Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-1, complete sequence.
type: Entry
definition: Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-1, complete sequence.
sequence version: NZ_AP019824.1
sequence date: 2022-12-27
sequence: sequence
division: CON
label: NZ_AP019824.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00156223
keyword: RefSeq
source: Leptotrichia hofstadii
organism: Leptotrichia hofstadii
taxonomy: Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Leptotrichiaceae; Leptotrichia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP019824.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 1.8; Circlator v. 1.5.5;\n nanopolish v. 0.10.2; Pilon v. 1.22; CLC\n Genomics Workbench v. 9.5.3\nGenome Coverage :: 47X\nSequencing Technology :: MinION; MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/27/2022 02:39:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,546\nCDSs (total) :: 2,480\nGenes (coding) :: 2,464\nCDSs (with protein) :: 2,464\nGenes (RNA) :: 66\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 4\nPseudo Genes (total) :: 16\nCDSs (without protein) :: 16\nPseudo Genes (ambiguous residues) :: 0 of 16\nPseudo Genes (frameshifted) :: 7 of 16\nPseudo Genes (incomplete) :: 10 of 16\nPseudo Genes (internal stop) :: 4 of 16\nPseudo Genes (multiple problems) :: 4 of 16\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 34135
topology: circular
so has quality: SO_0000988
location: 1..34135
location: region:1-34135:1
RO_0002162: 157688

NZ_AP019824
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00156223
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequence of Leptotrichia hofstadii Strain JCM16775
author: Watanabe, S.
author: Cui, L.
journal: Unpublished

2
title: Direct Submission
author: Watanabe, S.
author: Cui, L.
journal: Submitted (23-JUL-2019) Contact:Shinya Watanabe Jichi Medical University, Bacteriology; Yakushiji 3311-1, Shimotsuke, Tochigi 329-0498, Japan URL :http://www.jichi.ac.jp/bacteriology/

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34135:1
position: 34135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-34135:1:source
so part of: sequence
organism: Leptotrichia hofstadii
mol type: genomic DNA
strain: JCM16775
isolation source: Saliva of a healthy person
type material: type strain of Leptotrichia hofstadii
plasmid: pJCM16775-1
country: Norway
note: strain coidentity: JCM16775 = CCUG 47504 = LB 23 = CIP 107917 = DSM 21651

157688
type: Taxonomy
SIO_000068: taxonomy

FVE77_RS12125
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12125
old locus tag: JCM16775_p1001
so part of: sequence
location: 359..1831
location: region:359-1831:1
so has part: feature:359-1831:1:exon
subclass of: SO_0000010

position:359:1
position: 359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831:1
position: 1831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359-1831:1:exon

FVE77_RS12125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12125
old locus tag: JCM16775_p1001
inference: COORDINATES: protein motif:HMM:NF015737.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autotransporter outer membrane beta-barrel domain-containing protein
translation: MKKRLLLGIVLLGINSFSKMTITSYNNGSSVSNGSLTEAGHNFSGIVQFLGNQGGTYVIKLDSGTKIETGTRFDLDPNTTITIEGANGTIGTIVNGSSAYPVGAPVSTKHYYFWQDLDENSATLPESGVLNGNLYTPSVISRSNNASTAITHVTTNVLPPNTASTTTPGISTPTPSTPSTGTTPITGNVAPSNKRKKVLVIPRSRVDLDLVENAKMTMIKNVEKKIEKGEWDLNIEYVGGVGTKYTDKTHDTLQYNGKSNGVILSLNKNYDKLTLGGLFGYQNSKVKYKDFYNGIKEKIDSYQFLLNAKYDFNEKFDLIGTLVYSTNKHKFDGSNIISYNWINDAEYTSNIFDIETRLGYKYLFTNGYIKPYLGIGVLNLKEGAINKIGAKKTSETALNSVLGIYGVAELNKIDLYGNVEYRQKYGKNSYHNKRDVDLTTKIDALNYKKTTVNANIGLRYKITDMFDINTSYGLNNLKNNIIKIGIGIQY
SIO_010081: FVE77_RS12125
subclass of: SO_0000673
so part of: FVE77_RS12125
location: 359..1831
location: region:359-1831:1
so has part: feature:359-1831:1:exon

WP_026745101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359-1831:1:exon

FVE77_RS12130
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12130
old locus tag: JCM16775_p1002
so part of: sequence
location: 1992..3800
location: region:1992-3800:1
so has part: feature:1992-3800:1:exon
subclass of: SO_0000010

position:1992:1
position: 1992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3800:1
position: 3800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1992-3800:1:exon

FVE77_RS12130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12130
old locus tag: JCM16775_p1002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006806156.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ShlB/FhaC/HecB family hemolysin secretion/activation protein
translation: MGYKKIIIFGTFLLTNLAFSAPVNEANRIIDIQQRQLEQERVRQRQEKMQKEFENTKFDNSQIQINNEIENDNNNSNKFLIEIINLKDDNKLLSKKEKSKIIKKYLYSELSSNDIRNLLTDITNKLISKGYTTSSVALDENNDLTTGILNLDIIAGKIEDIKINSNNKLDRYKQFFMFPVNKEKIFNIRDIDTATDNFNSINANSMTMEVLPGTKENHSRIQVKNTLKNKYTVGILANNYGDSRQNGIWRRGVHLNIDSPLGIGDNFYFTYMTVPKKNPNRDWKKPVEQLEPGEILPIGPAGYNPANGDTLPYKRRLDMFNFGYTMKFRTYTLKLNSSKSIQESSFYSANTVYDMYSGSHTLSADLEKILFRNQKSKVTLDLGIKRKHNQSYLEKSALSDRKLAIGTLSLNATTSLFGGIFGSSFGYERGLKIFHAERDSGKIDTTPKAQFHKYSMNLSYYKPITNKLVYRANISGSYSNDVLYGSERQTIGGVGSVGGYHTRESIQGDKAIEVSNEIAYSIPVKKFAVVSPYVNYGYGAAKYNRDKSKYRTGYVTGMTAGIRLDTKIFDFDFGYARPMSHSDYLSPKKQEMYFSGSLKVSF
SIO_010081: FVE77_RS12130
subclass of: SO_0000673
so part of: FVE77_RS12130
location: 1992..3800
location: region:1992-3800:1
so has part: feature:1992-3800:1:exon

WP_026745100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1992-3800:1:exon

FVE77_RS12135
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12135
old locus tag: JCM16775_p1003
so part of: sequence
location: 3874..13422
location: region:3874-13422:1
so has part: feature:3874-13422:1:exon
subclass of: SO_0000010

position:3874:1
position: 3874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13422:1
position: 13422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3874-13422:1:exon

FVE77_RS12135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12135
old locus tag: JCM16775_p1003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006806157.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: filamentous hemagglutinin N-terminal domain-containing protein
translation: MKEKSKILRKLTAALLLNVFSFNILADGLQVDPNSRYNTSLDRAQNGVPVVNISTPNGRGVSINEFLEYNVGREGQVLNNADNIGRSHLAGIINANPNLGPNQAANLVLLQVNGANRSQIEGYIEALSRQKVNVVLSNENGIYLNGAGTINIKNFIPTTGKVKLKDGDVIGIDVEKGRVIIGANGFDATNTDYVNVIAKAMELQGNLVGSKVDVTLGENTVDSSGTVTSKNGINSVAIDASNLGSMYAGQIKIVSTDKGAGVNSNGLIYSRDTKLEITADGKINVAKIKGNGIEINGTEYAQSELASSDKGININAAKIKLDGETQANEDINLNGNVENKSNIYTGGNLNTLDMINSGNINASGNITAKDFKNSLAAVLSGGSFNVRNLDNSGNIQVSGITDINGKFDNTGALTSVRRISVSGNIGSTGNILTNEDLTAKNTVTSGAIAAKNLRVDNLTNDGKISANGELIAKDVKNTGDILASGRISGSSLVTSGKVQTNETLDIDGLLDNSGTVGASKDITVADNVLNSGEILTNGDFASKNMDTSGTVVSNNLRTGNLKNDGKIVANKDLTAKKVESAGDITVVGKIMADSLKSSGSLRTNEALDINGDFGNDGTIETPKDVTVAGDISNTGKIIAGGNLSGRNAVSAGVIASRNINVDDLKNDGKVTAGENITAKKVTNTGDIAAAGTVSSDDMSTSGTVKANKTVTVAGKLENDGTVETAEDVKVSGNIRNTGRIALNGDLTGKDTVTSGTIASRNVKVDNLSNDGVIVANENLNAKNVSNTGDIVAVGTVSSDDLVTSGNVRSNGKITVSGKLENSGAVETAKNISVAGNIRNDGKIAANEDLTGKNAENNGNIYVKNLEVNNLKNTGKVEGVDLKTDDITNSGDITAIGKISGGNIDNSGKLLANDTIDAKNIKNATTSSKIAAGKGITGERIENSGTFATNGNIKAASSLVNSGTVDGKGIDVAGSEFTNSGKINGENIKANVSSTKNDGFIYSGNDVDLATNTLTNTKEIMAVSNINAANAIVSNSGKIASNNRVLLDGSAIANTGEILSGEIFMRNARKFDNAGTIRGNNVELGVNQDINLAGNLHGQQRLVISGNNITNNGNTTGTGLIEINSNDFTNNKELASDTVIVNGRGEIVNNNMITGNNGKISGRNITNNDLIAFENYLEMNAQGKVQNNKEKAIYGGKALVIKANEIMNDEAEILGGNMDLNAAKITNNVATIQSTGDIVITSSDFQNIGRVKGLGNYEKYFETWDGLKITEQEIRNEWAIHDGYDWGHGKYKDAIDDQKVEFEKFVTKNRNSRFKSYLLTKHEDFFRSILGKDLGYGDEFKTGTAQFPAEELRERLKSNADTEYGKVLAGGNITVNSGNFKNKDSIVSGGGLVNVNATNFENSVTIDASNPIRLRKGYEYLELNVEERGHGYDMTAFHDRQIDTRNFLTGYAAGQPAVIEGAAVRINAPNIIRSPFEDANGEELENGGATGRELISSNSIGIKKGTGSVNGAVQVAGNASLSKLTGSFSGNSQVNGSPNLNSQVSGTFDNVVEIEGNNAGIKDIKSTGVISVNPILASAMFKANMNPSSKYVMETRSSYINLSDYYGSDYFLERVGYSEVWDRARRLGDAYYENQLLTRSIAEKLGTAFINGKSNKKLIQAMMDNASAEGKRLGLKAGQELTQEQINSLNEDIIWYVTKNVNGIEVLAPQVYLSKNTRSSISDDTRNRVGGIDGTYVKTNDFVNSGTKWGNGGVTYVEANTVRNETTTNLLSEISGDQTYINAVGNIENIGGRIKGNEVVALISENGKVVNDTTKRRIGYDNGRYDSSWHDEAASLGEISSNGTTYIKANEYTTTGGVLSTKNMIWDVNSLNANALKLSGEDRNGVNSDNYGRYSQTTHLGAGIVADTTTGRIGDMNLVGSTFAGGDTNGLTISGNVNVESVVNSYENESKRTNKGFLSSDSRYVNAHEEENVAGNLQLNGARIEGNLTGTGSNIVLGENT…
SIO_010081: FVE77_RS12135
subclass of: SO_0000673
so part of: FVE77_RS12135
location: 3874..13422
location: region:3874-13422:1
so has part: feature:3874-13422:1:exon

WP_232052993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3874-13422:1:exon

FVE77_RS12140
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12140
old locus tag: JCM16775_p1004
so part of: sequence
location: 13436..14113
location: region:13436-14113:1
so has part: feature:13436-14113:1:exon
subclass of: SO_0000010

position:13436:1
position: 13436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14113:1
position: 14113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13436-14113:1:exon

FVE77_RS12140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12140
old locus tag: JCM16775_p1004
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEELSTKEYNELYKKYFKEIFNKPMKDFGYRKKGIGRFCKLNKIGLFEYIGFFRYYHELRIEYAIIPIYSYIMKDSIGNGAKTEFVDLDGEEKMEKGMKSILEEIKNKIIPWFKKYEDLDAFFEEIVGNDKLYIGAEIYRYLFRAATFAKFKKYSKIQENIDKVREEYNKYSKRYDFYNDILKEAVTLEEKLKEGEESVEKYIEEMEYKSLLDWKMEKLLKNKVK
SIO_010081: FVE77_RS12140
subclass of: SO_0000673
so part of: FVE77_RS12140
location: 13436..14113
location: region:13436-14113:1
so has part: feature:13436-14113:1:exon

WP_146967971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13436-14113:1:exon

FVE77_RS12145
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12145
old locus tag: JCM16775_p1005
so part of: sequence
location: 14514..15434
location: region:14514-15434:1
so has part: feature:14514-15434:1:exon
subclass of: SO_0000010

position:14514:1
position: 14514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15434:1
position: 15434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14514-15434:1:exon

FVE77_RS12145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12145
old locus tag: JCM16775_p1005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018450725.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MNEVVKYNNNFNNISLRNFNANELDILMAICSRTKEKGEEEITFHFDKLKKLINYSDNTSATFVKDLESTYDKLISIKLKVGDERRFIKFVLFTRYSVDVDEKTVEIAVNKEFAWVLNELNVTFTAFELKEFISLKSSYAKEFYRRMKQFKSTGKWNISLEDFKRIMDVPVNYRMCDIDVWVLKPIQKELKEKYGLKIQKTYNTKGRGRPAVSGFIFTFLKEEPQSREIKEEKKEIRTPADFFIHRKVRMMDGVTGMFNTLTIKSINEQKNGMVVVKIQNIDDFYEQDFAFNSMEHFENWFRKYVI
SIO_010081: FVE77_RS12145
subclass of: SO_0000673
so part of: FVE77_RS12145
location: 14514..15434
location: region:14514-15434:1
so has part: feature:14514-15434:1:exon

WP_036087326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14514-15434:1:exon

FVE77_RS12150
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12150
old locus tag: JCM16775_p1006
so part of: sequence
location: complement(15568..15840)
location: region:15568-15840:-1
so has part: feature:15568-15840:-1:exon
subclass of: SO_0000010

position:15568:-1
position: 15568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15840:-1
position: 15840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15568-15840:-1:exon

FVE77_RS12150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12150
old locus tag: JCM16775_p1006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018499565.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MGRTVKYKIIPTPHFVKDFSKLDEFVKKRIKIYLENIAEDPRSKGKMLKANRKGQWRYRIGDYRVIVNIQDENLVVLALEVGHRKNIYNS
SIO_010081: FVE77_RS12150
subclass of: SO_0000673
so part of: FVE77_RS12150
location: complement(15568..15840)
location: region:15568-15840:-1
so has part: feature:15568-15840:-1:exon

WP_021745737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15568-15840:-1:exon

FVE77_RS12155
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12155
old locus tag: JCM16775_p1007
so part of: sequence
location: complement(15825..16040)
location: region:15825-16040:-1
so has part: feature:15825-16040:-1:exon
subclass of: SO_0000010

position:15825:-1
position: 15825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16040:-1
position: 16040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15825-16040:-1:exon

FVE77_RS12155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12155
old locus tag: JCM16775_p1007
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006806162.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6290 family protein
translation: MASISLKVSDMEKKFLQSMAQFEGVTLSELIKSKVFDSLEDEYDAKIADLRLSEYESYLKNGGEVLKWEEL
SIO_010081: FVE77_RS12155
subclass of: SO_0000673
so part of: FVE77_RS12155
location: complement(15825..16040)
location: region:15825-16040:-1
so has part: feature:15825-16040:-1:exon

WP_006806162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15825-16040:-1:exon

FVE77_RS12725
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12725
old locus tag: JCM16775_p1008
so part of: sequence
location: complement(17262..17450)
location: region:17262-17450:-1
so has part: feature:17262-17450:-1:exon
subclass of: SO_0000010

position:17262:-1
position: 17262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17450:-1
position: 17450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17262-17450:-1:exon

FVE77_RS12725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12725
old locus tag: JCM16775_p1008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006806164.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGISIMTDEFFEDENVDDEENNLEYDRDIFDIEIEFDDEVVKRIERTETAREFEKLIENEE
SIO_010081: FVE77_RS12725
subclass of: SO_0000673
so part of: FVE77_RS12725
location: complement(17262..17450)
location: region:17262-17450:-1
so has part: feature:17262-17450:-1:exon

WP_172966428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17262-17450:-1:exon

FVE77_RS12160
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12160
old locus tag: JCM16775_p1009
so part of: sequence
location: complement(17635..18138)
location: region:17635-18138:-1
so has part: feature:17635-18138:-1:exon
subclass of: SO_0000010

position:17635:-1
position: 17635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18138:-1
position: 18138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17635-18138:-1:exon

FVE77_RS12160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12160
old locus tag: JCM16775_p1009
inference: COORDINATES: protein motif:HMM:NF014505.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MEKFGRKFKREKRKIKKFLNARDFELLLKYFINLIKNNLRILKNPAIETTANARRSYVYSVDFGFTTGGVLRDRHYCVVLYSQGKTSIVVPLTSKNNTNIFNVELGIIQNLSRRNIVSYALVNQITTVSRAMLMQPRRNRNERVKLNSEQMNKLEQGLEKILFKNRY
SIO_010081: FVE77_RS12160
subclass of: SO_0000673
so part of: FVE77_RS12160
location: complement(17635..18138)
location: region:17635-18138:-1
so has part: feature:17635-18138:-1:exon

WP_026745118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17635-18138:-1:exon

FVE77_RS12165
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12165
old locus tag: JCM16775_p1010
so part of: sequence
location: complement(18247..18912)
location: region:18247-18912:-1
so has part: feature:18247-18912:-1:exon
subclass of: SO_0000010

position:18247:-1
position: 18247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18912:-1
position: 18912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18247-18912:-1:exon

FVE77_RS12165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12165
old locus tag: JCM16775_p1010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008699936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MRYGYARVSTREQDEARQIKALKNKGVQEIIIEKASGKNFIDRQEWQKLMAKVVVDDVIVVKSLDRLGRNNAEIKETFELLSKKQVYLEFIDNDILNTRKPITETDKLNQKLVQPIILHLLGYFAERERELIRERQTEAYVQLEVDSKGRKLSNKKVNKDGSKKICGRPNKVENLTKKQKDIINRWILKAIKTSEAVQLTGLSRSTLFRIKKTFCEQENIL
SIO_010081: FVE77_RS12165
subclass of: SO_0000673
so part of: FVE77_RS12165
location: complement(18247..18912)
location: region:18247-18912:-1
so has part: feature:18247-18912:-1:exon

WP_026745119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18247-18912:-1:exon

FVE77_RS12520
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12520
old locus tag: JCM16775_p1011
so part of: sequence
location: 19208..19378
location: region:19208-19378:1
so has part: feature:19208-19378:1:exon
subclass of: SO_0000010

position:19208:1
position: 19208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19378:1
position: 19378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19208-19378:1:exon

FVE77_RS12520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12520
old locus tag: JCM16775_p1011
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYKVIEEKDDKGKVWYVVDGERFSNRESAQRKADKLNELAHQRGLISNKSNSQGRI
SIO_010081: FVE77_RS12520
subclass of: SO_0000673
so part of: FVE77_RS12520
location: 19208..19378
location: region:19208-19378:1
so has part: feature:19208-19378:1:exon

WP_154669765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19208-19378:1:exon

FVE77_RS12170
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12170
old locus tag: JCM16775_p1012
so part of: sequence
location: complement(19480..21336)
location: region:19480-21336:-1
so has part: feature:19480-21336:-1:exon
subclass of: SO_0000010

position:19480:-1
position: 19480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21336:-1
position: 21336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19480-21336:-1:exon

FVE77_RS12170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12170
old locus tag: JCM16775_p1012
inference: COORDINATES: protein motif:HMM:NF013258.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid recombination protein
translation: MDLTYMLSLEKWEQYYKENLEFLSKKFGKNAHCVYAVIHFDESTPHMQSMWTFSEENNQKDEYTVSDVNTAKVKSALTSAFLRRNKELGLIAGTDEYKKAFEEFKVQEKPKIIERQLAKLNKNKSDKKFKFESGTSPFTKDFYRTFNEEFVNDFMVKNPSINELKNKVKVFSNEGAEVVVRRTEKVNSSEDLDRTKFAMEKEKKDLENKIGSNDYSKNEFMKYMEILSKREIIDRKKKISKEDFLNEFKNCETDFKVRKSNKEITDFKRIFNIKKIIKDKLNQRQNNKNFKKNLKKEIKLFDKVFKNVDFEAINKKIEDYSKGEKVEELIKNRENLYFEIKTLETEASNLKSSINFLEKEQNSKNNEIRNLDDQIWEKKIEAEKPYVVSERRKQELINEALNEARKRGDTLMRNIKKDVEKEEAKNNAIKQDILDKRLEMERELQEINNKRRQLNDSYADLEEKKRRRKAELEKLAQPIIQKEVDDLVREHLRYYEVTDKDILNFKANNKLEYDKLFGEAEARADEKIKGAYIRRKHDAGNKFIKQMTNMLHEDANGKFSLLEIEKTVIVAIENVPDNTYGWWDDFKNNLNIELENTVRERNTVRNQNKNKSQYHRSR
SIO_010081: FVE77_RS12170
subclass of: SO_0000673
so part of: FVE77_RS12170
location: complement(19480..21336)
location: region:19480-21336:-1
so has part: feature:19480-21336:-1:exon

WP_146967973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19480-21336:-1:exon

FVE77_RS12175
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12175
old locus tag: JCM16775_p1013
so part of: sequence
location: complement(21327..21578)
location: region:21327-21578:-1
so has part: feature:21327-21578:-1:exon
subclass of: SO_0000010

position:21327:-1
position: 21327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21578:-1
position: 21578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21327-21578:-1:exon

FVE77_RS12175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12175
old locus tag: JCM16775_p1013
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEISAINNFKKYNSKSGRSSINNVVREAFRELEKFKNNVNQELTQFNKILVKDLSVLERQYYDTEVDSRSRQEILKQEMEWI
SIO_010081: FVE77_RS12175
subclass of: SO_0000673
so part of: FVE77_RS12175
location: complement(21327..21578)
location: region:21327-21578:-1
so has part: feature:21327-21578:-1:exon

WP_146967975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21327-21578:-1:exon

FVE77_RS12185
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12185
old locus tag: JCM16775_p1014
so part of: sequence
location: 22102..22893
location: region:22102-22893:1
so has part: feature:22102-22893:1:exon
subclass of: SO_0000010

position:22102:1
position: 22102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22893:1
position: 22893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22102-22893:1:exon

FVE77_RS12185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12185
old locus tag: JCM16775_p1014
inference: COORDINATES: protein motif:HMM:NF025001.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKVISIVNPKGGAGKTVTAVNLAYAMSLKGKKILLIDTDPRNAVSTYLNLKNDNTIFDLIKECYETMKFDKAKYITSKNKVDVIISDERLLQLEMLFASYSDNQAIFNIFSNITEQLKQDYDYIIIDTEGSINNTVRGILNATDYIVAPSKCSLIDTNGINDLIKIYFIGKRNNPKLELKKVFFVQVEERTKVFADALKEFTDFFNSNGLGLNSNILSKNYVRKDSNINNAMLENLDIINYKKSSPSSTDYRNIANDLIKELE
SIO_010081: FVE77_RS12185
subclass of: SO_0000673
so part of: FVE77_RS12185
location: 22102..22893
location: region:22102-22893:1
so has part: feature:22102-22893:1:exon

WP_026745112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22102-22893:1:exon

FVE77_RS12190
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12190
old locus tag: JCM16775_p1015
so part of: sequence
location: 22957..23544
location: region:22957-23544:1
so has part: feature:22957-23544:1:exon
subclass of: SO_0000010

position:22957:1
position: 22957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23544:1
position: 23544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22957-23544:1:exon

FVE77_RS12190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12190
old locus tag: JCM16775_p1015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRFDSLKKIDELTIESIKQYESNFDFSAYEITDDNFISEIRSIENNLYMAWNLIQNRTKEMCKYLYEAQEKFKTQKDGSFMAWYKSMGLSKDQVSFSIMKYKQYLEYGENPMALESSKRTVKYINQNSENLSDEKIEEILNNPKEAPNIIKELKSKVEIDYAKRLEEINKEIKKFQRKIRQLKTEKMEIKSQLQ
SIO_010081: FVE77_RS12190
subclass of: SO_0000673
so part of: FVE77_RS12190
location: 22957..23544
location: region:22957-23544:1
so has part: feature:22957-23544:1:exon

WP_036087315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22957-23544:1:exon

FVE77_RS12195
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12195
old locus tag: JCM16775_p1016
so part of: sequence
location: complement(23644..24720)
location: region:23644-24720:-1
so has part: feature:23644-24720:-1:exon
subclass of: SO_0000010

position:23644:-1
position: 23644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24720:-1
position: 24720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23644-24720:-1:exon

FVE77_RS12195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12195
old locus tag: JCM16775_p1016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018450717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MKNKIVKYDNDFNTVGLRGFTAEELDLLMTILHRVRNREIEEIKFSYYELKQLIKSEKKPTIEQFSKSIMNINKKLLALNFALVENDEIIQFALFKEFRTSPKKQILTVSVSERFKFLLNDFDPGKWTRFELEEFVDLKSSYTKEFYRRMKQFRSTGFWKCGIEEFRNLLDIPEKYRITDIDAWVLKPIQKELGEKYNLKIEKKYGFSGGRGRSRVTGFEFKFSTEKKVDIVAGNEEEDNPNPLSKPRKQKKKEEIKVVPEIKSKIIEAIPKQEKEKTLREKIKAKLEDNNMEIVKLKAMYEGLKGNVQLKKMTDQYPGKIQKIKDINMQLEAIFEADEENLTQEIIKLAEELLVSKV
SIO_010081: FVE77_RS12195
subclass of: SO_0000673
so part of: FVE77_RS12195
location: complement(23644..24720)
location: region:23644-24720:-1
so has part: feature:23644-24720:-1:exon

WP_026745113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23644-24720:-1:exon

FVE77_RS12915
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12915
pseudo: true
so part of: sequence
location: complement(25182..>25359)
location: region:25182-25359:-1
so has part: feature:25182-25359:-1:exon
subclass of: SO_0000010

position:25182:-1
position: 25182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25359:-1
position: 25359
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25182-25359:-1:exon

FVE77_RS12915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007595830.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cell filamentation protein Fic
SIO_010081: FVE77_RS12915
subclass of: SO_0000673
so part of: FVE77_RS12915
location: complement(25182..>25359)
location: region:25182-25359:-1
so has part: feature:25182-25359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25182-25359:-1:exon

FVE77_RS12205
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12205
old locus tag: JCM16775_p1017
so part of: sequence
location: complement(25583..26890)
location: region:25583-26890:-1
so has part: feature:25583-26890:-1:exon
subclass of: SO_0000010

position:25583:-1
position: 25583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26890:-1
position: 26890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25583-26890:-1:exon

FVE77_RS12205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12205
old locus tag: JCM16775_p1017
inference: COORDINATES: protein motif:HMM:NF019371.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Abi family protein
translation: MSRPFHTYEEQLEKLKSRRLIIDNDEEVIKILKRKNYYDIINGYKDYFIDIPATTASGDDVYKEGTNFKDIDLLYEFDAEIRSIILKNILKLENIIKTKISYVFSKEKTQEFNYLNINNYDETKKENATRVIAEISNVIRNCMSQNYTGGRQISHYLDIHRNLPLWVLAKQLTFGNISYFYSSIEESLQKEICEEIAIEYKKEYDKTIIVDEKNMEKILRFINSIRNICAHNERLYNITVRINRNRIHRITHPHIDFTFRSKLFDVLIILKLFITRKEFQILAKEISNEIKKLGSNYSTKVFGDILNQTGIPIKWKRIIGDLLEWEEIDSKEENEKIEKFIYIKHGDEIDSLATISKIEEIYLKQEKDLTLKIAYGMKLIGYVFKLNMKKVTIENKKITEEDKDYIEILYEEKEVDKFEEENNFKGEIIKILNKK
SIO_010081: FVE77_RS12205
subclass of: SO_0000673
so part of: FVE77_RS12205
location: complement(25583..26890)
location: region:25583-26890:-1
so has part: feature:25583-26890:-1:exon

WP_051254429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25583-26890:-1:exon

FVE77_RS12210
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12210
old locus tag: JCM16775_p1018
so part of: sequence
location: complement(27231..27503)
location: region:27231-27503:-1
so has part: feature:27231-27503:-1:exon
subclass of: SO_0000010

position:27231:-1
position: 27231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27503:-1
position: 27503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27231-27503:-1:exon

FVE77_RS12210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12210
old locus tag: JCM16775_p1018
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKKKTVTDHILEANRSIMAAQEELRKEVEKQGKIIDSHSKEIAELQDKVIEMRDNAIVLELRHLPGKAVAEKYNLTPGRISQIKKEKKN
SIO_010081: FVE77_RS12210
subclass of: SO_0000673
so part of: FVE77_RS12210
location: complement(27231..27503)
location: region:27231-27503:-1
so has part: feature:27231-27503:-1:exon

WP_026745114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27231-27503:-1:exon

FVE77_RS12730
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12730
so part of: sequence
location: complement(27551..27697)
location: region:27551-27697:-1
so has part: feature:27551-27697:-1:exon
subclass of: SO_0000010

position:27551:-1
position: 27551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27697:-1
position: 27697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27551-27697:-1:exon

FVE77_RS12730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIEKIGIDRNSANIAIRKYKLYLETENSIEKLKKNRNIKKLAILKNV
SIO_010081: FVE77_RS12730
subclass of: SO_0000673
so part of: FVE77_RS12730
location: complement(27551..27697)
location: region:27551-27697:-1
so has part: feature:27551-27697:-1:exon

WP_172966429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27551-27697:-1:exon

FVE77_RS12215
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12215
old locus tag: JCM16775_p1019
so part of: sequence
location: 27762..28139
location: region:27762-28139:1
so has part: feature:27762-28139:1:exon
subclass of: SO_0000010

position:27762:1
position: 27762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28139:1
position: 28139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27762-28139:1:exon

FVE77_RS12215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12215
old locus tag: JCM16775_p1019
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIYCIDFSHETATYLQGLSTRMPLIYVMTVPFGDNVSRVKSTRDNIIFKYNKKDYYNIGRTSITNPFGRKIFSYDKKRTILDIIKNKNRVDADVFSEAMKLCFRDNDRDLLKMSKYVIYMNMEE
SIO_010081: FVE77_RS12215
subclass of: SO_0000673
so part of: FVE77_RS12215
location: 27762..28139
location: region:27762-28139:1
so has part: feature:27762-28139:1:exon

WP_211225355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27762-28139:1:exon

FVE77_RS12220
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12220
old locus tag: JCM16775_p1020
so part of: sequence
location: complement(28263..30119)
location: region:28263-30119:-1
so has part: feature:28263-30119:-1:exon
subclass of: SO_0000010

position:28263:-1
position: 28263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30119:-1
position: 30119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28263-30119:-1:exon

FVE77_RS12220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12220
old locus tag: JCM16775_p1020
inference: COORDINATES: protein motif:HMM:NF013258.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid recombination protein
translation: MDLTYMLSLEKWEQYYKENLEFLSKKFGKNARCVYAVIHFDESTPHLQSMWTFSEENNQKDEYTVSDVNTAKVKSALTSAFLRRNKELGLIAGTDEYKKAFEEFKIQEKPQIIERQLAKLNKNKSDKKFKFESGTSPFTKDFYRTFNEEFVNDFMVKNPSINELKNKVKVFSNEGAEVVVRRTEKVNSSEDLDRTKFAMEKEKKELESKIGSNDYSKNEFMKYTEILSKREIIDKKKKISKEDFLNEFKNYETDFKVRKSNKEITDFKRIFNIKKIIKDKLNQRQNNKNFKKNLKKEIKLFDEVFKNVDFEAINKKIEDYSKGEKVEELIKNRDNLYFEIKTLETKASNLKSSINFLEKEQNSKNNEIRNLDEQIWEKKMEAEKPYVVSERRKQELINEALNEARKRGDTLMRNIKKDVEKEEAKNNAIKQDILDKGLQMERELQEINNKRRRLNDIYVDLEEKKRRRKAELEKLAQPIIQKEVDNLVREHLRYYEVTDKDILNFKANNKFEYDKLFGEAEARAYEKIKGAYIRRKHDAGNKFIKQITNMLHEDTNVKLSLLEIEKTVIAAIENVPNNTYGWWDDFKNNLNIELENNLKIGILHAIELILNMAEDYNI
SIO_010081: FVE77_RS12220
subclass of: SO_0000673
so part of: FVE77_RS12220
location: complement(28263..30119)
location: region:28263-30119:-1
so has part: feature:28263-30119:-1:exon

WP_146967977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28263-30119:-1:exon

FVE77_RS12225
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12225
old locus tag: JCM16775_p1021
so part of: sequence
location: complement(30110..30361)
location: region:30110-30361:-1
so has part: feature:30110-30361:-1:exon
subclass of: SO_0000010

position:30110:-1
position: 30110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30361:-1
position: 30361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30110-30361:-1:exon

FVE77_RS12225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12225
old locus tag: JCM16775_p1021
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEISAINNFKKYNSKSGRSSINNVVREAFRELEKFKNNVNQELTQFNKILVKDLSVLERQYYDTEVDSRSRQEILKQEMEWI
SIO_010081: FVE77_RS12225
subclass of: SO_0000673
so part of: FVE77_RS12225
location: complement(30110..30361)
location: region:30110-30361:-1
so has part: feature:30110-30361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30110-30361:-1:exon

FVE77_RS12235
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12235
old locus tag: JCM16775_p1022
so part of: sequence
location: complement(30826..31458)
location: region:30826-31458:-1
so has part: feature:30826-31458:-1:exon
subclass of: SO_0000010

position:30826:-1
position: 30826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31458:-1
position: 31458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30826-31458:-1:exon

FVE77_RS12235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12235
old locus tag: JCM16775_p1022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006806170.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKKFNLDLSKINSKKVPAVAKVESIYDINYEELDISGIEKEKLIKYENDITFHKEKSMEHIFKYSKAIFEANQIFANKGNGFFGKWIEKLGVDRDSANVAIRKYSLYLKYQTKGLEEPEKVLTLSNRTVKTLTGQKKDDFKETEIIEVITSDNPTSKLKEIEEQKEAIKLSDVEEKRIFLTREKVKRQHLIKKIREEIRDIEEKIKSLN
SIO_010081: FVE77_RS12235
subclass of: SO_0000673
so part of: FVE77_RS12235
location: complement(30826..31458)
location: region:30826-31458:-1
so has part: feature:30826-31458:-1:exon

WP_026745125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30826-31458:-1:exon

FVE77_RS12240
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12240
old locus tag: JCM16775_p1023
so part of: sequence
location: complement(31455..32195)
location: region:31455-32195:-1
so has part: feature:31455-32195:-1:exon
subclass of: SO_0000010

position:31455:-1
position: 31455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32195:-1
position: 32195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31455-32195:-1:exon

FVE77_RS12240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12240
old locus tag: JCM16775_p1023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018450716.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKKISIVNNKGGCGKTTTVFNLAHYFAKQGLKTLAVDTDPQLNLSTNFGVNVNELNSSLGDYLLERANGFQPEILNENLYLISAGSEAEKDMEELKNQGPYYYQLLNNFLENLSEKYDVIIFDTAPAFNAYTTSAIYTSSVYPVILPGINELLGLNATINFTQGLGKDISGIILIRKEKTALSDQIQEQLQEEYKDYLLKNIIRKNVALSECIVTHQSIFDYSKNANGAKDYSNLAEEIMKKEGIR
SIO_010081: FVE77_RS12240
subclass of: SO_0000673
so part of: FVE77_RS12240
location: complement(31455..32195)
location: region:31455-32195:-1
so has part: feature:31455-32195:-1:exon

WP_026745126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31455-32195:-1:exon

FVE77_RS12245
type: Gene
subclass of: SO_0000704
RO_0002162: 157688
locus tag: FVE77_RS12245
old locus tag: JCM16775_p1024
so part of: sequence
location: complement(32315..33391)
location: region:32315-33391:-1
so has part: feature:32315-33391:-1:exon
subclass of: SO_0000010

position:32315:-1
position: 32315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33391:-1
position: 33391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32315-33391:-1:exon

FVE77_RS12245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 157688
locus tag: FVE77_RS12245
old locus tag: JCM16775_p1024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018450717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MGNEIVKYNNDFNNQALRNFSSEELNLLVTFFHKLKERGTDVLEYSFYELKKLIMLEKNMTVKEFTNTIMNVNKKLLSLNYTYRENNTIVQMAIFKTFKINLDEQILMISLNEDFRFLLNDFNKEWTRFELEEFVNLKSSYVKEFYRRMKQFRKTGFWRCSIDEFRYLMDIPENYKITNIDTRVLKPIMRELGEKYNLKIEKKYGFSGGRGRSRVTGFEFKFSNEKKVDIVAVTEEEDNNNPIPLSKPRKQKKKEETRVVSERKTRIVEAPPKIEKEKTLRKKIWDKINENTETIENLEAIYTGLKDKIQFRKLTEKYPQKIEEIKNMNMQLKAIYNIDENDFTQEIIELAEDLIIKK
SIO_010081: FVE77_RS12245
subclass of: SO_0000673
so part of: FVE77_RS12245
location: complement(32315..33391)
location: region:32315-33391:-1
so has part: feature:32315-33391:-1:exon

WP_026745127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32315-33391:-1:exon