Xyrauchen texanus mitochondrion, complete genome.
type: Entry
definition: Xyrauchen texanus mitochondrion, complete genome.
sequence version: NC_010234.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_010234.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Xyrauchen texanus (razorback sucker)
organism: Xyrauchen texanus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Catostomoidei; Catostomidae; Xyrauchen.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from EU265776.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16634
topology: circular
so has quality: SO_0000988
location: 1..16634
location: region:1-16634:1
RO_0002162: 154827

NC_010234
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Mitochondrial genomics of fishes
author: Adane, T.D.
author: Reneau, P.C.
author: Broughton, R.E.
journal: Unpublished

2
title: Direct Submission
author: Adane, T.D.
author: Reneau, P.C.
author: Broughton, R.E.
journal: Submitted (05-NOV-2007) Oklahoma Biological Survey, University of Oklahoma, 111 E Chesapeake St, Norman, OK 73019, USA

3
title: Direct Submission
journal: Submitted (01-AUG-2000) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16634:1
position: 16634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16634:1:source
so part of: sequence
organism: Xyrauchen texanus
organelle: mitochondrion
mol type: genomic DNA

154827
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Phe
so part of: sequence
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:region

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 154827
product: s-rRNA
note: 12S ribosomal RNA
so part of: sequence
location: 70..1019
location: region:70-1019:1
so has part: feature:70-1019:1:region

position:70:1
position: 70
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019:1
position: 1019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70-1019:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Val
so part of: sequence
location: 1020..1093
location: region:1020-1093:1
so has part: feature:1020-1093:1:region

position:1020:1
position: 1020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093:1
position: 1093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020-1093:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 154827
product: l-rRNA
note: 16S ribosomal RNA
so part of: sequence
location: 1094..2777
location: region:1094-2777:1
so has part: feature:1094-2777:1:region

position:1094:1
position: 1094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2777:1
position: 2777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094-2777:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2778..2854
location: region:2778-2854:1
so has part: feature:2778-2854:1:region

position:2778:1
position: 2778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2854:1
position: 2854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2778-2854:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: ND1
so part of: sequence
location: 2855..3829
location: region:2855-3829:1
so has part: feature:2855-3829:1:exon
subclass of: SO_0000010

5848370
type: Gene
SIO_000068: ncbigene

position:2855:1
position: 2855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3829:1
position: 3829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2855-3829:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MMNTLLTHLINPLAYIVPVLLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIADGLKLFIKEPIRPSTSSPFLFLAAPMLALTLAMTLWAPMPMPYPVADLNLGILFVLALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSIIIFSGGYTLQMFNVTQESIWLLVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPAIPELTAMNLMIKAALLSIVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVLWHVALPVAFAGLPPQL
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2855..3829
location: region:2855-3829:1
so has part: feature:2855-3829:1:exon

YP_001648877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2855-3829:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Ile
so part of: sequence
location: 3835..3911
location: region:3835-3911:1
so has part: feature:3835-3911:1:region

position:3835:1
position: 3835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3911:1
position: 3911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3835-3911:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Gln
so part of: sequence
location: complement(3909..3979)
location: region:3909-3979:-1
so has part: feature:3909-3979:-1:region

position:3909:-1
position: 3909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3979:-1
position: 3979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3909-3979:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Met
so part of: sequence
location: 3981..4049
location: region:3981-4049:1
so has part: feature:3981-4049:1:region

position:3981:1
position: 3981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4049:1
position: 4049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3981-4049:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: ND2
so part of: sequence
location: 4050..5096
location: region:4050-5096:1
so has part: feature:4050-5096:1:exon
subclass of: SO_0000010

5848379
type: Gene
SIO_000068: ncbigene

position:4050:1
position: 4050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5096:1
position: 5096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4050-5096:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: ND2
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYVLTILLSSLGLGTTLTFASSHWVLAWMGLEINTLAILPLMAQHHHPRAVEATTKYFLTQATAAAVILFASTTNAWLIGEWDINNLSHPLATTMAIAALALKIGLAPVHFWLPEVLQGLDLLTGLILSTWQKLAPFALIVQLAPTIDPMLLTMLGLASTLIGGWGGLNQTQLRKILAYSSIAHMGWMIIVSQYAPQLTLLALGTYVFMTSAAFLALKLSSATKISTLTMAWSKNPIMVITTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATMMALAALLSLYFYLRLCYAMTLTMHPNTVNSMAPWRTRSTQLTMPLALTTTIALGLLPLTPGILLMVS
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4050..5096
location: region:4050-5096:1
so has part: feature:4050-5096:1:exon

YP_001648878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4050-5096:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Trp
so part of: sequence
location: 5095..5167
location: region:5095-5167:1
so has part: feature:5095-5167:1:region

position:5095:1
position: 5095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5167:1
position: 5167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5095-5167:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Ala
so part of: sequence
location: complement(5170..5237)
location: region:5170-5237:-1
so has part: feature:5170-5237:-1:region

position:5170:-1
position: 5170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5237:-1
position: 5237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5170-5237:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Asn
so part of: sequence
location: complement(5239..5311)
location: region:5239-5311:-1
so has part: feature:5239-5311:-1:region

position:5239:-1
position: 5239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5311:-1
position: 5311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5239-5311:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Cys
so part of: sequence
location: complement(5344..5418)
location: region:5344-5418:-1
so has part: feature:5344-5418:-1:region

position:5344:-1
position: 5344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5418:-1
position: 5418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5344-5418:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Tyr
so part of: sequence
location: complement(5415..5487)
location: region:5415-5487:-1
so has part: feature:5415-5487:-1:region

position:5415:-1
position: 5415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5487:-1
position: 5487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5415-5487:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: COX1
so part of: sequence
location: 5489..7039
location: region:5489-7039:1
so has part: feature:5489-7039:1:exon
subclass of: SO_0000010

5848376
type: Gene
SIO_000068: ncbigene

position:5489:1
position: 5489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7039:1
position: 7039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5489-7039:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MAITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPAISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPLLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLHSTWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYALWNTVSSIGSLISLVAVIMFLFILWEAFAAKREVMSVELTATNVEWLHGCPPPYHTFEEPAFVQVQSN
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5489..7039
location: region:5489-7039:1
so has part: feature:5489-7039:1:exon

YP_001648879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5489-7039:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(7041..7111)
location: region:7041-7111:-1
so has part: feature:7041-7111:-1:region

position:7041:-1
position: 7041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7111:-1
position: 7111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7041-7111:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Asp
so part of: sequence
location: 7114..7187
location: region:7114-7187:1
so has part: feature:7114-7187:1:region

position:7114:1
position: 7114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7187:1
position: 7187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7114-7187:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: COX2
so part of: sequence
location: 7202..7892
location: region:7202-7892:1
so has part: feature:7202-7892:1:exon
subclass of: SO_0000010

5848369
type: Gene
SIO_000068: ncbigene

position:7202:1
position: 7202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7892:1
position: 7892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7202-7892:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7892,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPTQLGFQDAASPVMEELLHFHDHALMIVFLISTLVLYIIVAMVSTKLTNKYILDSQEIEIVWTVLPAVILILIALPSLRILYLMDEINDPHLTIKAMGHQWYWSYEYTDYEDLGFDSYMIPTQDLNPGQFRLLEADHRMVVPMESPIRVLVSAEDVLHSWAVPSLGVKMDAVPGRLNQTAFIASRPGVFYGQCSEICGANHSFMPIVVEAVPLEHFESWSSLMLEDA
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7202..7892
location: region:7202-7892:1
so has part: feature:7202-7892:1:exon

YP_001648880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7202-7892:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Lys
so part of: sequence
location: 7893..7968
location: region:7893-7968:1
so has part: feature:7893-7968:1:region

position:7893:1
position: 7893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7968:1
position: 7968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7893-7968:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: ATP8
so part of: sequence
location: 7970..8137
location: region:7970-8137:1
so has part: feature:7970-8137:1:exon
subclass of: SO_0000010

5848367
type: Gene
SIO_000068: ncbigene

position:7970:1
position: 7970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8137:1
position: 8137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7970-8137:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPTPWFAILVFSWVIFLTIIPTKVLNHISPNEPTPVSAEKHKTESWDWPWQ
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7970..8137
location: region:7970-8137:1
so has part: feature:7970-8137:1:exon

YP_001648881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7970-8137:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: ATP6
so part of: sequence
location: 8128..8814
location: region:8128-8814:1
so has part: feature:8128-8814:1:exon
subclass of: SO_0000010

5848374
type: Gene
SIO_000068: ncbigene

position:8128:1
position: 8128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8814:1
position: 8814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8128-8814:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MAMSFFDQFREPILPGSTPDCYRNRPTLSTLPPHHPHDELTNRLITIQGWLINRFTSQLMLPLNVGGHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 8128..8814
location: region:8128-8814:1
so has part: feature:8128-8814:1:exon

YP_001648882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8128-8814:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: COX3
so part of: sequence
location: 8814..9599
location: region:8814-9599:1
so has part: feature:8814-9599:1:exon
subclass of: SO_0000010

5848372
type: Gene
SIO_000068: ncbigene

position:9599:1
position: 9599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8814-9599:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: COX3
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAYHMVDPSPWPLTGAIAALLLTSGLAIWFHFHSTTLMTLGLVLTILTMYQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGITTLDPFEVPLLNTAVLLASGVTVTWAHHSLMEGERKQAIQSLTLTIILGLYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQIQYHFTSEHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8814..9599
location: region:8814-9599:1
so has part: feature:8814-9599:1:exon

YP_001648883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8814-9599:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Gly
so part of: sequence
location: 9599..9670
location: region:9599-9670:1
so has part: feature:9599-9670:1:region

position:9670:1
position: 9670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9599-9670:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: ND3
so part of: sequence
location: 9671..10021
location: region:9671-10021:1
so has part: feature:9671-10021:1:exon
subclass of: SO_0000010

5848375
type: Gene
SIO_000068: ncbigene

position:9671:1
position: 9671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10021:1
position: 10021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9671-10021:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: ND3
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLVITILFITMILSSVLAVVSFWLPQMTPDAEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLHTPTGTFFWATTVLILLTLGLIYEWTQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9671..10021
location: region:9671-10021:1
so has part: feature:9671-10021:1:exon

YP_001648884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9671-10021:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Arg
so part of: sequence
location: 10020..10089
location: region:10020-10089:1
so has part: feature:10020-10089:1:region

position:10020:1
position: 10020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10089:1
position: 10089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10020-10089:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: ND4L
so part of: sequence
location: 10090..10386
location: region:10090-10386:1
so has part: feature:10090-10386:1:exon
subclass of: SO_0000010

5848368
type: Gene
SIO_000068: ncbigene

position:10090:1
position: 10090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10386:1
position: 10386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10090-10386:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPVHFSFSSAFVLGLMGLAFHRTHLLSALLCLEGMMLSLFIALALWALQFESTGFSAAPMLLLAFSACEASAGLALLVATARTHGTDRLQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 10090..10386
location: region:10090-10386:1
so has part: feature:10090-10386:1:exon

YP_001648885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10090-10386:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: ND4
so part of: sequence
location: 10380..11760
location: region:10380-11760:1
so has part: feature:10380-11760:1:exon
subclass of: SO_0000010

5848373
type: Gene
SIO_000068: ncbigene

position:10380:1
position: 10380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11760:1
position: 11760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10380-11760:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11760,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKVLIPTIMLFPTIWISSPKWLWTTTTAHSLLIALISLTWLKWTSEAGWTASNMYLATDPLSTPLLVLTCWLLPLMILASQNHINPEPVNRQRLYISLLVSLQAFLIMAFGATELIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMMILQYSQPLTLESWGHKFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGAIILMIAHGLISSALFCLANTAYERTHSRTMVLARGLQMIFPLTAVWWFAANLANLALPPLPNLMGELMIITSLFSWSPWTIALTGVGTLITAGYSLYLFLMSQRGPTPNHIVGLPPFHTREHLLMVMHLIPVVLLITKPELMWGWCY
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10380..11760
location: region:10380-11760:1
so has part: feature:10380-11760:1:exon

YP_001648886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10380-11760:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-His
so part of: sequence
location: 11762..11831
location: region:11762-11831:1
so has part: feature:11762-11831:1:region

position:11762:1
position: 11762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11831:1
position: 11831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11762-11831:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 11832..11899
location: region:11832-11899:1
so has part: feature:11832-11899:1:region

position:11832:1
position: 11832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11899:1
position: 11899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11832-11899:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 11901..11973
location: region:11901-11973:1
so has part: feature:11901-11973:1:region

position:11901:1
position: 11901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11973:1
position: 11973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11901-11973:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: ND5
so part of: sequence
location: 11974..13812
location: region:11974-13812:1
so has part: feature:11974-13812:1:exon
subclass of: SO_0000010

5848377
type: Gene
SIO_000068: ncbigene

position:11974:1
position: 11974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13812:1
position: 13812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11974-13812:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MYPTTLILSSSLILVITILIYPLLTTLNRKTQSSEWAATHVKMAVNSAFLISLFPLTIFLDQGAESIVTNWHWMNTNTFDINISFKFDHYSIIFTPIALYVTWSILEFALWYMHSDPYVNRFFKYLLFFLVAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRVGDIGLILSMAWLAMNLNSWEIQQIFLLSKDFDMTIPLVGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNPLALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHNLMPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALILTLIATSFTAVYSFRVVFFVTMGSPRFLPLSPINENNPLVINPIKRLAWGSIVAGSIITLNFLPTKTQVMTMPVVLKLAALTVTIIGLLVAIELSTLTNKQFKVTPTTSLHHFSNMLGYFPTTVHRVAPKLNLVLGQTIATQLVDQAWFETIGPKSLASTQIKMAKNISDSQRGMIKTYLTIFLLTTALAVLFTFI
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11974..13812
location: region:11974-13812:1
so has part: feature:11974-13812:1:exon

YP_001648887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11974-13812:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: ND6
so part of: sequence
location: complement(13809..14330)
location: region:13809-14330:-1
so has part: feature:13809-14330:-1:exon
subclass of: SO_0000010

5848371
type: Gene
SIO_000068: ncbigene

position:13809:-1
position: 13809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14330:-1
position: 14330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13809-14330:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTYLVSLLLLALVVGLVAVASNPAPYFAAFGLVVAAGVGCGVLAGHGGSFLSLVLFLIYLGGMLVVFAYSAALAAEPFPEAWGDRSVIGYVLIYVLGVGLVGGMFWETWYEGSWLVIDNMKEFSMLRGDTSGVAVMYSSGGGMLVICAWVLLLTLFVVLELTRGLSRGALRAV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13809..14330)
location: region:13809-14330:-1
so has part: feature:13809-14330:-1:exon

YP_001648888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13809-14330:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Glu
so part of: sequence
location: complement(14331..14399)
location: region:14331-14399:-1
so has part: feature:14331-14399:-1:region

position:14331:-1
position: 14331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14399:-1
position: 14399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14331-14399:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 154827
gene: CYTB
so part of: sequence
location: 14404..15544
location: region:14404-15544:1
so has part: feature:14404-15544:1:exon
subclass of: SO_0000010

5848378
type: Gene
SIO_000068: ncbigene

position:14404:1
position: 14404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15544:1
position: 15544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14404-15544:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 154827
gene: CYTB
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15544,aa:TERM)
transl table: 2
product: cytochrome b
translation: MASLRKTHPLIKIANDALVDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVSYGWLIRSVHANGASFFFICIYMHIARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNELVQWIWGGFSVDNATLTRFFAFHFLLPFVVAAATIIHLLFLHETGSNNPAGINSDADKISFHPYFSYKDLLGFAAMLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLSSILVLMVVPVLHTSKQRGLTFRPATQFLFWTLVADMIILTWIGGMPVEHPFIVIGQVASALYFALFLILTPLAGWLENKALEWA
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14404..15544
location: region:14404-15544:1
so has part: feature:14404-15544:1:exon

YP_001648889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14404-15544:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Thr
so part of: sequence
location: 15545..15616
location: region:15545-15616:1
so has part: feature:15545-15616:1:region

position:15545:1
position: 15545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15616:1
position: 15616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15545-15616:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 154827
product: tRNA-Pro
so part of: sequence
location: complement(15615..15687)
location: region:15615-15687:-1
so has part: feature:15615-15687:-1:region

position:15615:-1
position: 15615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15687:-1
position: 15687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15615-15687:-1:region