Magnetococcus marinus MC-1, complete sequence.
Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.
Magnetococcus marinus gen. nov., sp. nov., a marine, magnetotactic bacterium that represents a novel lineage (Magnetococcaceae fam. nov., Magnetococcales ord. nov.) at the base of the Alphaproteobacteria
Int J Syst Evol Microbiol 63 (Pt 3), 801-808 (2013)
Complete sequence of Magnetococcus sp. MC-1
Submitted (20-SEP-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP000471.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 2351493\nSource DNA and bacteria available from Dennis Bazylinski\n(dbazylin@iastate.edu)\nContacts: Dennis Bazylinski (dbazylin@iastate.edu)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/10/2022 05:17:25\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,849\nCDSs (total) :: 3,789\nGenes (coding) :: 3,735\nCDSs (with protein) :: 3,735\nGenes (RNA) :: 60\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 6\nPseudo Genes (total) :: 54\nCDSs (without protein) :: 54\nPseudo Genes (ambiguous residues) :: 0 of 54\nPseudo Genes (frameshifted) :: 16 of 54\nPseudo Genes (incomplete) :: 50 of 54\nPseudo Genes (internal stop) :: 4 of 54\nPseudo Genes (multiple problems) :: 14 of 54\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_011711704.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00611.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:TIGR02646.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: protein motif:HMM:NF011501.0
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:TIGR01402.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01400.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00328.1
COORDINATES: protein motif:HMM:NF014668.2
COORDINATES: similar to AA sequence:RefSeq:WP_011711716.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00097.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_011711718.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_011711719.1
IS4-like element ISMasp2 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_011711720.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002341.0
GO:0004057 - arginyltransferase activity [Evidence IEA]
GO:0016598 - protein arginylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: protein motif:HMM:NF001314.0
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_011711728.1
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00538.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
oxygen-independent coproporphyrinogen III oxidase
COORDINATES: protein motif:HMM:TIGR00562.1
GO:0004729 - oxygen-dependent protoporphyrinogen oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01406.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024834.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011711734.1
GO:0008710 - 8-amino-7-oxononanoate synthase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02072.1
GO:0008171 - O-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011711737.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024891.2
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004624.0
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:TIGR00018.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011711743.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:TIGR01498.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: protein motif:HMM:NF014600.2
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012471.2
COORDINATES: protein motif:HMM:TIGR03538.1
GO:0009016 - succinyldiaminopimelate transaminase activity [Evidence IEA]
GO:0019877 - diaminopimelate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008035733.1
GO:0008666 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
COORDINATES: protein motif:HMM:NF009557.0
GO:0009014 - succinyl-diaminopimelate desuccinylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013426.2
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: protein motif:HMM:TIGR03342.1
TusE/DsrC/DsvC family sulfur relay protein
COORDINATES: protein motif:HMM:NF014695.2
respiratory nitrate reductase subunit gamma
COORDINATES: protein motif:HMM:NF014774.2
COORDINATES: similar to AA sequence:RefSeq:WP_008035575.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00539.1
COORDINATES: similar to AA sequence:RefSeq:WP_011711756.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028509.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00518.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013594.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005310305.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011711768.1
COORDINATES: protein motif:HMM:NF012874.2
COORDINATES: similar to AA sequence:RefSeq:WP_011705588.1
COORDINATES: similar to AA sequence:RefSeq:WP_003112503.1
COORDINATES: similar to AA sequence:RefSeq:WP_011711772.1
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:NF014660.2
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00208.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_006708235.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011711795.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF025885.2
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF012402.2
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: protein motif:HMM:NF012753.2
COORDINATES: protein motif:HMM:NF019194.2
COORDINATES: protein motif:HMM:TIGR00857.1
COORDINATES: similar to AA sequence:RefSeq:WP_011711805.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: protein motif:HMM:NF003549.0
GO:0009116 - nucleoside metabolic process [Evidence IEA]
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: protein motif:HMM:TIGR00052.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF015350.2
STELLO glycosyltransferase family protein
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: similar to AA sequence:RefSeq:WP_011911471.1
COORDINATES: protein motif:HMM:NF024700.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017407751.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF024935.2
COORDINATES: protein motif:HMM:NF024211.2
COORDINATES: similar to AA sequence:RefSeq:WP_018286761.1
COORDINATES: similar to AA sequence:RefSeq:WP_003113237.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_003113238.1
COORDINATES: protein motif:HMM:NF024978.2
COORDINATES: protein motif:HMM:NF009381.0
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF037817.2
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:NF016245.2
COORDINATES: protein motif:HMM:TIGR00497.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_009567916.1
COORDINATES: protein motif:HMM:NF024706.2
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF008573.0
COORDINATES: protein motif:HMM:TIGR00348.1
type I restriction endonuclease subunit R
COORDINATES: protein motif:HMM:TIGR00589.1
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011711836.1
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008035561.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF013322.2
COORDINATES: protein motif:HMM:NF016286.2
ClpXP protease specificity-enhancing factor SspB
COORDINATES: protein motif:HMM:NF024106.2
COORDINATES: similar to AA sequence:RefSeq:WP_008166904.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011711843.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF002826.0
COORDINATES: protein motif:HMM:TIGR03707.1
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006793 - phosphorus metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03346.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:TIGR01686.1
COORDINATES: protein motif:HMM:NF013868.2
COORDINATES: protein motif:HMM:NF019292.2
COORDINATES: protein motif:HMM:NF008757.0
lipopolysaccharide assembly protein LapB
COORDINATES: protein motif:HMM:NF017021.2
COORDINATES: protein motif:HMM:NF027681.2
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF033503.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:TIGR01379.1
GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01951.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_011711865.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006803.0
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: protein motif:HMM:TIGR00187.1
COORDINATES: protein motif:HMM:TIGR00326.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_011711869.1
COORDINATES: protein motif:HMM:NF004051.0
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_020044131.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF014300.2
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011711874.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF014234.2
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: protein motif:HMM:NF008865.0
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00836.1
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
transglycosylase SLT domain-containing protein
COORDINATES: protein motif:HMM:NF024850.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: protein motif:HMM:NF026177.2
GO:0046872 - metal ion binding [Evidence IEA]
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF013853.2
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: protein motif:HMM:NF012707.2
amino acid ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF018701.2
COORDINATES: protein motif:HMM:NF025003.2
COORDINATES: protein motif:HMM:NF023167.2
COORDINATES: protein motif:HMM:NF033652.1
COORDINATES: protein motif:HMM:NF015862.2
COORDINATES: protein motif:HMM:NF025696.2
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:TIGR03104.1
N-acetylglutaminylglutamine amidotransferase
COORDINATES: protein motif:HMM:TIGR03103.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03106.1
osmoprotectant NAGGN system M42 family peptidase
COORDINATES: protein motif:HMM:NF023242.2
GNAT family N-acetyltransferase/peptidase C39 family protein
COORDINATES: protein motif:HMM:NF022447.2
COORDINATES: protein motif:HMM:NF014623.2
COORDINATES: protein motif:HMM:NF037997.1
GO:0015114 - phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]; GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024883.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00153.1
COORDINATES: protein motif:HMM:NF013543.2
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF017081.2
COORDINATES: protein motif:HMM:TIGR01084.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF019099.2
COORDINATES: protein motif:HMM:NF018685.2
COORDINATES: protein motif:HMM:NF014477.2
COORDINATES: protein motif:HMM:NF008692.0
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: protein motif:HMM:NF014054.2
GO:0008813 - chorismate lyase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01474.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024970.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00148.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:NF015077.2
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_011711945.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1
COORDINATES: similar to AA sequence:RefSeq:WP_011711947.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_010645784.1
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: protein motif:HMM:NF012832.2
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008035992.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: protein motif:HMM:TIGR00691.1
GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016291667.1
GO:0019239 - deaminase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023494.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: protein motif:HMM:NF004384.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024772.2
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF016895.2
COORDINATES: similar to AA sequence:RefSeq:WP_016291128.1
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: protein motif:HMM:TIGR01134.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01396.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290463.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: protein motif:HMM:NF014143.2
flagellar hook-basal body complex protein FliE
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: protein motif:HMM:TIGR00207.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: similar to AA sequence:RefSeq:WP_003820061.1
COORDINATES: protein motif:HMM:NF006509.0
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_008033616.1
COORDINATES: similar to AA sequence:RefSeq:WP_011711977.1
COORDINATES: protein motif:HMM:NF023299.2
COORDINATES: protein motif:HMM:NF012522.2
COORDINATES: protein motif:HMM:TIGR00014.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF015722.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: protein motif:HMM:NF024306.2
COORDINATES: protein motif:HMM:NF036537.2
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: protein motif:HMM:NF025214.2
COORDINATES: similar to AA sequence:RefSeq:WP_011711994.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005144860.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:TIGR03533.1
GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0042273 - ribosomal large subunit biogenesis [Evidence IEA]
50S ribosomal protein L3 N(5)-glutamine methyltransferase
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03464.1
GO:0004311 - farnesyltranstransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03465.1
GO:0016767 - geranylgeranyl-diphosphate geranylgeranyltransferase activity [Evidence IEA]
GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03467.1
COORDINATES: protein motif:HMM:TIGR03302.1
outer membrane protein assembly factor BamD
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF012245.2
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_003527364.1
COORDINATES: protein motif:HMM:NF021165.2
COORDINATES: protein motif:HMM:NF020652.2
COORDINATES: protein motif:HMM:NF013460.2
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: protein motif:HMM:NF024487.2
COORDINATES: protein motif:HMM:NF033517.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714232.1
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_011712020.1
COORDINATES: protein motif:HMM:NF013755.2
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:TIGR00526.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: protein motif:HMM:TIGR03026.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:NF019846.2
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014481080.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: protein motif:HMM:NF019262.2
transmembrane region and signal peptide prediction
COORDINATES: similar to AA sequence:RefSeq:WP_020044135.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00262.1
COORDINATES: protein motif:HMM:NF028537.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
phosphoethanolamine--lipid A transferase
COORDINATES: protein motif:HMM:NF021363.2
COORDINATES: protein motif:HMM:NF019000.2
host-nuclease inhibitor Gam family protein
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF009057.0
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF012387.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: protein motif:HMM:NF024833.2
GO:0019867 - outer membrane [Evidence IEA]
glycine zipper 2TM domain-containing protein
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: protein motif:HMM:NF024901.2
COORDINATES: similar to AA sequence:RefSeq:WP_012207276.1
COORDINATES: protein motif:HMM:NF013851.2
BolA/IbaG family iron-sulfur metabolism protein
COORDINATES: protein motif:HMM:NF014247.2
COORDINATES: similar to AA sequence:RefSeq:WP_008035833.1
COORDINATES: similar to AA sequence:RefSeq:WP_008035832.1
GO:0045275 - respiratory chain complex III [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008121 - ubiquinol-cytochrome-c reductase activity [Evidence IEA]
ubiquinol-cytochrome c reductase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF012797.2
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011712056.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712059.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00168.2
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004842459.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712062.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712063.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: protein motif:HMM:TIGR00224.1
GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712068.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:TIGR00087.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF001208.0
GO:0050218 - propionate-CoA ligase activity [Evidence IEA]
GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020044251.1
COORDINATES: protein motif:HMM:NF006367.0
acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
COORDINATES: protein motif:HMM:NF013225.2
COORDINATES: protein motif:HMM:NF006958.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:NF006944.0
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015049.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF021424.2
COORDINATES: protein motif:HMM:NF025761.2
circularly permuted type 2 ATP-grasp protein
COORDINATES: protein motif:HMM:NF013961.2
COORDINATES: protein motif:HMM:NF025082.2
COORDINATES: protein motif:HMM:NF016086.2
COORDINATES: protein motif:HMM:TIGR02481.1
hybrid sensor histidine kinase/response regulator
COORDINATES: protein motif:HMM:TIGR00229.1
PAS domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF012772.2
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: protein motif:HMM:NF014560.2
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014447.2
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: similar to AA sequence:RefSeq:WP_011347508.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712111.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00186.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: protein motif:HMM:NF024829.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF025611.2
GO:0005509 - calcium ion binding [Evidence IEA]
GO:0007156 - homophilic cell adhesion via plasma membrane adhesion molecules [Evidence IEA]
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF012161.0
GO:0008800 - beta-lactamase activity [Evidence IEA]
GO:0030655 - beta-lactam antibiotic catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01824.1
aminodeoxychorismate synthase, component I
CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein
COORDINATES: protein motif:HMM:TIGR00384.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:TIGR01812.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611086.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011712127.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016290.2
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: protein motif:HMM:NF018884.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712131.1
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712133.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01496.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_041640896.1
IS66-like element ISMasp4 family transposase
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: protein motif:HMM:NF022072.2
type II toxin-antitoxin system RatA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_011897301.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF038006.1
GO:0015297 - antiporter activity [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024740.2
COORDINATES: protein motif:HMM:NF040786.1
selenium metabolism-associated LysR family transcriptional regulator
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: protein motif:HMM:NF016243.2
COORDINATES: protein motif:HMM:NF033788.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF008229.0
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF014038.2
COORDINATES: protein motif:HMM:TIGR00260.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF027421.2
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: protein motif:HMM:NF016843.2
COORDINATES: protein motif:HMM:NF024915.2
COORDINATES: protein motif:HMM:TIGR02802.1
GO:0009279 - cell outer membrane [Evidence IEA]
peptidoglycan-associated lipoprotein Pal
COORDINATES: protein motif:HMM:TIGR02800.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
Tol-Pal system beta propeller repeat protein TolB
COORDINATES: protein motif:HMM:NF024503.2
COORDINATES: protein motif:HMM:TIGR02794.1
GO:0098567 - periplasmic side of plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF014525.2
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:0061024 - membrane organization [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02796.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02799.1
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tol-pal system-associated acyl-CoA thioesterase
COORDINATES: similar to AA sequence:RefSeq:WP_011712168.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:NF001040.0
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_011712170.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_011712171.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF033779.0
COORDINATES: protein motif:HMM:NF015523.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00614.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024825.2
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003082133.1
branched-chain amino acid ABC transporter permease
COORDINATES: protein motif:HMM:NF008450.0
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
high-affinity branched-chain amino acid ABC transporter permease LivM
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013801934.1
COORDINATES: protein motif:HMM:NF016489.2
COORDINATES: protein motif:HMM:NF014517.2
nicotinamide-nucleotide amidohydrolase family protein
COORDINATES: protein motif:HMM:NF015679.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013124.2
COORDINATES: protein motif:HMM:TIGR00282.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712189.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF003672.0
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_001125202.1
GO:0000917 - division septum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290939.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712196.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02273.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011712198.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_011712199.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712200.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712202.1
COORDINATES: similar to AA sequence:RefSeq:WP_020044525.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712204.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: protein motif:HMM:NF001273.0
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF009732.0
GO:0008119 - thiopurine S-methyltransferase activity [Evidence IEA]
GO:0010038 - response to metal ion [Evidence IEA]
COORDINATES: protein motif:HMM:NF024587.2
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: protein motif:HMM:NF026155.2
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit beta/FixA family protein
thiol:disulfide interchange protein DsbA/DsbL
COORDINATES: similar to AA sequence:RefSeq:WP_011906133.1
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_011712219.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF010925.0
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:TIGR02037.1
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein DctP
COORDINATES: similar to AA sequence:RefSeq:WP_011712226.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010147.0
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
iron-sulfur cluster insertion protein ErpA
COORDINATES: protein motif:HMM:NF021535.2
COORDINATES: protein motif:HMM:NF004637.0
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF028441.2
outer membrane lipoprotein-sorting protein
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF028235.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:TIGR01844.1
COORDINATES: protein motif:HMM:TIGR01843.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: protein motif:HMM:TIGR03375.1
COORDINATES: protein motif:HMM:NF019320.2
GO:0020037 - heme binding [Evidence IEA]
heme NO-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024839.2
COORDINATES: protein motif:HMM:TIGR00745.1
COORDINATES: protein motif:HMM:NF001664.0
COORDINATES: similar to AA sequence:RefSeq:WP_011047645.1
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF024214.2
acylneuraminate cytidylyltransferase family protein
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: protein motif:HMM:TIGR03568.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0006047 - UDP-N-acetylglucosamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002864265.1
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF023757.2
COORDINATES: similar to AA sequence:RefSeq:WP_005772222.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011714171.1
COORDINATES: protein motif:HMM:NF012499.2
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
polysaccharide ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: protein motif:HMM:TIGR04063.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
glycosyltransferase, exosortase A system-associated
COORDINATES: protein motif:HMM:TIGR03097.1
putative O-glycosylation ligase, exosortase A system-associated
COORDINATES: protein motif:HMM:TIGR03013.1
TIGR03013 family PEP-CTERM/XrtA system glycosyltransferase
COORDINATES: protein motif:HMM:NF017001.2
COORDINATES: protein motif:HMM:TIGR03007.1
COORDINATES: protein motif:HMM:TIGR03018.1
COORDINATES: protein motif:HMM:TIGR00236.1
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:TIGR03006.1
COORDINATES: protein motif:HMM:TIGR03019.1
FemAB family PEP-CTERM system-associated protein
COORDINATES: protein motif:HMM:TIGR03087.1
TIGR03087 family PEP-CTERM/XrtA system glycosyltransferase
COORDINATES: protein motif:HMM:TIGR03088.1
TIGR03088 family PEP-CTERM/XrtA system glycosyltransferase
COORDINATES: protein motif:HMM:TIGR04353.1
HPr-rel-A system PqqD family peptide chaperone
COORDINATES: protein motif:HMM:TIGR04352.1
COORDINATES: protein motif:HMM:NF026257.2
COORDINATES: protein motif:HMM:TIGR03108.1
amidotransferase 1, exosortase A system-associated
COORDINATES: protein motif:HMM:NF023267.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712286.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: protein motif:HMM:NF001140.0
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: protein motif:HMM:NF016908.2
COORDINATES: protein motif:HMM:TIGR00449.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00176.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
COORDINATES: protein motif:HMM:TIGR01682.1
molybdopterin converting factor subunit 1
COORDINATES: protein motif:HMM:NF013012.2
COORDINATES: protein motif:HMM:NF014798.2
COORDINATES: protein motif:HMM:NF012670.2
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: protein motif:HMM:TIGR04283.1
GO:0009058 - biosynthetic process [Evidence IEA]
TIGR04283 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: protein motif:HMM:TIGR00064.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF013867.2
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_000036361.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: protein motif:HMM:NF024914.2
COORDINATES: protein motif:HMM:NF013731.2
COORDINATES: protein motif:HMM:NF014622.2
COORDINATES: protein motif:HMM:NF024786.2
COORDINATES: protein motif:HMM:NF013411.2
COORDINATES: protein motif:HMM:NF024703.2
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:NF024590.2
COORDINATES: protein motif:HMM:NF012780.2
guanylate kinase/L-type calcium channel region
COORDINATES: protein motif:HMM:NF001204.0
GO:0008803 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity [Evidence IEA]
symmetrical bis(5'-nucleosyl)-tetraphosphatase
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: protein motif:HMM:NF023273.2
COORDINATES: protein motif:HMM:NF017442.2
COORDINATES: protein motif:HMM:NF027528.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014698.2
COORDINATES: similar to AA sequence:RefSeq:WP_076612009.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS3-like element ISMasp3 family transposase
COORDINATES: protein motif:HMM:TIGR04416.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: protein motif:HMM:NF025189.2
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF025819.2
COORDINATES: protein motif:HMM:NF025813.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012383.2
phosphoribosyltransferase family protein
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: protein motif:HMM:TIGR00531.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: protein motif:HMM:NF003804.0
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01683.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010886483.1
bifunctional sulfur carrier protein/thiazole synthase protein
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: protein motif:HMM:NF019313.2
COORDINATES: protein motif:HMM:NF017539.2
COORDINATES: protein motif:HMM:NF004015.0
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_011712363.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: protein motif:HMM:TIGR00135.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: protein motif:HMM:NF009070.0
RnfABCDGE type electron transport complex subunit E
COORDINATES: protein motif:HMM:NF002519.0
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
COORDINATES: protein motif:HMM:NF015100.2
RnfABCDGE type electron transport complex subunit D
COORDINATES: protein motif:HMM:NF003454.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712370.1
COORDINATES: protein motif:HMM:NF003481.0
COORDINATES: protein motif:HMM:NF008669.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
iron-sulfur cluster carrier protein ApbC
COORDINATES: similar to AA sequence:RefSeq:WP_011712374.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007803220.1
COORDINATES: similar to AA sequence:RefSeq:WP_003050245.1
COORDINATES: protein motif:HMM:NF018648.2
GO:0006885 - regulation of pH [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011227669.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_000441062.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF015908.2
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:TIGR00456.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF008730.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01317.1
COORDINATES: protein motif:HMM:NF015983.2
B12-binding domain-containing radical SAM protein
COORDINATES: protein motif:HMM:NF017786.2
COORDINATES: protein motif:HMM:NF017016.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712396.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1
COORDINATES: protein motif:HMM:NF004189.0
COORDINATES: protein motif:HMM:NF003763.0
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009331695.1
COORDINATES: protein motif:HMM:NF008758.0
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
COORDINATES: protein motif:HMM:TIGR01081.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF014659.2
COORDINATES: protein motif:HMM:NF024778.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF004886.0
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012869.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: protein motif:HMM:NF024376.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0043168 - anion binding [Evidence IEA]; GO:0043225 - ATPase-coupled inorganic anion transmembrane transporter activity [Evidence IEA]
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014641.2
COORDINATES: similar to AA sequence:RefSeq:YP_005224448.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712421.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:NF000942.0
NAD(P)-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF017522.2
dTDP-6-deoxy-L-hexose 3-O-methyltransferase
COORDINATES: protein motif:HMM:NF039586.1
COORDINATES: protein motif:HMM:NF025692.2
COORDINATES: protein motif:HMM:TIGR00325.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: protein motif:HMM:TIGR00065.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF007009.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015739.2
FtsQ-type POTRA domain-containing protein
COORDINATES: protein motif:HMM:NF002378.0
GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010480.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712433.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01133.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:TIGR02614.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_011712437.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:NF001126.0
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF013100.2
COORDINATES: protein motif:HMM:NF016860.2
COORDINATES: similar to AA sequence:RefSeq:WP_015271715.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF014589.2
COORDINATES: protein motif:HMM:NF039953.1
COORDINATES: protein motif:HMM:NF039992.1
COORDINATES: protein motif:HMM:NF012382.2
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF010052.0
COORDINATES: protein motif:HMM:TIGR01179.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025025.2
PAS domain-containing hybrid sensor histidine kinase/response regulator
COORDINATES: protein motif:HMM:NF005695.0
GO:0018826 - methionine gamma-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: protein motif:HMM:NF015581.2
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:NF014708.2
COORDINATES: protein motif:HMM:NF018482.2
invasion associated locus B family protein
COORDINATES: protein motif:HMM:NF015803.2
COORDINATES: protein motif:HMM:TIGR01901.1
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012251120.1
COORDINATES: similar to AA sequence:RefSeq:WP_012206009.1
COORDINATES: protein motif:HMM:NF018154.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012206008.1
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: similar to AA sequence:RefSeq:WP_003158914.1
COORDINATES: similar to AA sequence:RefSeq:WP_012537444.1
COORDINATES: protein motif:HMM:NF013379.2
COORDINATES: protein motif:HMM:NF016807.2
COORDINATES: protein motif:HMM:NF012730.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF021375.2
COORDINATES: protein motif:HMM:NF004208.0
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:NF020977.2
COORDINATES: protein motif:HMM:NF012575.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021589.2
COORDINATES: protein motif:HMM:NF014606.2
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:NF017416.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712492.1
GO:0016615 - malate dehydrogenase activity [Evidence IEA]
GO:0006108 - malate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02535.1
cofactor-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF013026.2
COORDINATES: protein motif:HMM:NF028228.2
COORDINATES: protein motif:HMM:NF011202.0
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_008034663.1
COORDINATES: protein motif:HMM:NF004128.0
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
50S ribosomal protein L25/general stress protein Ctc
COORDINATES: protein motif:HMM:NF013368.2
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1
COORDINATES: protein motif:HMM:NF003558.0
GO:0004413 - homoserine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003093227.1
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:NF011991.0
COORDINATES: protein motif:HMM:NF016280.2
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: protein motif:HMM:TIGR00368.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712511.1
COORDINATES: similar to AA sequence:RefSeq:WP_016204868.1
COORDINATES: protein motif:HMM:TIGR00964.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005020265.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_011712515.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712516.1
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712518.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712519.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011712520.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_020185797.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712523.1
COORDINATES: similar to AA sequence:RefSeq:WP_020185793.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712525.1
COORDINATES: protein motif:HMM:NF012782.2
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712527.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712528.1
COORDINATES: similar to AA sequence:RefSeq:WP_011567666.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712530.1
COORDINATES: similar to AA sequence:RefSeq:WP_000529946.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712532.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712533.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712534.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712536.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712537.1
COORDINATES: similar to AA sequence:RefSeq:WP_002946164.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712539.1
COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1
COORDINATES: similar to AA sequence:RefSeq:NP_312196.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712542.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712543.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712544.1
COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1
COORDINATES: similar to AA sequence:RefSeq:WP_012348927.1
COORDINATES: similar to AA sequence:RefSeq:WP_000090796.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712548.1
COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712550.1
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011712551.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: protein motif:HMM:TIGR04315.1
GO:0022904 - respiratory electron transport chain [Evidence IEA]
tetrathionate reductase family octaheme c-type cytochrome
COORDINATES: protein motif:HMM:NF024628.2
COORDINATES: protein motif:HMM:TIGR00075.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028488.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF013242.2
COORDINATES: protein motif:HMM:NF012592.2
COORDINATES: protein motif:HMM:TIGR00072.1
COORDINATES: protein motif:HMM:NF012618.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:TIGR04337.1
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_005489847.1
ferric iron uptake transcriptional regulator
COORDINATES: protein motif:HMM:NF012570.2
COORDINATES: protein motif:HMM:NF004126.0
GO:0004108 - citrate (Si)-synthase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00118.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712576.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712577.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
phosphatidylserine decarboxylase family protein
COORDINATES: protein motif:HMM:TIGR00473.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF002087.0
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712581.1
COORDINATES: protein motif:HMM:NF021981.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02191.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF000908.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712586.1
COORDINATES: similar to AA sequence:RefSeq:WP_000605938.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011712917.1
COORDINATES: similar to AA sequence:RefSeq:WP_012317149.1
COORDINATES: protein motif:HMM:NF018928.2
outer membrane protein transport protein
COORDINATES: protein motif:HMM:NF015316.2
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: protein motif:HMM:NF014645.2
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016311.2
3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: protein motif:HMM:TIGR02519.1
pilus (MSHA type) biogenesis protein MshL
COORDINATES: protein motif:HMM:NF016611.2
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:TIGR02532.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF012298.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012493.2
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712617.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014825.2
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011712619.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00238.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712623.1
COORDINATES: protein motif:HMM:NF006828.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011712628.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: protein motif:HMM:NF021009.2
COORDINATES: protein motif:HMM:NF013713.2
COORDINATES: protein motif:HMM:TIGR00150.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: protein motif:HMM:NF013315.2
protein-L-isoaspartate O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008036546.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00977.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: protein motif:HMM:TIGR03623.1
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:TIGR00730.1
COORDINATES: protein motif:HMM:NF025112.2
COORDINATES: protein motif:HMM:TIGR00089.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712653.1
IS1380-like element ISMasp7 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_011713469.1
COORDINATES: protein motif:HMM:TIGR04366.1
COORDINATES: similar to AA sequence:RefSeq:WP_011298219.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018284512.1
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712779.1
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: protein motif:HMM:TIGR01511.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011911532.1
COORDINATES: protein motif:HMM:TIGR01383.1
COORDINATES: similar to AA sequence:RefSeq:WP_006717394.1
COORDINATES: protein motif:HMM:NF025253.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712692.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO:0019419 - sulfate reduction [Evidence IEA]
sulfate adenylyltransferase subunit CysD
COORDINATES: protein motif:HMM:NF004035.0
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
sulfate adenylyltransferase subunit CysN
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]; GO:0033219 - urea binding [Evidence IEA]
GO:0015840 - urea transport [Evidence IEA]
urea ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR03409.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
urea ABC transporter permease subunit UrtB
COORDINATES: protein motif:HMM:TIGR03408.1
urea ABC transporter permease subunit UrtC
COORDINATES: protein motif:HMM:TIGR03411.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
urea ABC transporter ATP-binding protein UrtD
COORDINATES: protein motif:HMM:TIGR03410.1
urea ABC transporter ATP-binding subunit UrtE
COORDINATES: protein motif:HMM:NF013899.2
GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007435446.1
GO:0016151 - nickel cation binding [Evidence IEA]; GO:0009039 - urease activity [Evidence IEA]
GO:0043419 - urea catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712701.1
GO:0035550 - urease complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712702.1
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017045.2
COORDINATES: protein motif:HMM:NF013858.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712705.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712706.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712707.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02212.1
GO:0042953 - lipoprotein transport [Evidence IEA]
lipoprotein-releasing ABC transporter permease subunit
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290865.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:NF000953.0
GO:0032300 - mismatch repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03647.1
COORDINATES: protein motif:HMM:TIGR03648.1
COORDINATES: protein motif:HMM:NF021824.2
GO:0008773 - [protein-PII] uridylyltransferase activity [Evidence IEA]
DUF294 nucleotidyltransferase-like domain-containing protein
COORDINATES: protein motif:HMM:NF013122.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713614.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: protein motif:HMM:NF012437.2
COORDINATES: protein motif:HMM:NF013856.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712723.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712725.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: protein motif:HMM:NF016212.2
COORDINATES: protein motif:HMM:NF016228.2
aminoglycoside phosphotransferase family protein
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_018041037.1
COORDINATES: protein motif:HMM:NF006764.0
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0006188 - IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: protein motif:HMM:NF016221.2
COORDINATES: protein motif:HMM:NF022681.2
COORDINATES: similar to AA sequence:RefSeq:WP_011715118.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003244540.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712748.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011073053.1
COORDINATES: protein motif:HMM:NF037100.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF024809.2
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020045114.1
COORDINATES: protein motif:HMM:NF027964.2
saccharopine dehydrogenase family protein
COORDINATES: protein motif:HMM:NF012500.2
COORDINATES: protein motif:HMM:TIGR01970.1
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: protein motif:HMM:NF013094.2
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:NF013213.2
COORDINATES: protein motif:HMM:NF025070.2
COORDINATES: protein motif:HMM:NF024777.2
COORDINATES: protein motif:HMM:NF015902.3
GO:0051301 - cell division [Evidence IEA]
COORDINATES: protein motif:HMM:NF022599.2
COORDINATES: protein motif:HMM:TIGR02717.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712676.1
COORDINATES: protein motif:HMM:NF013487.2
COORDINATES: protein motif:HMM:NF012307.2
reverse transcriptase domain-containing protein
COORDINATES: protein motif:HMM:NF012485.2
type II and III secretion system protein
COORDINATES: protein motif:HMM:NF013109.2
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF017076.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF016462.2
COORDINATES: protein motif:HMM:NF015038.2
COORDINATES: protein motif:HMM:NF025600.2
COORDINATES: similar to AA sequence:RefSeq:WP_012974334.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003531811.1
COORDINATES: protein motif:HMM:TIGR01245.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00566.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_003210962.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713717.1
COORDINATES: protein motif:HMM:NF019149.2
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
helix-turn-helix domain-containing protein
formylglycine-generating enzyme family protein
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
DDE-type integrase/transposase/recombinase
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: protein motif:HMM:NF012334.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF013714.2
COORDINATES: protein motif:HMM:NF015406.2
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: protein motif:HMM:NF014571.2
glyoxalase/bleomycin resistance/dioxygenase family protein
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:NF014164.2
GO:0004177 - aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000786547.1
COORDINATES: similar to AA sequence:RefSeq:WP_003296527.1
GO:0018454 - acetoacetyl-CoA reductase activity [Evidence IEA]
GO:0042619 - poly-hydroxybutyrate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01848.1
polyhydroxyalkanoate synthesis repressor PhaR
COORDINATES: protein motif:HMM:NF020918.2
COORDINATES: protein motif:HMM:TIGR01834.1
class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE
COORDINATES: protein motif:HMM:TIGR01836.1
class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC
COORDINATES: protein motif:HMM:NF012503.2
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF027613.2
COORDINATES: protein motif:HMM:NF014805.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: protein motif:HMM:TIGR02464.1
COORDINATES: protein motif:HMM:NF015949.2
COORDINATES: protein motif:HMM:TIGR02142.1
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdenum ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR02141.1
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]
molybdate ABC transporter permease subunit
COORDINATES: protein motif:HMM:NF016938.2
COORDINATES: similar to AA sequence:RefSeq:WP_013066317.1
COORDINATES: protein motif:HMM:NF016226.2
COORDINATES: protein motif:HMM:TIGR02660.1
GO:0004410 - homocitrate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02936.1
COORDINATES: protein motif:HMM:TIGR02935.1
NifX-associated nitrogen fixation protein
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: protein motif:HMM:NF012375.2
GO:0009399 - nitrogen fixation [Evidence IEA]
nitrogenase iron-molybdenum cofactor biosynthesis protein NifN
COORDINATES: protein motif:HMM:TIGR01283.1
nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
COORDINATES: protein motif:HMM:NF033689.1
COORDINATES: protein motif:HMM:TIGR02934.1
COORDINATES: protein motif:HMM:TIGR01286.1
GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO:0016163 - nitrogenase activity [Evidence IEA]
nitrogenase molybdenum-iron protein subunit beta
COORDINATES: protein motif:HMM:TIGR01282.1
nitrogenase molybdenum-iron protein alpha chain
COORDINATES: similar to AA sequence:RefSeq:WP_011712868.1
GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF019005.2
NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase
COORDINATES: protein motif:HMM:TIGR01817.1
GO:0009399 - nitrogen fixation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
nif-specific transcriptional activator NifA
COORDINATES: protein motif:HMM:TIGR01290.1
nitrogenase cofactor biosynthesis protein NifB
COORDINATES: protein motif:HMM:NF012267.2
COORDINATES: protein motif:HMM:TIGR01616.1
COORDINATES: protein motif:HMM:NF016762.2
COORDINATES: protein motif:HMM:TIGR02662.1
GO:0047407 - ADP-ribosyl-[dinitrogen reductase] hydrolase activity [Evidence IEA]
GO:0009399 - nitrogen fixation [Evidence IEA]; GO:0036211 - protein modification process [Evidence IEA]
ADP-ribosyl-[dinitrogen reductase] hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_002663280.1
COORDINATES: protein motif:HMM:NF006696.0
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0019357 - nicotinate nucleotide biosynthetic process [Evidence IEA]; GO:0019358 - nicotinate nucleotide salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF024808.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF020917.2
GO:0043231 - intracellular membrane-bounded organelle [Evidence IEA]
CDGSH iron-sulfur domain-containing protein
COORDINATES: protein motif:HMM:NF013013.2
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712887.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_009565301.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714242.1
IS66-like element ISMasp5 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_013654850.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713716.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714418.1
COORDINATES: protein motif:HMM:NF022744.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712962.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712963.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712964.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714409.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712902.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714344.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714206.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712970.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714404.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712907.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714339.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712909.1
D-Ala-D-Ala carboxypeptidase family metallohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011714468.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714467.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714466.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713691.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714463.1
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000014591.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713686.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714461.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714191.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714459.1
COORDINATES: protein motif:HMM:NF013965.2
COORDINATES: protein motif:HMM:NF019009.2
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_011714190.1
phage terminase large subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011714189.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712925.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714392.1
GO:0044423 - virion component [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712991.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713677.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714451.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712994.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714386.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712996.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714184.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713671.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714317.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714381.1
COORDINATES: protein motif:HMM:NF027788.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713666.1
GO:0016032 - viral process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713665.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712940.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714377.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714376.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714437.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713009.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714435.1
COORDINATES: protein motif:HMM:TIGR00571.1
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
Dam family site-specific DNA-(adenine-N6)-methyltransferase
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714303.1
TM0106 family RecB-like putative nuclease
COORDINATES: similar to AA sequence:RefSeq:WP_011714302.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712952.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714300.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714299.1
COORDINATES: protein motif:HMM:NF016432.2
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011714297.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017500486.1
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712960.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714231.1
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011712898.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714410.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713701.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714402.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713696.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713695.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714336.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714465.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713690.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF015640.2
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_011714399.1
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011712983.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714332.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714331.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712986.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714395.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714325.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714383.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714181.1
COORDINATES: protein motif:HMM:NF025120.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713002.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714439.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713661.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713659.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714632.1
COORDINATES: similar to AA sequence:RefSeq:WP_012092586.1
COORDINATES: protein motif:HMM:NF024642.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF023276.2
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: protein motif:HMM:NF025063.2
COORDINATES: protein motif:HMM:NF019984.2
maturase-specific domain-containing protein
COORDINATES: protein motif:HMM:NF033516.0
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_011805842.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF018862.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712890.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612046.1
IS5-like element ISMasp6 family transposase
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611395.1
IS1634-like element ISMasp1 family transposase
COORDINATES: protein motif:HMM:NF013592.2
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF023171.2
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713178.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025793.2
COORDINATES: protein motif:HMM:NF011564.0
GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF003802.0
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
(deoxy)nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF039185.1
COORDINATES: similar to AA sequence:RefSeq:WP_017458192.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020801803.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002221803.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:NF024937.2
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:TIGR01358.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
3-deoxy-7-phosphoheptulonate synthase class II
COORDINATES: protein motif:HMM:TIGR01693.1
GO:0018177 - protein uridylylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1
COORDINATES: protein motif:HMM:TIGR00219.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03426.1
COORDINATES: protein motif:HMM:TIGR03423.1
COORDINATES: protein motif:HMM:TIGR02210.1
COORDINATES: protein motif:HMM:TIGR01853.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: protein motif:HMM:TIGR04282.1
TIGR04282 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: protein motif:HMM:NF016224.2
COORDINATES: protein motif:HMM:TIGR01620.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290567.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: protein motif:HMM:TIGR01327.1
GO:0004617 - phosphoglycerate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015164.2
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_017944086.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004978.0
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_016290775.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011713099.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_006681752.1
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713102.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014896110.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00211.2
COORDINATES: protein motif:HMM:TIGR01389.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022062.2
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:TIGR01070.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01350.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016944.2
COORDINATES: protein motif:HMM:NF016231.2
COORDINATES: protein motif:HMM:NF025000.2
COORDINATES: protein motif:HMM:NF018500.2
COORDINATES: similar to AA sequence:RefSeq:WP_172756218.1
COORDINATES: protein motif:HMM:NF025703.2
COORDINATES: protein motif:HMM:NF021446.2
COORDINATES: protein motif:HMM:NF008453.0
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016448894.1
COORDINATES: protein motif:HMM:NF024798.2
COORDINATES: protein motif:HMM:TIGR00413.1
septal ring lytic transglycosylase RlpA family protein
COORDINATES: protein motif:HMM:NF012970.2
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:NF006960.0
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004349.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00078.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713139.1
COORDINATES: protein motif:HMM:NF001965.0
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
chemotaxis-specific protein-glutamate methyltransferase CheB
COORDINATES: protein motif:HMM:NF015131.2
COORDINATES: protein motif:HMM:NF039312.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713545.1
COORDINATES: similar to AA sequence:RefSeq:WP_000466893.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF013183.2
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713159.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:TIGR02666.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF004281.0
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: protein motif:HMM:NF014296.2
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0006555 - methionine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021520.2
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: similar to AA sequence:RefSeq:WP_003113023.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713172.1
COORDINATES: protein motif:HMM:NF014585.2
hydantoinase B/oxoprolinase family protein
COORDINATES: protein motif:HMM:TIGR02100.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF022603.2
COORDINATES: protein motif:HMM:NF001905.0
COORDINATES: similar to AA sequence:RefSeq:WP_011713056.1
COORDINATES: protein motif:HMM:TIGR02093.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: protein motif:HMM:TIGR02095.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001947.0
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003690856.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013436118.1
GAF domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: protein motif:HMM:NF023459.2
COORDINATES: protein motif:HMM:TIGR02138.1
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR00974.1
COORDINATES: similar to AA sequence:RefSeq:WP_004810563.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: protein motif:HMM:NF024257.2
COORDINATES: similar to AA sequence:RefSeq:WP_008034577.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF006053.0
COORDINATES: protein motif:HMM:TIGR02193.1
GO:0008920 - lipopolysaccharide heptosyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
lipopolysaccharide heptosyltransferase I
COORDINATES: protein motif:HMM:NF015251.2
COORDINATES: protein motif:HMM:TIGR02195.1
lipopolysaccharide heptosyltransferase II
COORDINATES: protein motif:HMM:TIGR02197.1
GO:0008712 - ADP-glyceromanno-heptose 6-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008454.0
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0005975 - carbohydrate metabolic process [Evidence IEA]
bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
COORDINATES: protein motif:HMM:NF006506.0
GO:0016791 - phosphatase activity [Evidence IEA]
D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
COORDINATES: protein motif:HMM:NF022750.2
COORDINATES: similar to AA sequence:RefSeq:WP_000170456.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713217.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001567.0
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_011713219.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_000795698.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_011001079.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: protein motif:HMM:TIGR00706.1
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF006690.0
GO:0003994 - aconitate hydratase activity [Evidence IEA]
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF013188.2
GO:0015299 - solute:proton antiporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: protein motif:HMM:TIGR01933.1
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF021366.2
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: protein motif:HMM:NF025468.2
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: protein motif:HMM:NF021530.2
GO:0030745 - dimethylhistidine N-methyltransferase activity [Evidence IEA]
GO:0052699 - ergothioneine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024921.2
phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR01198.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF015237.2
COORDINATES: protein motif:HMM:NF015828.2
nitrate reductase cytochrome c-type subunit
COORDINATES: protein motif:HMM:NF007013.0
quinol dehydrogenase ferredoxin subunit NapH
COORDINATES: protein motif:HMM:NF007012.0
COORDINATES: protein motif:HMM:NF010055.0
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0008940 - nitrate reductase activity [Evidence IEA]
nitrate reductase catalytic subunit NapA
COORDINATES: protein motif:HMM:NF015861.2
COORDINATES: protein motif:HMM:TIGR00402.1
COORDINATES: protein motif:HMM:NF019335.2
TonB-dependent receptor plug domain-containing protein
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:NF016155.2
COORDINATES: protein motif:HMM:NF016064.2
YeeE/YedE thiosulfate transporter family protein
COORDINATES: protein motif:HMM:TIGR00178.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015422.2
helicase associated domain-containing protein
COORDINATES: protein motif:HMM:NF006194.0
bifunctional aldolase/short-chain dehydrogenase
COORDINATES: protein motif:HMM:NF006081.0
GO:0016829 - lyase activity [Evidence IEA]
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
COORDINATES: protein motif:HMM:NF036774.2
COORDINATES: similar to AA sequence:RefSeq:WP_003084552.1
type IV pilus twitching motility protein PilT
COORDINATES: similar to AA sequence:RefSeq:WP_013732232.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01062.1
GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF018513.2
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013727.2
COORDINATES: protein motif:HMM:TIGR00649.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713274.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01410.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
Sec-independent protein translocase protein TatB
COORDINATES: similar to AA sequence:RefSeq:WP_011713276.1
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:TIGR03142.1
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
c-type cytochrome biogenesis protein CcmI
COORDINATES: similar to AA sequence:RefSeq:WP_011713278.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: protein motif:HMM:NF016103.2
COORDINATES: protein motif:HMM:NF006883.0
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01083.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
molybdopterin oxidoreductase family protein
COORDINATES: protein motif:HMM:NF003740.0
COORDINATES: protein motif:HMM:NF017922.2
COORDINATES: similar to AA sequence:RefSeq:WP_014327616.1
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:TIGR00815.1
COORDINATES: protein motif:HMM:NF014269.2
LON peptidase substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF019874.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713300.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713301.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000288132.1
COORDINATES: protein motif:HMM:NF008112.0
GO:0008933 - lytic transglycosylase activity [Evidence IEA]
GO:0000270 - peptidoglycan metabolic process [Evidence IEA]
membrane-bound lytic murein transglycosylase MltF
COORDINATES: protein motif:HMM:NF013705.2
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03413.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF001399.0
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00547.1
GO:0008320 - protein transmembrane transporter activity [Evidence IEA]
outer membrane lipoprotein chaperone LolA
COORDINATES: similar to AA sequence:RefSeq:WP_011713327.1
YajQ family cyclic di-GMP-binding protein
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_006402503.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_011713330.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020045195.1
COORDINATES: protein motif:HMM:NF014404.2
COORDINATES: protein motif:HMM:NF015411.2
COORDINATES: protein motif:HMM:TIGR02476.1
GO:0016722 - oxidoreductase activity, acting on metal ions [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0032363 - FMN catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018262.2
GO:0060567 - negative regulation of termination of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF019896.2
COORDINATES: protein motif:HMM:NF015211.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713351.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016156.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712591.1
COORDINATES: protein motif:HMM:NF013132.2
GO:0008509 - anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:NF008748.0
GO:0003723 - RNA binding [Evidence IEA]; GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL
COORDINATES: similar to AA sequence:RefSeq:WP_016293514.1
COORDINATES: protein motif:HMM:TIGR00109.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00379.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001237.0
GO:0016783 - sulfurtransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03011.1
GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF024644.2
COORDINATES: protein motif:HMM:NF015851.2
COORDINATES: protein motif:HMM:NF011996.0
tRNA 5-hydroxyuridine modification protein YegQ
COORDINATES: protein motif:HMM:NF033394.1
COORDINATES: protein motif:HMM:NF024860.2
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713815.1
COORDINATES: protein motif:HMM:TIGR00637.1
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF022577.2
COORDINATES: protein motif:HMM:NF014542.2
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: protein motif:HMM:TIGR02397.1
COORDINATES: similar to AA sequence:RefSeq:WP_002479279.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_011713396.1
COORDINATES: protein motif:HMM:NF013974.2
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:NF014794.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012339.2
COORDINATES: protein motif:HMM:NF013086.2
COORDINATES: similar to AA sequence:RefSeq:WP_001020786.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018287377.1
COORDINATES: protein motif:HMM:TIGR03710.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:TIGR02177.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:NF015870.2
succinate dehydrogenase assembly factor 2
COORDINATES: similar to AA sequence:RefSeq:WP_011713409.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF001951.0
GO:0009678 - pyrophosphate hydrolysis-driven proton transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006033.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF004976.0
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:TIGR02639.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO:0043335 - protein unfolding [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpA
COORDINATES: protein motif:HMM:NF000672.0
COORDINATES: protein motif:HMM:NF008121.0
COORDINATES: protein motif:HMM:NF039482.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017485.2
COORDINATES: similar to AA sequence:RefSeq:WP_012536877.1
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
GO:0035998 - 7,8-dihydroneopterin 3'-triphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713422.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF006567.0
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006120509.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011713430.1
COORDINATES: protein motif:HMM:TIGR00757.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713434.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011713435.1
3-isopropylmalate dehydratase small subunit
COORDINATES: protein motif:HMM:NF012407.2
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018003337.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: protein motif:HMM:NF014072.2
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: protein motif:HMM:NF014594.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033936.1
COORDINATES: protein motif:HMM:NF016838.2
GO:0019645 - anaerobic electron transport chain [Evidence IEA]
dimethyl sulfoxide reductase anchor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010880781.1
COORDINATES: similar to AA sequence:RefSeq:WP_012971673.1
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:NF014088.2
COORDINATES: protein motif:HMM:NF014466.2
COORDINATES: similar to AA sequence:RefSeq:WP_003087843.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF023277.2
COORDINATES: protein motif:HMM:TIGR01703.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712656.1
COORDINATES: protein motif:HMM:NF028512.2
COORDINATES: similar to AA sequence:RefSeq:WP_004080710.1
bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: protein motif:HMM:NF014678.2
COORDINATES: protein motif:HMM:TIGR00266.1
COORDINATES: protein motif:HMM:NF022525.2
GGDEF domain-containing response regulator
COORDINATES: protein motif:HMM:TIGR00143.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713490.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713492.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713493.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713494.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003811796.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF011405.0
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: protein motif:HMM:NF009114.0
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070402 - NADPH binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:TIGR03303.1
outer membrane protein assembly factor BamA
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713502.1
COORDINATES: protein motif:HMM:TIGR01852.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: protein motif:HMM:NF037151.2
LpxI, functionally equivalent to LpxH, replaces it in LPS biosynthesis in a minority of bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
UDP-2,3-diacylglucosamine diphosphatase LpxI
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: protein motif:HMM:TIGR00215.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713508.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713512.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024516.2
AsmA-like C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF010706.0
GO:0008882 - [glutamate-ammonia-ligase] adenylyltransferase activity [Evidence IEA]
bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
COORDINATES: protein motif:HMM:NF005146.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008775.0
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: protein motif:HMM:TIGR00010.1
COORDINATES: protein motif:HMM:NF041131.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: protein motif:HMM:TIGR00678.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713522.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012149092.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003091135.1
COORDINATES: similar to AA sequence:RefSeq:WP_020044906.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: protein motif:HMM:TIGR00128.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: protein motif:HMM:TIGR00560.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF001824.0
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00544.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF016340.2
COORDINATES: protein motif:HMM:TIGR01967.1
COORDINATES: protein motif:HMM:TIGR00810.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713537.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001036337.1
COORDINATES: protein motif:HMM:NF015914.2
COORDINATES: protein motif:HMM:NF016258.2
outer membrane protein assembly factor BamE
COORDINATES: protein motif:HMM:NF013232.2
MTAP family purine nucleoside phosphorylase
COORDINATES: protein motif:HMM:NF025024.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:NF019121.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713153.1
COORDINATES: protein motif:HMM:NF013069.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
tetratricopeptide repeat-containing sulfotransferase family protein
COORDINATES: protein motif:HMM:NF019315.2
COORDINATES: protein motif:HMM:TIGR04486.1
GO:0030145 - manganese ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011715252.1
GO:0070069 - cytochrome complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0016669 - oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor [Evidence IEA]
GO:0019417 - sulfur oxidation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020350.2
thiosulfate oxidation carrier complex protein SoxZ
COORDINATES: similar to AA sequence:RefSeq:WP_011715253.1
thiosulfate oxidation carrier protein SoxY
COORDINATES: similar to AA sequence:RefSeq:WP_011715254.1
COORDINATES: protein motif:HMM:NF001095.0
COORDINATES: protein motif:HMM:NF024985.2
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF010675.0
COORDINATES: protein motif:HMM:TIGR02414.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein
COORDINATES: protein motif:HMM:NF016211.2
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: protein motif:HMM:NF017470.2
COORDINATES: protein motif:HMM:NF016356.2
DUF523 and DUF1722 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011713587.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713588.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: protein motif:HMM:NF006003.0
GO:0071268 - homocysteine biosynthetic process [Evidence IEA]; GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: protein motif:HMM:NF018076.2
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011713596.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF013760.2
MotA/TolQ/ExbB proton channel family protein
GO:0008519 - ammonium transmembrane transporter activity [Evidence IEA]
GO:0072488 - ammonium transmembrane transport [Evidence IEA]
Sel1-like repeat-containing protein kinase family protein
COORDINATES: protein motif:HMM:NF017770.2
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: protein motif:HMM:TIGR00149.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011713631.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013921.2
COORDINATES: similar to AA sequence:RefSeq:WP_010929996.1
COORDINATES: protein motif:HMM:NF033546.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712341.1
COORDINATES: protein motif:HMM:NF013798.2
COORDINATES: similar to AA sequence:RefSeq:WP_052642687.1
COORDINATES: protein motif:HMM:NF015724.2
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF014442.2
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714310.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714173.1
COORDINATES: protein motif:HMM:NF025088.2
COORDINATES: protein motif:HMM:NF021873.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713678.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714391.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714396.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714397.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712980.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713693.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712975.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713704.1
translesion error-prone DNA polymerase V autoproteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011713713.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714352.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712893.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712796.1
COORDINATES: protein motif:HMM:NF036878.2
COORDINATES: protein motif:HMM:NF001393.0
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012621.2
heavy-metal-associated domain-containing protein
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002490.0
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_003460350.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00245.1
iron export ABC transporter permease subunit FetB
COORDINATES: protein motif:HMM:TIGR00498.1
COORDINATES: protein motif:HMM:NF002955.0
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: protein motif:HMM:NF001236.0
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001214397.1
COORDINATES: protein motif:HMM:NF003952.0
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_020044169.1
GO:0008746 - NAD(P)+ transhydrogenase activity [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: protein motif:HMM:NF006974.0
GO:0008750 - NAD(P)+ transhydrogenase (AB-specific) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta
COORDINATES: protein motif:HMM:NF012442.2
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: protein motif:HMM:NF025226.2
COORDINATES: protein motif:HMM:TIGR01214.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF013509.2
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: protein motif:HMM:NF037081.2
COORDINATES: protein motif:HMM:NF015750.2
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: protein motif:HMM:TIGR01983.1
GO:0008689 - 3-demethylubiquinone-9 3-O-methyltransferase activity [Evidence IEA]
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF039343.1
phosphotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008034922.1
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF001808.0
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00392.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00083.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
GO:0006747 - FAD biosynthetic process [Evidence IEA]; GO:0009398 - FMN biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025010.2
SurA N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_008035932.1
microcin C ABC transporter permease YejB
COORDINATES: protein motif:HMM:TIGR02064.1
GO:0018551 - hydrogensulfite reductase activity [Evidence IEA]
GO:0019420 - dissimilatory sulfate reduction [Evidence IEA]
dissimilatory-type sulfite reductase subunit alpha
COORDINATES: protein motif:HMM:TIGR02066.1
dissimilatory-type sulfite reductase subunit beta
COORDINATES: protein motif:HMM:NF009410.0
COORDINATES: protein motif:HMM:NF017262.2
COORDINATES: protein motif:HMM:NF013494.2
4a-hydroxytetrahydrobiopterin dehydratase
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
radical SAM/SPASM domain-containing protein
COORDINATES: protein motif:HMM:NF014075.2
COORDINATES: protein motif:HMM:NF003507.0
COORDINATES: protein motif:HMM:NF013591.2
COORDINATES: protein motif:HMM:NF017658.2
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: similar to AA sequence:RefSeq:WP_011713804.1
PqqD family peptide modification chaperone
COORDINATES: protein motif:HMM:NF023376.2
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00106.1
COORDINATES: protein motif:HMM:NF036451.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011713386.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291309.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF005297.0
COORDINATES: protein motif:HMM:NF012206.1
COORDINATES: protein motif:HMM:NF019156.2
COORDINATES: protein motif:HMM:NF024923.2
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: protein motif:HMM:NF010590.0
COORDINATES: protein motif:HMM:NF012566.2
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: protein motif:HMM:NF005012.1
COORDINATES: protein motif:HMM:NF012373.2
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: protein motif:HMM:NF012636.2
COORDINATES: protein motif:HMM:NF015970.2
COORDINATES: protein motif:HMM:NF024641.2
COORDINATES: protein motif:HMM:NF009314.0
GO:0005451 - monovalent cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: protein motif:HMM:NF015993.2
GO:0015075 - ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - ion transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: protein motif:HMM:NF014012.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713839.1
COORDINATES: protein motif:HMM:NF038261.1
rhodoquinone biosynthesis methyltransferase RquA
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:NF004790.0
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF040916.1
COORDINATES: protein motif:HMM:NF036889.2
COORDINATES: protein motif:HMM:NF040998.1
GO:0110143 - magnetosome [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0006811 - ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF040992.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0110148 - biomineralization [Evidence IEA]
COORDINATES: protein motif:HMM:NF040991.1
COORDINATES: protein motif:HMM:NF033616.1
magnetosome biogenesis CDF transporter MamB
COORDINATES: protein motif:HMM:NF040966.1
GO:0110146 - magnetosome membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF026488.2
COORDINATES: protein motif:HMM:NF040965.1
magnetosome magnetite formation protein MamP
COORDINATES: protein motif:HMM:NF040961.1
COORDINATES: protein motif:HMM:NF033615.1
magnetosome biogenesis CDF transporter MamM
COORDINATES: protein motif:HMM:NF018058.2
COORDINATES: similar to AA sequence:RefSeq:WP_024080606.1
COORDINATES: protein motif:HMM:NF040964.1
GO:0005856 - cytoskeleton [Evidence IEA]
COORDINATES: protein motif:HMM:NF021485.2
COORDINATES: protein motif:HMM:NF038051.2
COORDINATES: protein motif:HMM:NF040963.1
COORDINATES: protein motif:HMM:NF040986.1
COORDINATES: protein motif:HMM:NF025062.2
COORDINATES: protein motif:HMM:TIGR00835.1
GO:0005416 - amino acid:cation symporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713899.1
COORDINATES: protein motif:HMM:NF024841.2
esterase-like activity of phytase family protein
COORDINATES: protein motif:HMM:NF016398.2
COORDINATES: protein motif:HMM:NF011648.0
COORDINATES: protein motif:HMM:NF017277.2
COORDINATES: protein motif:HMM:NF013391.2
COORDINATES: protein motif:HMM:NF016972.2
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:TIGR00401.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF024969.2
COORDINATES: protein motif:HMM:NF019522.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:TIGR03570.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014035.2
COORDINATES: protein motif:HMM:NF012529.2
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF021367.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713937.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:TIGR00639.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: protein motif:HMM:TIGR01357.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02074.1
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017727.2
COORDINATES: protein motif:HMM:NF005143.0
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:TIGR00557.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: protein motif:HMM:NF016348.2
GO:0061024 - membrane organization [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01499.1
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
COORDINATES: protein motif:HMM:TIGR00515.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011713952.1
GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011713953.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: protein motif:HMM:TIGR00234.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF007148.0
COORDINATES: protein motif:HMM:NF003967.1
COORDINATES: similar to AA sequence:RefSeq:WP_008036689.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_011714927.1
COORDINATES: similar to AA sequence:RefSeq:WP_003087298.1
cbb3-type cytochrome c oxidase subunit 3
COORDINATES: protein motif:HMM:NF017559.2
COORDINATES: protein motif:HMM:TIGR02745.1
GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
cytochrome c oxidase accessory protein CcoG
COORDINATES: similar to AA sequence:RefSeq:WP_009425113.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
cytochrome-c oxidase, cbb3-type subunit I
COORDINATES: protein motif:HMM:NF011055.0
cytochrome-c oxidase, cbb3-type subunit II
COORDINATES: protein motif:HMM:TIGR00782.1
cytochrome-c oxidase, cbb3-type subunit III
COORDINATES: protein motif:HMM:NF040078.1
COORDINATES: protein motif:HMM:NF014325.2
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004621165.1
cbb3-type cytochrome oxidase assembly protein CcoS
COORDINATES: protein motif:HMM:NF024498.2
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: protein motif:HMM:NF025069.2
COORDINATES: similar to AA sequence:RefSeq:WP_006484041.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF002481.0
GO:0016645 - oxidoreductase activity, acting on the CH-NH group of donors [Evidence IEA]; GO:0004808 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity [Evidence IEA]
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
hydrogen peroxide-inducible genes activator
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: protein motif:HMM:NF013427.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020909986.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008750.0
COORDINATES: protein motif:HMM:NF017868.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714012.1
COORDINATES: protein motif:HMM:NF006914.0
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_000179874.1
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015912827.1
COORDINATES: protein motif:HMM:NF013491.2
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01534.1
COORDINATES: protein motif:HMM:NF024968.2
COORDINATES: protein motif:HMM:NF016800.2
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:NF015087.2
COORDINATES: similar to AA sequence:RefSeq:WP_016292049.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
COORDINATES: protein motif:HMM:TIGR03588.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: similar to AA sequence:RefSeq:WP_020044630.1
GO:0070567 - cytidylyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02201.1
putative lipopolysaccharide heptosyltransferase III
COORDINATES: protein motif:HMM:TIGR04396.1
COORDINATES: protein motif:HMM:NF038364.1
AglZ/HisF2 family acetamidino modification protein
COORDINATES: protein motif:HMM:TIGR03573.1
COORDINATES: protein motif:HMM:TIGR01855.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: protein motif:HMM:NF015262.2
COORDINATES: protein motif:HMM:TIGR04357.1
COORDINATES: protein motif:HMM:TIGR00704.1
COORDINATES: protein motif:HMM:NF015451.2
COORDINATES: protein motif:HMM:NF013401.2
COORDINATES: similar to AA sequence:RefSeq:WP_002220108.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003766.0
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021616.2
GGDEF domain-containing phosphodiesterase
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF033749.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714626.1
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: protein motif:HMM:TIGR00158.1
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: similar to AA sequence:RefSeq:WP_009805008.1
COORDINATES: protein motif:HMM:NF012651.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00166.1
COORDINATES: protein motif:HMM:TIGR00726.1
COORDINATES: protein motif:HMM:NF040327.1
COORDINATES: protein motif:HMM:TIGR00195.1
GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024724.2
COORDINATES: protein motif:HMM:TIGR02281.1
TIGR02281 family clan AA aspartic protease
COORDINATES: protein motif:HMM:NF003433.0
GO:0000103 - sulfate assimilation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016450861.1
COORDINATES: protein motif:HMM:NF020084.2
FIST C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF039989.1
COORDINATES: protein motif:HMM:NF016260.2
translocation/assembly module TamB domain-containing protein
COORDINATES: protein motif:HMM:NF013283.2
COORDINATES: protein motif:HMM:NF013918.2
ferric reductase-like transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF003767.0
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
protein-methionine-sulfoxide reductase catalytic subunit MsrP
COORDINATES: protein motif:HMM:TIGR02124.1
hydrogenase expression/formation protein HypE
COORDINATES: protein motif:HMM:NF014034.2
COORDINATES: protein motif:HMM:TIGR00073.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: protein motif:HMM:TIGR00100.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: protein motif:HMM:TIGR00074.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:NF012696.2
nickel-dependent hydrogenase large subunit
COORDINATES: protein motif:HMM:NF020037.2
COORDINATES: protein motif:HMM:NF023365.2
[NiFe]-hydrogenase assembly chaperone HybE
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: protein motif:HMM:TIGR00140.1
HyaD/HybD family hydrogenase maturation endopeptidase
COORDINATES: protein motif:HMM:NF008133.0
COORDINATES: protein motif:HMM:NF008134.0
COORDINATES: protein motif:HMM:TIGR00391.1
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: protein motif:HMM:NF013346.2
COORDINATES: protein motif:HMM:NF019481.2
COORDINATES: protein motif:HMM:NF017280.2
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: protein motif:HMM:NF008738.0
GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF000658.1
COORDINATES: protein motif:HMM:TIGR01413.1
COORDINATES: similar to AA sequence:RefSeq:WP_003094815.1
COORDINATES: protein motif:HMM:NF013694.2
COORDINATES: protein motif:HMM:NF013434.2
glycerol-3-phosphate dehydrogenase/oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_011714151.1
pyrimidine/purine nucleoside phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_009698244.1
zinc ribbon domain-containing protein YjdM
COORDINATES: similar to AA sequence:RefSeq:WP_011713812.1
COORDINATES: protein motif:HMM:TIGR01056.1
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714166.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714358.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714426.1
IS256-like element ISMama1 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_011713006.1
COORDINATES: protein motif:HMM:TIGR02384.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: protein motif:HMM:TIGR02385.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: protein motif:HMM:NF027074.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611188.1
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713041.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612068.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611353.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713700.1
COORDINATES: protein motif:HMM:NF016921.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714256.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714413.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_011714414.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714415.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714416.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714417.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714261.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714263.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714222.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714223.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712961.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712018.1
COORDINATES: protein motif:HMM:NF013502.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712889.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714349.1
COORDINATES: protein motif:HMM:NF013725.2
COORDINATES: protein motif:HMM:NF013308.2
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_000488386.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: protein motif:HMM:NF016267.2
COORDINATES: protein motif:HMM:NF002073.0
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO:0019538 - protein metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04407.1
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter permease LptF
COORDINATES: protein motif:HMM:TIGR04408.1
LPS export ABC transporter permease LptG
COORDINATES: protein motif:HMM:NF016270.2
COORDINATES: protein motif:HMM:NF025221.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF024589.2
COORDINATES: similar to AA sequence:RefSeq:WP_004921639.1
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: similar to AA sequence:RefSeq:WP_011939720.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712801.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712956.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712950.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712949.1
COORDINATES: protein motif:HMM:NF018357.2
COORDINATES: protein motif:HMM:NF016358.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713015.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714373.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712923.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713699.1
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714481.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714482.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714167.1
COORDINATES: protein motif:HMM:NF033580.1
COORDINATES: protein motif:HMM:NF024736.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714425.1
COORDINATES: similar to AA sequence:RefSeq:WP_023075031.1
COORDINATES: protein motif:HMM:NF024436.2
penicillin-binding protein activator LpoB
COORDINATES: similar to AA sequence:RefSeq:WP_011714311.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712941.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712936.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713679.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713685.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714662.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712973.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714215.1
COORDINATES: protein motif:HMM:NF015642.2
COORDINATES: protein motif:HMM:NF024886.2
COORDINATES: protein motif:HMM:NF016847.2
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: similar to AA sequence:RefSeq:WP_041531465.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712945.1
COORDINATES: protein motif:HMM:NF024861.2
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: protein motif:HMM:NF017355.2
toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_010952670.1
COORDINATES: similar to AA sequence:RefSeq:WP_010952669.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712926.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712920.1
COORDINATES: similar to AA sequence:RefSeq:WP_011712918.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713698.1
COORDINATES: protein motif:HMM:NF020811.2
GO:0016817 - hydrolase activity, acting on acid anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF039802.1
COORDINATES: protein motif:HMM:NF037510.2
COORDINATES: protein motif:HMM:NF016896.2
COORDINATES: protein motif:HMM:NF024870.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714354.1
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: protein motif:HMM:TIGR01490.1
COORDINATES: protein motif:HMM:NF025637.2
COORDINATES: protein motif:HMM:TIGR02352.1
GO:0016647 - oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF019966.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714493.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_015478234.1
COORDINATES: protein motif:HMM:NF013996.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713357.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714520.1
COORDINATES: protein motif:HMM:NF013607.2
COORDINATES: protein motif:HMM:NF007528.0
COORDINATES: protein motif:HMM:NF033735.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006006 - glucose metabolic process [Evidence IEA]
ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF033734.1
organoarsenical effux MFS transporter ArsJ
COORDINATES: protein motif:HMM:NF015500.2
COORDINATES: protein motif:HMM:NF038011.1
COORDINATES: protein motif:HMM:NF028243.2
COORDINATES: similar to AA sequence:RefSeq:WP_012316140.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714548.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_012970307.1
COORDINATES: protein motif:HMM:NF024892.2
COORDINATES: protein motif:HMM:TIGR04490.1
COORDINATES: protein motif:HMM:NF016292.2
ABC transporter substrate binding protein
COORDINATES: protein motif:HMM:NF017319.2
COORDINATES: protein motif:HMM:NF016236.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:TIGR00042.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_000743900.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003226803.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714571.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714572.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF003671.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012053752.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: protein motif:HMM:NF024578.2
COORDINATES: protein motif:HMM:TIGR00230.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008035519.1
COORDINATES: protein motif:HMM:NF002872.1
COORDINATES: protein motif:HMM:NF025890.2
COORDINATES: protein motif:HMM:NF013179.2
COORDINATES: protein motif:HMM:NF016850.2
COORDINATES: protein motif:HMM:NF013479.2
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:NF005413.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:TIGR03499.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01398.1
COORDINATES: protein motif:HMM:NF021361.2
COORDINATES: protein motif:HMM:NF018485.2
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: protein motif:HMM:NF015552.2
COORDINATES: protein motif:HMM:NF037410.2
COORDINATES: protein motif:HMM:NF037411.2
COORDINATES: similar to AA sequence:RefSeq:WP_002219288.1
GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006708467.1
COORDINATES: protein motif:HMM:NF003520.0
COORDINATES: protein motif:HMM:TIGR00714.1
COORDINATES: similar to AA sequence:RefSeq:NP_311421.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1
COORDINATES: similar to AA sequence:RefSeq:WP_001295373.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02010.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]
Fe-S cluster assembly transcriptional regulator IscR
COORDINATES: protein motif:HMM:TIGR01172.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024857.2
COORDINATES: protein motif:HMM:NF028468.2
PP2C family protein-serine/threonine phosphatase
COORDINATES: protein motif:HMM:NF022696.2
COORDINATES: protein motif:HMM:TIGR00400.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: similar to AA sequence:RefSeq:WP_011713013.1
COORDINATES: similar to AA sequence:RefSeq:WP_000066495.1
COORDINATES: protein motif:HMM:NF021627.2
COORDINATES: protein motif:HMM:NF009110.0
COORDINATES: protein motif:HMM:TIGR02421.1
flavohemoglobin expression-modulating QEGLA motif protein
COORDINATES: protein motif:HMM:NF016873.2
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016985.2
COORDINATES: protein motif:HMM:TIGR03824.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: protein motif:HMM:NF003676.1
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:NF014195.2
flagellar basal body L-ring protein FlgH
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: similar to AA sequence:RefSeq:WP_050665436.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02490.1
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF017591.2
COORDINATES: protein motif:HMM:NF021189.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714400.1
COORDINATES: protein motif:HMM:NF014626.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714670.1
COORDINATES: protein motif:HMM:NF020509.2
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR01140.1
GO:0048472 - threonine-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011657662.1
COORDINATES: protein motif:HMM:TIGR01466.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: protein motif:HMM:NF023189.2
COORDINATES: protein motif:HMM:TIGR01467.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02467.1
bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase
COORDINATES: protein motif:HMM:NF000849.0
cobalt-precorrin-5B (C(1))-methyltransferase
COORDINATES: protein motif:HMM:NF014612.2
COORDINATES: protein motif:HMM:NF014016.2
COORDINATES: protein motif:HMM:TIGR01465.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002204.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF004905.0
COORDINATES: protein motif:HMM:NF022135.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF025053.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:NF006762.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014610.2
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006489017.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020649368.1
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_011714708.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_000880088.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_011714710.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001611.0
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023395.2
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014754360.1
COORDINATES: protein motif:HMM:NF003965.0
COORDINATES: protein motif:HMM:NF008284.0
COORDINATES: protein motif:HMM:NF002956.0
COORDINATES: protein motif:HMM:NF015927.2
COORDINATES: protein motif:HMM:NF025158.2
COORDINATES: protein motif:HMM:NF015945.2
COORDINATES: protein motif:HMM:NF022182.2
COORDINATES: protein motif:HMM:TIGR03330.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013143.2
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714734.1
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: protein motif:HMM:NF013465.2
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011714743.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02081.1
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01203.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01449.2
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0008152 - metabolic process [Evidence IEA]; GO:0009853 - photorespiration [Evidence IEA]
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702); Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00070.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01195.1
COORDINATES: protein motif:HMM:NF010643.0
GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
sodium-extruding oxaloacetate decarboxylase subunit alpha
COORDINATES: protein motif:HMM:NF015910.2
sodium ion-translocating decarboxylase subunit beta
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:TIGR03943.1
COORDINATES: similar to AA sequence:RefSeq:WP_011806522.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714764.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714765.1
COORDINATES: protein motif:HMM:NF014725.2
COORDINATES: protein motif:HMM:NF012862.2
COORDINATES: protein motif:HMM:TIGR01521.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020045072.1
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: protein motif:HMM:NF005298.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000066707.1
COORDINATES: protein motif:HMM:NF018949.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:NF004939.0
COORDINATES: protein motif:HMM:NF018691.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714812.1
GO:0008914 - leucyltransferase activity [Evidence IEA]
leucyl/phenylalanyl-tRNA--protein transferase
COORDINATES: protein motif:HMM:NF004397.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF037955.1
COORDINATES: protein motif:HMM:TIGR01370.1
COORDINATES: protein motif:HMM:NF013077.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF001278.0
GO:0051073 - adenosylcobinamide-GDP ribazoletransferase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:NF000996.0
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
3'(2'),5'-bisphosphate nucleotidase CysQ
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02420.1
GO:0019899 - enzyme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014910.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: protein motif:HMM:NF009150.0
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: protein motif:HMM:TIGR01291.1
COORDINATES: protein motif:HMM:TIGR00196.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: protein motif:HMM:NF024584.2
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: similar to AA sequence:RefSeq:WP_016292066.1
COORDINATES: protein motif:HMM:NF027286.2
TerB family tellurite resistance protein
COORDINATES: similar to AA sequence:RefSeq:WP_011714872.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: similar to AA sequence:RefSeq:WP_018036870.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714877.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015620.2
COORDINATES: protein motif:HMM:NF004596.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004091254.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF015901.2
COORDINATES: protein motif:HMM:TIGR04409.1
LPS export ABC transporter periplasmic protein LptC
COORDINATES: protein motif:HMM:TIGR01670.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_003134758.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF024773.2
COORDINATES: protein motif:HMM:NF014629.2
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF000840.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011714893.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01027.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714895.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714896.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714897.1
COORDINATES: protein motif:HMM:NF014591.2
COORDINATES: protein motif:HMM:TIGR00049.1
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: protein motif:HMM:NF016301.2
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: protein motif:HMM:NF015823.2
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: protein motif:HMM:TIGR01448.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713966.1
COORDINATES: similar to AA sequence:RefSeq:WP_016445091.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: protein motif:HMM:NF023036.2
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: similar to AA sequence:RefSeq:WP_011714940.1
COORDINATES: protein motif:HMM:NF026945.2
polymorphic toxin type 44 domain-containing protein
COORDINATES: protein motif:HMM:NF033827.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
CDF family Co(II)/Ni(II) efflux transporter DmeF
COORDINATES: protein motif:HMM:TIGR00758.1
COORDINATES: similar to AA sequence:RefSeq:WP_011714718.1
COORDINATES: protein motif:HMM:NF017913.2
phosphate-starvation-inducible PsiE family protein
diverse 7TM receptor, extracellular region 2
COORDINATES: similar to AA sequence:RefSeq:WP_002336979.1
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: protein motif:HMM:NF001862.0
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_011714964.1
GO:0033739 - preQ1 synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714965.1
GO:0051262 - protein tetramerization [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714967.1
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF005574.0
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714971.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: protein motif:HMM:NF001886.0
COORDINATES: protein motif:HMM:NF005737.0
GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]
alpha-D-glucose phosphate-specific phosphoglucomutase
COORDINATES: protein motif:HMM:NF014443.2
COORDINATES: protein motif:HMM:NF007039.0
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011712142.1
COORDINATES: protein motif:HMM:NF014281.2
COORDINATES: protein motif:HMM:NF039960.1
COORDINATES: protein motif:HMM:NF024180.2
COORDINATES: protein motif:HMM:NF013555.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
topoisomerase DNA-binding C4 zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011714992.1
COORDINATES: protein motif:HMM:NF001484.0
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:TIGR01173.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: protein motif:HMM:TIGR01216.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011714999.1
COORDINATES: similar to AA sequence:RefSeq:WP_011715000.1
COORDINATES: similar to AA sequence:RefSeq:WP_011715001.1
COORDINATES: protein motif:HMM:NF012439.2
COORDINATES: protein motif:HMM:NF016102.2
COORDINATES: similar to AA sequence:RefSeq:WP_008034647.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: protein motif:HMM:TIGR00877.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011715009.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:NF013362.2
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF013214.2
COORDINATES: similar to AA sequence:RefSeq:WP_011715014.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011715017.1
COORDINATES: protein motif:HMM:NF015737.2
autotransporter outer membrane beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005123317.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04167.1
Some members of this family are selenoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
arsenosugar biosynthesis radical SAM protein ArsS
COORDINATES: protein motif:HMM:NF004649.0
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: similar to AA sequence:RefSeq:WP_011715025.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF008747.0
COORDINATES: protein motif:HMM:TIGR02504.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: protein motif:HMM:NF013103.2
dTDP-4-dehydrorhamnose 3,5-epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007704556.1
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: protein motif:HMM:NF014132.2
SCP2 sterol-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR01982.1
GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF001159.1
COORDINATES: protein motif:HMM:NF025116.2
COORDINATES: protein motif:HMM:TIGR01189.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0015439 - ABC-type heme transporter activity [Evidence IEA]
GO:0015886 - heme transport [Evidence IEA]
heme ABC exporter ATP-binding protein CcmA
COORDINATES: protein motif:HMM:NF015344.2
GO:0015232 - heme transmembrane transporter activity [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0015886 - heme transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01191.1
COORDINATES: protein motif:HMM:NF009727.0
COORDINATES: protein motif:HMM:NF007691.0
COORDINATES: protein motif:HMM:TIGR00385.1
DsbE family thiol:disulfide interchange protein
COORDINATES: protein motif:HMM:NF015853.2
cytochrome c-type biogenesis protein CcmH
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: protein motif:HMM:NF039309.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: protein motif:HMM:NF016623.2
divergent polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: similar to AA sequence:RefSeq:WP_011715052.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:TIGR02472.1
COORDINATES: protein motif:HMM:NF022036.2
GO:0004089 - carbonate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01587.1
CRISPR-associated helicase/endonuclease Cas3
COORDINATES: similar to AA sequence:RefSeq:WP_016293318.1
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-C CRISPR-associated protein Cas5c
COORDINATES: protein motif:HMM:TIGR01863.1
type I-C CRISPR-associated protein Cas8c/Csd1
COORDINATES: protein motif:HMM:TIGR02589.1
type I-C CRISPR-associated protein Cas7/Csd2
COORDINATES: protein motif:HMM:TIGR00372.1
COORDINATES: protein motif:HMM:TIGR03640.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-C CRISPR-associated endonuclease Cas1c
COORDINATES: similar to AA sequence:RefSeq:WP_002280569.1
COORDINATES: protein motif:HMM:TIGR01710.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
type II secretion system major pseudopilin GspG
COORDINATES: protein motif:HMM:NF002677.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019845.2
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF025173.2
COORDINATES: protein motif:HMM:NF019265.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF024890.2
COORDINATES: protein motif:HMM:TIGR02944.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
SUF system Fe-S cluster assembly regulator
COORDINATES: protein motif:HMM:NF002205.0
GO:0008832 - dGTPase activity [Evidence IEA]
GO:0006203 - dGTP catabolic process [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_020044343.1
COORDINATES: protein motif:HMM:NF012596.2
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF006030.0
COORDINATES: protein motif:HMM:NF009586.0
COORDINATES: protein motif:HMM:NF017519.2
YiiX/YebB-like N1pC/P60 family cysteine hydrolase
COORDINATES: protein motif:HMM:TIGR01778.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01352.1
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01230.1
GO:0008783 - agmatinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009438.0
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:NF016250.2
COORDINATES: protein motif:HMM:TIGR02480.1
COORDINATES: protein motif:HMM:TIGR01397.1
COORDINATES: protein motif:HMM:NF015693.2
flagellar basal body-associated FliL family protein
COORDINATES: protein motif:HMM:TIGR03506.1
COORDINATES: protein motif:HMM:NF025230.2
COORDINATES: protein motif:HMM:NF015047.2
COORDINATES: similar to AA sequence:RefSeq:WP_011712746.1
COORDINATES: similar to AA sequence:RefSeq:WP_003091727.1
COORDINATES: protein motif:HMM:TIGR03594.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03300.1
outer membrane protein assembly factor BamB
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011715132.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:NF024855.2
COORDINATES: protein motif:HMM:NF010588.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: protein motif:HMM:NF012385.2
COORDINATES: protein motif:HMM:TIGR02098.1
COORDINATES: protein motif:HMM:TIGR02673.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00439.2
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_011715149.1
COORDINATES: protein motif:HMM:NF001503.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00479.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_011715158.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014673.2
COORDINATES: similar to AA sequence:RefSeq:WP_011715161.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoN
COORDINATES: protein motif:HMM:NF004499.0
COORDINATES: protein motif:HMM:NF005141.0
COORDINATES: similar to AA sequence:RefSeq:WP_011715164.1
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: protein motif:HMM:NF005164.0
COORDINATES: similar to AA sequence:RefSeq:WP_011715166.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoI
COORDINATES: similar to AA sequence:RefSeq:WP_011715167.1
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: protein motif:HMM:TIGR01973.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
GO:0006120 - mitochondrial electron transport, NADH to ubiquinone [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoG
COORDINATES: similar to AA sequence:RefSeq:WP_018052520.1
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: protein motif:HMM:NF005725.0
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: similar to AA sequence:RefSeq:WP_011715171.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01961.1
COORDINATES: similar to AA sequence:RefSeq:WP_011715173.1
COORDINATES: similar to AA sequence:RefSeq:WP_012748607.1
COORDINATES: protein motif:HMM:NF024994.2
COORDINATES: protein motif:HMM:NF027440.2
COORDINATES: protein motif:HMM:NF008053.0
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011715179.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_011715180.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011715183.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: protein motif:HMM:NF021613.2
COORDINATES: similar to AA sequence:RefSeq:WP_014578420.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003210966.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012951.2
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011715192.1
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: protein motif:HMM:TIGR00112.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00044.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1
COORDINATES: protein motif:HMM:TIGR01051.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00023.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: protein motif:HMM:NF024967.2
COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF008149.0
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: protein motif:HMM:TIGR03598.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:TIGR00737.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01818.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF021073.2
COORDINATES: protein motif:HMM:NF004482.0
COORDINATES: protein motif:HMM:NF012365.2
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01144.1
COORDINATES: protein motif:HMM:TIGR01436.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011715220.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04211.1
TIGR04211 family SH3 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011715222.1
electron-transfer flavoprotein:ubiquinone oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_000974820.1
COORDINATES: similar to AA sequence:RefSeq:WP_011715227.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008332965.1
GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014646.2
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: protein motif:HMM:NF013633.2
RNA-binding S4 domain-containing protein
COORDINATES: protein motif:HMM:TIGR00253.1
ribosome assembly RNA-binding protein YhbY
COORDINATES: protein motif:HMM:NF017026.2
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:NF017243.2
COORDINATES: protein motif:HMM:TIGR00268.1
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:NF019334.2
COORDINATES: similar to AA sequence:RefSeq:WP_011715250.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_011713560.1
COORDINATES: similar to AA sequence:RefSeq:WP_011713561.1
COORDINATES: protein motif:HMM:NF012888.2
COORDINATES: similar to AA sequence:RefSeq:WP_011715259.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016351.2
COORDINATES: similar to AA sequence:RefSeq:WP_011715264.1
COORDINATES: protein motif:HMM:NF016204.2
COORDINATES: protein motif:HMM:TIGR01953.1
COORDINATES: protein motif:HMM:NF014617.2
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012077941.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014029189.1
COORDINATES: protein motif:HMM:NF013720.2
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010929614.1
COORDINATES: protein motif:HMM:TIGR00652.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01048.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011715278.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011715279.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF001986.0
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002325.0
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011737635.1
COORDINATES: protein motif:HMM:NF023522.2
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF018290.2
COORDINATES: protein motif:HMM:TIGR00138.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_011715292.1
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:NF003661.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: protein motif:HMM:NF002353.0
GO:0032977 - membrane insertase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011715295.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011715297.1