Bacillus toyonensis strain P18 plasmid pBtP18, complete sequence.
Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.
Characterization of a deep sea Bacillus toyonensis isolate: Genomic and pathogenic features
Submitted (16-NOV-2020) Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao 266071, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP064876.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2.3\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 120.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/10/2022 02:16:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 5,878\nCDSs (total) :: 5,725\nGenes (coding) :: 5,534\nCDSs (with protein) :: 5,534\nGenes (RNA) :: 153\nrRNAs :: 14, 14, 14 (5S, 16S, 23S)\ncomplete rRNAs :: 14, 14, 14 (5S, 16S, 23S)\ntRNAs :: 106\nncRNAs :: 5\nPseudo Genes (total) :: 191\nCDSs (without protein) :: 191\nPseudo Genes (ambiguous residues) :: 0 of 191\nPseudo Genes (frameshifted) :: 80 of 191\nPseudo Genes (incomplete) :: 109 of 191\nPseudo Genes (internal stop) :: 60 of 191\nPseudo Genes (multiple problems) :: 50 of 191\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_000831897.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
aminoglycoside phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006097282.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016090980.1
COORDINATES: similar to AA sequence:RefSeq:WP_006097509.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002172596.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_000028472.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002150745.1
COORDINATES: similar to AA sequence:RefSeq:WP_003192776.1
COORDINATES: similar to AA sequence:RefSeq:WP_003722224.1
COORDINATES: similar to AA sequence:RefSeq:WP_000171966.1
COORDINATES: similar to AA sequence:RefSeq:WP_002128234.1
COORDINATES: similar to AA sequence:RefSeq:WP_001189868.1
COORDINATES: similar to AA sequence:RefSeq:WP_000715386.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_000665062.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002137131.1
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002137130.1
COORDINATES: similar to AA sequence:RefSeq:WP_002137128.1
COORDINATES: similar to AA sequence:RefSeq:WP_002137126.1
COORDINATES: similar to AA sequence:RefSeq:WP_000609159.1
COORDINATES: similar to AA sequence:RefSeq:WP_016090861.1
IS200/IS605 family element RNA-guided endonuclease TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_001043938.1
COORDINATES: similar to AA sequence:RefSeq:WP_000273025.1
COORDINATES: similar to AA sequence:RefSeq:WP_016091877.1
putative mucin/carbohydrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000843833.1
COORDINATES: similar to AA sequence:RefSeq:WP_001059759.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000384580.1
COORDINATES: similar to AA sequence:RefSeq:WP_016122022.1
COORDINATES: similar to AA sequence:RefSeq:WP_001092330.1
COORDINATES: similar to AA sequence:RefSeq:WP_016135652.1
COORDINATES: similar to AA sequence:RefSeq:WP_016082837.1
COORDINATES: similar to AA sequence:RefSeq:WP_000144189.1
COORDINATES: similar to AA sequence:RefSeq:WP_000746553.1
COORDINATES: similar to AA sequence:RefSeq:WP_015945607.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002137453.1
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002189634.1
COORDINATES: similar to AA sequence:RefSeq:WP_002166754.1
COORDINATES: similar to AA sequence:RefSeq:WP_016093726.1
COORDINATES: similar to AA sequence:RefSeq:WP_016095392.1
COORDINATES: similar to AA sequence:RefSeq:WP_000028493.1
COORDINATES: similar to AA sequence:RefSeq:WP_000758840.1
COORDINATES: similar to AA sequence:RefSeq:WP_000788514.1
COORDINATES: similar to AA sequence:RefSeq:WP_016095007.1
GO:0006378 - mRNA polyadenylation [Evidence IEA]; GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001044748.1
COORDINATES: protein motif:HMM:NF018933.2
COORDINATES: similar to AA sequence:RefSeq:WP_019390686.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_000801531.1
COORDINATES: similar to AA sequence:RefSeq:WP_000556075.1
COORDINATES: similar to AA sequence:RefSeq:WP_006097059.1
COORDINATES: similar to AA sequence:RefSeq:WP_016094024.1
COORDINATES: similar to AA sequence:RefSeq:WP_000144200.1
COORDINATES: similar to AA sequence:RefSeq:WP_001019124.1
COORDINATES: similar to AA sequence:RefSeq:WP_000413189.1
COORDINATES: similar to AA sequence:RefSeq:WP_016128547.1
COORDINATES: similar to AA sequence:RefSeq:WP_000013338.1
alpha/beta-type small acid-soluble spore protein
COORDINATES: similar to AA sequence:RefSeq:WP_000091042.1
COORDINATES: similar to AA sequence:RefSeq:WP_000255794.1
COORDINATES: similar to AA sequence:RefSeq:WP_000014358.1
COORDINATES: similar to AA sequence:RefSeq:WP_001082101.1
COORDINATES: similar to AA sequence:RefSeq:WP_000433513.1
COORDINATES: similar to AA sequence:RefSeq:WP_000844537.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_000180149.1
COORDINATES: similar to AA sequence:RefSeq:WP_003244436.1
cytochrome P450, cyclodipeptide synthase-associated
COORDINATES: similar to AA sequence:RefSeq:WP_017658172.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001032352.1
COORDINATES: similar to AA sequence:RefSeq:WP_001082482.1
COORDINATES: similar to AA sequence:RefSeq:WP_003202991.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000189823.1
COORDINATES: similar to AA sequence:RefSeq:WP_000360812.1
COORDINATES: similar to AA sequence:RefSeq:WP_016082849.1
COORDINATES: similar to AA sequence:RefSeq:WP_011733094.1
COORDINATES: similar to AA sequence:RefSeq:WP_018392498.1
COORDINATES: similar to AA sequence:RefSeq:WP_000728406.1
COORDINATES: similar to AA sequence:RefSeq:WP_016130606.1
COORDINATES: similar to AA sequence:RefSeq:WP_002191445.1
COORDINATES: similar to AA sequence:RefSeq:WP_000702509.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000158811.1
COORDINATES: similar to AA sequence:RefSeq:WP_016119283.1
hybrid sensor histidine kinase/response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_000720908.1
COORDINATES: similar to AA sequence:RefSeq:WP_000407086.1
COORDINATES: similar to AA sequence:RefSeq:WP_000580037.1
COORDINATES: similar to AA sequence:RefSeq:WP_001035094.1
COORDINATES: similar to AA sequence:RefSeq:WP_000798889.1
COORDINATES: protein motif:HMM:NF015368.2
COORDINATES: similar to AA sequence:RefSeq:WP_000483291.1
COORDINATES: similar to AA sequence:RefSeq:WP_003193611.1
COORDINATES: similar to AA sequence:RefSeq:WP_002109867.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_086558357.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019910897.1
COORDINATES: similar to AA sequence:RefSeq:WP_000621313.1
COORDINATES: similar to AA sequence:RefSeq:WP_016082880.1
COORDINATES: similar to AA sequence:RefSeq:WP_000050948.1
COORDINATES: similar to AA sequence:RefSeq:WP_000525919.1
COORDINATES: similar to AA sequence:RefSeq:WP_000378653.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_000957741.1
COORDINATES: similar to AA sequence:RefSeq:WP_001075395.1
COORDINATES: similar to AA sequence:RefSeq:WP_002101034.1
COORDINATES: similar to AA sequence:RefSeq:WP_000064065.1
COORDINATES: similar to AA sequence:RefSeq:WP_000064082.1
COORDINATES: similar to AA sequence:RefSeq:WP_016083312.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016135619.1
COORDINATES: similar to AA sequence:RefSeq:WP_000828030.1
COORDINATES: protein motif:HMM:NF025768.2
COORDINATES: similar to AA sequence:RefSeq:WP_006097344.1
COORDINATES: similar to AA sequence:RefSeq:WP_000724354.1
COORDINATES: similar to AA sequence:RefSeq:WP_000105168.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002165213.1
COORDINATES: similar to AA sequence:RefSeq:WP_012094327.1
COORDINATES: similar to AA sequence:RefSeq:WP_000401862.1
COORDINATES: similar to AA sequence:RefSeq:WP_002205123.1
COORDINATES: similar to AA sequence:RefSeq:WP_016130592.1
COORDINATES: similar to AA sequence:RefSeq:WP_001078035.1
COORDINATES: protein motif:HMM:NF013795.2
COORDINATES: similar to AA sequence:RefSeq:WP_000433036.1
COORDINATES: similar to AA sequence:RefSeq:WP_002175928.1
COORDINATES: similar to AA sequence:RefSeq:WP_020062210.1
COORDINATES: similar to AA sequence:RefSeq:WP_020062209.1
MauE/DoxX family redox-associated membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_001291971.1
COORDINATES: similar to AA sequence:RefSeq:WP_000919786.1
COORDINATES: similar to AA sequence:RefSeq:WP_016078444.1
COORDINATES: similar to AA sequence:RefSeq:WP_002169385.1
phosphodiester glycosidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000755605.1
COORDINATES: similar to AA sequence:RefSeq:WP_000022496.1
COORDINATES: similar to AA sequence:RefSeq:WP_000866042.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001156574.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000288159.1
GO:0003870 - 5-aminolevulinate synthase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000443215.1
COORDINATES: similar to AA sequence:RefSeq:WP_016128575.1
COORDINATES: similar to AA sequence:RefSeq:WP_010501787.1
COORDINATES: similar to AA sequence:RefSeq:WP_000444184.1
COORDINATES: similar to AA sequence:RefSeq:WP_000443109.1
COORDINATES: similar to AA sequence:RefSeq:WP_001227607.1
COORDINATES: similar to AA sequence:RefSeq:WP_011040476.1
COORDINATES: similar to AA sequence:RefSeq:WP_000456803.1
COORDINATES: similar to AA sequence:RefSeq:WP_000586618.1
COORDINATES: similar to AA sequence:RefSeq:WP_016090628.1
COORDINATES: similar to AA sequence:RefSeq:WP_012259799.1
GO:0047150 - betaine-homocysteine S-methyltransferase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000428523.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_000546724.1
COORDINATES: similar to AA sequence:RefSeq:WP_000390268.1
COORDINATES: similar to AA sequence:RefSeq:WP_003308482.1
COORDINATES: similar to AA sequence:RefSeq:WP_000249475.1
COORDINATES: similar to AA sequence:RefSeq:WP_000659525.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001187350.1
COORDINATES: similar to AA sequence:RefSeq:WP_016082900.1
COORDINATES: similar to AA sequence:RefSeq:WP_016082901.1
COORDINATES: similar to AA sequence:RefSeq:WP_000925323.1
COORDINATES: similar to AA sequence:RefSeq:WP_016093704.1
COORDINATES: similar to AA sequence:RefSeq:WP_016130642.1
COORDINATES: similar to AA sequence:RefSeq:WP_002169373.1
COORDINATES: similar to AA sequence:RefSeq:WP_000772271.1
COORDINATES: similar to AA sequence:RefSeq:WP_016092669.1
COORDINATES: similar to AA sequence:RefSeq:WP_000516296.1
COORDINATES: similar to AA sequence:RefSeq:WP_002012858.1
COORDINATES: similar to AA sequence:RefSeq:WP_000073386.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000884084.1
GO:0009058 - biosynthetic process [Evidence IEA]
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016107723.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_000679359.1
COORDINATES: similar to AA sequence:RefSeq:WP_000251215.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_000699373.1
COORDINATES: similar to AA sequence:RefSeq:WP_000465157.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_001280556.1
CDP-glycerol glycerophosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_001124404.1
COORDINATES: similar to AA sequence:RefSeq:WP_001183019.1
COORDINATES: similar to AA sequence:RefSeq:WP_000116974.1
COORDINATES: similar to AA sequence:RefSeq:WP_000724106.1
COORDINATES: similar to AA sequence:RefSeq:WP_000481867.1
COORDINATES: similar to AA sequence:RefSeq:WP_002016635.1
COORDINATES: similar to AA sequence:RefSeq:WP_053400514.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002147867.1
COORDINATES: similar to AA sequence:RefSeq:WP_000524418.1
COORDINATES: similar to AA sequence:RefSeq:WP_002026152.1
COORDINATES: similar to AA sequence:RefSeq:WP_000442699.1
COORDINATES: similar to AA sequence:RefSeq:WP_000413415.1
GO:0015333 - peptide:proton symporter activity [Evidence IEA]
GO:0015833 - peptide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016078412.1
COORDINATES: similar to AA sequence:RefSeq:WP_000053714.1
COORDINATES: similar to AA sequence:RefSeq:WP_001054346.1
COORDINATES: similar to AA sequence:RefSeq:WP_002162024.1
COORDINATES: similar to AA sequence:RefSeq:WP_017658211.1
COORDINATES: similar to AA sequence:RefSeq:WP_002169375.1
COORDINATES: similar to AA sequence:RefSeq:WP_000217983.1
COORDINATES: similar to AA sequence:RefSeq:WP_000721406.1
Phr family secreted Rap phosphatase inhibitor
COORDINATES: similar to AA sequence:RefSeq:WP_000104996.1
COORDINATES: similar to AA sequence:RefSeq:WP_000034799.1
FtsW/RodA/SpoVE family cell cycle protein
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: similar to AA sequence:RefSeq:WP_000900820.1
COORDINATES: similar to AA sequence:RefSeq:WP_001131823.1
COORDINATES: similar to AA sequence:RefSeq:WP_000471977.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001195343.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_016136259.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_001068606.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001101872.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000991326.1
COORDINATES: similar to AA sequence:RefSeq:WP_000805134.1
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF024997.2
COORDINATES: protein motif:HMM:NF024700.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016135853.1
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002150833.1
COORDINATES: protein motif:HMM:NF037411.2
COORDINATES: similar to AA sequence:RefSeq:WP_002480253.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016091965.1
COORDINATES: similar to AA sequence:RefSeq:WP_001053257.1
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611090.1
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: protein motif:HMM:NF025027.2
COORDINATES: similar to AA sequence:RefSeq:WP_017150901.1
COORDINATES: similar to AA sequence:RefSeq:WP_004401941.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025669.2
COORDINATES: similar to AA sequence:RefSeq:WP_012259872.1
COORDINATES: protein motif:HMM:NF013232.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF037912.2
COORDINATES: similar to AA sequence:RefSeq:WP_002193374.1
COORDINATES: similar to AA sequence:RefSeq:WP_007203452.1
COORDINATES: similar to AA sequence:RefSeq:WP_000389842.1
COORDINATES: similar to AA sequence:RefSeq:WP_000282130.1
COORDINATES: similar to AA sequence:RefSeq:WP_017657328.1
COORDINATES: similar to AA sequence:RefSeq:WP_002004565.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017152747.1
COORDINATES: similar to AA sequence:RefSeq:WP_003209465.1
COORDINATES: similar to AA sequence:RefSeq:WP_017657979.1
COORDINATES: similar to AA sequence:RefSeq:WP_001279434.1
COORDINATES: similar to AA sequence:RefSeq:WP_000841662.1
COORDINATES: similar to AA sequence:RefSeq:WP_016098197.1
COORDINATES: similar to AA sequence:RefSeq:WP_016098196.1
COORDINATES: similar to AA sequence:RefSeq:WP_006915012.1
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_001167935.1
COORDINATES: similar to AA sequence:RefSeq:WP_001090549.1
COORDINATES: similar to AA sequence:RefSeq:WP_016098195.1
COORDINATES: similar to AA sequence:RefSeq:WP_002164576.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000781408.1
COORDINATES: similar to AA sequence:RefSeq:WP_000177372.1
COORDINATES: similar to AA sequence:RefSeq:WP_000155448.1
COORDINATES: similar to AA sequence:RefSeq:WP_001125259.1
COORDINATES: similar to AA sequence:RefSeq:WP_000461692.1
COORDINATES: similar to AA sequence:RefSeq:WP_000900867.1
COORDINATES: similar to AA sequence:RefSeq:WP_000369000.1
COORDINATES: similar to AA sequence:RefSeq:WP_000926109.1
COORDINATES: similar to AA sequence:RefSeq:WP_000423572.1
COORDINATES: similar to AA sequence:RefSeq:WP_001201728.1
COORDINATES: similar to AA sequence:RefSeq:WP_000700198.1
COORDINATES: similar to AA sequence:RefSeq:WP_001229379.1
COORDINATES: similar to AA sequence:RefSeq:WP_001140068.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_016098075.1
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000998965.1
COORDINATES: similar to AA sequence:RefSeq:WP_000505914.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000655296.1
COORDINATES: similar to AA sequence:RefSeq:WP_001125914.1
COORDINATES: similar to AA sequence:RefSeq:WP_000331173.1
COORDINATES: similar to AA sequence:RefSeq:WP_000350105.1
COORDINATES: similar to AA sequence:RefSeq:WP_000602965.1
COORDINATES: similar to AA sequence:RefSeq:WP_001111328.1
COORDINATES: similar to AA sequence:RefSeq:WP_000345538.1
COORDINATES: similar to AA sequence:RefSeq:WP_000537243.1
COORDINATES: similar to AA sequence:RefSeq:WP_006916871.1
COORDINATES: similar to AA sequence:RefSeq:WP_000071626.1
COORDINATES: similar to AA sequence:RefSeq:WP_000052789.1
COORDINATES: similar to AA sequence:RefSeq:WP_001146342.1
COORDINATES: similar to AA sequence:RefSeq:WP_001146340.1
COORDINATES: similar to AA sequence:RefSeq:WP_001229389.1
COORDINATES: similar to AA sequence:RefSeq:WP_000601028.1
COORDINATES: similar to AA sequence:RefSeq:WP_001145944.1
COORDINATES: similar to AA sequence:RefSeq:WP_000007798.1
COORDINATES: similar to AA sequence:RefSeq:WP_000057634.1
COORDINATES: similar to AA sequence:RefSeq:WP_016098064.1
COORDINATES: similar to AA sequence:RefSeq:WP_001126624.1
COORDINATES: similar to AA sequence:RefSeq:WP_000068593.1
S-layer homology domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000217797.1
COORDINATES: similar to AA sequence:RefSeq:WP_000743719.1
COORDINATES: similar to AA sequence:RefSeq:WP_000004088.1
COORDINATES: similar to AA sequence:RefSeq:WP_000077127.1
COORDINATES: similar to AA sequence:RefSeq:WP_000465973.1
COORDINATES: similar to AA sequence:RefSeq:WP_001048700.1
COORDINATES: similar to AA sequence:RefSeq:WP_001008317.1
COORDINATES: similar to AA sequence:RefSeq:WP_000764204.1
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001030564.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000477255.1
COORDINATES: similar to AA sequence:RefSeq:WP_003192947.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_000495046.1
COORDINATES: similar to AA sequence:RefSeq:WP_000915095.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016514171.1
COORDINATES: similar to AA sequence:RefSeq:WP_002203238.1
COORDINATES: similar to AA sequence:RefSeq:WP_000219734.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611514.1
COORDINATES: similar to AA sequence:RefSeq:WP_000446288.1
COORDINATES: similar to AA sequence:RefSeq:WP_016090591.1
COORDINATES: similar to AA sequence:RefSeq:WP_002164329.1
COORDINATES: similar to AA sequence:RefSeq:WP_016119187.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_016083124.1
COORDINATES: similar to AA sequence:RefSeq:WP_016078263.1
COORDINATES: similar to AA sequence:RefSeq:WP_002204063.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002087564.1
COORDINATES: similar to AA sequence:RefSeq:WP_002087565.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_002087566.1
COORDINATES: similar to AA sequence:RefSeq:WP_002014099.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012094838.1
COORDINATES: similar to AA sequence:RefSeq:WP_001160625.1
COORDINATES: similar to AA sequence:RefSeq:WP_002175020.1
COORDINATES: similar to AA sequence:RefSeq:WP_016136174.1
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000169645.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_000280048.1
COORDINATES: similar to AA sequence:RefSeq:WP_001009605.1
GO:0031012 - extracellular matrix [Evidence IEA]
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000949364.1
COORDINATES: similar to AA sequence:RefSeq:WP_000971487.1
COORDINATES: similar to AA sequence:RefSeq:WP_000688773.1
COORDINATES: similar to AA sequence:RefSeq:WP_016107592.1
COORDINATES: similar to AA sequence:RefSeq:WP_016107591.1
COORDINATES: similar to AA sequence:RefSeq:WP_000497659.1
COORDINATES: similar to AA sequence:RefSeq:WP_000447836.1
COORDINATES: similar to AA sequence:RefSeq:WP_002187445.1
COORDINATES: similar to AA sequence:RefSeq:WP_014990782.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002200383.1
COORDINATES: similar to AA sequence:RefSeq:WP_002150944.1
COORDINATES: similar to AA sequence:RefSeq:WP_016117937.1
COORDINATES: similar to AA sequence:RefSeq:WP_000002591.1
vancomycin resistance histidine kinase VanS
COORDINATES: similar to AA sequence:RefSeq:WP_016127721.1
COORDINATES: similar to AA sequence:RefSeq:WP_014990779.1
COORDINATES: similar to AA sequence:RefSeq:WP_000511370.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002106912.1
COORDINATES: similar to AA sequence:RefSeq:WP_002035210.1
COORDINATES: similar to AA sequence:RefSeq:WP_016127765.1
COORDINATES: similar to AA sequence:RefSeq:WP_016128840.1
COORDINATES: similar to AA sequence:RefSeq:WP_001985716.1
COORDINATES: similar to AA sequence:RefSeq:WP_001280032.1
COORDINATES: similar to AA sequence:RefSeq:WP_016077730.1
COORDINATES: similar to AA sequence:RefSeq:WP_016081630.1
COORDINATES: similar to AA sequence:RefSeq:WP_002187121.1
COORDINATES: similar to AA sequence:RefSeq:WP_002016849.1
COORDINATES: similar to AA sequence:RefSeq:WP_000177844.1
COORDINATES: similar to AA sequence:RefSeq:WP_002189689.1
COORDINATES: similar to AA sequence:RefSeq:WP_000776933.1
deoxyuridine 5'-triphosphate nucleotidohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_002161907.1
COORDINATES: similar to AA sequence:RefSeq:WP_016096781.1
COORDINATES: similar to AA sequence:RefSeq:WP_000366661.1
COORDINATES: similar to AA sequence:RefSeq:WP_000521678.1
COORDINATES: similar to AA sequence:RefSeq:WP_001038415.1
COORDINATES: protein motif:HMM:NF040570.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000421889.1
COORDINATES: similar to AA sequence:RefSeq:WP_009334028.1
COORDINATES: similar to AA sequence:RefSeq:WP_000642190.1
COORDINATES: similar to AA sequence:RefSeq:WP_002161986.1
COORDINATES: similar to AA sequence:RefSeq:WP_000465342.1
COORDINATES: similar to AA sequence:RefSeq:WP_001275781.1
COORDINATES: similar to AA sequence:RefSeq:WP_000377604.1
COORDINATES: similar to AA sequence:RefSeq:WP_000428112.1
COORDINATES: similar to AA sequence:RefSeq:WP_000724391.1
COORDINATES: similar to AA sequence:RefSeq:WP_001271980.1
bifunctional lytic transglycosylase/C40 family peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_000733991.1
COORDINATES: similar to AA sequence:RefSeq:WP_002162132.1
COORDINATES: similar to AA sequence:RefSeq:WP_016100209.1
COORDINATES: similar to AA sequence:RefSeq:WP_002162134.1
TcpE family conjugal transfer membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_000421390.1
COORDINATES: similar to AA sequence:RefSeq:WP_000239377.1
COORDINATES: similar to AA sequence:RefSeq:WP_016514214.1
COORDINATES: similar to AA sequence:RefSeq:WP_014990768.1
COORDINATES: similar to AA sequence:RefSeq:WP_000413557.1
GO:0050661 - NADP binding [Evidence IEA]; GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:NP_391887.1
COORDINATES: similar to AA sequence:RefSeq:WP_000100541.1
GO:0019200 - carbohydrate kinase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000167476.1
gluconate operon transcriptional repressor GntR
COORDINATES: similar to AA sequence:RefSeq:WP_016514209.1
COORDINATES: similar to AA sequence:RefSeq:WP_001232166.1
COORDINATES: similar to AA sequence:RefSeq:WP_003193499.1
COORDINATES: similar to AA sequence:RefSeq:WP_002203170.1
TraM recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000748108.1
COORDINATES: similar to AA sequence:RefSeq:WP_014990764.1
COORDINATES: similar to AA sequence:RefSeq:WP_002203836.1
COORDINATES: similar to AA sequence:RefSeq:WP_002203167.1
COORDINATES: similar to AA sequence:RefSeq:WP_002187391.1
COORDINATES: similar to AA sequence:RefSeq:WP_000021189.1
COORDINATES: protein motif:HMM:TIGR04416.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_000533696.1
COORDINATES: similar to AA sequence:RefSeq:WP_002046616.1
COORDINATES: similar to AA sequence:RefSeq:WP_001180710.1
COORDINATES: similar to AA sequence:RefSeq:WP_001127670.1
COORDINATES: similar to AA sequence:RefSeq:WP_002004142.1
peptide ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_000926535.1
COORDINATES: similar to AA sequence:RefSeq:WP_048813205.1
COORDINATES: similar to AA sequence:RefSeq:WP_016096850.1
COORDINATES: similar to AA sequence:RefSeq:WP_003275109.1
COORDINATES: similar to AA sequence:RefSeq:NP_388412.1
COORDINATES: similar to AA sequence:RefSeq:WP_000132660.1
COORDINATES: similar to AA sequence:RefSeq:WP_000522783.1
COORDINATES: similar to AA sequence:RefSeq:WP_002175947.1
COORDINATES: similar to AA sequence:RefSeq:WP_000895162.1
COORDINATES: similar to AA sequence:RefSeq:WP_000565398.1
COORDINATES: similar to AA sequence:RefSeq:WP_000542581.1
COORDINATES: similar to AA sequence:RefSeq:WP_000473832.1
COORDINATES: similar to AA sequence:RefSeq:WP_001985744.1
COORDINATES: similar to AA sequence:RefSeq:WP_000473626.1
COORDINATES: similar to AA sequence:RefSeq:WP_000540749.1
COORDINATES: similar to AA sequence:RefSeq:WP_000362168.1
COORDINATES: similar to AA sequence:RefSeq:WP_002191419.1
COORDINATES: similar to AA sequence:RefSeq:WP_016081744.1
COORDINATES: similar to AA sequence:RefSeq:WP_000823702.1
COORDINATES: similar to AA sequence:RefSeq:WP_000135326.1
COORDINATES: similar to AA sequence:RefSeq:WP_002203141.1
COORDINATES: similar to AA sequence:RefSeq:WP_016105478.1
COORDINATES: similar to AA sequence:RefSeq:WP_001120954.1
COORDINATES: similar to AA sequence:RefSeq:WP_001142120.1
COORDINATES: similar to AA sequence:RefSeq:WP_016100079.1
COORDINATES: similar to AA sequence:RefSeq:WP_016097174.1
COORDINATES: protein motif:HMM:NF019139.2
Rho termination factor N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002016953.1
COORDINATES: similar to AA sequence:RefSeq:WP_016127783.1
COORDINATES: similar to AA sequence:RefSeq:WP_016130559.1
COORDINATES: similar to AA sequence:RefSeq:WP_003471583.1
COORDINATES: similar to AA sequence:RefSeq:WP_017154194.1
COORDINATES: similar to AA sequence:RefSeq:WP_017154193.1
COORDINATES: similar to AA sequence:RefSeq:WP_010348514.1
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: similar to AA sequence:RefSeq:WP_019240795.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019240796.1
COORDINATES: similar to AA sequence:RefSeq:WP_019393633.1
COORDINATES: similar to AA sequence:RefSeq:WP_000821262.1
COORDINATES: similar to AA sequence:RefSeq:WP_016086128.1
COORDINATES: similar to AA sequence:RefSeq:WP_000409218.1
COORDINATES: similar to AA sequence:RefSeq:WP_002161200.1
COORDINATES: similar to AA sequence:RefSeq:WP_000565428.1
COORDINATES: similar to AA sequence:RefSeq:WP_000505686.1
COORDINATES: similar to AA sequence:RefSeq:WP_016084107.1
COORDINATES: similar to AA sequence:RefSeq:WP_001021329.1
COORDINATES: similar to AA sequence:RefSeq:WP_001060551.1
COORDINATES: similar to AA sequence:RefSeq:WP_016113364.1
COORDINATES: similar to AA sequence:RefSeq:WP_016427974.1
GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]
putative protein N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_000508255.1
COORDINATES: similar to AA sequence:RefSeq:WP_016097948.1
COORDINATES: similar to AA sequence:RefSeq:WP_016126663.1
COORDINATES: similar to AA sequence:RefSeq:WP_000416932.1
COORDINATES: similar to AA sequence:RefSeq:WP_012593230.1
COORDINATES: similar to AA sequence:RefSeq:WP_000576719.1
thiol-activated cytolysin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002093862.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002106796.1
COORDINATES: similar to AA sequence:RefSeq:WP_000117008.1
COORDINATES: similar to AA sequence:RefSeq:WP_002120506.1
COORDINATES: similar to AA sequence:RefSeq:WP_000800965.1
COORDINATES: similar to AA sequence:RefSeq:WP_000791264.1
COORDINATES: similar to AA sequence:RefSeq:WP_001036986.1
GO:0004053 - arginase activity [Evidence IEA]
GO:0019547 - arginine catabolic process to ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001060356.1
COORDINATES: similar to AA sequence:RefSeq:WP_000546766.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016119235.1
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_016119237.1
COORDINATES: similar to AA sequence:RefSeq:WP_016102634.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000799644.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002162221.1
COORDINATES: similar to AA sequence:RefSeq:WP_002042388.1
COORDINATES: protein motif:HMM:NF020945.2
aspartyl-phosphate phosphatase Spo0E family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000734339.1
COORDINATES: similar to AA sequence:RefSeq:WP_011984107.1
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002144058.1
COORDINATES: similar to AA sequence:RefSeq:WP_001245416.1
COORDINATES: similar to AA sequence:RefSeq:WP_001188933.1
M6 family metalloprotease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000802597.1
COORDINATES: similar to AA sequence:RefSeq:WP_000059809.1
COORDINATES: similar to AA sequence:RefSeq:WP_000716629.1
COORDINATES: similar to AA sequence:RefSeq:WP_000791773.1
COORDINATES: similar to AA sequence:RefSeq:WP_013245260.1