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: protein motif:HMM:NF019149.2
COORDINATES: similar to AA sequence:RefSeq:WP_005588614.1
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: similar to AA sequence:RefSeq:WP_031587700.1
COORDINATES: similar to AA sequence:RefSeq:WP_012993164.1
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_004819514.1
GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010244531.1
GO:0030412 - formimidoyltetrahydrofolate cyclodeaminase activity [Evidence IEA]; GO:0030409 - glutamate formimidoyltransferase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004822045.1
cyclodeaminase/cyclohydrolase family protein
COORDINATES: protein motif:HMM:NF017747.2
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004817554.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012832.2
COORDINATES: similar to AA sequence:RefSeq:WP_006317477.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: protein motif:HMM:NF022635.2
COORDINATES: similar to AA sequence:RefSeq:WP_009222561.1
PLP-dependent aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:NF012385.2
COORDINATES: similar to AA sequence:RefSeq:WP_005584419.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005586699.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_005586701.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_009354413.1
COORDINATES: protein motif:HMM:TIGR01910.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011676756.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF001911.0
COORDINATES: similar to AA sequence:RefSeq:WP_005584421.1
COORDINATES: protein motif:HMM:NF013237.2
COORDINATES: protein motif:HMM:NF012589.2
COORDINATES: protein motif:HMM:NF022805.2
COORDINATES: protein motif:HMM:NF018991.2
COORDINATES: similar to AA sequence:RefSeq:WP_004167042.1
COORDINATES: protein motif:HMM:NF014375.2
GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog.; Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR01730.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582544.1
glycine/sarcosine/betaine reductase component B subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006316653.1
glycine/betaine/sarcosine/D-proline family reductase selenoprotein B
COORDINATES: protein motif:HMM:TIGR00518.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008901096.1
COORDINATES: similar to AA sequence:RefSeq:WP_004832997.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF013933.2
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF013706.2
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:TIGR01767.2
GO:0046522 - S-methyl-5-thioribose kinase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002607281.1
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005589003.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00652.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04350.1
COORDINATES: protein motif:HMM:NF019342.2
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: protein motif:HMM:NF025793.2
COORDINATES: similar to AA sequence:RefSeq:WP_006307599.1
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:NF012514.2
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR02058.1
COORDINATES: protein motif:HMM:TIGR03182.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012009660.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: protein motif:HMM:NF013663.2
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012424.2
dihydrolipoamide acetyltransferase family protein
COORDINATES: protein motif:HMM:TIGR01350.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004825454.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012596.2
COORDINATES: protein motif:HMM:NF018410.2
COORDINATES: similar to AA sequence:RefSeq:WP_005397758.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF008519.0
COORDINATES: protein motif:HMM:TIGR00254.1
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF021443.2
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: similar to AA sequence:RefSeq:WP_005586994.1
COORDINATES: similar to AA sequence:RefSeq:WP_005586995.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582579.1
COORDINATES: similar to AA sequence:RefSeq:WP_005956273.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582340.1
COORDINATES: protein motif:HMM:NF016292.2
COORDINATES: similar to AA sequence:RefSeq:WP_005585018.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582337.1
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587931.1
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002839082.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582249.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005582250.1
COORDINATES: similar to AA sequence:RefSeq:WP_009447734.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582254.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004832569.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582256.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006316962.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014758038.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: protein motif:HMM:TIGR03026.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025582.2
COORDINATES: protein motif:HMM:TIGR03609.1
GO:0046919 - pyruvyltransferase activity [Evidence IEA]
GO:0042545 - cell wall modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019108055.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005586996.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587718.1
alanine--glyoxylate aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587080.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006316985.1
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_005587059.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005587060.1
COORDINATES: similar to AA sequence:RefSeq:WP_008901648.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004835727.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014626.2
COORDINATES: similar to AA sequence:RefSeq:WP_006308448.1
COORDINATES: similar to AA sequence:RefSeq:WP_004820259.1
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014967396.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588312.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588313.1
COORDINATES: similar to AA sequence:RefSeq:WP_009345922.1
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008902620.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968174.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005588318.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005588320.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005588322.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822657.1
COORDINATES: similar to AA sequence:RefSeq:WP_002842094.1
uridine diphosphate-N-acetylglucosamine-binding protein YvcK
COORDINATES: similar to AA sequence:RefSeq:WP_005588327.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588328.1
COORDINATES: similar to AA sequence:RefSeq:WP_004820234.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005588330.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588331.1
COORDINATES: similar to AA sequence:RefSeq:WP_015777624.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002840236.1
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002836705.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005586924.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587957.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016104710.1
COORDINATES: similar to AA sequence:RefSeq:WP_002286835.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587953.1
S1-like domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014966560.1
COORDINATES: similar to AA sequence:RefSeq:WP_014966792.1
COORDINATES: protein motif:HMM:NF005373.0
COORDINATES: similar to AA sequence:RefSeq:WP_009430219.1
COORDINATES: protein motif:HMM:NF025379.2
COORDINATES: protein motif:HMM:TIGR00479.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: protein motif:HMM:NF013731.2
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: protein motif:HMM:NF014177.2
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
COORDINATES: protein motif:HMM:NF025554.2
COORDINATES: protein motif:HMM:NF039356.1
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: similar to AA sequence:RefSeq:WP_004115145.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: protein motif:HMM:TIGR01550.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: protein motif:HMM:NF025571.2
COORDINATES: protein motif:HMM:NF024365.2
COORDINATES: protein motif:HMM:NF040308.1
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF040179.1
COORDINATES: similar to AA sequence:RefSeq:WP_015513325.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838153.1
gamma-glutamylcyclotransferase family protein
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF039730.1
COORDINATES: protein motif:HMM:NF039658.1
COORDINATES: protein motif:HMM:NF037847.2
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: protein motif:HMM:NF024554.2
COORDINATES: protein motif:HMM:NF014581.2
type IV secretory system conjugative DNA transfer family protein
COORDINATES: protein motif:HMM:NF025107.2
COORDINATES: protein motif:HMM:NF015935.2
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: similar to AA sequence:RefSeq:WP_005585518.1
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF016724.2
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: similar to AA sequence:RefSeq:WP_005956877.1
COORDINATES: similar to AA sequence:RefSeq:WP_013782344.1
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_003865500.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: protein motif:HMM:NF013522.2
COORDINATES: protein motif:HMM:NF025124.2
COORDINATES: similar to AA sequence:RefSeq:WP_086558081.1
COORDINATES: protein motif:HMM:NF033563.0
COORDINATES: protein motif:HMM:NF021485.2
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: protein motif:HMM:TIGR01982.1
GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018271.2
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_086558248.1
GO:0015074 - DNA integration [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: protein motif:HMM:NF012772.2
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_005398867.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968581.1
COORDINATES: protein motif:HMM:NF016983.2
COORDINATES: similar to AA sequence:RefSeq:WP_005584389.1
COORDINATES: protein motif:HMM:TIGR02187.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF024545.2
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006317678.1
COORDINATES: protein motif:HMM:NF013954.2
COORDINATES: protein motif:HMM:TIGR00629.1
GO:0004518 - nuclease activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0009650 - UV protection [Evidence IEA]
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: similar to AA sequence:RefSeq:WP_004823828.1
COORDINATES: protein motif:HMM:NF012675.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587833.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822335.1
COORDINATES: similar to AA sequence:RefSeq:WP_004819407.1
COORDINATES: similar to AA sequence:RefSeq:WP_002838569.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF008750.0
COORDINATES: protein motif:HMM:NF020543.2
COORDINATES: protein motif:HMM:NF014678.2
COORDINATES: similar to AA sequence:RefSeq:WP_019034123.1
COORDINATES: protein motif:HMM:NF025589.2
COORDINATES: protein motif:HMM:NF013782.2
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004822157.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009430319.1
COORDINATES: similar to AA sequence:RefSeq:WP_006307481.1
COORDINATES: protein motif:HMM:NF010047.0
GO:0010181 - FMN binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0003959 - NADPH dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587948.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: protein motif:HMM:NF006777.0
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_002834994.1
Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002834993.1
2Fe-2S iron-sulfur cluster binding domain-containing protein
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582325.1
COORDINATES: protein motif:HMM:NF015729.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582327.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582330.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_005586958.1
COORDINATES: similar to AA sequence:RefSeq:WP_005586962.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107015.1
COORDINATES: similar to AA sequence:RefSeq:WP_005589010.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005589008.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004824647.1
COORDINATES: similar to AA sequence:RefSeq:WP_005589005.1
COORDINATES: similar to AA sequence:RefSeq:WP_005589004.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588997.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588996.1
COORDINATES: protein motif:HMM:NF013126.2
COORDINATES: similar to AA sequence:RefSeq:WP_005588862.1
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009344875.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588192.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_005588180.1
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: similar to AA sequence:RefSeq:WP_009346005.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107194.1
GO:0051301 - cell division [Evidence IEA]
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: similar to AA sequence:RefSeq:WP_005587388.1
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004826032.1
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_005587376.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
histidinol-phosphatase HisJ family protein
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: similar to AA sequence:RefSeq:WP_006307073.1
GO:0001727 - lipid kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587367.1
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587364.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822046.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005956953.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006315116.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013346.2
COORDINATES: similar to AA sequence:RefSeq:WP_005584216.1
selenium metabolism-associated LysR family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00745.1
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015515.2
COORDINATES: similar to AA sequence:RefSeq:WP_006307560.1
COORDINATES: protein motif:HMM:NF013078.2
zinc dependent phospholipase C family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005956733.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005583805.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_005583803.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_005583801.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: similar to AA sequence:RefSeq:WP_010242310.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_004833006.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009222183.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967888.1
COORDINATES: similar to AA sequence:RefSeq:WP_010242318.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0031179 - peptide modification [Evidence IEA]
thioether cross-link-forming SCIFF peptide maturase
COORDINATES: similar to AA sequence:RefSeq:WP_006312036.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005583284.1
COORDINATES: protein motif:HMM:NF018058.2
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_005583287.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_004838772.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005583290.1
COORDINATES: protein motif:HMM:TIGR03994.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010242331.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004833527.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005586106.1
metal-sensitive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005586111.1
COORDINATES: protein motif:HMM:NF016354.2
COORDINATES: similar to AA sequence:RefSeq:WP_002836541.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005586117.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_005586118.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046168 - glycerol-3-phosphate catabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_006308877.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967845.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_005586132.1
GO:0090529 - cell septum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: protein motif:HMM:NF037631.2
COORDINATES: similar to AA sequence:RefSeq:WP_006308883.1
COORDINATES: similar to AA sequence:RefSeq:WP_005586145.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006308889.1
COORDINATES: similar to AA sequence:RefSeq:WP_003048067.1
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: similar to AA sequence:RefSeq:WP_005586148.1
NFACT RNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006308902.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290685.1
COORDINATES: similar to AA sequence:RefSeq:WP_004821334.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005586152.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_005586153.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_005586155.1
GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008902686.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005586158.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005586159.1
COORDINATES: similar to AA sequence:RefSeq:WP_006308915.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_008902682.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_005586162.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_005586163.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
Stk1 family PASTA domain-containing Ser/Thr kinase
COORDINATES: similar to AA sequence:RefSeq:WP_005586164.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_009732812.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005585411.1
GO:0015234 - thiamine transmembrane transporter activity [Evidence IEA]
GO:0015888 - thiamine transport [Evidence IEA]
energy-coupled thiamine transporter ThiT
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019106947.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583367.1
Asp23/Gls24 family envelope stress response protein
COORDINATES: similar to AA sequence:RefSeq:WP_019106949.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967812.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005583364.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_004816816.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006311094.1
COORDINATES: protein motif:HMM:NF010191.0
COORDINATES: similar to AA sequence:RefSeq:WP_010245517.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_004822430.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583355.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005583353.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006308995.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009222293.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF016205.2
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005587771.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008902247.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587773.1
COORDINATES: protein motif:HMM:TIGR02273.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005587776.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_005956838.1
COORDINATES: similar to AA sequence:RefSeq:WP_002835324.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008902388.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004826102.1
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012290148.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_014967755.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967754.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290461.1
GTP-sensing pleiotropic transcriptional regulator CodY
COORDINATES: similar to AA sequence:RefSeq:WP_006312298.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107181.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006312302.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019107179.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967711.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582696.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012290593.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:NF001688.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582700.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431486.1
COORDINATES: similar to AA sequence:RefSeq:WP_006312323.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222211.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010242399.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_005582707.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004162.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_009345146.1
COORDINATES: similar to AA sequence:RefSeq:WP_010242394.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006312338.1
COORDINATES: similar to AA sequence:RefSeq:WP_004824123.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582718.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107162.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582720.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_005582721.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF001813.0
COORDINATES: similar to AA sequence:RefSeq:WP_009222225.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582726.1
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582728.1
COORDINATES: similar to AA sequence:RefSeq:WP_010242372.1
COORDINATES: similar to AA sequence:RefSeq:WP_004824068.1
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582733.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967681.1
COORDINATES: similar to AA sequence:RefSeq:WP_005956472.1
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004824001.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034581.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967665.1
GO:0006378 - mRNA polyadenylation [Evidence IEA]; GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006310505.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582743.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009448701.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_005582208.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582207.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582206.1
COORDINATES: similar to AA sequence:RefSeq:WP_019034518.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
COORDINATES: similar to AA sequence:RefSeq:WP_005582203.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006307259.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006307260.1
GO:0004106 - chorismate mutase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967580.1
COORDINATES: similar to AA sequence:RefSeq:WP_006310352.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005582196.1
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006310349.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_006310348.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009598251.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582189.1
oxaloacetate decarboxylase subunit alpha
COORDINATES: protein motif:HMM:NF018645.2
COORDINATES: similar to AA sequence:RefSeq:WP_008902293.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967558.1
GO:0005515 - protein binding [Evidence IEA]
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582865.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585641.1
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004838911.1
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967535.1
COORDINATES: similar to AA sequence:RefSeq:WP_005586098.1
COORDINATES: similar to AA sequence:RefSeq:WP_005586097.1
COORDINATES: protein motif:HMM:TIGR01280.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: protein motif:HMM:NF013012.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006306751.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:NF015721.2
COORDINATES: similar to AA sequence:RefSeq:WP_005586078.1
COORDINATES: similar to AA sequence:RefSeq:WP_002838657.1
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: protein motif:HMM:NF019575.2
COORDINATES: protein motif:HMM:TIGR02532.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: protein motif:HMM:NF022554.2
COORDINATES: similar to AA sequence:RefSeq:WP_005586058.1
COORDINATES: protein motif:HMM:NF019170.2
COORDINATES: protein motif:HMM:NF022633.2
COORDINATES: similar to AA sequence:RefSeq:WP_008902381.1
COORDINATES: similar to AA sequence:RefSeq:WP_006314595.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005586055.1
type IV pilus twitching motility protein PilT
COORDINATES: similar to AA sequence:RefSeq:WP_005586054.1
COORDINATES: similar to AA sequence:RefSeq:WP_005586041.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005956184.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967492.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587889.1
COORDINATES: similar to AA sequence:RefSeq:WP_006315219.1
COORDINATES: similar to AA sequence:RefSeq:WP_012290528.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222378.1
COORDINATES: similar to AA sequence:RefSeq:WP_019034867.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587896.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587897.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822788.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587900.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_008678265.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
Fe-S cluster assembly scaffold protein NifU
COORDINATES: similar to AA sequence:RefSeq:WP_014967478.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587906.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587919.1
COORDINATES: similar to AA sequence:RefSeq:WP_009345990.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019107350.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034795.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_005585872.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585873.1
GlmL-related ornithine degradation protein
COORDINATES: similar to AA sequence:RefSeq:WP_005585874.1
D-ornithine 4,5-aminomutase subunit OraE
COORDINATES: similar to AA sequence:RefSeq:WP_006308370.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585876.1
2-amino-4-oxopentanoate thiolase subunit OrtB
COORDINATES: similar to AA sequence:RefSeq:WP_006308368.1
2-amino-4-oxopentanoate thiolase subunit OrtA
COORDINATES: similar to AA sequence:RefSeq:WP_006308367.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585880.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222123.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005585891.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006308843.1
COORDINATES: protein motif:HMM:NF017734.2
COORDINATES: similar to AA sequence:RefSeq:WP_005585895.1
COORDINATES: protein motif:HMM:NF015739.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014967449.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006308835.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_008902031.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:NF013100.2
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005585905.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_012290515.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_002837900.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_012290384.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005585919.1
COORDINATES: protein motif:HMM:TIGR04518.1
folate family ECF transporter S component
COORDINATES: nucleotide motif:Rfam:14.4:RF01831
THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR01906.1
COORDINATES: similar to AA sequence:RefSeq:WP_009448967.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009430917.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006312090.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582049.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582050.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967188.1
COORDINATES: protein motif:HMM:TIGR02074.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582064.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF014630.2
C4-type zinc ribbon domain-containing protein
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_006307865.1
COORDINATES: similar to AA sequence:RefSeq:WP_009448821.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010244764.1
GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_005587660.1
pyruvate, water dikinase regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_005587661.1
COORDINATES: similar to AA sequence:RefSeq:WP_006315551.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019106990.1
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_005398761.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587667.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006305373.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244786.1
COORDINATES: similar to AA sequence:RefSeq:WP_012290595.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009222322.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431904.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005587681.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244803.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825452.1
COORDINATES: similar to AA sequence:RefSeq:WP_005957663.1
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005587685.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967967.1
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009222332.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019107028.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587691.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:TIGR00539.1
COORDINATES: similar to AA sequence:RefSeq:WP_019034747.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587885.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967979.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: protein motif:HMM:NF014342.2
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582148.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582146.1
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: similar to AA sequence:RefSeq:WP_014968110.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011592930.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005582142.1
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004815648.1
COORDINATES: similar to AA sequence:RefSeq:WP_008902695.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582139.1
COORDINATES: protein motif:HMM:NF000840.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006315667.1
ribosome assembly RNA-binding protein YhbY
COORDINATES: similar to AA sequence:RefSeq:WP_019107664.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582131.1
COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_005582129.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582128.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03936.1
TIGR03936 family radical SAM-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_009431595.1
TIGR03960 family B12-binding radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_005588763.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0000918 - division septum site selection [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_005588762.1
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01222.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015662.2
COORDINATES: protein motif:HMM:NF016019.2
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005588757.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588816.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588754.1
COORDINATES: similar to AA sequence:RefSeq:WP_006315699.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588751.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967154.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588749.1
RnfABCDGE type electron transport complex subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_004832819.1
GO:0009055 - electron transfer activity [Evidence IEA]
RnfABCDGE type electron transport complex subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_005588746.1
COORDINATES: protein motif:HMM:TIGR01947.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
RnfABCDGE type electron transport complex subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_014967149.1
COORDINATES: similar to AA sequence:RefSeq:WP_006315722.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005955749.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00545.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012290791.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582072.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825448.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582077.1
COORDINATES: similar to AA sequence:RefSeq:WP_005397602.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582079.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967097.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014628.2
COORDINATES: similar to AA sequence:RefSeq:WP_006315448.1
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006317233.1
GO:0016746 - acyltransferase activity [Evidence IEA]
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: protein motif:HMM:NF024707.2
B12-binding domain-containing radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_006311055.1
COORDINATES: similar to AA sequence:RefSeq:WP_005955710.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005582105.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:NF017016.2
COORDINATES: similar to AA sequence:RefSeq:WP_019107650.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010243033.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_006311024.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222288.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107679.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010244161.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430370.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00558
ribosomal protein L20 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_006310997.1
GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009431331.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009221846.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006310986.1
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006310984.1
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005588966.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF025635.2
COORDINATES: similar to AA sequence:RefSeq:WP_014967033.1
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005588954.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005584365.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF012417.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014073.2
tripartite tricarboxylate transporter permease
COORDINATES: protein motif:HMM:NF018979.2
tripartite tricarboxylate transporter TctB family protein
COORDINATES: protein motif:HMM:NF015366.2
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: protein motif:HMM:NF041098.2
GO:0006020 - inositol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014653.2
COORDINATES: similar to AA sequence:RefSeq:WP_002443355.1
malic enzyme-like NAD(P)-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014966324.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005377154.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584368.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: protein motif:HMM:NF014724.2
GGDEF domain-containing phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_014968841.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968842.1
COORDINATES: similar to AA sequence:RefSeq:WP_012094141.1
COORDINATES: protein motif:HMM:NF014171.2
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
TrkA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008901589.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583402.1
COORDINATES: similar to AA sequence:RefSeq:WP_008900860.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584369.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004838820.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014598.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587009.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222644.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: similar to AA sequence:RefSeq:WP_006317166.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: protein motif:HMM:NF005722.0
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583408.1
COORDINATES: protein motif:HMM:NF014038.2
COORDINATES: similar to AA sequence:RefSeq:WP_005398467.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005957546.1
COORDINATES: protein motif:HMM:NF024904.2
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF013962.2
COORDINATES: protein motif:HMM:NF013621.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587397.1
COORDINATES: similar to AA sequence:RefSeq:WP_006305832.1
COORDINATES: similar to AA sequence:RefSeq:WP_005967406.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430519.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033788.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583086.1
COORDINATES: similar to AA sequence:RefSeq:WP_012290786.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585153.1
COORDINATES: protein motif:HMM:NF017868.2
COORDINATES: similar to AA sequence:RefSeq:WP_005398236.1
COORDINATES: protein motif:HMM:NF017655.2
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: protein motif:HMM:TIGR00266.1
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: protein motif:HMM:NF025067.2
COORDINATES: protein motif:HMM:NF024758.2
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015269530.1
COORDINATES: protein motif:HMM:NF016312.2
GO:0051499 - D-aminoacyl-tRNA deacylase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005585938.1
COORDINATES: protein motif:HMM:NF023156.2
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587875.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: protein motif:HMM:NF013811.2
COORDINATES: protein motif:HMM:NF021348.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587867.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587865.1
COORDINATES: protein motif:HMM:NF012401.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587863.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01055
molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_005397620.1
COORDINATES: protein motif:HMM:TIGR01771.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015159.2
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005585021.1
COORDINATES: protein motif:HMM:NF018021.2
COORDINATES: similar to AA sequence:RefSeq:WP_005589211.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:TIGR00317.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005588158.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006306012.1
COORDINATES: similar to AA sequence:RefSeq:WP_006306013.1
COORDINATES: similar to AA sequence:RefSeq:WP_017560897.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588393.1
COORDINATES: protein motif:HMM:NF037183.2
COORDINATES: similar to AA sequence:RefSeq:WP_005585154.1
COORDINATES: protein motif:HMM:NF018508.2
COORDINATES: protein motif:HMM:NF015997.2
cysteine-rich small domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010780284.1
COORDINATES: similar to AA sequence:RefSeq:WP_006313345.1
COORDINATES: similar to AA sequence:RefSeq:WP_005586940.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825583.1
COORDINATES: protein motif:HMM:NF024748.2
COORDINATES: protein motif:HMM:NF015448.2
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
phenylalanine--tRNA ligase beta subunit-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_005585178.1
COORDINATES: protein motif:HMM:NF014433.2
COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1
COORDINATES: protein motif:HMM:NF014605.2
COORDINATES: similar to AA sequence:RefSeq:WP_008901433.1
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: similar to AA sequence:RefSeq:WP_006310691.1
COORDINATES: protein motif:HMM:NF001299.0
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587815.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0003955 - NAD(P)H dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_005586718.1
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000022439.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
large-conductance mechanosensitive channel protein MscL
COORDINATES: protein motif:HMM:NF024144.2
COORDINATES: similar to AA sequence:RefSeq:WP_002378843.1
COORDINATES: protein motif:HMM:NF024908.2
COORDINATES: similar to AA sequence:RefSeq:WP_004103219.1
COORDINATES: similar to AA sequence:RefSeq:WP_014966784.1
COORDINATES: protein motif:HMM:NF025945.2
COORDINATES: protein motif:HMM:NF017520.2
COORDINATES: protein motif:HMM:NF016754.2
COORDINATES: protein motif:HMM:NF021092.2
COORDINATES: protein motif:HMM:NF027776.2
COORDINATES: protein motif:HMM:NF022810.2
COORDINATES: protein motif:HMM:TIGR01563.1
GO:0044423 - virion component [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01560.2
GO:0016032 - viral process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000121277.1
COORDINATES: similar to AA sequence:RefSeq:WP_012102984.1
COORDINATES: similar to AA sequence:RefSeq:WP_012102985.1
COORDINATES: similar to AA sequence:RefSeq:WP_019116077.1
COORDINATES: similar to AA sequence:RefSeq:WP_004835166.1
COORDINATES: similar to AA sequence:RefSeq:WP_019116083.1
COORDINATES: similar to AA sequence:RefSeq:WP_008400058.1
COORDINATES: similar to AA sequence:RefSeq:WP_019116086.1
COORDINATES: similar to AA sequence:RefSeq:WP_004835092.1
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004835161.1
COORDINATES: similar to AA sequence:RefSeq:WP_002349535.1
COORDINATES: similar to AA sequence:RefSeq:WP_002362759.1
COORDINATES: similar to AA sequence:RefSeq:WP_000891144.1
COORDINATES: protein motif:HMM:NF017116.2
COORDINATES: similar to AA sequence:RefSeq:WP_004400050.1
COORDINATES: similar to AA sequence:RefSeq:WP_019035294.1
phage antirepressor KilAC domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008901288.1
COORDINATES: similar to AA sequence:RefSeq:WP_002349544.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430191.1
COORDINATES: similar to AA sequence:RefSeq:WP_019117874.1
COORDINATES: protein motif:HMM:NF019886.2
COORDINATES: similar to AA sequence:RefSeq:WP_002531043.1
COORDINATES: protein motif:HMM:NF033516.0
COORDINATES: similar to AA sequence:RefSeq:WP_076611912.1
COORDINATES: protein motif:HMM:NF014442.2
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF037510.2
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_005585160.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585162.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967246.1
D-alanine--D-alanine ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009430448.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_006311829.1
COORDINATES: similar to AA sequence:RefSeq:WP_006311832.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585167.1
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: protein motif:HMM:NF013143.2
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013465.2
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_000103948.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006311836.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_019115858.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015777697.1
COORDINATES: similar to AA sequence:RefSeq:WP_008901256.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF016114.2
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005585175.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005585180.1
glycine/sarcosine/betaine reductase complex component C subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009372447.1
glycine/sarcosine/betaine reductase complex component C subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011861534.1
GO:0030700 - glycine reductase complex [Evidence IEA]
GO:0030699 - glycine reductase activity [Evidence IEA]
glycine reductase complex selenoprotein B
COORDINATES: similar to AA sequence:RefSeq:WP_115322126.1
glycine/sarcosine/betaine reductase complex selenoprotein A
COORDINATES: similar to AA sequence:RefSeq:WP_004269617.1
COORDINATES: similar to AA sequence:RefSeq:WP_005331244.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585189.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005585190.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585191.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: protein motif:HMM:NF010068.0
heme ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006315494.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF016202.2
COORDINATES: similar to AA sequence:RefSeq:WP_005585197.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005585198.1
COORDINATES: similar to AA sequence:RefSeq:WP_006315475.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002836358.1
COORDINATES: similar to AA sequence:RefSeq:WP_009447608.1
COORDINATES: similar to AA sequence:RefSeq:WP_004824892.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004822724.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005955491.1
COORDINATES: protein motif:HMM:NF019507.2
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: similar to AA sequence:RefSeq:WP_004824884.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430100.1
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: similar to AA sequence:RefSeq:WP_004821157.1
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: similar to AA sequence:RefSeq:WP_005582351.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006314137.1
COORDINATES: similar to AA sequence:RefSeq:WP_004838807.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: similar to AA sequence:RefSeq:WP_005586978.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019108354.1
COORDINATES: similar to AA sequence:RefSeq:WP_004825091.1
COORDINATES: similar to AA sequence:RefSeq:WP_002837650.1
COORDINATES: similar to AA sequence:RefSeq:WP_006316716.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_010245129.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005586972.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_005586971.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_005586969.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014966839.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430056.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025112.2
COORDINATES: similar to AA sequence:RefSeq:WP_004832785.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005583277.1
COORDINATES: similar to AA sequence:RefSeq:WP_002442508.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_006312638.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009354367.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
enoyl-[acyl-carrier-protein] reductase FabK
COORDINATES: similar to AA sequence:RefSeq:WP_014967779.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583272.1
COORDINATES: protein motif:HMM:NF015047.2
COORDINATES: similar to AA sequence:RefSeq:WP_006305281.1
COORDINATES: similar to AA sequence:RefSeq:WP_006305284.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019108374.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: similar to AA sequence:RefSeq:WP_009120596.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583262.1
COORDINATES: similar to AA sequence:RefSeq:WP_006316444.1
COORDINATES: similar to AA sequence:RefSeq:WP_006316445.1
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: similar to AA sequence:RefSeq:WP_005583258.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: protein motif:HMM:NF036410.2
COORDINATES: similar to AA sequence:RefSeq:WP_010242416.1
COORDINATES: similar to AA sequence:RefSeq:WP_016716529.1
COORDINATES: similar to AA sequence:RefSeq:WP_010246885.1
COORDINATES: similar to AA sequence:RefSeq:WP_006310607.1
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006316930.1
COORDINATES: similar to AA sequence:RefSeq:WP_014966889.1
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_005583232.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583229.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583228.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583227.1
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002838547.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_004834922.1
COORDINATES: similar to AA sequence:RefSeq:WP_010247555.1
COORDINATES: similar to AA sequence:RefSeq:WP_019108417.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583221.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005583219.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583217.1
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_014968372.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005957415.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004824798.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
COORDINATES: similar to AA sequence:RefSeq:WP_004833590.1
COORDINATES: similar to AA sequence:RefSeq:WP_009221332.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:YP_500957.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968379.1
KOW domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004820365.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005583206.1
COORDINATES: similar to AA sequence:RefSeq:WP_002840173.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244369.1
COORDINATES: similar to AA sequence:RefSeq:WP_003194373.1
COORDINATES: similar to AA sequence:RefSeq:WP_009447719.1
COORDINATES: similar to AA sequence:RefSeq:WP_002836127.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002837393.1
COORDINATES: similar to AA sequence:RefSeq:WP_001140799.1
COORDINATES: similar to AA sequence:RefSeq:WP_002837392.1
COORDINATES: similar to AA sequence:RefSeq:WP_004833611.1
COORDINATES: similar to AA sequence:RefSeq:WP_002460061.1
COORDINATES: similar to AA sequence:RefSeq:WP_003022794.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583193.1
COORDINATES: similar to AA sequence:RefSeq:WP_002836117.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583191.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244411.1
COORDINATES: similar to AA sequence:RefSeq:WP_005398638.1
COORDINATES: similar to AA sequence:RefSeq:WP_002837367.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430728.1
COORDINATES: similar to AA sequence:RefSeq:WP_004833621.1
COORDINATES: similar to AA sequence:RefSeq:WP_004833622.1
COORDINATES: similar to AA sequence:RefSeq:WP_019190281.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004269603.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585408.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244945.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968407.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583177.1
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005583176.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_009221946.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_005583175.1
COORDINATES: similar to AA sequence:RefSeq:WP_009221398.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_006308042.1
COORDINATES: similar to AA sequence:RefSeq:WP_002835316.1
COORDINATES: similar to AA sequence:RefSeq:WP_002838609.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_006308045.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355470.1
COORDINATES: protein motif:HMM:NF006145.0
RNA polymerase sporulation sigma factor SigH
COORDINATES: similar to AA sequence:RefSeq:WP_005584065.1
COORDINATES: similar to AA sequence:RefSeq:WP_004833065.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_019034656.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006314776.1
ribonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009221930.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009431730.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005584093.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005956478.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_005956505.1
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005584087.1
COORDINATES: similar to AA sequence:RefSeq:WP_009222594.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968451.1
COORDINATES: similar to AA sequence:RefSeq:WP_008901935.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968454.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:NF002194.0
GO:0046314 - phosphocreatine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014232.2
COORDINATES: similar to AA sequence:RefSeq:WP_006312163.1
COORDINATES: protein motif:HMM:NF016364.2
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019034689.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587929.1
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:NF007714.0
nitrous oxide-stimulated promoter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005582798.1
COORDINATES: similar to AA sequence:RefSeq:WP_005586944.1
COORDINATES: protein motif:HMM:TIGR02227.1
COORDINATES: similar to AA sequence:RefSeq:WP_009430122.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582336.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: protein motif:HMM:NF016705.2
COORDINATES: protein motif:HMM:TIGR01813.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004166933.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF028237.2
COORDINATES: similar to AA sequence:RefSeq:WP_014967386.1
COORDINATES: similar to AA sequence:RefSeq:WP_004838040.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]; GO:0034979 - NAD-dependent protein deacetylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF040311.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968866.1
COORDINATES: protein motif:HMM:NF013500.2
COORDINATES: similar to AA sequence:RefSeq:WP_005397894.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005584038.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009222088.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005588588.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588587.1
COORDINATES: protein motif:HMM:TIGR00348.1
type I restriction endonuclease subunit R
COORDINATES: similar to AA sequence:RefSeq:WP_016648306.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588580.1
COORDINATES: similar to AA sequence:RefSeq:WP_009346086.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005584699.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006315923.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014968493.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005583045.1
COORDINATES: similar to AA sequence:RefSeq:WP_019034454.1
COORDINATES: similar to AA sequence:RefSeq:WP_006309666.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_005583048.1
COORDINATES: protein motif:HMM:TIGR01195.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583050.1
carboxyl transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005583051.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583052.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: similar to AA sequence:RefSeq:WP_006309684.1
cobalamin B12-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006309686.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587606.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587607.1
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006309704.1
S1 RNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004833101.1
COORDINATES: similar to AA sequence:RefSeq:WP_002838549.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587622.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014968509.1
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587626.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587627.1
COORDINATES: similar to AA sequence:RefSeq:WP_019107749.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587630.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_005587631.1
GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034722.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587634.1
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006313853.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587636.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587638.1
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587640.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009448762.1
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014968534.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587643.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024945.2
COORDINATES: protein motif:HMM:NF006771.0
COORDINATES: similar to AA sequence:RefSeq:WP_016293395.1
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009345753.1
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: similar to AA sequence:RefSeq:WP_006307570.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005585592.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968537.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585094.1
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005582564.1
large conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_004818042.1
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005582569.1
COORDINATES: similar to AA sequence:RefSeq:WP_004819345.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588008.1
COORDINATES: protein motif:HMM:NF016119.2
COORDINATES: protein motif:HMM:TIGR00035.1
GO:0047689 - aspartate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006307607.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014477.2
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009354783.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_019117505.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01085.1
UDP-N-acetylmuramyl-tripeptide synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_005587001.1
COORDINATES: similar to AA sequence:RefSeq:WP_012803604.1
COORDINATES: similar to AA sequence:RefSeq:WP_004827019.1
COORDINATES: similar to AA sequence:RefSeq:WP_004835466.1
COORDINATES: similar to AA sequence:RefSeq:WP_012803600.1
COORDINATES: similar to AA sequence:RefSeq:WP_004837011.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967175.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: protein motif:HMM:NF024813.2
COORDINATES: protein motif:HMM:NF037527.2
COORDINATES: protein motif:HMM:NF015284.2
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_005583311.1
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: similar to AA sequence:RefSeq:WP_008901564.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: similar to AA sequence:RefSeq:WP_002837978.1
COORDINATES: similar to AA sequence:RefSeq:WP_002375139.1
COORDINATES: protein motif:HMM:NF038013.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584520.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584521.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585761.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010242590.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587441.1
COORDINATES: similar to AA sequence:RefSeq:WP_010744434.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008902666.1
COORDINATES: protein motif:HMM:NF012753.2
GO:0030234 - enzyme regulator activity [Evidence IEA]
GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF019194.2
COORDINATES: similar to AA sequence:RefSeq:WP_005585579.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585581.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585584.1
COORDINATES: protein motif:HMM:TIGR00157.1
COORDINATES: protein motif:HMM:NF001126.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_018052548.1
COORDINATES: protein motif:HMM:NF018663.2
COORDINATES: similar to AA sequence:RefSeq:WP_009525694.1
COORDINATES: protein motif:HMM:NF016143.2
COORDINATES: similar to AA sequence:RefSeq:WP_003511628.1
COORDINATES: protein motif:HMM:NF021355.2
beta-propeller domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005585956.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822115.1
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: protein motif:HMM:NF040105.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF023418.2
transglutaminase domain-containing protein
COORDINATES: protein motif:HMM:NF024093.2
COORDINATES: protein motif:HMM:NF019314.2
COORDINATES: similar to AA sequence:RefSeq:WP_002466625.1
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: protein motif:HMM:NF013345.2
COORDINATES: protein motif:HMM:NF025397.2
COORDINATES: similar to AA sequence:RefSeq:WP_009221519.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290622.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290621.1
GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:TIGR00112.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003671.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: protein motif:HMM:NF025687.2
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: similar to AA sequence:RefSeq:WP_014966389.1
COORDINATES: similar to AA sequence:RefSeq:WP_009221888.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291313.1
COORDINATES: similar to AA sequence:RefSeq:WP_009661752.1
COORDINATES: similar to AA sequence:RefSeq:WP_004814817.1
COORDINATES: similar to AA sequence:RefSeq:WP_014969040.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014969041.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967337.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017551006.1
COORDINATES: protein motif:HMM:NF012911.2
COORDINATES: protein motif:HMM:NF014448.2
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: similar to AA sequence:RefSeq:WP_008901475.1
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: protein motif:HMM:NF020917.2
GO:0043231 - intracellular membrane-bounded organelle [Evidence IEA]
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
CDGSH iron-sulfur domain-containing protein
COORDINATES: protein motif:HMM:NF020496.2
COORDINATES: protein motif:HMM:NF014899.2
class III extradiol ring-cleavage dioxygenase
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: similar to AA sequence:RefSeq:WP_006314140.1
COORDINATES: protein motif:HMM:NF015368.2
COORDINATES: protein motif:HMM:NF016296.2
LytTR family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014968173.1
COORDINATES: similar to AA sequence:RefSeq:WP_004822683.1
4-hydroxyphenylacetate 3-hydroxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003222222.1
COORDINATES: protein motif:HMM:NF014345.2
COORDINATES: protein motif:HMM:NF013717.2
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
molybdopterin dinucleotide binding domain-containing protein
COORDINATES: protein motif:HMM:NF012402.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF002806.0
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: similar to AA sequence:RefSeq:WP_012290132.1
COORDINATES: similar to AA sequence:RefSeq:WP_002349533.1
COORDINATES: protein motif:HMM:NF014273.2
ParB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012372.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024784.2
COORDINATES: similar to AA sequence:RefSeq:WP_002843662.1
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013961.2
COORDINATES: similar to AA sequence:RefSeq:WP_006314596.1
COORDINATES: protein motif:HMM:NF027478.2
COORDINATES: protein motif:HMM:NF012694.2
COORDINATES: similar to AA sequence:RefSeq:WP_014967364.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967365.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024925.2
COORDINATES: similar to AA sequence:RefSeq:WP_009431982.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004823843.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024703.2
COORDINATES: similar to AA sequence:RefSeq:WP_014967370.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967369.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF014600.2
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009354448.1
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: similar to AA sequence:RefSeq:WP_005588634.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR00974.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02138.1
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR02136.1
PstS family phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: similar to AA sequence:RefSeq:WP_014966434.1
COORDINATES: similar to AA sequence:RefSeq:WP_014966435.1
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: protein motif:HMM:NF003921.0
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: similar to AA sequence:RefSeq:WP_006313851.1
COORDINATES: protein motif:HMM:NF017819.2
COORDINATES: similar to AA sequence:RefSeq:WP_013840464.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968260.1
COORDINATES: protein motif:HMM:NF014164.2
COORDINATES: protein motif:HMM:NF000355.3
COORDINATES: similar to AA sequence:RefSeq:WP_002363483.1
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: similar to AA sequence:RefSeq:WP_005584662.1
COORDINATES: similar to AA sequence:RefSeq:WP_005584663.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_014966787.1
COORDINATES: protein motif:HMM:NF013071.2
COORDINATES: protein motif:HMM:NF014623.2
COORDINATES: similar to AA sequence:RefSeq:WP_014966363.1
COORDINATES: similar to AA sequence:RefSeq:WP_005581897.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005588166.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588167.1
YedE family putative selenium transporter
COORDINATES: similar to AA sequence:RefSeq:WP_005588168.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588169.1
COORDINATES: similar to AA sequence:RefSeq:WP_008901798.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431012.1
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002837218.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587328.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587319.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587317.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019034215.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587312.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585377.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968903.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585374.1
anaerobic nitric oxide reductase flavorubredoxin
COORDINATES: similar to AA sequence:RefSeq:WP_005585376.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585378.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585379.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006317613.1
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - cellular manganese ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290025.1
COORDINATES: similar to AA sequence:RefSeq:WP_004827811.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585588.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004832534.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_009447912.1
COORDINATES: similar to AA sequence:RefSeq:WP_014969027.1
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014969029.1
COORDINATES: similar to AA sequence:RefSeq:WP_005586329.1
COORDINATES: similar to AA sequence:RefSeq:WP_014969031.1
COORDINATES: similar to AA sequence:RefSeq:WP_014969032.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005586333.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_005586335.1
COORDINATES: similar to AA sequence:RefSeq:WP_002841630.1
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_014969036.1
COORDINATES: similar to AA sequence:RefSeq:WP_014969038.1
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005586339.1
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019117058.1
COORDINATES: similar to AA sequence:RefSeq:WP_006317170.1
COORDINATES: protein motif:HMM:NF013866.2
YqiA/YcfP family alpha/beta fold hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_016181840.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00492.1
COORDINATES: protein motif:HMM:TIGR03915.1
TIGR03915 family putative DNA repair protein
COORDINATES: similar to AA sequence:RefSeq:WP_009221736.1
putative DNA modification/repair radical SAM protein
COORDINATES: protein motif:HMM:NF014443.2
COORDINATES: similar to AA sequence:RefSeq:WP_009221803.1
COORDINATES: protein motif:HMM:NF036294.2
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005587830.1
COORDINATES: protein motif:HMM:NF015683.2
glutathionylspermidine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005586344.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA]
glutamate-cysteine ligase family protein
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_002838820.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005585605.1
COORDINATES: similar to AA sequence:RefSeq:WP_009448096.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585603.1
COORDINATES: protein motif:HMM:NF021520.2
COORDINATES: protein motif:HMM:NF014471.2
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005585602.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968010.1
COORDINATES: protein motif:HMM:NF019244.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587876.1
COORDINATES: protein motif:HMM:TIGR00181.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431436.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583834.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582876.1
COORDINATES: similar to AA sequence:RefSeq:WP_004833166.1
COORDINATES: similar to AA sequence:RefSeq:WP_005582881.1
COORDINATES: protein motif:HMM:TIGR00092.1
COORDINATES: similar to AA sequence:RefSeq:WP_014966308.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585916.1
GO:0140737 - encapsulin nanocompartment [Evidence IEA]
family 1 encapsulin nanocompartment shell protein
COORDINATES: similar to AA sequence:RefSeq:WP_005585917.1
COORDINATES: similar to AA sequence:RefSeq:WP_006312387.1
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: protein motif:HMM:NF038196.1
N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024197.2
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: similar to AA sequence:RefSeq:WP_016398125.1
COORDINATES: similar to AA sequence:RefSeq:WP_041250629.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_002835034.1
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005584758.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006314403.1
COORDINATES: protein motif:HMM:NF021186.2
two-component system regulatory protein YycI
COORDINATES: similar to AA sequence:RefSeq:WP_009221663.1
COORDINATES: similar to AA sequence:RefSeq:WP_005583827.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010245014.1
LysM peptidoglycan-binding domain-containing M23 family metallopeptidase
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: protein motif:HMM:NF025935.2
COORDINATES: similar to AA sequence:RefSeq:WP_005587182.1
COORDINATES: protein motif:HMM:NF016825.2
COORDINATES: protein motif:HMM:TIGR00654.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587173.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_005587172.1
COORDINATES: similar to AA sequence:RefSeq:WP_005587167.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_005955089.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_012291241.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_005587161.1
GO:0051510 - regulation of unidimensional cell growth [Evidence IEA]
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: similar to AA sequence:RefSeq:WP_005587159.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: similar to AA sequence:RefSeq:WP_009355122.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_005587157.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004823743.1